Header

UZH-Logo

Maintenance Infos

Browse by Creators

Navigate back| Up a level
Export as
Number of items: 24.

Okoniewski, M J; Lesniewska, A; Szabelska, A; Zyprych-Walczak, J; Ryan, M; Wachtel, M; Morzy, T; Schäfer, B; Schlapbach, R (2012). Preferred analysis methods for single genomic regions in RNA sequencing revealed by processing the shape of coverage. Nucleic Acids Research, 40(9):e63.

Türker, C; Akal, F; Schlapbach, R (2011). Life sciences data and application integration with B-fabric. Journal of Integrative Bioinformatics, 8(2):159.

Craig, V J; Cogliatti, S B; Imig, J; Renner, C; Neuenschwander, S; Rehrauer, H; Schlapbach, R; Dirnhofer, S; Tzankov, A; Müller, A (2011). Myc-mediated repression of microRNA-34a promotes high grade transformation of B-cell lymphoma by dysregulation of FoxP1. Blood, 117(23):6227-6236.

Türker, C; Akal, F; Joho, D; Panse, C; Barkow-Oesterreicher, S; Rehrauer, H; Schlapbach, R (2010). B-Fabric: the Swiss Army Knife for life sciences. In: Proceedings of the 13th International Conference on Extending Database Technology, Lausanne, Switzerland, 22 March 2010 - 26 March 2010, 717-720.

Grossmann, J; Roschitzki, B; Panse, C; Fortes, C; Barkow-Oesterreicher, S; Rutishauser, D; Schlapbach, R (2010). Implementation and evaluation of relative and absolute quantification in shotgun proteomics with label-free methods. Journal of Proteomics, 73(9):1740-1746.

Bodenmiller, B; Wanka, S; Kraft, C; Urban, J; Campbell, D; Pedrioli, P G; Gerrits, B; Picotti, P; Lam, H; Vitek, O; Brusniak, M Y; Roschitzki, B; Zhang, C; Shokat, K M; Schlapbach, R; Colman-Lerner, A; Nolan, G P; Nesvizhskii, A I; Peter, M; Loewith, R; von Mering, C; Aebersold, R (2010). Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast. Science Signaling, 3(153):rs4.

Delmotte, N; Knief, C; Chaffron, S; Innerebner, G; Roschitzki, B; Schlapbach, R; von Mering, C; Vorholt, J A (2009). Community proteogenomics reveals insights into the physiology of phyllosphere bacteria. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 106(38):16428-16433.

Türker, C; Akal, F; Joho, D; Schlapbach, R (2009). B-fabric: An open source life sciences data management system. Lecture Notes in Computer Science, 5566:185-190.

Duc, L; Neuenschwander, S; Rehrauer, H; Wagner, U; Sobek, J; Schlapbach, R; Zeyer, J (2009). Development and experimental validation of a nifH oligonucleotide microarray to study diazotrophic communities in a glacier forefield. Environmental Microbiology, 11(8):2179-2189.

Gehrig, P M; Roschitzki, B; Rutishauser, D; Reiland, S; Schlapbach, R (2009). Phosphorylated serine and threonine residues promote site-specific fragmentation of singly charged, arginine-containing peptide ions. Rapid Communications in Mass Spectrometry, 23(10):1435-1445.

Rehrauer, H; Schönmann, S; Eberl, L; Schlapbach, R (2008). PhyloDetect: a likelihood-based strategy for detecting microorganisms with diagnostic microarrays. Bioinformatics, 24(16):i83-i89.

Kraljevic Pavelic, S; Sedic, M; Hock, K; Vucinic, S; Jurisic, D; Gehrig, P; Scott, M; Schlapbach, R; Cacev, T; Kapitanovic, S; Pavelic, K (2008). An integrated proteomics approach for studying the molecular pathogenesis of Dupuytren's disease. Journal of Pathology, 217(4):524-533.

Sedic, M; Poznic, M; Gehrig, P; Scott, M; Schlapbach, R; Hranjec, M; Karminski-Zamola, G; Pavelic, K; Kraljevic Pavelic, S (2008). Differential antiproliferative mechanisms of novel derivative of benzimidazo[1,2-alpha]quinoline in colon cancer cells depending on their p53 status. Molecular Cancer Therapeutics, 7(7):2121-2132.

Bodenmiller, B; Campbell, D; Gerrits, B; Lam, H; Jovanovic, M; Picotti, P; Schlapbach, R; Aebersold, R (2008). PhosphoPep--a database of protein phosphorylation sites in model organisms. Nature Biotechnology, 26(12):1339-1340.

Potthast, F; Gerrits, B; Häkkinen, J; Rutishauser, D; Ahrens, C H; Roschitzki, B; Baerenfaller, K; Munton, R P; Walther, P; Gehrig, P; Seif, P; Seeberger, P H; Schlapbach, R (2007). The Mass Distance Fingerprint: a statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry. Journal of Chromatography B, 854(1-2):173-182.

Rehrauer, H; Zoller, S; Schlapbach, R (2007). MAGMA: analysis of two-channel microarrays made easy. Nucleic Acids Research, 35(Web Se):W86-90.

Munton, R P; Tweedie-Cullen, R; Livingstone-Zatchej, M; Weinandy, F; Waidelich, M; Longo, D; Gehrig, P; Potthast, F; Rutishauser, D; Gerrits, B; Panse, C; Schlapbach, R; Mansuy, I M (2007). Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations. Molecular & Cellular Proteomics, 6(2):283-293.

Brunner, E; Ahrens, C H; Mohanty, S; Baetschmann, H; Loevenich, S; Potthast, F; Deutsch, E W; Panse, C; de Lichtenberg, U; Rinner, O; Lee, H; Pedrioli, P G A; Malmstrom, J; Koehler, K; Schrimpf, S; Krijgsveld, J; Kregenow, F; Heck, A J R; Hafen, E; Schlapbach, R; Aebersold, R (2007). A high-quality catalog of the Drosophila melanogaster proteome. Nature Biotechnology, 25(5):576-583.

Cannavo, E; Gerrits, B; Marra, G; Schlapbach, R; Jiricny, J (2007). Characterization of the interactome of the human MutL homologues MLH1, PMS1, and PMS. Journal of Biological Chemistry, 282(5):2976-86.

Bodenmiller, B; Malmstrom, J; Gerrits, B; Campbell, D; Lam, H; Schmidt, A; Rinner, O; Mueller, L N; Shannon, P T; Pedrioli, P G; Panse, C; Lee, H K; Schlapbach, R; Aebersold, R (2007). PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells. Molecular Systems Biology, 3:139.

Cai, H; Gehrig, P; Scott, T M; Zimmermann, R; Schlapbach, R; Zisch, A H (2006). MnSOD marks cord blood late outgrowth endothelial cells and accompanies robust resistance to oxidative stress. Biochemical and Biophysical Research Communications (BBRC), 350(2):364-369.

Kraljevic, S; Sedic, M; Scott, M; Gehrig, P; Schlapbach, R; Pavelic, K (2006). Casting light on molecular events underlying anti-cancer drug treatment: what can be seen from the proteomics point of view? Cancer Treatment Reviews, 32(8):619-629.

Gressmann, H; Linz, B; Ghai, R; Pleissner, K P; Schlapbach, R; Yamaoka, Y; Kraft, C; Suerbaum, S; Meyer, T F; Achtman, M (2005). Gain and loss of multiple genes during the evolution of Helicobacter pylori. PLoS Genetics, 1(4):e43.

Malipiero, U; Heuss, C; Schlapbach, R; Tschopp, J; Gerber, U; Fontana, A (1999). Involvement of the N-methyl-D-aspartate receptor in neuronal cell death induced by cytotoxic T cell-derived secretory granules. European Journal of Immunology, 29(10):3053-3062.

This list was generated on Sun Oct 22 07:14:34 2017 CEST.