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Number of items: 30.

Dev Singh, Kapil; Milstein, Stuart; Zheng, Xue; Keller, Martin; Grossmann, Jonas; Roschitzki, Bernd; Hengartner, Michael O (2017). Differential regulation of germ line apoptosis and germ cell differentiation by CPEB family members in C. elegans. PLoS ONE, 12(7):e0182270.

Casanova, Ruben; Xia, Daniel; Rulle, Undīne; Nanni, Paolo; Grossmann, Jonas; Vrugt, Bart; Wettstein, Reto; Ballester, Rafael; Astolfo, Alberto; Weder, Walter; Moch, Holger; Stampanoni, Marco; Beck, Andrew H; Soltermann, Alex (2017). Morphoproteomic characterization of lung squamous cell carcinoma fragmentation, a histological marker of increased tumor invasiveness. Cancer Research, 77(10):2585-2593.

Grossmann, Jonas; Fernández, Helena; Chaubey, Pururawa M; Valdés, Ana E; Gagliardini, Valeria; Cañal, María J; Russo, Giancarlo; Grossniklaus, Ueli (2017). Proteogenomic analysis greatly expands the identification of proteins related to reproduction in the apogamous fern dryopteris affinis ssp. affinis. Frontiers in Plant Science, 8:336.

Almeida, André M; Nanni, Paolo; Ferreira, Ana M; Fortes, Claudia; Grossmann, Jonas; Bessa, Rui J B; Costa, Paulo (2017). The longissimus thoracis muscle proteome in Alentejana bulls as affected by growth path. Journal of Proteomics, 152:206-215.

Uzozie, Anuli Christiana; Selevsek, Nathalie; Wahlander, Asa; Nanni, Paolo; Grossmann, Jonas; Weber, Achim; Buffoli, Federico; Marra, Giancarlo (2017). Targeted proteomics for multiplexed verification of markers of colorectal tumorigenesis. Molecular & Cellular Proteomics:1-48.

Klobučar, Marko; Sedić, Mirela; Gehrig, Peter; Grossmann, Jonas; Bilić, Mario; Kovač-Bilić, Lana; Pavelić, Krešimir; Kraljević Pavelić, Sandra (2016). Basement membrane protein ladinin-1 and the MIF-CD44-β1 integrin signaling axis are implicated in laryngeal cancer metastasis. BBA - Biochimica et Biophysica Acta, 1862(10):1938-1954.

Gapp, Katharina; Bohacek, Johannes; Grossmann, Jonas; Brunner, Andrea M; Manuella, Francesca; Nanni, Paolo; Mansuy, Isabelle M (2016). Potential of environmental enrichment to prevent transgenerational effects of paternal trauma. Neuropsychopharmacology, 41(11):2749-2758.

Pfrunder, Stefanie; Grossmann, Jonas; Hunziker, Peter; Brunisholz, René; Gekenidis, Maria-Theresia; Drissner, David (2016). Bacillus cereus Group-Type Strain-Specific Diagnostic Peptides. Journal of Proteome Research, 15(9):3098-107.

Hernández-Castellano, Lorenzo E; Ferreira, Ana M; Nanni, Paolo; Grossmann, Jonas; Argüello, Anastasio; Capote, Juan; Cai, Guohong; Lippolis, John; Castro, Noemí; de Almeida, Andre M (2016). The goat (Capra hircus) mammary gland secretory tissue proteome as influenced by weight loss: A study using label free proteomics. Journal of Proteomics, 145:60-69.

Fascellaro, Giuseppina; Petrera, Agnese; Lai, Zon Weng; Nanni, Paolo; Grossmann, Jonas; Burger, Sibylle; Biniossek, Martin L; Gomez-Auli, Alejandro; Schilling, Oliver; Imkamp, Frank (2016). Comprehensive proteomic analysis of nitrogen-starved mycobacterium smegmatis δpup reveals the impact of pupylation on nitrogen stress response. Journal of Proteome Research, 15(8):2812-2825.

Kockmann, Tobias; Trachsel, Christian; Panse, Christian; Wahlander, Asa; Selevsek, Nathalie; Grossmann, Jonas; Wolski, Witold E; Schlapbach, Ralph (2016). Targeted proteomics coming of age - SRM, PRM and DIA performance evaluated from a core facility perspective. Proteomics, 16(15-16):2183-2192.

Oktay, Yavuz; Ülgen, Ege; Can, Özge; Akyerli, Cemaliye B; Yüksel, Şirin; Erdemgil, Yiğit; Durası, I Melis; Henegariu, Octavian Ioan; Nanni, E Paolo; Selevsek, Nathalie; Grossmann, Jonas; Erson-Omay, E Zeynep; Bai, Hanwen; Gupta, Manu; Lee, William; Turcan, Şevin; Özpınar, Aysel; Huse, Jason T; Sav, M Aydın; Flanagan, Adrienne; Günel, Murat; Sezerman, O Uğur; Yakıcıer, M Cengiz; Pamir, M Necmettin; Özduman, Koray (2016). IDH-mutant glioma specific association of rs55705857 located at 8q24.21 involves MYC deregulation. Scientific Reports, 6:27569.

Kamkina, Polina; Snoek, L Basten; Grossmann, Jonas; Volkers, Rita J M; Sterken, Mark G; Daube, Michael; Roschitzki, Bernd; Fortes, Claudia; Schlapbach, Ralph; Roth, Alexander; von Mering, Christian; Hengartner, Michael O; Schrimpf, Sabine P; Kammenga, Jan E (2016). Natural genetic variation differentially affects the proteome and transcriptome in Caenorhabditis elegans. Molecular & Cellular Proteomics, 15(5):1670-1680.

Singh, Kapil Dev; Roschitzki, Bernd; Snoek, L. Basten; Grossmann, Jonas; Zheng, Xue; Elvin, Mark; Kamkina, Polina; Schrimpf, Sabine P; Poulin, Gino B; Kammenga, Jan E; Hengartner, Michael O (2016). Natural genetic variation influences protein abundances in C. elegans developmental signalling pathways. PLoS ONE, 11(3):e0149418.

Milleret, Vincent; Buzzi, Stefano; Gehrig, Peter; Ziogas, Algirdas; Grossmann, Jonas; Schilcher, Katrin; Zinkernagel, Annelies S; Zucker, Arik; Ehrbar, Martin (2015). Protein adsorption steers blood contact activation on engineered cobalt chromium alloy oxide layers. Acta Biomaterialia, 24:343-351.

Gámez-Pozo, Angelo; Berges-Soria, Julia; Arevalillo, Jorge M; Nanni, Paolo; López-Vacas, Rocío; Navarro, Hilario; Grossmann, Jonas; Castaneda, Carlos A; Main, Paloma; Díaz-Almirón, Mariana; Espinosa, Enrique; Ciruelos, Eva; Fresno Vara, Juan Ángel (2015). Combined Label-Free Quantitative Proteomics and microRNA Expression Analysis of Breast Cancer Unravel Molecular Differences with Clinical Implications. Cancer Research, 75(11):2243-2253.

Panse, Christian; Trachsel, Christian; Grossmann, Jonas; Schlapbach, Ralph (2015). specL - An R/Bioconductor package to prepare peptide spectrum matches for use in targeted proteomics. Bioinformatics, 31(13):2228-2231.

Bao, Kai; Belibasakis, Georgios N; Selevsek, Nathalie; Grossmann, Jonas; Bostanci, Nagihan (2015). Proteomic profiling of host-biofilm interactions in an oral infection model resembling the periodontal pocket. Scientific Reports, 5:15999.

Trachsel, Christian; Panse, Christian; Grossmann, Jonas (2014). specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics. Bioconductor R Package v1.1.13 Bioc 3.0, University of Zurich.

Kentner, David; Martano, Giuseppe; Callon, Morgane; Chiquet, Petra; Brodmann, Maj; Burton, Olga; Wahlander, Asa; Nanni, Paolo; Delmotte, Nathanaël; Grossmann, Jonas; Limenitakis, Julien; Schlapbach, Ralph; Kiefer, Patrick; Vorholt, Julia A; Hiller, Sebastian; Bumann, Dirk (2014). Shigella reroutes host cell central metabolism to obtain high-flux nutrient supply for vigorous intracellular growth. Proceedings of the National Academy of Sciences of the United States of America, 111(27):9929-9934.

Vanderschuren, Hervé; Nyaboga, Evans; Poon, Jacquelyne S; Baerenfaller, Katja; Grossmann, Jonas; Hirsch-Hoffmann, Matthias; Kirchgessner, Norbert; Nanni, Paolo; Gruissem, Wilhelm (2014). Large-Scale Proteomics of the Cassava Storage Root and Identification of a Target Gene to Reduce Postharvest Deterioration. Plant Cell, 26(5):1913-1924.

Müller, Jonas E N; Litsanov, Boris; Bortfeld-Miller, Miriam; Trachsel, Christian; Grossmann, Jonas; Brautaset, Trygve; Vorholt, Julia A (2014). Proteomic analysis of the thermophilic methylotroph Bacillus methanolicus MGA3. Proteomics, 14(6):725-37.

Warinner, Christina; Rodrigues, João F Matias; Vyas, Rounak; Trachsel, Christian; Shved, Natallia; Grossmann, Jonas; Radini, Anita; Hancock, Y; Tito, Raul Y; Fiddyment, Sarah; Speller, Camilla; Hendy, Jessica; Charlton, Sophy; Luder, Hans Ulrich; Salazar-García, Domingo C; Eppler, Elisabeth; Seiler, Roger; Hansen, Lars H; Castruita, José Alfredo Samaniego; Barkow-Oesterreicher, Simon; Teoh, Kai Yik; Kelstrup, Christian D; Olsen, Jesper V; Nanni, Paolo; Kawai, Toshihisa; Willerslev, Eske; von Mering, Christian; Lewis, Cecil M; Collins, Matthew J; Gilbert, M Thomas P; Rühli, Frank J; Cappellini, Enrico (2014). Pathogens and host immunity in the ancient human oral cavity. Nature Genetics, 46(4):336-344.

Uzozie, Anuli; Nanni, Paolo; Staiano, Teresa; Grossmann, Jonas; Barkow-Oesterreicher, Simon; Shay, Jerry W; Tiwari, Amit; Buffoli, Federico; Laczko, Endre; Marra, Giancarlo (2014). Sorbitol dehydrogenase overexpression and other aspects of dysregulated protein expression in human precancerous colorectal neoplasms: a quantitative proteomics study. Molecular & Cellular Proteomics, 13(5):1198-1218.

Trinh, Hung V; Grossmann, Jonas; Gehrig, Peter; Roschitzki, Bernd; Schlapbach, Ralph; Greber, Urs F; Hemmi, Silvio (2013). iTRAQ-based and label-free proteomics approaches for studies of human adenovirus infections. International Journal of Proteomics, 2013:581862.

Weisser, Hendrik; Nahnsen, Sven; Grossmann, Jonas; Nilse, Lars; Quandt, Andreas; Brauer, Hendrik; Sturm, Marc; Kenar, Erhan; Kohlbacher, Oliver; Aebersold, Ruedi; Malmström, Lars (2013). An automated pipeline for high-throughput label-free quantitative proteomics. Journal of Proteome Research, 12(4):1628-1644.

Nanni, Paolo; Panse, Christian; Gehrig, Peter; Mueller, Susanne; Grossmann, Jonas; Schlapbach, Ralph (2013). PTM MarkerFinder, a software tool to detect and validate spectra from peptides carrying post-translational modifications. Proteomics, 13(15):2251-2255.

Tweedie-Cullen, Ry Y; Brunner, Andrea M; Grossmann, Jonas; Mohanna, Safa; Sichau, David; Nanni, Paolo; Panse, Christian; Mansuy, Isabelle M (2012). Identification of combinatorial patterns of post-translational modifications on individual histones in the mouse brain. PLoS ONE, 7(5):e36980.

Trachsel, Christian; Siegemund, Doreen; Kämpfer, Urs; Kopp, Lukas S; Bühr, Claudia; Grossmann, Jonas; Lüthi, Christoph; Cunningham, Monica; Nentwig, Wolfgang; Kuhn-Nentwig, Lucia; Schürch, Stefan; Schaller, Johann (2012). Multicomponent venom of the spider Cupiennius salei: a bioanalytical investigation applying different strategies. FEBS Journal, 279(15):2683-2694.

Bischof, Sylvain; Grossmann, Jonas; Gruissem, Wilhelm (2012). Proteomics and its application in plant biotechnology. In: Altman, Arie; Hasegawa, Paul Michael. Plant Biotechnology and Agriculture. Prospects for the 21st Century. San Diego: Academic Press, 55-65.

This list was generated on Sat Jul 21 12:13:23 2018 CEST.