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Publications for Ahrens, C H

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Number of items: 20.

2016

Urfer, Matthias; Bogdanovic, Jasmina; Lo Monte, Fabio; Moehle, Kerstin; Zerbe, Katja; Omasits, Ulrich; Ahrens, Christian H; Pessi, Gabriella; Eberl, Leo; Robinson, John A (2016). A peptidomimetic antibiotic targets outer membrane proteins and disrupts selectively the outer membrane in Escherichia coli. Journal of Biological Chemistry, 291:1921-1932.

2015

De Vrieze, Mout; Pandey, Piyush; Bucheli, Thomas D; Varadarajan, Adithi R; Ahrens, Christian H; Weisskopf, Laure; Bailly, Aurélien (2015). Volatile organic compounds from native potato-associated pseudomonas as potential anti-oomycete agents. Frontiers in Microbiology, 6:1295.

Lardi, Martina; Aguilar, Claudio; Pedrioli, Alessandro; Omasits, Ulrich; Suppiger, Angela; Cárcamo-Oyarce, Gerardo; Schmid, Nadine; Ahrens, Christian H; Eberl, Leo; Pessi, Gabriella (2015). σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111. Applied and Environmental Microbiology, 81(12):4077-4089.

2014

Qeli, Ermir; Omasits, Ulrich; Goetze, Sandra; Stekhoven, Daniel J; Frey, Juerg E; Basler, Konrad; Wollscheid, Bernd; Brunner, Erich; Ahrens, Christian H (2014). Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data. Journal of Proteomics, 108:269-283.

Koch, M; Delmotte, N; Ahrens, C H; Omasits, U; Schneider, K; Danza, F; Padhi, B; Murset, V; Braissant, O; Vorholt, J A; Hennecke, H; Pessi, G (2014). A Link between Arabinose Utilization and Oxalotrophy in Bradyrhizobium japonicum. Applied and Environmental Microbiology, 80(7):2094-2101.

2013

Omasits, Ulrich; Quebatte, Maxime; Stekhoven, Daniel J; Fortes, Claudia; Roschitzki, Bernd; Robinson, Mark D; Dehio, Christoph; Ahrens, Christian H (2013). Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome. Genome Research, 23(11):1916-1927.

Carlier, Aurelien L; Omasits, Ulrich; Ahrens, Christian H; Eberl, Leo (2013). Proteomics analysis of Psychotria leaf nodule symbiosis: Improved genome annotation and metabolic predictions. Molecular Plant-Microbe Interactions, 26(11):1325-1333.

Pessi, Gabriella; Braunwalder, Rubina; Grunau, Alexander; Omasits, Ulrich; Ahrens, Christian H; Eberl, Leo (2013). Response of Burkholderia cenocepacia H111 to Micro-Oxia. PLoS ONE, 8(9):e72939.

Handke, Björn; Poernbacher, Ingrid; Goetze, Sandra; Ahrens, Christian H; Omasits, Ulrich; Marty, Florian; Simigdala, Nikiana; Meyer, Imke; Wollscheid, Bernd; Brunner, Erich; Hafen, Ernst; Lehner, Christian F (2013). The hemolymph proteome of fed and starved Drosophila larvae. PLoS ONE, 8(6):e67208.

2012

Deng, Y; Schmid, N; Wang, C; Wang, J; Pessi, G; Wu, D; Lee, J; Aguilar, C; Ahrens, C H; Chang, C; Song, H; Eberl, L; Zhang, L H (2012). Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover. Proceedings of the National Academy of Sciences of the United States of America, 109(38):15479-15484.

Schmid, Nadine; Pessi, Gabriella; Deng, Yinyue; Aguilar, Claudio; Carlier, Aurelien L; Grunau, Alexander; Omasits, Ulrich; Zhang, Lian-Hui; Ahrens, Christian H; Eberl, Leo (2012). The AHL- and BDSF-dependent quorum sensing systems control specific and overlapping sets of genes in Burkholderia cenocepacia H111. PLoS ONE, 7(11):e49966.

Jones, A M E; Aebersold, R; Ahrens, C H; Apweiler, R; Baerenfaller, K; Baker, M; Bendixen, E; Briggs, S; Brownridge, P; Brunner, E; Daube, M; Deutsch, E W; Grossniklaus, U; Heazlewood, J L; Hengartner, M O; Hermjakob, H; Jovanovic, M; Lawless, C; Lochnit, G; Martens, L; Ravnsborg, C; Schrimpf, S P; Shim, Y H; Subasic, D; Tholey, A; van Wijk, K; von Mering, C; Weiss, M; Zheng, X (2012). The HUPO initiative on Model Organism Proteomes, iMOP. Proteomics, 12(3):340-345.

2010

Ahrens, C H; Brunner, E; Qeli, E; Basler, K; Aebersold, R (2010). Generating and navigating proteome maps using mass spectrometry. Nature Reviews. Molecular Cell Biology, 11(11):789-801.

Ahrens, C H; Brunner, E; Basler, K (2010). Quantitative proteomics: a central technology for systems biology. Journal of Proteomics, 73(4):820-827.

2009

Schrimpf, S P; Weiss, M; Reiter, L; Ahrens, C H; Jovanovic, M; Malmström, J; Brunner, E; Mohanty, S; Lercher, M J; Hunziker, P E; Aebersold, R; von Mering, C; Hengartner, M O (2009). Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes. PLoS Biology, 7(3):e48.

Grobei, M A; Qeli, E; Brunner, E; Rehrauer, H; Zhang, R; Roschitzki, B; Basler, K; Ahrens, C H; Grossniklaus, U (2009). Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function. Genome Research, 19(10):1786-1800.

Goetze, S; Qeli, E; Mosimann, C; Staes, A; Gerrits, B; Roschitzki, B; Mohanty, S; Niederer, E M; Laczko, E; Timmerman, E; Lange, V; Hafen, E; Aebersold, R; Vandekerckhove, J; Basler, K; Ahrens, C H; Gevaert, K; Brunner, E (2009). Identification and functional characterization of N-terminally acetylated proteins in Drosophila melanogaster. PLoS Biology, 7(11):e1000236.

2007

Pessi, G; Ahrens, C H; Rehrauer, H; Lindemann, A; Hauser, F; Fischer, H M; Hennecke, H (2007). Genome-wide transcript analysis of Bradyrhizobium japonicum bacteroids in soybean root nodules. Molecular Plant-Microbe Interactions, 20(11):1353-1363.

Potthast, F; Gerrits, B; Häkkinen, J; Rutishauser, D; Ahrens, C H; Roschitzki, B; Baerenfaller, K; Munton, R P; Walther, P; Gehrig, P; Seif, P; Seeberger, P H; Schlapbach, R (2007). The Mass Distance Fingerprint: a statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry. Journal of Chromatography B, 854(1-2):173-182.

Brunner, E; Ahrens, C H; Mohanty, S; Baetschmann, H; Loevenich, S; Potthast, F; Deutsch, E W; Panse, C; de Lichtenberg, U; Rinner, O; Lee, H; Pedrioli, P G A; Malmstrom, J; Koehler, K; Schrimpf, S; Krijgsveld, J; Kregenow, F; Heck, A J R; Hafen, E; Schlapbach, R; Aebersold, R (2007). A high-quality catalog of the Drosophila melanogaster proteome. Nature Biotechnology, 25(5):576-583.

This list was generated on Sat Dec 16 08:34:39 2017 CET.