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Isolation and characterisation of new R-protein variants encoded at the barley Mla locus that specify resistance against the fungus powdery mildew


Seeholzer, S. Isolation and characterisation of new R-protein variants encoded at the barley Mla locus that specify resistance against the fungus powdery mildew. 2009, University of Zurich, Faculty of Science.

Abstract

The Mla locus in barley (Hordeum vulgare ssp. vulgare) contains a large number of alleles with distinct recognition specificities against isolates of the fungal pathogen powdery mildew (Blumeria graminis f. sp. hordei). Classical genetic studies have found more than 30 Mla specificities in different barley cultivars. Previously, only six Mla alleles have been isolated and characterised at the molecular level. We isolated and characterised 23 new Mla sequences designated as candidate MLA cDNAs using a PCRbased approach. Thus, Mla currently contains a total of 29 different variants. Functional activity was demonstrated for 13 of the 23 candidate MLA cDNAs. Four Mla sequences encoded N-terminal coiled-coil (CC) regions that differed significantly from the Nterminus conserved among the other 25 MLA proteins. The MLA proteins are highly polymorphic in the C-terminal LRR (leucine-rich repeat) domain. Investigation of this region revealed 30 positively selected sites that lie mostly in the variable x positions of the 15 LxxLxLxx motifs. As the LRR domain is possibly determining recognition specificity, the large diversity of MLA will help to precisely identify the sequence requirements for the detection of the pathogenic effector proteins.

The Mla locus in barley (Hordeum vulgare ssp. vulgare) contains a large number of alleles with distinct recognition specificities against isolates of the fungal pathogen powdery mildew (Blumeria graminis f. sp. hordei). Classical genetic studies have found more than 30 Mla specificities in different barley cultivars. Previously, only six Mla alleles have been isolated and characterised at the molecular level. We isolated and characterised 23 new Mla sequences designated as candidate MLA cDNAs using a PCRbased approach. Thus, Mla currently contains a total of 29 different variants. Functional activity was demonstrated for 13 of the 23 candidate MLA cDNAs. Four Mla sequences encoded N-terminal coiled-coil (CC) regions that differed significantly from the Nterminus conserved among the other 25 MLA proteins. The MLA proteins are highly polymorphic in the C-terminal LRR (leucine-rich repeat) domain. Investigation of this region revealed 30 positively selected sites that lie mostly in the variable x positions of the 15 LxxLxLxx motifs. As the LRR domain is possibly determining recognition specificity, the large diversity of MLA will help to precisely identify the sequence requirements for the detection of the pathogenic effector proteins.

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Additional indexing

Item Type:Dissertation
Referees:Keller B, Dudler R, Martinoia E
Communities & Collections:07 Faculty of Science > Department of Plant and Microbial Biology
Dewey Decimal Classification:580 Plants (Botany)
Language:English
Date:2009
Deposited On:18 Feb 2010 19:05
Last Modified:05 Apr 2016 13:57
Number of Pages:129
Related URLs:http://opac.nebis.ch/F/?local_base=NEBIS&con_lng=GER&func=find-b&find_code=SYS&request=005909506
Permanent URL: https://doi.org/10.5167/uzh-31283

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