Publication: A partial-propensity variant of the composition-rejection stochastic simulation algorithm for chemical reaction networks.
A partial-propensity variant of the composition-rejection stochastic simulation algorithm for chemical reaction networks.
Date
Date
Date
Citations
Ramaswamy, R., & Sbalzarini, I. F. (2010). A partial-propensity variant of the composition-rejection stochastic simulation algorithm for chemical reaction networks. The Journal of Chemical Physics, 132(4), 044102. https://doi.org/10.1063/1.3297948
Abstract
Abstract
Abstract
We present the partial-propensity stochastic simulation algorithm with composition-rejection sampling (PSSA-CR). It is an exact formulation of the stochastic simulation algorithm (SSA) for well-stirred systems of coupled chemical reactions. The new formulation is a partial-propensity variant [R. Ramaswamy, N. Gonzalez-Segredo, and I. F. Sbalzarini, J. Chem. Phys. 130, 244104 (2009)] of the composition- rejection SSA [A. Slepoy, A. P. Thompson, and S. J. Plimpton, J. Chem. Phys. 128, 205101 (2008)]. The computational cost of this new f
Metrics
Downloads
Views
Additional indexing
Creators (Authors)
- Ramaswamy, Rajesh
- Sbalzarini, Ivo F
Journal/Series Title
Journal/Series Title
Journal/Series Title
Volume
Volume
Volume
Number
Number
Number
Page range/Item number
Page range/Item number
Page range/Item number
Item Type
Item Type
Item Type
In collections
Language
Language
Language
Publication date
Publication date
Publication date
Date available
Date available
Date available
Publisher
Publisher
Publisher
ISSN or e-ISSN
ISSN or e-ISSN
ISSN or e-ISSN
OA Status
OA Status
OA Status
Publisher DOI
Metrics
Downloads
Views
Citations
Ramaswamy, R., & Sbalzarini, I. F. (2010). A partial-propensity variant of the composition-rejection stochastic simulation algorithm for chemical reaction networks. The Journal of Chemical Physics, 132(4), 044102. https://doi.org/10.1063/1.3297948
