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Hatakeyama, Masaomi; Aluri, Sirisha; Balachadran, Mathi Thumilan; Sivarajan, Sajeevan Radha; Patrignani, Andrea; Grüter, Simon; Poveda, Lucy; Shimizu-Inatsugi, Rie; Baeten, John; Francoijs, Kees-Jan; Nataraja, Karaba N; Reddy, Yellodu A Nanja; Phadnis, Shamprasad; Ravikumar, Ramapura L; Schlapbach, Ralph; Sreeman, Sheshshayee M; Shimizu, Kentaro K (2017). Multiple hybrid de novo genome assembly of finger millet, an orphan allotetraploid crop. DNA Research:Epub ahead of print.

Takada, Yoshinobu; Murase, Kohji; Shimosato-Asano, Hiroko; Sato, Takahiro; Nakanishi, Honoka; Suwabe, Keita; Shimizu, Kentaro K; Lim, Yong Pyo; Takayama, Seiji; Suzuki, Go; Watanabe, Masao (2017). Duplicated pollen–pistil recognition loci control intraspecific unilateral incompatibility in Brassica rapa. Nature Plants, (3):17096.

Endo, Tomoyuki; Shimizu, Kentaro K. Examination of cutting-edge research institutes. In: Nikkei Sangyou Shimbun (Japan Economy Industry Newspaper), 30 January 2017, p.010.

Izuno, Ayako; Kitayama, Kanehiro; Onoda, Yusuke; Tsujii, Yuki; Hatakeyama, Masaomi; Nagano, Atsushi J; Honjo, Mie N; Shimizu-Inatsugi, Rie; Kudoh, Hiroshi; Shimizu, Kentaro K; Isagi, Yuji (2017). The population genomic signature of environmental association and gene flow in an ecologically divergent tree species Metrosideros polymorpha (Myrtaceae). Molecular Ecology, 26(6):1515-1532.

Fischer, Martin C; Rellstab, Christian; Leuzinger, Marianne; Roumet, Marie; Gugerli, Felix; Shimizu, Kentaro K; Holderegger, Rolf; Widmer, Alex (2017). Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri. BMC Genomics, 18(1):69.

Ang, Cheng Choon; O’Brien, Michael John; Ng, Kevin Kit Siong; Lee, Ping Chin; Hector, Andy; Schmid, Bernhard; Shimizu, Kentaro K (2017). Genetic diversity of two tropical tree species of the Dipterocarpaceae following logging and restoration in Borneo: high genetic diversity in plots with high species diversity. Plant Ecology and Diversity, 9(5-6):459-469.

Rellstab, C; Fischer, M C; Zoller, S; Graf, R; Tedder, Andrew; Shimizu, Kentaro K; Widmer, A; Holderegger, R; Gugerli, F (2017). Local adaptation (mostly) remains local: reassessing environmental associations of climate-related candidate SNPs in Arabidopsis halleri. Heredity, 118(2):193-201.

Briskine, Roman V; Shimizu, Kentaro K (2017). Positional bias in variant calls against draft reference assemblies. BMC Genomics, 18(1):263.

Izuno, Ayako; Hatakeyama, Masaomi; Nishiyama, Tomoaki; Tamaki, Ichiro; Shimizu-Inatsugi, Rie; Sasaki, Ryuta; Shimizu, Kentaro K; Isagi, Yuji (2016). Genome sequencing of Metrosideros polymorpha (Myrtaceae), a dominant species in various habitats in the Hawaiian Islands with remarkable phenotypic variations. Journal of Plant Research, 129(4):727-736.

Paape, Timothy; Hatakeyama, Masaomi; Shimizu-Inatsugi, Rie; Cereghetti, Teo; Onda, Yoshihiko; Kenta, Tanaka; Sese, Jun; Shimizu, Kentaro K (2016). Conserved but attenuated parental gene expression in allopolyploids: constitutive zinc hyperaccumulation in the allotetraploidArabidopsis kamchatica. Molecular Biology and Evolution:1-44.

Briskine, Roman V; Paape, Timothy; Shimizu-Inatsugi, Rie; Nishiyama, Tomoaki; Akama, Satoru; Sese, Jun; Shimizu, Kentaro K (2016). Genome assembly and annotation ofArabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology. Molecular Ecology Notes:Epub ahead of print.

Menardo, Fabrizio; Praz, Coraline R; Wyder, Stefan; Ben-David, Roi; Bourras, Salim; Matsumae, Hiromi; McNally, Kaitlin E; Parlange, Francis; Riba, Andrea; Roffler, Stefan; Schaefer, Luisa K; Shimizu, Kentaro K; Valenti, Luca; Zbinden, Helen; Wicker, Thomas; Keller, Beat (2016). Hybridization of powdery mildew strains gives rise to pathogens on novel agricultural crop species. Nature Genetics, 48(2):201-205.

Shimizu-Inatsugi, Rie; Terada, Aika; Hirose, Kyosuke; Kudoh, Hiroshi; Sese, Jun; Shimizu, Kentaro K (2016). Plant adaptive radiation mediated by polyploid plasticity in transcriptomes. Molecular Ecology:1-35.

Novikova, Polina Yu; Hohmann, Nora; Nizhynska, Viktoria; Tsuchimatsu, Takashi; Ali, Jamshaid; Muir, Graham; Guggisberg, Alessia; Paape, Tim; Schmid, Karl; Fedorenko, Olga M; Holm, Svante; Säll, Torbjörn; Schlötterer, Christian; Marhold, Karol; Widmer, Alex; Sese, Jun; Shimizu, Kentaro K; Weigel, Detlef; Krämer, Ute; Koch, Marcus A; Nordborg, Magnus (2016). Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism. Nature Genetics, 48(9):1077-1082.

Gan, Xiangchao; Hay, Angela; et al; Briskine, Roman V; Shimizu, Kentaro K; Shimizu-Inatsugi, Rie (2016). The Cardamine hirsuta genome offers insight into the evolution of morphological diversity. Nature Plants, 2(11):16167.

Shimizu, Kentaro K; Tsuchimatsu, Takashi (2015). Evolution of selfing: recurrent patterns in molecular adaptation. Annual Review of Ecology, Evolution and Systematics, 46:593-622.

Kawabata, Hiroto; Shimizu, Kentaro K. Visiting a laboratory: Prof. Kentaro Shimizu at the Institute of Evolutionary Biology and Environmental Studies, University of Zurich, series 1 to 7. In: National Geographic Web Japan, 4 March 2015, p.online.

Tedder, Andrew; Helling, Matthias; Pannell, John R; Shimizu-Inatsugi, Rie; Kawagoe, Tetsuhiro; van Campen, Julia; Sese, Jun; Shimizu, Kentaro K (2015). Female sterility associated with increased clonal propagation suggests a unique combination of androdioecy and asexual reproduction in populations of Cardamine amara (Brassicaceae). Annals of Botany, 115(5):763-776.

Shimizu, Kentaro K (2015). Life with science course (Rikei seikatsu) 2 Work and life of seniors after science course 47 Professor at the University of Zurich, Switzerland. In: The Ceramic Society of Japan. Life with science course (Rikei Seikatsu). Tokyo: The Ceramic Society of Japan, 128-129.

Takeuchi, Yayoi; Chaffron, Samuel; Salcher, Michaela M; Shimizu-Inatsugi, Rie; Kobayashi, Masaki J; Diway, Bibian; von Mering, Christian; Pernthaler, Jakob; Shimizu, Kentaro K (2015). Bacterial diversity and composition in the fluid of pitcher plants of the genus Nepenthes. Systematic and Applied Microbiology, 38(5):330-339.

Stockenhuber, Reinhold; Zoller, Stefan; Shimizu-Inatsugi, Rie; Gugerli, Felix; Shimizu, Kentaro K; Widmer, Alex; Fischer, Martin C (2015). Efficient detection of novel nuclear markers for brassicaceae by transcriptome sequencing. PLoS ONE, 10(6):e0128181.

Tedder, Andrew; Carleial, Samuel; Gołębiewska, Martyna; Kappel, Christian; Shimizu, Kentaro K; Stift, Marc (2015). Evolution of the Selfing Syndrome in Arabis alpina (Brassicaceae). PLoS ONE, 10(6):e0126618.

Kubo, Ken-ichi; Paape, Timothy; Hatakeyama, Masaomi; Entani, Tetsuyuki; Takara, Akie; Kajihara, Kie; Tsukahara, Mai; Shimizu-Inatsugi, Rie; Shimizu, Kentaro K; Takayama, Seiji (2015). Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia. Nature Plants, 1:14005.

Shimizu, Kentaro K; Akiyama, Reiko; Hatakeyama, Masaomi (2015). Science channel: addressing evolutionary questions using whole genome sequencing. : Science Channel, Japan Science and Technology Agency.

Shimizu-Inatsugi, Rie; Shimizu, Kentaro K (2015). Speciation after the 20th century: adaptation to new environments by genome duplications. In: Hasebe, Mitsuyasu. Solving evolutionary mysteries using genomics. Tokyo: Shujunsha, 48-57.

Matsuda, Tomoki; Matsushima, Mai; Nabemoto, Moe; Osaka, Masaaki; Sakazono, Satomi; Masuko-Suzuki, Hiromi; Sone, Mikako; Takahashi, Hirokazu; Nakazono, Mikio; Iwano, Megumi; Takayama, Seiji; Shimizu, Kentaro K; Okumura, Katsuzumi; Suzuki, Go; Watanabe, Masao; Suwabe, Keita (2015). Transcriptional characteristics and differences in Arabidopsis stigmatic papilla cells pre- and post-pollination. Plant and Cell Physiology, 56(4):663-673.

Shimizu, Kentaro K (2014). A Japanese PI in Switzerland. HFSP Matters, 4:8-9.

Shimizu, Kentaro K (2014). Network merging analysis of duplicate genome function in recently hybridized species. In: Awardees of Human Frontier Science Program. Tokyo: s.n., 26-27.

Szövényi, Peter; Devos, Nicolas; Weston, David J; Yang, Xiaohan; Hock, Zsofia; Shaw, A Jonathan; Shimizu, Kentaro K; McDaniel, Stuart; Wagner, Andreas (2014). Efficient purging of deleterious mutations in plants with haploid selfing. Genome Biology and Evolution, 6(5):1238-1252.

Akama, Satoru; Shimizu-Inatsugi, Rie; Shimizu, Kentaro K; Sese, Jun (2014). Genome-wide quantification of homeolog expression ratio revealed nonstochastic gene regulation in synthetic allopolyploid Arabidopsis. Nucleic Acids Research, 42(6):e46.

Zozomová-Lihova, Judita; Krak, Karol; Mandakova, Terezie; Shimizu, Kentaro K; Spaniel, Staniskav; Vit, Petr; Lysak, Martin A (2014). Multiple hybridization events in Cardamine (Brassicaceae) during the last 150 years: revisiting a textbook example of neoallopolyploidy. Annals of Botany, 113(5):817-830.

Miyazaki, Yuko; Maruyama, Yosuke; Chiba, Yukako; Kobayashi, Masaki J; Joseph, Benesh; Shimizu, Kentaro K; Mochida, Keiichi; Hiura, Tsutom; Kon, Hirokazu; Satake, Akiko (2014). Nitrogen as a key regulator of flowering in Fagus crenata: understanding the physiological mechanism of masting by gene expression analysis. Ecology Letters, 17(10):1299-1309.

Shimizu-Inatsugi, Rie; Shimizu, Kentaro K (2014). Speciation after the 20th century: adaptation to new environments by genome duplications. Cell Technology, 33(8):878-883.

Ogura, Atsushi; Yoshida, Masa-aki; Moritaki, Takeya; Sese, Jun; Shimizu, Kentaro K; Sousounis, Konstantinos; Tsonis, Panagiotis A (2013). Loss of the six3/6 controlling pathways might have resulted in pinhole-eye evolution in Nautilus. Scientific Reports, 3:1432.

Shimizu, Kentaro K (2013). Pollen, Pollen tube, Selfing, Pistil, Ovule, Endosperm, Embryo sac, Sporangium, Stamen. In: Iwasa, Yoh; Kuratani, Shigeru; Saitou, Naruya; Tsukaya, Hirokazu. Iwanami Biology Dictionary, 5th Edition. Tokyo: Iwanami, nn-nn.

Osaka, Masaaki; Matsuda, Tomoki; Sakazono, Satomi; Masuko-Suzuki, Hiromi; Maeda, Shunsuke; Sewaki, Misato; Sone, Mikako; Takahashi, Hirokazu; Nakazono, Mikio; Iwano, Megumi; Takayama, Seiji; Shimizu, Kentaro K; Yano, Kentaro; Lim, Yong Pyo; Suzuki, Go; Suwabe, Keita; Watanabe, Masao (2013). Cell type-specific transcriptome of Brassicaceae stigmatic papilla cells from a combination of laser microdissection and RNA sequencing. Plant and Cell Physiology, 54(11):1894-1906.

Kobayashi, Masaki J; Shimizu, Kentaro K (2013). Challenges in studies on flowering time: interfaces between phenological research and the molecular network of flowering genes. Ecological Research, 28(2):161-172.

Tsuchimatsu, Takashi; Shimizu, Kentaro K (2013). Effects of pollen availability and the mutation bias on the fixation of mutations disabling the male specificity of self-incompatibility. Journal of Evolutionary Biology, 26(10):2221-2232.

Tsuchimatsu, Takashi; Shimizu, Kentaro K (2013). Evolutionary Ecology of self-incompatibility: studying natural selection on plant self-recognition systems. Iden : the Review of Biological Sciences, 67:244-251.

Kobayashi, Masaki J; Takeuchi, Yayoi; Kenta, Tanaka; Kume, Tomonori; Diway, Bibian; Shimizu, Kentaro K (2013). Mass flowering of the tropical tree Shorea beccariana was preceded by expression changes in flowering and drought-responsive genes. Molecular Ecology, 22(18):4767-4782.

Fischer, Martin C; Rellstab, Christian; Tedder, Andrew; Zoller, Stefan; Gugerli, Felix; Shimizu, Kentaro K; Holderegger, Rolf; Widmer, Alex (2013). Population genomic footprints of selection and associations with climate in natural populations of Arabidopsis halleri from the Alps. Molecular Ecology, 22(22):5594-5607.

Szovenyi, Peter; Ricca, Mariana; Hock, Zsofia; Shaw, Jonathan A; Shimizu, Kentaro K; Wagner, Andreas (2013). Selection is no more efficient in haploid than in diploid life stages of an angiosperm and a moss. Molecular Biology and Evolution, 30(8):1929-1939.

Mandákova, Terezie; Kovarík, Ales; Zozomová-Lihova, Judita; Shimizu-Inatsugi, Rie; Shimizu, Kentaro K; Mummenhoff, Klaus; Marhold, Karol; Lysak, Martin A (2013). The more the merrier: Recent hybridization and polyploidy in Cardamine. Plant Cell, 25(9):3280-3295.

Wicker, Thomas; Oberhaensli, Simone; Parlange, Francis; Buchmann, Jan P; Shatalina, Margarita; Roffler, Stefan; Ben-David, Roi; Doležel, Jaroslav; Šimkova, Hana; Schulze-Lefert, Paul; Spanu, Pietro D; Bruggmann, Rémy; Amselem, Joelle; Quesneville, Hadi; van Themaat, Emiel Ver Loren; Paape, Timothy; Shimizu, Kentaro K; Keller, Beat (2013). The wheat powdery mildew genome shows the unique evolution of an obligate biotroph. Nature Genetics, 45(9):1092-1096.

Shimizu, Kentaro K (2012). Chapter 12 Overview: the evolution of genes responsible for adaptation. In: Morinaga, Shinichi; Kudoh, Hiroshi. Current Ecology Series 7: Ecological genomics: understanding the adaptation from gene function. Tokyo: Kyoritsu, Tokyo, Japan, 189-196.

Shimizu-Inatsugi, Rie; Shimizu, Kentaro K (2012). Chapter 16: Genome duplication - speciation and ecogenomics of polyploid species. In: Morinaga, Shinichi; Kudoh, Hiroshi. Current Ecology Series 7: Ecological genomics: understanding the adaptation from gene function. Tokyo: Kyoritsu, Tokyo, Japan, 246-262.

Yamada, Megumi; Shimizu-Inatsugi, Rie; Shimizu, Kentaro K; Sese, Jun (2012). Quantified expression levels of genes in allopolyploid species. IPSJ SIG Technical Reports, 28:1-2.

Tsuchimatsu, Takashi; Kaiser, Pascal; Yew, Chow-Lih; Bachelier, Julien B; Shimizu, Kentaro K (2012). Recent loss of self-incompatibility by degradation of the male component in allotetraploid Arabidopsis kamchatica. PLoS Genetics, 8(7):e1002838.

de la Chaux, Nicole; Tsuchimatsu, Takashi; Shimizu, Kentaro K; Wagner, Andreas (2012). The predominantly selfing plant Arabidopsis thaliana experienced a recent reduction in transposable element abundance compared to its outcrossing relative Arabidopsis lyrata. Mobile DNA, 3:2.

Yoshida, Masa-aki; Ishikura, Yukiko; Moritaki, Takeya; Shoguchi, Eiichi; Shimizu, Kentaro K; Sese, Jun; Ogura, Atsushi (2011). Genome structure analysis of molluscs revealed whole genome duplication and lineage specific repeat variation. Gene, 483(1-2):63-71.

Shimizu, Kentaro K; Kudoh, Hiroshi; Kobayashi, Masaki J (2011). Plant sexual reproduction during climate change: gene function in natura studied by ecological and evolutionary systems biology. Annals of Botany, 108(4):777-787.

Kawagoe, Tetsuhiro; Shimizu, Kentaro K; Kakutani, Tetsuji; Kudoh, Hiroshi (2011). Coexistence of trichome variation in a natural plant population: A combined study using ecological and candidate gene approaches. PLoS ONE, 6(7):e22184.

Shimizu-Inatsugi, Rie; Shimizu, Kentaro K (2011). Plant flowering and sexual reproduction during climate change: quantitative prediction by eco-systems biology. Cell Technology, 30(2):167-173.

Saito, Hideyuki; Sese, Jun; Shimizu-Inatsugi, Rie; Kamimura, Shoko; Yamada, Tadayasu; Shimizu, Kentaro K (2011). Development of DNA microarray for Fagus crenata. Forest Tree Breeding of Hokkaido, 54(2):11-14.

Shimizu, Kentaro K (2011). Graduate schools and research in Switzerland. Newsletter of Japanese Society of Plant Physiologists (Shokubutsu Seiri Gakkai Tsushin), 111:17-20.

Tsuchimatsu, Takashi; Shimizu, Kentaro K (2011). How the model species Arabidopsis thaliana became self-fertilizing: evolution of breeding systems revealed by DNA sequence information. Kagaku To Seibutsu, 49(6):364-366.

Takeuchi, Yayoi; Salcher, Michaela M; Ushio, Masayuki; Shimizu-Inatsugi, Rie; Kobayashi, Masaki J; Diway, Bibian; von Mering, Christian; Pernthaler, Jakob; Shimizu, Kentaro K (2011). In situ enzyme activity in the dissolved and particulate fraction of the fluid from four pitcher plant species of the genus nepenthes. PLoS ONE, 6(9):e25144.

Takeuchi, Yayoi; Shimizu, Kentaro K (2011). Potential application of pollen genotyping for evolutionary genetic and genomic studies: linkage/recombination analysis and haplotype sequencing, in Ecological Research Monographs ‘Single-Pollen Genotyping’. In: Isagi, Y; Suyama, Y. Single-Pollen Genotyping. Tokyo [etc.]: Springer, 111-123.

Takeuchi, Yayoi; Shimizu, Kentaro K (2011). The study of microbial diversity and function using metagenomics. Shuseibutsugaku kenkyū, 34:123-138.

Zust, Tobias; Joseph, Bindu; Shimizu, Kentaro K; Kliebenstein, Daniel J; Turnbull, Lindsay A (2011). Using knockout mutants to reveal the growth costs of defensive traits. Proceedings of the Royal Society B: Biological Sciences, 278(1718):2598-2603.

Konaka, Yoshiko; Fukuzaki, Mutsumi; Yoshida, Masaaki; Shimizu, Kentaro K; Ogura, Atsushi; Sese, Jun (2010). Gene duplication detection with frequent pattern analysis. IPSJ SIG Technical Reports, 23:1-8.

Tsuchimatsu, Takashi; Shimizu, Kentaro K (2010). From outcrossing to selfing: the evolutionary transition of reproductive systems in Arabidopsis. Iden:7-12.

Tsuchimatsu, Takashi; Shimizu, Kentaro K (2010). The genetic basis for the evolution of self-compatibility in Arabidopsis. BSJ Review:90-95.

Aikawa, Shinichiro; Kobayashi, Masaki J; Satake, Akiko; Shimizu, Kentaro K; Kudoh, Hiroshi (2010). Robust control of the seasonal expression of the Arabidopsis FLC gene in a fluctuating environment. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 107(25):11632-11637.

Tsuchimatsu, Takashi; Suwabe, Keita; Shimizu-Inatsugi, Rie; Isokawa, Sachiyo; Pavlidis, Pavlos; Städler, Thomas; Suzuki, Go; Takayama, Seiji; Watanabe, Masao; Shimizu, Kentaro K (2010). Evolution of self-compatibility in Arabidopsis by a mutation in the male specificity gene. Nature, 464(7293):1342-1346.

Seeholzer, Sabine; Tsuchimatsu, Takashi; Jordan, Tina; Bieri, Stéphane; Pajonk, Simone; Yang, Wenxiang; Jahoor, Ahmed; Shimizu, Kentaro K; Keller, Beat; Schulze-Lefert, Paul (2010). Diversity at the Mla powdery mildew resistance locus from cultivated barley reveals sites of positive selection. Molecular Plant-Microbe Interactions, 23(4):497-509.

Shimizu, Kentaro K; Takeuchi, Yayoi (2009). Ecological genomics – a novel approach toward community ecology. In: Ohgushi, T; Kondo, M; Yoshida, T. New challenges in community ecology. Kyoto, JP: Kyoto University Press, 223-241.

Shimizu, Kentaro K (2009). Pollen tubes and hairs. In: Ishii, R. Plant Encyclopedia. Tokyo, Japan: s.n. , 207-208.

Shimizu-Inatsugi, Rie; Lihova, Judita; Iwanaga, Hiroko; Kudoh, Hiroshi; Savolainen, Outi; Watanabe, Kuniaki; Yakubov, Valentin V; Shimizu, Kentaro K (2009). The allopolyploid Arabidopsis kamchatica originated from multiple individuals of Arabidopsis lyrata and Arabidopsis halleri. Molecular Ecology, 18(19):4024-4048.

Shimizu, Kentaro K; Ito, Toshiro; Ishiguro, Sumie; Okada, Kiyotaka (2008). MAA3 (MAGATAMA3) helicase gene is required for female gametophyte development and pollen tube guidance in Arabidopsis thaliana. Plant & Cell Physiology, 49(10):1478-1483.

Fujimoto, Ryo; Kinoshita, Yuki; Kawabe, Akira; Kinoshita, Tetsu; Takashima, Kazuya; Nordborg, Magnus; Nasrallah, Mikhail E; Shimizu, Kentaro K; Kudoh, Hiroshi; Kakutani, Tetsuji (2008). Evolution and control of imprinted FWA genes in the genus Arabidopsis. PLoS Genetics, 4(4)::e1000048..

Mäder, Claudia; Shimizu, Kentaro K. Exoten unter den Uni-Professoren. In: Der Landbote, 25 March 2008, p.25.

Shimizu, Kentaro K; Shimizu-Inatsugi, Rie; Tsuchimatsu, Takashi; Purugganan, Michael D (2008). Independent origins of self-compatibility in Arabidopsis thaliana. Molecular Ecology, 17(2):704-714.

Shimizu, Kentaro K (2008). Letter from laboratories in foreign countries 9. International research environment grown in Switzerland: Institute of Plant Biology, University of Zurich. Society of Evolutionary Studies, Japan News, 9:10-16.

Shimizu, Kentaro K (2007). Basic principles of evolutionary genomics - 10 introductions for molecular biologists. In: Shimizu, Kentaro K; Hasebe, Mitsuyasu. Plant Evolution. Tokyo: Shujunsha, 48-57.

Shimizu, Kentaro K (2007). Ecologist@world, No. 8. From postdoc in the USA to the lab start up in Switzerland. Japanese Journal of Ecology, 57(3):432-437.

Plant Evolution. Edited by: Shimizu, Kentaro K; Mitsuyasu, Hasebe (2007). Tokyo: Shujunsha.

Shimizu-Inatsugi, Rie; Shimizu, Kentaro K (2007). Speciation and evolution of reproductive systems. In: Shimizu, Kentaro K; Hasebe, Mitsuyasu. Plant Evolution. Tokyo: Shujunsha, 83-91.

Shimizu, Kentaro K (2007). Wild Arabidopsis and its relatives. In: Shimizu, Kentaro K; Hasebe, Mitsuyasu. Plant Evolution. Tokyo: Shujunsha, 16-17.

Lihova, Judita; Shimizu, Kentaro K; Marhold, Karol (2006). Allopolyploid origin of Cardamine asarifolia (Brassicaceae): incongruence between plastid and nuclear ribosomal DNA sequences solved by a single-copy nuclear gene. Molecular Phylogenetics and Evolution, 39(3):759-786.

Shimizu, Kentaro K (2006). Evolutionary genomics (evolutionary and ecological functional genomics): The power of Arabidopsis thaliana to study adaptive evolution. Japanese Journal of Ecology, 56:28-46.

Shimizu, Kentaro K; Purugganan, Michael D (2006). Arabidopsis as a model organism in evolutionary genetics. In: Fox, Charles W; Wolf, Jason B. Evolutionary Genetics: Concepts And Case Studies. New York: Oxford Univ Press, 453-455.

Shimizu, Kentaro K (2006). Letter from laboratories in foreign countries 5. Department of Genetics, North Carolina State University. Nihon Shinka Gakkai nyusu, 5:4-5.

Shimizu, Kentaro K (2005). Evolutionary genomics confirmed Darwin's selfing model: An adaptation revealed by DNA analysis. Protein, Nucleic Acid and Enzyme, 50(8):966-977.

Shimizu, Kentaro K; Purugganan, Michael D (2005). Evolutionary and ecological genomics of Arabidopsis. Plant Physiology, 138(2):578-584.

Shimizu, Kentaro K; Okada, Kiyotaka; Kudoh, Hiroshi; Purugganan, Michael D (2005). Arabidopsis and related species as models to study speciation. Genes & Genetic Systems, 80(6):442.

Shimizu, Kentaro K; Fuji, Shinji; Marhold, Karol; Watanabe, Kuniaki; Kudoh, Hiroshi (2005). Arabidopsis kamchatica (Fisch. ex DC.) К. Shimizu & Kudoh and A. kamchatica subsp. kawasakiana (Makino) K. Shimizu & Kudoh, New Combinations. Acta Phytotaxonomica et Geobotanica, 56(2):163-172.

Shimizu, Kentaro K; Purugganan, Michael D (2005). Evolutionary genomics supported Darwin's hypothesis about the evolution of selfing. Genes & Genetic Systems, 80(6):431.

Kanaoka, Masahiro; Shimizu, Kentaro K; Okada, Kiyotaka (2004). KOMPEITO is essential for the sculpture of pollen wall and callose accumulation in Arabidopsis thaliana. Nippon Shokubutsu Seiri Gakkai Nenkai ayobi Shinpojiumu Koen Yshishu 45, University of Zurich.

Kanaoka, Masahiro; Shimizu, Kentaro K; Okada, Kiyotaka (2003). Genetic analysis of the male-female interactions between male and female tissues in Arabidopsis. Plant & Cell Physiology, 44:S21.

Shimizu, Kentaro K (2003). Rules in morphology and evolution revealed by the study of flowers. In: Sekimura, Toshio; Noji, Sumihare; Morita, Rihito. Diversity in Pattern and Form of Biological Systems - From DNA to Ecological System -. Tokyo: Shokabo, 137-151.

Shimizu, Kentaro K (2002). Ecology meets molecular genetics in Arabidopsis. Population Ecology, 44(3):221-233.

Shimizu, Kentaro K (2002). A dream beyond scientific fields: in the special issue "how is the life as a scientist?". Science Journal Kagaku, 72(4):470-471.

Shimizu, Kentaro K (2002). Males wander to look for females - from the model species Arabidopsis thaliana to its related species in the natural field -. Biohistory, 32:14-15.

Kenta, Tanaka; Shimizu, Kentaro K; Nakagawa, Michiko; Okada, Kiyotaka; Hamid, Abang A; Nakashizuka, Tohru (2002). Multiple factors contribute to outcrossing in a tropical emergent Dipterocarpus tempehes, including a new pollen-tube guidance mechanism for self-incompatibility. American Journal of Botany, 89(1):60-66.

Shimizu, Kentaro K (2002). Studying abroad: advice by those who experienced it. Protein, Nucleic Acid and Enzyme, 47(142):1969-1971.

Kanaoka, Masahiro; Shimizu, Kentaro K; Okada, Kiyotaka (2001). Genetic dissection of signal exchange between male and female reproductive organs in Arabidopsis. Plant & Cell Physiology, 42:S42.

Shimizu, Kentaro K (2001). Toward the era of cloning quantitative trait locus: RAS changes the size of the tomato fruit. Protein, Nucleic Acid and Enzyme, 46(2):166-167.

Shimizu, Kentaro K; Okada, Kiyotaka (2000). Attractive and repulsive interactions between female and male gametophytes in Arabidopsis pollen tube guidance. Development, 127(20):4511-4518.

Shimizu, Kentaro K (2000). Darwin's "abominable" mystery: the oldest flower was identified by elegant and brute-force molecular phylogenetic studies. Protein, Nucleic Acid and Enzyme, 45(4):618-620.

Shimizu, Kentaro K (2000). Gametophytes and Pollen Tube Guidance; From Genetics to Development and Evolution. In: Okada, Kiyotaka; Machida, Yasunori; Matsuoka, Makoto. New edition: molecular mechanisms detemining plant morphology. Tokyo: Shokabo, 173-184.

Shimizu, Kentaro K (1999). Ion channels of plants without neurons: Glutamate receptor and Shaker-like K+ channel. Protein, Nucleic Acid and Enzyme, 44(3):274-275.

Shimizu, Kentaro K (1999). SH2 homology region in the "green revolution" gene: from the model species Arabidopsis to crop species wheat. Protein, Nucleic Acid and Enzyme, 44(14):2114-2115.

Oyama, Tokitaka; Shinichiro, Sawa; Shimizu, Kentaro K (1998). Symposium for the 13th International Prize for Biology: frontiers of plant biology. Protein, Nucleic Acid and Enzyme, 43(6):816-818.

This list was generated on Tue Sep 26 06:44:50 2017 CEST.