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Items where Subject is "07 Faculty of Science > Department of Plant and Microbial Biology" - Zurich Open Repository and Archive

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Praz, Coraline R; Bourras, Salim; Zeng, Fansong; Sánchez-Martín, Javier; Menardo, Fabrizio; Xue, Minfeng; Yang, Lijun; Roffler, Stefan; Böni, Rainer; Herren, Gerard; McNally, Kaitlin E; Ben-David, Roi; Parlange, Francis; Oberhaensli, Simone; Flückiger, Simon; Schäfer, Luisa K; Wicker, Thomas; Yu, Dazhao; Keller, Beat (2017). AvrPm2 encodes an RNase-like avirulence effector which is conserved in the two different specialized forms of wheat and rye powdery mildew fungus. New Phytologist, 213(3):1301-1314.

Sucher, Justine; Boni, Rainer; Yang, Ping; Rogowsky, Peter; Büchner, Heike; Kastner, Christine; Kumlehn, Jochen; Krattinger, Simon G; Keller, Beat (2017). The durable wheat disease resistance gene Lr34 confers common rust and northern corn leaf blight resistance in maize. Plant Biotechnology Journal, 15(4):489-496.

Jacquat, Christiane; Della Casa, Philippe (2017). Airolo-Madrano (TI): Palaeoenvironment and subsistence strategies of a hilltop settlement in the southern Swiss Alps during the Bronze and Iron Ages. Quaternary International: The Journal of the International Union for Quaternary Research:Epub ahead of print.

Sucher, Justine. Study of the wheat resistance gene Lr34 after its transfer into heterologous crop species. 2017, University of Zurich, Faculty of Science.

Singla, Jyoti; Lüthi, Linda; Wicker, Thomas; Bansal, Urmil; Krattinger, Simon G; Keller, Beat (2017). Characterization of Lr75: a partial, broad-spectrum leaf rust resistance gene in wheat. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 130(1):1-12.

Hu, Chengzhi; Munglani, Gautam; Vogler, Hannes; Ndinyanka Fabrice, Tohnyui; Shamsudhin, Naveen; Wittel, Falk K; Ringli, Christoph; Grossniklaus, Ueli; Herrmann, Hans J; Nelson, Bradley J (2017). Characterization of size-dependent mechanical properties of tip-growing cells using a lab-on-chip device. Lab on a chip, 17(1):82-90.

Qureshi, Naeela; Bariana, Harbans; Forrest, Kerrie; Hayden, Matthew; Keller, Beat; Wicker, Thomas; Faris, Justin; Salina, Elena; Bansal, Urmil (2017). Fine mapping of the chromosome 5B region carrying closely linked rust resistance genes Yr47 and Lr52 in wheat. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 130(3):495-504.

Meier, Margrith; Suppiger, Angela; Eberl, Leo; Seeger, Stefan (2017). Functional silver-silicone-nanofilament-composite material for water disinfection. Small, 13(4):1601072.

Bouchaud, Charlene; Jacquat, Christiane; Martinoli, Danièle (2017). Landscape use and fruit cultivation in Petra (Jordan) from Early Nabataean to Byzantine times (2nd century bc–5th century ad). Vegetation History and Archaeobotany, 26(2):223-244.

Rellstab, C; Fischer, M C; Zoller, S; Graf, R; Tedder, Andrew; Shimizu, Kentaro K; Widmer, A; Holderegger, R; Gugerli, F (2017). Local adaptation (mostly) remains local: reassessing environmental associations of climate-related candidate SNPs in Arabidopsis halleri. Heredity, 118(2):193-201.

Baroux, Célia; Pecinka, Ales; Fuchs, Jörg; Kreth, Gregor; Schubert, Ingo; Grossniklaus, Ueli (2017). Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma, 126(1):115-124.

Singh, Simrat Pal; Keller, Beat; Gruissem, Wilhelm; Bhullar, Navreet K (2017). Rice NICOTIANAMINE SYNTHASE 2 expression improves dietary iron and zinc levels in wheat. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 130(2):283-292.

Menardo, Fabrizio. Evolutionary Genomics of Grass Powdery Mildew (Blumeria graminis). 2016, University of Zurich, Faculty of Science.

Suppiger, Angela. Fatty Acid-Based Signalling in the Genus Burkholderia: Distribution, Mechanism, Cross-Linkage. 2016, University of Zurich, Faculty of Science.

Urfer, Matthias; Bogdanovic, Jasmina; Lo Monte, Fabio; Moehle, Kerstin; Zerbe, Katja; Omasits, Ulrich; Ahrens, Christian H; Pessi, Gabriella; Eberl, Leo; Robinson, John A (2016). A peptidomimetic antibiotic targets outer membrane proteins and disrupts selectively the outer membrane in Escherichia coli. Journal of Biological Chemistry, 291:1921-1932.

Granato, Elisa; Harrison, Freya; Kümmerli, Rolf (2016). Do bacterial “virulence factors” always increase virulence? A meta-analysis of pyoverdine production in Pseudomonas aeruginosa as a test case. Frontiers in Microbiology, 7:1952.

Sasse, Joëlle; Schlegel, Markus; Borghi, Lorenzo; Ullrich, Friederike; Lee, Miyoung; Liu, Guo-Wei; Giner, José-Luis; Kayser, Oliver; Bigler, Laurent; Martinoia, Enrico; Kretzschmar, Tobias (2016). Petunia hybrida PDR2 is involved in herbivore defense by controlling steroidal contents in trichomes. Plant, Cell & Environment, 39(12):2725-2739.

Das, A. Characterization of the PAO/phyllobilin Pathway of Chlorophyll Breakdown in Grasses. 2016, University of Zurich, Faculty of Science.

Dirren, Sebastian. The basal Opisthokonts Nuclearia spp. with associated bacterial symbionts: aspects of diversity and ecology. 2016, University of Zurich, Faculty of Science.

Sánchez-Martín, Javier; Montilla-Bascón, Gracia; Mur, Luis A J; Rubiales, Diego; Prats, Elena (2016). Compromised photosynthetic electron flow and H2O2 generation correlate with genotype-specific stomatal dysfunctions during resistance against powdery mildew in oats. Frontiers in Plant Science, 7:1660.

Sánchez-Martín, Javier; Steuernagel, Burkhard; Ghosh, Sreya; Herren, Gerhard; Hurni, Severine; Adamski, Nikolai; Vrána, Jan; Kubaláková, Marie; Krattinger, Simon G; Wicker, Thomas; Doležel, Jaroslav; Keller, Beat; Wulff, Brande B H (2016). Rapid gene isolation in barley and wheat by mutant chromosome sequencing. Genome Biology, 17(1):221.

Hauenstein, Mareike; Christ, Bastien; Das, Aditi; Aubry, Sylvain; Hörtensteiner, Stefan (2016). A role for TIC55 as a hydroxylase of phyllobilins, the products of chlorophyll breakdown during plant senescence. Plant Cell, 28(10):2510-2527.

Salcher, Michaela Maria; Šimek, Karel (2016). Isolation and cultivation of planktonic freshwater microbes is essential for a comprehensive understanding of their ecology. Aquatic Microbial Ecology, 77(3):183-196.

Hersemann, Lena. Characterization of Virulence Factors in Xanthomonas translucens pv. graminis. 2016, University of Zurich, Faculty of Science.

Schöneberg, Torsten; Martin, Charlotte; Wettstein, Felix E; Bucheli, Thomas D; Mascher, Fabio; Bertossa, Mario; Musa, Tomke; Keller, Beat; Vogelgsang, Susanne (2016). Fusarium and mycotoxin spectra in Swiss barley are affected by various cropping techniques. Food Additives & Contaminants. Part A, Chemistry, Analysis, Control, Exposure & Risk Assessment, 33(10):1608-1619.

Errafi, Sanae. Old Compounds but New Functions: Insights into Novel Modes of Action of Arabidopsis Flavonols and the Flavonol Synthase FLS1 in Modulating Cell Growth. 2016, University of Zurich, Faculty of Science.

Burri, Jan T; Chengzhi, Hu; Shamsudhin, Naveen; Wang, Xueqi; Vogler, Hannes; Grossniklaus, Ueli; Nelson, Bradley J (2016). Dual-axis Cellular Force Microscope for mechanical characterization of living plant cells. In: Automation Science and Engineering (CASE), 2016 IEEE International Conference on, Fort Worth, Texas, 21 August 2016 - 25 August 2016, 942-947.

Shamsudhin, Naveen; Atakan, Huseyin Baris; Laubli, Nino; Vogler, Hannes; Hu, Chengzhi; Sebastian, Abu; Grossniklaus, Ueli; Nelson, Bradley J (2016). Probing the micromechanics of the fastest growing plant cell — The pollen tube. In: Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the, Lake Buena Vista (Orlando), Florida USA, 16 August 2016 - 20 August 2016, 461-464.

Ben-David, Roi; Parks, Ryan; Dinoor, Amos; Kosman, Evsey; Wicker, Thomas; Keller, Beat; Cowger, Christina (2016). Differentiation among blumeria graminis f. sp.tritici isolates originating from wild versus domesticated triticum species in Israel. Phytopathology, 106(8):861-870.

Hassler, Sebastian; Jung, Benjamin; Lemke, Lilia; Novák, Ondřej; Strnad, Miroslav; Martinoia, Enrico; Neuhaus, H Ekkehard (2016). Function of the Golgi-located phosphate transporter PHT4;6 is critical for senescence-associated processes in Arabidopsis. Journal of Experimental Botany, 67(15):4671-4684.

Krattinger, Simon G; Keller, Beat (2016). Molecular genetics and evolution of disease resistance in cereals. New Phytologist, 212(2):320-332.

Jenul, C. The Role of Nitrosohydroxylamine Secondary Metabolites in Microbial Antagonism and Cell-Cell Communication in Burkholderia cenocepacia H111. 2016, University of Zurich, Faculty of Science.

Schilcher, Katrin. Antibiotic-Mediated Modulation of Staphylococcus aureus Virulence Factors. 2016, University of Zurich, Faculty of Science.

Borghi, Lorenzo; Liu, Guo-Wei; Emonet, Aurélia; Kretzschmar, Tobias; Martinoia, Enrico (2016). The importance of strigolactone transport regulation for symbiotic signaling and shoot branching. Planta, 243(6):1351-1360.

Bombarely, Aureliano; Moser, Michel; Amrad, Avichai; Bao, Manzhu; Bapaume, Laure; Barry, Cornelius S; Bliek, Mattijs; Boersma, Maaike R; Borghi, Lorenzo; Bruggmann, Rémy; Bucher, Marcel; D'Agostino, Nunzio; Davies, Kevin; Druege, Uwe; Dudareva, Natalia; Egea-Cortines, Marcos; Delledonne, Massimo; Fernandez-Pozo, Noe; Franken, Philipp; Grandont, Laurie; Heslop-Harrison, J S; Hintzsche, Jennifer; Johns, Mitrick; Koes, Ronald; Lv, Xiaodan; Lyons, Eric; Malla, Diwa; Martinoia, Enrico; Mattson, Neil S; Morel, Patrice; et al (2016). Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida. Nature Plants, 2(6):16074.

Zürcher, Evelyne. Characterization of the Arabidopsis Family of PURINE PERMEASES as Candidates for a Cytokinin Transport System. 2016, University of Zurich, Faculty of Science.

Roffler, Stefan. On the Impact of Transposon Activity on Genome Evolution. 2016, University of Zurich, Faculty of Science.

Bätz, Ulrike. Structure and Physiological Function of the Vacuolar Anion Channel ALMT9 in Arabidopsis thaliana and Vitis Vinifera. 2016, University of Zurich, Faculty of Science.

Baumgartner, Michael. Experimental Evolution of a Freshwater Isolate with Inducible Aggregate Formation – Genome Streamlining and Variability of Phenotypic Plasticity. 2016, University of Zurich, Faculty of Science.

Faltermann, Susanne. Cellular Uptake and Effects of Cyanobacterial Toxins in Zebrafish, Danio rerio. 2016, University of Zurich, Faculty of Science.

Singla, Jyoti. Genetic Characterization and High Resolution Analysis of Lr75: a Novel Adult Plant Leaf Rust Resistance Gene in Wheat. 2016, University of Zurich, Faculty of Science.

Hwang, Jae-Ung; Song, Won-Yong; Hong, Daewoong; Ko, Donghwi; Yamaoka, Yasuyo; Jang, Sunghoon; Yim, Sojeong; Lee, Eunjung; Khare, Deepa; Kim, Kyungyoon; Palmgren, Michael; Yoon, Hwan Su; Martinoia, Enrico; Lee, Youngsook (2016). Plant ABC transporters enable many unique aspects of a terrestrial plant's lifestyle. Molecular Plant, 9(3):338-355.

Kuhn, Benjamin M; Errafi, Sanae; Bucher, Rahel; Dobrev, Petre; Geisler, Markus; Bigler, Laurent; Zažímalová, Eva; Ringli, Christoph (2016). 7-Rhamnosylated flavonols modulate homeostasis of the plant hormone auxin and affect plant development. Journal of Biological Chemistry, 291(10):5385-5395.

Bheema Lingeswara Reddy, I N; Chandrasekhar, K; Zewdu, Y; Dinoor, A; Keller, B; Ben-David, R (2016). Identification and genetic mapping of PmAF7DS a powdery mildew resistance gene in bread wheat (Triticum aestivum L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 129(6):1127-1137.

Bourras, Salim; McNally, Kaitlin E; Müller, Marion C; Wicker, Thomas; Keller, Beat (2016). Avirulence Genes in Cereal Powdery Mildews: The Gene-for-Gene Hypothesis 2.0. Frontiers in Plant Science:7:241.

Lira, Bruno Silvestre; Rosado, Daniele; Almeida, Juliana; de Souza, Amanda Pereira; Buckeridge, Marcos Silveira; Purgatto, Eduardo; Guyer, Luzia; Hörtensteiner, Stefan; Freschi, Luciano; Rossi, Magdalena (2016). Pheophytinase knockdown impacts carbon metabolism and nutraceutical content under normal growth conditions in tomato. Plant & Cell Physiology, 57(3):642-653.

Pedrazzini, Emanuela; Caprera, Andrea; Fojadelli, Ilaria; Stella, Alessandra; Rocchetti, Alessandra; Bassin, Barbara; Martinoia, Enrico; Vitale, Alessandro (2016). The Arabidopsis tonoplast is almost devoid of glycoproteins with complex N-glycans, unlike the rat lysosomal membrane. Journal of Experimental Botany, 67(6):1769-1781.

Krattinger, Simon G; Keller, Beat (2016). Trapping the intruder — immune receptor domain fusions provide new molecular leads for improving disease resistance in plants. Genome Biology, 17(1):1-3.

Horrer, Daniel. Starch Metabolism in Guard Cells of Arabidopsis thaliana. 2016, University of Zurich, Faculty of Science.

Almeida, Juliana; et al; Guyer, Luzia; Hörtensteiner, Stefan; Rossi, Magdalena (2016). Down-regulation of tomato PHYTOL KINASE strongly impairs tocopherol biosynthesis and affects prenyllipid metabolism in an organ-specific manner. Journal of Experimental Botany, 67(3):919-934.

Singla, J; Krattinger, S G (2016). Biotic stress resistance genes in wheat. In: Wrigley, C W; Faubion, J; Corke, H; Seetharaman, K. Encyclopedia of Food Grains. Oxford: Elsevier, 388-392.

Mächler, Elvira; Deiner, Kristy; Spahn, Fabienne; Altermatt, Florian (2016). Fishing in the water: effect of sampled water volume on environmental dna-based detection of macroinvertebrates. Environmental Science & Technology, 50(1):305-312.

Sakuraba, Yasuhito; Han, Su-Hyun; Lee, Sang-Hwa; Hörtensteiner, Stefan; Paek, Nam-Chon (2016). Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription. Plant Cell Reports, 35(1):155-166.

Medeiros, David B; Martins, Samuel C V; Cavalcanti, João Henrique F; Daloso, Danilo M; Martinoia, Enrico; Nunes-Nesi, Adriano; DaMatta, Fábio M; Fernie, Alisdair R; Araújo, Wagner L (2016). Enhanced photosynthesis and growth in atquac1 knockout mutants are due to altered organic acid accumulation and an increase in both stomatal and mesophyll conductance. Plant Physiology, 170(1):86-101.

Inglis, R Fredrik; Biernaskie, Jay; Gardner, Andy; Kümmerli, Rolf (2016). Presence of a loner strain maintains cooperation and diversity in well-mixed bacterial communities. Proceedings of the Royal Society of London, Series B: Biological Sciences, 283(1822):20152682.

Glover, Natasha M; Antoniadi, Ioanna; George, Gavin M; Götzenberger, Lars; Gutzat, Ruben; Koorem, Kadri; Liancourt, Pierre; Rutowicz, Kinga; Saharan, Krishna; You, Wanhui; Mayer, Philipp (2016). A Pragmatic Approach to Getting Published: 35 Tips for Early Career Researchers. Frontiers in Plant Science:7:610.

Christ, Bastien; Hauenstein, Mareike; Hörtensteiner, Stefan (2016). A liquid chromatography-mass spectrometry platform for the analysis of phyllobilins, the major degradation products of chlorophyll in Arabidopsis thaliana. The Plant Journal, 88(3):505-518.

Müller, Lena M; Lindner, Heike; Pires, Nuno D; Gagliardini, Valeria; Grossniklaus, Ueli (2016). A subunit of the oligosaccharyltransferase complex is required for interspecific gametophyte recognition in Arabidopsis. Nature Communications, 7:10826.

De Sarkar, Suman; Blom, Judith F; Bethuel, Yann; Jüttner, Friedrich; Gademann, Karl (2016). Allelopathic Activity of the Iron Chelator Anachelin - A Molecular Hybrid with a Dual Mode of Action. Helvetica Chimica Acta, 99(10):760-773.

Sedeek, Khalid E M; Whittle, Edward; Guthörl, Daniela; Grossniklaus, Ueli; Shanklin, John; Schlüter, Philipp M (2016). Amino acid change in an Orchid desaturase enables mimicry of the pollinator’s sex pheromone. Current Biology, 26(11):1505-1511.

Schirdewahn, T; Mascher, M; Bucheli, T D; Bertossa, M; Musa, T; Wettstein, F E; Keller, B; Vogelsang, S (2016). Anbaufaktoren beeinflussen Fusarien und Mykotoxine in Schweizer Gerste. Agrarforschung Schweiz, 7(9):372-377.

Vale, Pedro; McNally, Luke; Doeschl-Wilson, Andrea; King, Kayla; Popat, Roman; Domingo-Sananes, Maria; Allen, Judith; Soares, Miguel; Kümmerli, Rolf (2016). Beyond killing: can we find new ways to manage infections? Evolution, Medicine, and Public Health, 2016(1):148-157.

Faltermann, Susanne; Grundler, Verena; Gademann, Karl; Pernthaler, Jakob; Fent, Karl (2016). Comparative effects of nodularin and microcystin-LR in zebrafish: 2. Uptake and molecular effects in eleuthero-embryos and adult liver with focus on endoplasmic reticulum stress. Aquatic Toxicology, 171:77-87.

Paape, Timothy; Hatakeyama, Masaomi; Shimizu-Inatsugi, Rie; Cereghetti, Teo; Onda, Yoshihiko; Kenta, Tanaka; Sese, Jun; Shimizu, Kentaro K (2016). Conserved but attenuated parental gene expression in allopolyploids: constitutive zinc hyperaccumulation in the allotetraploidArabidopsis kamchatica. Molecular Biology and Evolution:1-44.

Wicker, Thomas; Yu, Yeisoo; Haberer, Georg; Mayer, Klaus F X; Marri, Pradeep Reddy; Rounsley, Steve; Chen, Mingsheng; Zuccolo, Andrea; Panaud, Olivier; Wing, Rod A; Roffler, Stefan (2016). DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses. Nature Communications, 7:12790.

Suppiger, Angela; Aguilar, Claudio; Eberl, Leo (2016). Evidence for the widespread production of DSF family signal molecules by members of the genusBurkholderiaby the aid of novel biosensors. Environmental Microbiology Reports, 8(1):38-44.

Pinto-Carbó, Marta; Sieber, Simon; Dessein, Steven; Wicker, Thomas; Verstraete, Brecht; Gademann, Karl; Eberl, Leo; Carlier, Aurelien (2016). Evidence of horizontal gene transfer between obligate leaf nodule symbionts. The ISME journal, 10(9):2092-2105.

Kamber, Tim; Buchmann, Jan P; Pothier, Joël F; Smits, Theo H M; Wicker, Thomas; Duffy, Brion (2016). Fire blight disease reactome: RNA-seq transcriptional profile of apple host plant defense responses to Erwinia amylovora pathogen infection. Scientific Reports, 6:21600.

Khanday, Imtiyaz; Das, Sanjukta; Chongloi, Grace L; Bansal, Manju; Grossniklaus, Ueli; Vijayraghavan, Usha (2016). Genome-Wide Targets Regulated by the OsMADS1 Transcription Factor Reveals Its DNA Recognition Properties. Plant Physiology, 172(1):372-388.

Florez-Rueda, Ana M; Paris, Margot; Schmidt, Anja; Widmer, Alex; Grossniklaus, Ueli; Städler, Thomas (2016). Genomic Imprinting in the Endosperm Is Systematically Perturbed in Abortive Hybrid Tomato Seeds. Molecular Biology and Evolution, 33(11):2935-2946.

Horňák, Karel; Schmidheiny, Helen; Pernthaler, Jakob (2016). High-throughput determination of dissolved free amino acids in unconcentrated freshwater by ion-pairing liquid chromatography and mass spectrometry. Journal of Chromatography. A, 1440:85-93.

Kotliński, Maciej; Rutowicz, Kinga; Kniżewski, Łukasz; Palusiński, Antoni; Olędzki, Jacek; Fogtman, Anna; Rubel, Tymon; Koblowska, Marta; Dadlez, Michał; Ginalski, Krzysztof; Jerzmanowski, Andrzej (2016). Histone H1 Variants in Arabidopsis Are Subject to Numerous Post-Translational Modifications, Both Conserved and Previously Unknown in Histones, Suggesting Complex Functions of H1 in Plants. PLoS ONE, 11(1):e0147908.

Menardo, Fabrizio; Praz, Coraline R; Wyder, Stefan; Ben-David, Roi; Bourras, Salim; Matsumae, Hiromi; McNally, Kaitlin E; Parlange, Francis; Riba, Andrea; Roffler, Stefan; Schaefer, Luisa K; Shimizu, Kentaro K; Valenti, Luca; Zbinden, Helen; Wicker, Thomas; Keller, Beat (2016). Hybridization of powdery mildew strains gives rise to pathogens on novel agricultural crop species. Nature Genetics, 48(2):201-205.

Florez Rueda, Ana Marcela; Grossniklaus, Ueli; Schmidt, Anja (2016). Laser-assisted Microdissection (LAM) as a tool for transcriptional profiling of individual cell types. Journal of Visualized Experiments (Jove), 111:online.

Rövekamp, Moritz; Bowman, John L; Grossniklaus, Ueli (2016). Marchantia MpRKD Regulates the Gametophyte-Sporophyte Transition by Keeping Egg Cells Quiescent in the Absence of Fertilization. Current Biology, 26(13):1782-1789.

Shi, Gongjun; Zhang, Zengcui; Friesen, Timothy L; Bansal, Urmil; Cloutier, Sylvie; Wicker, Thomas; Rasmussen, Jack B; Faris, Justin D (2016). Marker development, saturation mapping, and high-resolution mapping of the Septoria nodorum blotch susceptibility gene Snn3-B1 in wheat. Molecular Genetics and Genomics, 291(1):107-119.

Shamsudhin, Naveen; Laeubli, Nino; Atakan, Huseyin Baris; Vogler, Hannes; Hu, Chengzhi; Haeberle, Walter; Sebastian, Abu; Grossniklaus, Ueli; Nelson, Bradley J (2016). Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform. PLoS ONE, 11(12):e0168138.

Geisler, Markus; Bailly, Aurélien; Ivanchenko, Maria (2016). Master and servant: Regulation of auxin transporters by FKBPs and cyclophilins. Plant Science, 245:1-10.

Vogler, Hannes; Martinez-Bernardini, Andrea; Grossniklaus, Ueli (2016). Maybe she's NOT the boss: male–female crosstalk during sexual plant reproduction. Genome Biology, 17(1):96.

Stopnisek, Nejc; Zühlke, Daniela; Carlier, Aurélien; Barberán, Albert; Fierer, Noah; Becher, Dörte; Riedel, Katharina; Eberl, Leo; Weisskopf, Laure (2016). Molecular mechanisms underlying the close association between soil Burkholderia and fungi. The ISME journal, 10(1):253-264.

Lüthi, C; Romeis, J; Mauch, F; Grossniklaus, U; Studer, B; Kohler, S (2016). Neue Pflanzenzüchtungstechniken für die Schweizer Landwirtschaft – grosses Potenzial, offene Zukunft. Bern: Akademien der Wisschenschaften Schwei / Swiss Academies Factsheets.

Hedhly, A; Wünsch, A; Kartal, Ö; Herrero, M; Hormaza, J I (2016). Paternal-specific S-allele transmission in sweet cherry (Prunus avium L.): the potential for sexual selection. Journal of Evolutionary Biology, 29(3):490-501.

Shimizu-Inatsugi, Rie; Terada, Aika; Hirose, Kyosuke; Kudoh, Hiroshi; Sese, Jun; Shimizu, Kentaro K (2016). Plant adaptive radiation mediated by polyploid plasticity in transcriptomes. Molecular Ecology:1-35.

Zurcher, E; Liu, J; di Donato, M; Geisler, M; Muller, B (2016). Plant development regulated by cytokinin sinks. Science, 353(6303):1027-1030.

Yankova, Yana; Villiger, Jörg; Pernthaler, Jakob; Schanz, Ferdinand; Posch, Thomas (2016). Prolongation, deepening and warming of the metalimnion change habitat conditions of the harmful filamentous cyanobacterium Planktothrix rubescens in a prealpine lake. Hydrobiologia, 776(1):125-138.

Dirren, Sebastian; Posch, Thomas (2016). Promiscuous and specific bacterial symbiont acquisition in the amoeboid genus Nuclearia (Opisthokonta). FEMS Microbiology Ecology, 92(8):fiw105.

Pires, Nuno D; Bemer, Marian; Müller, Lena M; Baroux, Célia; Spillane, Charles; Grossniklaus, Ueli (2016). Quantitative genetics identifies cryptic genetic variation involved in the paternal regulation of seed development. PLoS Genetics, 12(1):e1005806.

Hedhly, Afif; Vogler, Hannes; Schmid, Marc W; Pazmino, Diana; Gagliardini, Valeria; Santelia, Diana; Grossniklaus, Ueli (2016). Starch Turnover and Metabolism during Flower and Early Embryo Development. Plant Physiology, 172(4):2388-2402.

Zhu, Jinsheng; Bailly, Aurélien; Zwiewka, Marta; Sovero, Valpuri; di Donato, Martin; Ge, Pei; Oehri, Jacqueline; Aryal, Bibek; Hao, Pengchao; Linnert, Miriam; Burgardt, Noelia; Lücke, Christian; Weiwad, Matthias; Michel, Max; Weiergräber, Oliver H; Pollmann, Stephan; Azzarello, Elisa; Mancuso, Stefano; Ferro, Noel; Fukao, Yoichiro; Hoffmann, Celine; Wedlich-Söldner, Roland; Friml, Jiri; Thomas, Clement; Geisler, Markus (2016). TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics. Plant Cell, 28(4):930-948.

Suppiger, Angela; Eshwar, Athmanya Konegadde; Stephan, Roger; Kaever, Volkhard; Eberl, Leo; Lehner, Angelika (2016). The DSF type quorum sensing signalling system RpfF/R regulates diverse phenotypes in the opportunistic pathogen Cronobacter. Scientific Reports, 6:18753.

Carlier, Aurelien; Fehr, Linda; Pinto, Marta; Schäberle, Till; Reher, Raphael; Dessein, Steven; König, Gabriele; Eberl, Leo (2016). The genome analysis of Candidatus Burkholderia crenata reveals that secondary metabolism may be a key function of the Ardisia crenata leaf nodule symbiosis. Environmental Microbiology, 18(8):2507-2522.

Mathew, Anugraha; Jenul, Christian; Carlier, Aurelien L; Eberl, Leo (2016). The role of siderophores in metal homeostasis of members of the genus B urkholderia. Environmental Microbiology Reports, 8(1):103-109.

Krattinger, Simon G; Sucher, Justine; Selter, Liselotte L; Chauhan, Harsh; Zhou, Bo; Tang, Mingzhi; Upadhyaya, Narayana M; Mieulet, Delphine; Guiderdoni, Emmanuel; Weidenbach, Denise; Schaffrath, Ulrich; Lagudah, Evans S; Keller, Beat (2016). The wheat durable, multipathogen resistance geneLr34confers partial blast resistance in rice. Plant Biotechnology Journal, 14(5):1261-1268.

Gossmann, Toni I; Saleh, Dounia; Schmid, Marc W; Spence, Michael A; Schmid, Karl J (2016). Transcriptomes of Plant Gametophytes Have a Higher Proportion of Rapidly Evolving and Young Genes than Sporophytes. Molecular Biology and Evolution, 33(7):1669-1678.

Nestorova, Anna. Towards a function for a novel pollen-specific arabidopsis thaliana protein family DUF1216. 2015, University of Zurich, Faculty of Science.

Roffler, Stefan; Mendardo, Fabrizio; Wicker, Thomas (2015). The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants. Mobile DNA, 6(23):1-13.

Kümmerli, Rolf; Santorelli, Lorenzo; Granato, Elisa; Dumas, Zoe; Dobay, Akos; Griffin, Ashleigh; West, Stuart (2015). Co-evolutionary dynamics between public good producers and cheats in the bacterium Pseudomonas aeruginosa. Journal of Evolutionary Biology, 28(12):2264-2274.

Süssenbacher, Iris; Hörtensteiner, Stefan; Kräutler, Bernhard (2015). A Dioxobilin-Type Fluorescent Chlorophyll Catabolite as a Transient Early Intermediate of the Dioxobilin-Branch of Chlorophyll Breakdown in Arabidopsis thaliana. Angewandte Chemie Internationale Edition, 54(46):13777-13781.

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Bao, Kai. Novel organotypic modelling for the study of periodontal infection. 2015, University of Zurich, Faculty of Science.

Neuenschwander, Stefan. Functional Analysis of Pelagic Freshwater Microbes Based on Targeted Enrichment Approaches. 2015, University of Zurich, Faculty of Science.

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Cárcamo-Oyarce, Gerardo. Social Behaviors of Pseudomonas putida IsoF. 2015, University of Zurich, Faculty of Science.

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Mathew, Anugraha. Iron transport strategies of the genus Burkholderia. 2015, University of Zurich, Faculty of Science.

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Kohler, Esther. Structural characterization, bioactivity and biodegradation of cyanobacterial toxins. 2014, University of Zurich, Faculty of Science.

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Stojałowski, S; Kociuba, M; Stochmal, B; Kondzioła, M; Jaciubek, M (2008). Determining the plasmotypic structure of rye populations by SCAR markers. Journal of Applied Genetics, 49(3):229-232.

Tomescu, A M F; Honegger, R; Rothwell, G W (2008). Earliest fossil record of bacterial-cyanobacterial mat consortia: the early Silurian Passage Creek biota (440 Ma, Virginia, USA). Geobiology, 6(2):120-124.

Schnell Ramos, M. Exploring the role of the plant vacuole: the transporter associated with antigenic processing (TAP) transporter. 2008, University of Zurich, Faculty of Science.

Honegger, R; Aptroot, A (2008). Flechten im Botanischen Garten Zürich : 2008: 175 Jahre Universität Zürich : unser Beitrag zum Thema Wissen teilen. Zürich, CH: Vereinigung Freunde des Botanischen Gartens Zürich.

Baerenfaller, K; Grossmann, J; Grobei, M A; Hull, R; Hirsch-Hoffmann, M; Yalovsky, S; Zimmermann, P; Grossniklaus, U; Gruissem, W; Baginsky, S (2008). Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics. Science, 320(5878):938-941.

Schellenberg, B. Identification and characterisation of a novel class of proteasome inhibitors. 2008, University of Zurich, Faculty of Science.

Endler, A. Identification and characterisation of tonoplast transport systems using proteomic approaches. 2008, University of Zurich, Faculty of Science.

Seidl, K. Impact of the catabolite control protein CcpA in "Staphylococcus aureus". 2008, University of Zurich, Faculty of Science.

Hübscher, J. Investigations on factors modulating methicillin resistance in staphylococcus aureus. 2008, University of Zurich, Faculty of Science.

Shimizu, Kentaro K (2008). Letter from laboratories in foreign countries 9. International research environment grown in Switzerland: Institute of Plant Biology, University of Zurich. Society of Evolutionary Studies, Japan News, 9:10-16.

Park, J; Kim, Y Y; Martinoia, E; Lee, Y (2008). Long-distance transporters of inorganic nutrients in plants. Journal of Plant Biology, 51(4):240-247.

Ender, M. Molecular and functional charactersiation of the Swiss drug clone, a Methicillin-resistenter Staphylococcus aureus. 2008, University of Zurich, Faculty of Science.

Kaur, N; Street, K; Mackay, M; Yahiaoui, N; Keller, B (2008). Molecular approaches for characterization and use of natural disease resistance in wheat. European Journal of Plant Pathology, 121(3):387-397.

Honegger, R (2008). Morphogenesis. In: Nash, T H. Lichen biology (2nd ed.). Cambridge, UK: Cambridge University Press, 69-93.

Honegger, R (2008). Mycobionts. In: Nash, T H. Lichen biology (2nd ed.). Cambridge, UK: Cambridge University Press, 27-39.

Verrier, P J; Bird, D; Burla, B; Dassa, E; Forestier, C; Geisler, M; Klein, M; Kolukisaoglu, U; Lee, Y; Martinoia, E; Murphy, A; Rea, P A; Samuels, L; Schulz, B; Spalding, E J; Yazaki, K; Theodoulou, F L (2008). Plant ABC proteins - a unified nomenclature and updated inventory. Trends in Plant Science, 13(4):151-159.

Wopperer, J. Quorum sensing and virulence in members of the genus Burkholderia. 2008, University of Zurich, Faculty of Science.

Leiber, R M. ROL5: a potential regulator of ROS in Arabidopsis thaliana. 2008, University of Zurich, Faculty of Science.

Salcher, M M. Seasonality of bacterial phylotypes affected by bottom-up and top-down control in Piburger See, Austria. 2008, University of Zurich, Faculty of Science.

Honegger, R; Scherrer, S (2008). Sexual reproduction in lichen-forming ascomycetes. In: Nash, T H. Lichen biology (2nd ed.). Cambridge, UK: Cambridge University Press, 94-103.

Weisskopf, L; Le Bayon, R C; Kohler, F; Page, V; Jossi, M; Gobat, J M; Martinoia, E; Aragno, M (2008). Spatio-temporal dynamics of bacterial communities associated with two plant species differing in organic acid secretion: A one-year microcosm study on lupin and wheat. Soil Biology and Biochemistry, 40(7):1772-1780.

Tiaden, A; Spirig, T; Carranza, P; Brüggemann, H; Riedel, K; Eberl, L; Buchrieser, C; Hilbi, H (2008). Synergistic contribution of the Legionella pneumophila lqs genes to pathogen-host interactions. Journal of Bacteriology, 190(22):7532-7547.

Schellenberg, B; Ramel, C; Dudler, R (2008). Syringolin A: action on plants, regulation of biosynthesis, and phylogenetic occurrence of structurally related compounds. In: Fatmi, M; Collmer, A; Iacobellis, N S; Mansfield, J W; Murillo, J; Schaad, N W; Ullrich, M. Pseudomonas syringae pathovars and related pathogens - identification, epidemiology and genomics. Dordrecht, NL: Springer, 249-257.

Bemer, M; Wolters-Arts, M; Grossniklaus, U; Angenent, G C (2008). The MADS domain protein DIANA acts together with AGAMOUS-LIKE80 to specify the central cell in Arabidopsis ovules. Plant Cell, 20(8):2088-2101.

Evans, M M S; Grossniklaus, U (2008). The Maize megagametophyte. In: Bennetzen, J; Hake, S. Handbook of Maize: Its Biology. New York, N.Y., US: Springer, 79-104.

Schönmann, S. The genus Burkholderia: characterization of antifungal actions and development of a taxonomic microarray. 2008, University of Zurich, Faculty of Science.

Baroux, C; Autran, D; Gillmor, C S; Grimanelli, D; Grossniklaus, U (2008). The maternal to zygotic transition in animals and plants. Cold Spring Harbor Symposia on Quantitative Biology, 73:89-100.

Ringli, C; Bigler, L; Kuhn, B M; Leiber, R M; Diet, A; Santelia, D; Frey, Beat; Pollmann, S; Klein, M (2008). The modified Flavonol glycosylation profile in the Arabidopsis rol1 mutants results in alterations in plant growth and cell shape formation. Plant Cell, 20(6):1470-1481.

Shimizu, Kentaro K (2007). Ecologist@world, No. 8. From postdoc in the USA to the lab start up in Switzerland. Japanese Journal of Ecology, 57(3):432-437.

Plant Evolution. Edited by: Shimizu, Kentaro K; Mitsuyasu, Hasebe (2007). Tokyo: Shujunsha.

Higashiyama, Tetsui; Inatsugi, Rie; Sakamoto, Sachio; Sasaki, Narie; Mori, Toshiyuki; Kuroiwa, Haruko; Nakada, Takashi; Nozaki, Hisayoshi; Kuroiwa, Tsuneyoshi; Nakano, Akihiko (2006). Species preferentiality of the pollen tube attractant derived from the synergid cell of Torenia fournieri. Plant physiology, 142:481-491.

Lihova, Judita; Shimizu, Kentaro K; Marhold, Karol (2006). Allopolyploid origin of Cardamine asarifolia (Brassicaceae): incongruence between plastid and nuclear ribosomal DNA sequences solved by a single-copy nuclear gene. Molecular Phylogenetics and Evolution, 39(3):759-786.

Shimizu, Kentaro K (2006). Evolutionary genomics (evolutionary and ecological functional genomics): The power of Arabidopsis thaliana to study adaptive evolution. Japanese Journal of Ecology, 56:28-46.

Wicker, T; Schlagenhauf, E; Graner, A; Close, T J; Keller, B; Stein, N (2006). 454 sequencing put to the test using the complex genome of barley. BMC Genomics, 7:27.

Inatsugi, Rie; Sasaki, Narie; Kotake, Toshihisa; Tsumuraya, Yoichi; Kuroiwa, Tsuneyoshi; Nakano, Akihiko; Higashiyama, Tetsuya (2006). AMOR, a 70-kDa protein from the ovule, induces competence of the pollen tube to respond to the final-step guidance. Journal of Plant Research, 119:169-170.

Shimizu, Kentaro K; Purugganan, Michael D (2006). Arabidopsis as a model organism in evolutionary genetics. In: Fox, Charles W; Wolf, Jason B. Evolutionary Genetics: Concepts And Case Studies. New York: Oxford Univ Press, 453-455.

Higashiyama, Tetsuya; Inatsugi, Rie (2006). Comparative analysis of biological models used in the Study of Pollen Tube Growth. In: Malho, Rui. The Pollen Tube. Berlin, Heidelberg: Springer, 265-286.

Inatsugi, Rie; Higashiyama, Tetsuya; Ueda, Takashi (2006). Instruction for optical microscopes. In: Fukuda, Hiroo; Nishimura, Mikio; Nakano, Akihiko. New Edition: protocols to observe plant cells. Tokyo: Shujunsha, 31-34.

Inatsugi, Rie; Higashiyama, Tetsuya; Ueda, Takashi (2006). Overview of microscopes: history of the technological advance and the usage of diverse microscopes. In: Fukuda, Hiroo; Nishimura, Mikio; Nakano, Akihiko. New Edition: protocols to observe plant cells. Tokyo: Shujunsha, 26-30.

Shimizu, Kentaro K (2005). Evolutionary genomics confirmed Darwin's selfing model: An adaptation revealed by DNA analysis. Protein, Nucleic Acid and Enzyme, 50(8):966-977.

Shimizu, Kentaro K; Purugganan, Michael D (2005). Evolutionary and ecological genomics of Arabidopsis. Plant Physiology, 138(2):578-584.

Shimizu, Kentaro K; Okada, Kiyotaka; Kudoh, Hiroshi; Purugganan, Michael D (2005). Arabidopsis and related species as models to study speciation. Genes & Genetic Systems, 80(6):442.

Shimizu, Kentaro K; Fuji, Shinji; Marhold, Karol; Watanabe, Kuniaki; Kudoh, Hiroshi (2005). Arabidopsis kamchatica (Fisch. ex DC.) К. Shimizu & Kudoh and A. kamchatica subsp. kawasakiana (Makino) K. Shimizu & Kudoh, New Combinations. Acta Phytotaxonomica et Geobotanica, 56(2):163-172.

Shimizu, Kentaro K; Purugganan, Michael D (2005). Evolutionary genomics supported Darwin's hypothesis about the evolution of selfing. Genes & Genetic Systems, 80(6):431.

Ariizumi, Tohru; Hatakeyama, Katsunori; Hinata, Kokichi; Inatsugi, Rie; Nishida, Ikuo; Sato, Shusei; Kato, Tomohiko; Tabata, Satoshi; Toriyama, Kinya (2004). Disruption of the novel plant protein NEF1 affects lipid accumulation in the plastids of the tapetum and exine formation of pollen, resulting in male sterility in Arabidopsis thaliana. The Plant Journal, 39:170-181.

Martinelli, D; Grossmann, G; Séquin, U; Brandl, H; Bachofen, R (2004). Effects of natural and chemically synthesized furanones on quorum sensing in Chromobacterium violaceum. BMC Microbiology, 4:25.

Kanaoka, Masahiro; Shimizu, Kentaro K; Okada, Kiyotaka (2004). KOMPEITO is essential for the sculpture of pollen wall and callose accumulation in Arabidopsis thaliana. Nippon Shokubutsu Seiri Gakkai Nenkai ayobi Shinpojiumu Koen Yshishu 45, University of Zurich.

Kanaoka, Masahiro; Shimizu, Kentaro K; Okada, Kiyotaka (2003). Genetic analysis of the male-female interactions between male and female tissues in Arabidopsis. Plant & Cell Physiology, 44:S21.

Takagi, Taro; Nakamura, Masanobu; Hayashi, Hiroaki; Inatsugi, Rie; Yano, Ryoichi; Nishida, Ikuo (2003). The leaf-order-dependent enhancement of freezing tolerance in cold-acclimated Arabidopsis rosettes is not correlated with the transcript levels of the cold-inducible transcription factors of CBF/DREB1. Plant & Cell Physiology, 44(9):922-931.

da Costa-Nunes, J A; Grossniklaus, U (2003). Unveiling the gene-expression profile of pollen. Genome Biology, 5:20.

Shimizu, Kentaro K (2002). Ecology meets molecular genetics in Arabidopsis. Population Ecology, 44(3):221-233.

Shimizu, Kentaro K (2002). A dream beyond scientific fields: in the special issue "how is the life as a scientist?". Science Journal Kagaku, 72(4):470-471.

Ariizumi, Tohru; Kishitani, Sachie; Inatsugi, Rie; Nishida, Ikuo; Murata, Norio; Toriyama, Kinya (2002). An increase in unsaturation of fatty acids in posphatidylglycerol from leaves improves the rates of photosynthesis and growth at low temperatures in transgenic rice seedlings. Plant & Cell Physiology, 43(7):751-758.

Kenta, Tanaka; Shimizu, Kentaro K; Nakagawa, Michiko; Okada, Kiyotaka; Hamid, Abang A; Nakashizuka, Tohru (2002). Multiple factors contribute to outcrossing in a tropical emergent Dipterocarpus tempehes, including a new pollen-tube guidance mechanism for self-incompatibility. American Journal of Botany, 89(1):60-66.

Inatsugi, Rie; Nakamura, Masanobu; Nishida, Ikuo (2002). Phosphatidylcholine biosynthesis at low temperature: differential expression of CTP:phosphorylcholine cytidylyltransferase in Arabidopsis thaliana. Plant & Cell Physiology, 43(11):1342-1350.

Kanaoka, Masahiro; Shimizu, Kentaro K; Okada, Kiyotaka (2001). Genetic dissection of signal exchange between male and female reproductive organs in Arabidopsis. Plant & Cell Physiology, 42:S42.

This list was generated on Sun Jul 23 22:13:05 2017 CEST.