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Burri, Jan T; Chengzhi, Hu; Shamsudhin, Naveen; Wang, Xueqi; Vogler, Hannes; Grossniklaus, Ueli; Nelson, Bradley J (2016). Dual-axis Cellular Force Microscope for mechanical characterization of living plant cells. In: Automation Science and Engineering (CASE), 2016 IEEE International Conference on, Fort Worth, Texas, 21 August 2016 - 25 August 2016, 942-947.

Zhu, Z; Frey, O; Hierlemann, A (2011). Microfluidic single-cell culture chip for individual trapping, cultivation, and selective release of yeast cells. In: 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences, Seattle, Washington, USA, 2 October 2011 - 6 October 2011.

Blumer, Clemens; Vivien, Cyprien; Oertner, Thomas G; Vetter, Thomas (2011). Fluorescence Image Segmentation by using Digitally Reconstructed Fluorescence Images. In: Microscopic Image Analysis with Applications in Biology, Heidelberg, Germany, 2 September 2011 - 2 September 2011.

Koumoutsakos, P; Bayati, B; Milde, F; Tauriello, G (2011). Particle simulations of morphogenesis. Mathematical Models and Methods in Applied Sciences, 21(Supp. 1):955-1006.

Kozak, K; Bauch, A; Pylak, T; Rinn, B (2010). Towards a comprehensive open source platform for management and analysis of High Content Screening data. European Pharmaceutical Review, 4:34-38.

Polyansky, Anton A; Ramaswamy, Rajesh; Volynsky, Pavel E; Sbalzarini, Ivo F; Marrink, Siewert J; Efremov, Roman G (2010). Antimicrobial Peptides Induce Growth of Phosphatidylglycerol Domains in a Model Bacterial Membrane. Journal of Physical Chemistry Letters, 1(20):3108-3111.

Szabad, János (2010). Putting together rather than taking apart. EMBO Reports, 11(12):904-906.

Yes, the item has been refereed.

Hu, Chengzhi; Munglani, Gautam; Vogler, Hannes; Ndinyanka Fabrice, Tohnyui; Shamsudhin, Naveen; Wittel, Falk K; Ringli, Christoph; Grossniklaus, Ueli; Herrmann, Hans J; Nelson, Bradley J (2017). Characterization of size-dependent mechanical properties of tip-growing cells using a lab-on-chip device. Lab on a chip, 17(1):82-90.

Shamsudhin, Naveen; Atakan, Huseyin Baris; Laubli, Nino; Vogler, Hannes; Hu, Chengzhi; Sebastian, Abu; Grossniklaus, Ueli; Nelson, Bradley J (2016). Probing the micromechanics of the fastest growing plant cell — The pollen tube. In: Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the, Lake Buena Vista (Orlando), Florida USA, 16 August 2016 - 20 August 2016, 461-464.

Shamsudhin, Naveen; Laeubli, Nino; Atakan, Huseyin Baris; Vogler, Hannes; Hu, Chengzhi; Haeberle, Walter; Sebastian, Abu; Grossniklaus, Ueli; Nelson, Bradley J (2016). Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform. PLoS ONE, 11(12):e0168138.

Spühler, Isabelle A; Conley, Gaurasundar M; Scheffold, Frank; Sprecher, Simon G (2016). Super resolution imaging of genetically labeled synapses in drosophila brain tissue. Frontiers in Cellular Neuroscience:10:142.

Smith, Kevin; Li, Yunpeng; Piccinini, Filippo; Csucs, Gabor; Balazs, Csaba; Bevilacqua, Alessandro; Horvath, Peter (2015). CIDRE: an illumination-correction method for optical microscopy. Nature Methods, 12(5):404-406.

Munglani, Gautam; Vetter, Roman; Wittel, Falk K; Herrmann, Hans J (2015). Orthotropic rotation-free thin shell elements. Computational Mechanics, 56(5):785-793.

Bonde, Marie Mi; Voegeli, Sylvia; Baudrimont, Antoine; Seraphin, Bertrand; Becskei, Attila (2014). Quantification of pre-mRNA escape rate and synergy in splicing. Nucleic Acids Research, 42(20):12847-12860.

Sévin, Daniel C; Sauer, Uwe (2014). Ubiquinone accumulation improves osmotic-stress tolerance in Escherichia coli. Nature Chemical Biology, 10(4):266-272.

Quinodoz, Mathieu; Gobet, Cédric; Naef, Felix; Gustafson, Kyle B (2014). Characteristic bimodal profiles of RNA polymerase II at thousands of active mammalian promoters. Genome Biology, 15(6):R85.

Goldie, Kenneth N; Abeyrathne, Priyanka; Kebbel, Fabian; Chami, Mohamed; Ringler, Philippe; Stahlberg, Henning (2014). Cryo-electron microscopy of membrane proteins. Methods in Molecular Biology, 1117:325-41.

Giss, Dominic; Kemmerling, Simon; Dandey, Venkata; Stahlberg, Henning; Braun, Thomas (2014). Exploring the interactome: microfluidic isolation of proteins and interacting partners for quantitative analysis by electron microscopy. Analytical Chemistry, 86(10):4680-4687.

Gilardi, Federica; Migliavacca, Eugenia; Naldi, Aurélien; Baruchet, Michaël; Canella, Donatella; Le Martelot, Gwendal; Guex, Nicolas; Desvergne, Béatrice (2014). Genome-Wide Analysis of SREBP1 Activity around the Clock Reveals Its Combined Dependency on Nutrient and Circadian Signals. PLoS Genetics, 10(3):e1004155.

Kowal, Julia; Chami, Mohamed; Baumgartner, Paul; Arheit, Marcel; Chiu, Po-Lin; Rangl, Martina; Scheuring, Simon; Schröder, Gunnar F; Nimigean, Crina M; Stahlberg, Henning (2014). Ligand-induced structural changes in the cyclic nucleotide-modulated potassium channel MloK1. Nature Communications, 5:3106.

Feller, Chrystel; Gabriel, Jean-Pierre; Mazza, Christian; Yerly, Florence (2014). Pattern formation in auxin flux. Journal of Mathematical Biology, 68(4):879-909.

Bonhoure, N; Bounova, G; Bernasconi, D; Praz, V; Lammers, F; Canella, D; Willis, I M; Herr, W; Hernandez, N; Delorenzi, M; Hernandez, N; Delorenzi, M; Deplancke, B; Desvergne, B; Guex, N; Herr, W; Naef, F; Rougemont, J; Schibler, U; Andersin, T; Cousin, P; Gilardi, F; Gos, P; Lammers, F; Raghav, S; Villeneuve, D; Fabbretti, R; Vlegel, V; Xenarios, I; Migliavacca, E; Praz, V; David, F; Jarosz, Y; Kuznetsov, D; Liechti, R; Martin, O; Delafontaine, J; Cajan, J; Gustafson, K; Krier, I; Leleu, M; Molina, N; Naldi, A; Rib, L; Symul, L; Bounova, G (2014). Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization. Genome Research, 24(7):1157-1168.

Bernard, Thomas; Bridge, Alan; Morgat, Anne; Moretti, Sébastien; Xenarios, Ioannis; Pagni, Marco (2014). Reconciliation of metabolites and biochemical reactions for metabolic networks. Briefings in Bioinformatics, 15(1):123-135.

Moharana, Kedar; Zabeau, Lennart; Peelman, Frank; Ringler, Philippe; Stahlberg, Henning; Tavernier, Jan; Savvides, Savvas N (2014). Structural and mechanistic paradigm of leptin receptor activation revealed by complexes with wild-type and antagonist leptins. Structure, 22(6):866-877.

Baresic, M; Salatino, S; Kupr, B; van Nimwegen, E; Handschin, C (2014). Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1 in the regulation of the hypoxic gene program. Molecular and Cellular Biology, 34(16):2996-3012.

Ramakrishnan, Chandrasekhar; Bieri, Andrej; Sauter, Nora; Roizard, Sophie; Ringler, Philippe; Müller, Shirley A; Goldie, Kenneth N; Enimanev, Kaloyan; Stahlberg, Henning; Rinn, Bernd; Braun, Thomas (2014). openBEB: open biological experiment browser for correlative measurements. BMC Bioinformatics, 15:84.

Leppänen, Veli-Matti; Tvorogov, Denis; Kisko, Kaisa; Prota, Andrea E; Jeltsch, Michael; Anisimov, Andrey; Markovic-Mueller, Sandra; Stuttfeld, Edward; Goldie, Kenneth N; Ballmer-Hofer, Kurt; Alitalo, Kari (2013). Structural and mechanistic insights into VEGF receptor 3 ligand binding and activation. Proceedings of the National Academy of Sciences of the United States of America, 110(32):12960-12965.

Woodruff, Kristina; Fidalgo, Luis M; Gobaa, Samy; Lutolf, Matthias P; Maerkl, Sebastian J (2013). Live Mammalian Cell Arrays. Nature Methods, 10(6):550-552.

Arnold, Phil; Schöler, Anne; Pachkov, Mikhail; Balwierz, Piotr J; Jørgensen, Helle; Stadler, Michael B; van Nimwegen, Erik; Schübeler, Dirk (2013). Modeling of epigenome dynamics identifies transcription factors that mediate Polycomb targeting. Genome Research, 23:60-73.

Loizides-Mangold, Ursula (2013). On the future of mass-spectrometry-based lipidomics. FEBS Journal, 280:2817-2829.

Andreasen, Sidsel Ø; Chong, Siow-Feng; Wohl, Benjamin M; Goldie, Kenneth N; Zelikin, Alexander N (2013). Poly(vinyl alcohol) physical hydrogel nanoparticles, not polymer solutions, exert inhibition of nitric oxide synthesis in cultured macrophages. Biomacromolecules, 14(5):1687-95.

Sunnåker, Mikael; Zamora-Sillero, Elias; Dechant, Reinhard; Ludwig, Christina; Busetto, Alberto Giovanni; Wagner, Andreas; Stelling, Joerg (2013). Automatic Generation of Predictive Dynamic Models Reveals Nuclear Phosphorylation as the Key Msn2 Control Mechanism. Science Signaling, 6(277):ra41.

de Mazancourt, Claire; Isbell, Forest; Larocque, Allen; Berendse, Frank; De Luca, Enrica; Grace, James B; Haegeman, Bart; Polley, H Wayne; Roscher, Christiane; Schmid, Bernhard; Tilman, David; van Ruijven, Jasper; Weigelt, Alexandra; Wilsey, Brian J; Loreau, Michel (2013). Predicting ecosystem stability from community composition and biodiversity. Ecology Letters, 16(5):617-625.

Vonaesch, Pascale; Cardini, Steven; Sellin, Mikael E; Goud, Bruno; Hardt, Wolf-Dietrich; Schauer, Kristine (2013). Quantitative insights into actin rearrangements and bacterial target site selection fromSalmonella Typhimurium infection of micropatterned cells. Cellular Microbiology, 15(11):1851-1865.

Shimobayash, Mitsugu; Oppliger, Wolfgang; Moes, Suzette; Jenö, Paul; Hall, Michael N (2013). TORC1-regulated protein kinase Npr1 phosphorylates Orm to stimulate complex sphingolipid synthesis. Molecular Biology of the Cell, 24:870-881.

Zartman, Jeremiah; Restrepo, Simon; Basler, Konrad (2013). A high-throughput template for optimizing Drosophila organ culture with response-surface methods. Development, 140(3):667-674.

Weidmann, Simon; Barylyuk, Konstantin; Nespovitaya, Nadezhda; Mädler, Stefanie; Zenobi, Renato (2013). A New, Modular Mass Calibrant for High-Mass MALDI-MS. Analytical Chemistry, 85:3425-3432.

Tiwari, Neha; Meyer-Schaller, Nathalie; Arnold, Phil; Antoniadis, Helena; Pachkov, Mikhail; van Nimwegen, Erik; Christofori, Gerhard (2013). Klf4 Is a Transcriptional Regulator of Genes Critical for EMT, Including Jnk1 (Mapk8). PLoS ONE, 8(2):1-17.

Prota, Andrea E; Bargsten, Katja; Zurwerra, Didier; Field, Jessica J; Díaz, José Fernando; Altmann, Karl-Heinz; Steinmetz, Michel O (2013). Molecular Mechanism of Action of Microtubule-Stabilizing Anticancer Agents. Science, 339(6119):587-590.

Simicevic, Jovan; Schmid, Adrien W; Gilardoni, Paola A; Zoller, Benjamin; Raghav, Sunil K; Krier, Irina; Gubelmann, Carinne; Lisacek, Frédérique; Naef, Felix; Moniatte, Marc; Deplancke, Bart (2013). Absolute quantification of transcription factors during cellular differentiation using multiplexed targeted proteomics. Nature Methods, 10(6):570-576.

Chen, Jerry L; Carta, Stefano; Soldado-Magraner, Joana; Schneider, Bernard L; Helmchen, Fritjof (2013). Behaviour-dependent recruitment of long-range projection neurons in somatosensory cortex. Nature, 499(7458):336-340.

Goepfert, Arnaud; Stanger, Frédéric V; Dehio, Christoph; Schirmer, Tilman (2013). Conserved Inhibitory Mechanism and Competent ATP Binding Mode for Adenylyltransferases with Fic Fold. PLoS ONE, 8(5):e64901.

Paul, Grégory; Cardinale, Janick; Sbalzarini, Ivo F (2013). Coupling Image Restoration and Segmentation: A Generalized Linear Model/Bregman Perspective. International Journal of Computer Vision, 104(1):69-93.

Lemgruber, Leandro; Kudryashev, Mikhail; Dekiwadia, Chaitali; Riglar, David T; Baum, Jake; Stahlberg, Henning; Ralph, Stuart A; Frischknecht, Friedrich (2013). Cryo-electron tomography reveals four-membrane architecture of the Plasmodium apicoplast. Malaria Journal, 12:25.

Pacheco-Villalobos, David; Sankar, Martial; Ljung, Karin; Hardtke, Christian S (2013). Disturbed Local Auxin Homeostasis Enhances Cellular Anisotropy and Reveals Alternative Wiring of Auxin-ethylene Crosstalk in Brachypodium distachyon Seminal Roots. PLoS Genetics, 9(6):e1003564.

Grasso, Luigino; Wyss, Romain; Piguet, Joachim; Werner, Michael; Hassaïne, Ghérici; Hovius, Ruud; Vogel, Horst (2013). Downscaling the analysis of complex transmembrane signaling cascades to closed attoliter volumes. PLoS ONE, 8(8):e70929.

Kudryashev, M; Stenta, M; Schmelz, S; Amstutz, M; Wiesand, U; Castano-Diez, D; Degiacomi, M T; Munnich, S; Bleck, C K; Kowal, J; Diepold, A; Heinz, D W; Dal Peraro, M; Cornelis, G R; Stahlberg, H (2013). In situ structural analysis of the Yersinia enterocolitica injectisome. eLife, 2:e00792-e00792.

Stergiou, Lilli; Bauer, Manuel; Mair, Waltraud; Bausch-Fluck, Damaris; Drayman, Nir; Wollscheid, Bernd; Oppenheim, Ariella; Pelkmans, Lucas (2013). Integrin-Mediated Signaling Induced by Simian Virus 40 Leads to Transient Uncoupling of Cortical Actin and the Plasma Membrane. PLoS ONE, 8(2):e55799.

Tiwari, Neha; Meyer-Schaller, Nathalie; Arnold, Phil; Antoniadis, Helena; Pachkov, Mikhail; van Nimwegen, Erik; Christofori, Gerhard (2013). Klf4 is a transcriptional regulator of genes critical for EMT, including Jnk1 (Mapk8). PLoS ONE, 8(2):e57329.

Sarraf-Zadeh, Ladan; Christen, Stefan; Sauer, Uwe; Cognigni, Paola; Miguel-Aliaga, Irene; Stocker, Hugo; Köhler, Katja; Hafen, Ernst (2013). Local requirement of the Drosophila insulin binding protein imp-L2 in coordinating developmental progression with nutritional conditions. Developmental Biology, 381(1):97-106.

Sbalzarini, Ivo F (2013). Modeling and simulation of biological systems from image data. BioEssays, 35(5):482-490.

Busetto, Alberto Giovanni; Hauser, Alain; Krummenacher, Gabriel; Sunnåker, Mikael; Dimopoulos, Sotiris; Ong, Cheng Soon; Stelling, Jörg; Buhmann, Joachim M (2013). Near-optimal experimental design for model selection in systems biology. Bioinformatics:online.

Steeb, Benjamin; Claudi, Beatrice; Burton, Neil A; Tienz, Petra; Schmidt, Alexander; Farhan, Hesso; Mazé, Alain; Bumann, Dirk (2013). Parallel Exploitation of Diverse Host Nutrients Enhances Salmonella Virulence. PLoS Pathogens, 9(4):e1003301.

Hohm, Tim; Preuten, Tobias; Fankhauser, Christian (2013). Phototropism: Translating light into directional growth. American Journal of Botany, 100(1):47-59.

Pessi, Gabriella; Braunwalder, Rubina; Grunau, Alexander; Omasits, Ulrich; Ahrens, Christian H; Eberl, Leo (2013). Response of Burkholderia cenocepacia H111 to Micro-Oxia. PLoS ONE, 8(9):e72939.

Kemmerling, Simon; Arnold, Stefan A; Bircher, Benjamin A; Sauter, Nora; Escobedo, Carlos; Dernick, Gregor; Hierlemann, Andreas; Stahlberg, Henning; Braun, Thomas (2013). Single-cell lysis for visual analysis by electron microscopy. Journal of Structural Biology, 183(3):467-73.

Tiwari, Neha; Tiwari, Vijay K; Waldmeier, Lorenz; Balwierz, Piotr J; Arnold, Phil; Pachkov, Mikhail; Meyer-Schaller, Nathalie; Schübeler, Dirk; van Nimwegen, Erik; Christofori, Gerhard (2013). Sox4 is a master regulator of epithelial-mesenchymal transition by controlling ezh2 expression and epigenetic reprogramming. Cancer Cell, 23(6):768-83.

Delgado-Gonzalo, R; Unser, M (2013). Spline-based framework for interactive segmentation in biomedical imaging. IRBM, 34(3):235-243.

Schmutz, Christoph; Ahrne, Erik Lennart; Kasper, Christoph Alexander; Tschon, Therese; Sorg, Isabel; Dreier, Roland Felix; Schmidt, Alexander; Arrieumerlou, Cecile (2013). Systems-level overview of host protein phosphorylation during Shigella flexneri infection revealed by phosphoproteomics. Molecular & Cellular Proteomics, 12(10):2952-2968.

Zampar, Guillermo G; Kümmel, Anne; Ewald, Jennifer; Jol, Stefan; Niebel, Bastian; Picotti, Paola; Aebersold, Ruedi; Sauer, Uwe; Zamboni, Nicola; Heinemann, Matthias (2013). Temporal system-level organization of the switch from glycolytic to gluconeogenic operation in yeast. Molecular Systems Biology, 9:online.

Limenitakis, Julien; Oppenheim, Rebecca D; Creek, Darren J; Foth, Bernardo J; Barrett, Michael P; Soldati-Favre, Dominique (2013). The 2-methylcitrate cycle is implicated in the detoxification of propionate in Toxoplasma gondii. Molecular Microbiology, 87(4):894-908.

Handke, Björn; Poernbacher, Ingrid; Goetze, Sandra; Ahrens, Christian H; Omasits, Ulrich; Marty, Florian; Simigdala, Nikiana; Meyer, Imke; Wollscheid, Bernd; Brunner, Erich; Hafen, Ernst; Lehner, Christian F (2013). The hemolymph proteome of fed and starved Drosophila larvae. PLoS ONE, 8(6):e67208.

Vogler, Hannes; Draeger, Christian; Weber, Alain; Felekis, Dimitris; Eichenberger, Christof; Routier-Kierzkowska, Anne-Lise; Boisson-Dernier, Aurélien; Ringli, Christoph; Nelson, Bradley J; Smith, Richard S; Grossniklaus, Ueli (2013). The pollen tube: a soft shell with a hard core. The Plant Journal, 73(4):617-627.

Varjosalo, Markku; Keskitalo, Salla; Van Drogen, Audrey; Nurkkala, Helka; Vichalkovski, Anton; Aebersold, Ruedi; Gstaiger, Matthias (2013). The protein interaction landscape of the human CMGC kinase group. Cell Reports, 3(4):1306-20.

Schmidt, Florian Ingo; Bleck, Christopher Karl Ernst; Reh, Lucia; Novy, Karel; Wollscheid, Bernd; Helenius, Ari; Stahlberg, Henning; Mercer, Jason (2013). Vaccinia virus entry is followed by core activation and proteasome-mediated release of the immunomodulatory effector VH1 from lateral bodies. Cell Reports, 4(3):464-476.

Piccinini, Filippo; Bevilacqua, Alessandro; Smith, Kevin; Horvath, Peter (2013). Vignetting and photo-bleaching correction in automated fluorescence microscopy from an array of overlapping images. In: 10th IEEE International Symposium on Biomedical Imaging (ISBI), San Francisco, CA, U.S.A. , 2013 - 2013.

Blaskovic, Sanja; Blanc, Mathieu; van der Goot, F Gisou (2013). What does S-palmitoylation do to membrane proteins? FEBS Journal, 280(12):2766-2774.

Kiefer, P; Schmitt, U; Vorholt, J A (2013). eMZed: an open source framework in Python for rapid and interactive development of LC/MS data analysis workflows. Bioinformatics, 29(7):963-964.

Mary, Camille; Duek, Paula; Salleron, Lisa; Tienz, Petra; Bumann, Dirk; Bairoch, Amos; Lane, Lydie (2012). Functional Identification of APIP as Human mtnB, a Key Enzyme in the Methionine Salvage Pathway. PLoS ONE, 7(12):e52877.

van der Westen, Rebecca; Hosta-Rigau, Leticia; Sutherland, Duncan S; Goldie, Kenneth N; Albericio, Fernando; Postma, Almar; Städler, Brigitte (2012). Myoblast cell interaction with polydopamine coated liposomes. Biointerphases, 7(1-4):8.

Rockel, Sylvie; Geertz, Marcel; Hens, Korneel; Deplancke, Bart; Maerkl, Sebastian J (2012). iSLIM: a comprehensive approach to mapping and characterizing gene regulatory networks. Nucleic Acids Research:1-8.

Geertz, Marcel; Shore, David; Maerkl, Sebastian J (2012). Massively parallel measurements of molecular interaction kinetics on a microfluidic platform. Proceedings of the National Academy of Sciences of the United States of America, 109(41):16540-16545.

Yakimovich, A; Gumpert, H; Burckhardt, C J; Lutschg, V A; Jurgeit, A; Sbalzarini, I F; Greber, U F (2012). Cell-free transmission of human adenovirus by passive mass transfer in cell culture simulated in a computer model. Journal of Virology, 86(18):10123-10137.

Weidmann, Simon; Kemmerling, Simon; Mädler, Stefanie; Stahlberg, Henning; Braun, Thomas; Zenobi, Renato (2012). Ionic Liquids as Matrices in MicrofluidicSample Deposition for High-mass Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry. European Journal of Mass Spectrometry, 18:279-286.

Schröter, Christian; Ares, Saúl; Morelli, Luis G; Isakova, Alina; Hens, Korneel; Soroldoni, Daniele; Gajewski, Martin; Jülicher, Frank; Maerkl, Sebastian J; Deplancke, Bart; Oates, Andrew C (2012). Topology and Dynamics of the Zebrafish Segmentation Clock Core Circuit. PLoS Biology, 10(7):1-20.

Rajkumar, Arun S; Maerkl, Sebastian J (2012). Rapid Synthesis Of Defined Eukaryotic Promoter Libraries. ACS Synthetic Biology, 1:483-490.

Delgado-Gonzalo, Ricard; Chenouard, Nicolas; Unser, Michael (2012). Fast parametric snakes for 3D microscopy. In: IEEE International Symposium on Biomedical Imaging, Barcelona, Spain, 2 May 2012 - 5 May 2012.

Wang, Mingcong; Weiss, Manuel; Simonovic, Milan; Haertinger, Gabriele; Schrimpf, Sabine P; Hengartner, Michael O; von Mering, Christian (2012). PaxDb, a database of protein abundance averages across all three domains of life. Molecular & Cellular Proteomics, 11(8):492-500.

Snijder, Berend; Sacher, Raphael; Rämö, Pauli; Liberali, Prisca; Mench, Karin; Wolfrum, Nina; Burleigh, Laura; Scott, Cameron C; Verheije, Monique H; Mercer, Jason; Moese, Stefan; Heger, Thomas; Theusner, Kristina; Jurgeit, Andreas; Lamparter, David; Balistreri, Giuseppe; Schelhaas, Mario; De Haan, Cornelis A M; Marjomäki, Varpu; Hyypiä, Timo; Rottier, Peter J M; Sodeik, Beate; Marsh, Mark; Gruenberg, Jean; Amara, Ali; Greber, Urs; Helenius, Ari; Pelkmans, Lucas (2012). Single-cell analysis of population context advances RNAi screening at multiple levels. Molecular Systems Biology, 8(579):1-18.

Canella, Donatella; Bernasconi, David; Gilardi, Federica; LeMartelot, Gwendal; Migliavacca, Eugenia; Praz, Viviane; Cousin, Pascal; Delorenzi, Mauro; Hernandez, Nouria (2012). A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver. Genome Research, 22:666-680.

Schwank, G; Yang, S F; Restrepo, S; Basler, K (2012). Comment on "Dynamics of dpp signaling and proliferation control". Science, 335(6067):401.

Geertz, Marcel; Rockel, Sylvie; Maerkl, Sebastian J (2012). A high-throughput microfluidic method for generating and characterizing transcription factor mutant libraries. Methods in Molecular Biology, 813:107-123.

Mülleder, Michael; Capuano, Floriana; Pir, Pınar; Christen, Stefan; Sauer, Uwe; Oliver, Stephen G; Ralser, Markus (2012). A prototrophic deletion mutant collection for yeast metabolomics and systems biology. Nature Biotechnology, 30(12):1176-1178.

Reboux, Sylvain; Schrader, Birte; Sbalzarini, Ivo F (2012). A self-organizing Lagrangian particle method for adaptive-resolution advection–diffusion simulations. Journal of Computational Physics, 231(9):3623-3646.

Gonnet, Pedro; Dimopoulos, Sotiris; Widmer, Lukas; Stelling, Jörg (2012). A specialized ODE integrator for the efficient computation of parameter sensitivities. BMC Systems Biology, 6:46.

Koeppl, Heinz; Zechner, Christoph; Ganguly, Arnab; Pelet, Serge; Peter, Matthias (2012). Accounting for extrinsic variability in the estimation of stochastic rate constants. International Journal of Robust and Nonlinear Control, 22(10):1103-1119.

Pelet, Serge; Dechant, Reinhard; Lee, Sung Sik; van Drogen, Frank; Peter, Matthias (2012). An integrated image analysis platform to quantify signal transduction in single cells. Integrative Biology, 4:1274-82.

Radotić, Ksenija; Roduit, Charles; Simonović, Jasna; Hornitschek, Patricia; Fankhauser, Christian; Mutavdžić, Dragosav; Steinbach, Gabor; Dietler, Giovanni; Kasas, Sandor (2012). Atomic Force Microscopy Stiffness Tomography on Living Arabidopsis thaliana Cells Reveals the Mechanical Properties of Surface and Deep Cell-Wall Layers during Growth. Biophysical Journal, 103(3):386-394.

Routier-Kierzkowska, A -L; Weber, A; Kochova, P; Felekis, D; Nelson, B J; Kuhlemeier, C; Smith, R S (2012). Cellular Force Microscopy for in Vivo Measurements of Plant Tissue Mechanics. Plant Physiology, 158(4):1514-1522.

Ojosnegros, S; Delgado-Eckert, E; Beerenwinkel, N (2012). Competition-colonization trade-off promotes coexistence of low-virulence viral strains. Journal of the Royal Society Interface, 9(74):2244-2254.

Kemmerling, Simon; Ziegler, Jörg; Schweighauser, Gabriel; Arnold, Stefan A; Giss, Dominic; Müller, Shirley A; Ringler, Philippe; Goldie, Kenneth N; Goedecke, Nils; Hierlemann, Andreas; Stahlberg, Henning; Engel, Andreas; Braun, Thomas (2012). Connecting μ-fluidics to electron microscopy. Journal of Structural Biology, 177(1):128-134.

Sugihara, Kaori; Chami, Mohamed; Derényi, Imre; Vörös, János; Zambelli, Tomaso (2012). Directed self-assembly of lipid nanotubes from inverted hexagonal structures. ACS Nano, 6(8):6626-6632.

Cardinale, J; Paul, G; Sbalzarini, I F (2012). Discrete region competition for unknown numbers of connected regions. IEEE transactions on image processing : a publication of the IEEE Signal Processing Society, 21(8):3531-3545.

Ramaswamy, Rajesh; González-Segredo, Nélido; Sbalzarini, Ivo F; Grima, Ramon (2012). Discreteness-induced concentration inversion in mesoscopic chemical systems. Nature Communications, 3:779.

Hosta-Rigau, Leticia; Jensen, Bettina E B; Fjeldsø, Kit S; Postma, Almar; Li, Guoxin; Goldie, Kenneth N; Albericio, Fernando; Zelikin, Alexander N; Städler, Brigitte (2012). Drug Delivery: Surface-Adhered Composite Poly(Vinyl Alcohol) Physical Hydrogels: Polymersome-Aided Delivery of Therapeutic Small Molecules. Advanced Healthcare Materials, 1(6):791-5.

Delgado-Gonzalo, R; Thévenaz, P; Unser, M (2012). Exponential splines and minimal-support bases for curve representation. Computer Aided Geometric Design, 29(2):109-128.

Awile, Omar; Büyükkeçeci, Ferit; Reboux, Sylvain; Sbalzarini, Ivo F (2012). Fast neighbor lists for adaptive-resolution particle simulations. Computer Physics Communications, 183(5):1073-1081.

Ramdya, Pavan; Schaffter, Thomas; Floreano, Dario; Benton, Richard (2012). Fluorescence Behavioral Imaging (FBI) Tracks Identity in Heterogeneous Groups of Drosophila. PLoS ONE, 7(11):e48381.

Le Martelot, Gwendal; Canella, Donatella; Symul, Laura; Migliavacca, Eugenia; Gilardi, Federica; Liechti, Robin; Martin, Olivier; Harshman, Keith; Delorenzi, Mauro; Desvergne, Béatrice; Herr, Winship; Deplancke, Bart; Schibler, Ueli; Rougemont, Jacques; Guex, Nicolas; Hernandez, Nouria; Naef, Felix (2012). Genome-wide RNA polymerase II profiles and RNA accumulation reveal kinetics of transcription and associated epigenetic changes during diurnal cycles. PLoS Biology, 10(11):e1001442.

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This list was generated on Wed Jul 26 01:07:53 2017 CEST.