Publication: Quantitative sequence analysis of FBN1 premature termination codons provides evidence for incomplete NMD in leukocytes
Quantitative sequence analysis of FBN1 premature termination codons provides evidence for incomplete NMD in leukocytes
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Magyar, I., Colman, D., Arnold, E., Baumgartner, D., Bottani, A., Fokstuen, S., Addor, M. C., Berger, W., Carrel, T., Steinmann, B., & Mátyás, G. (2009). Quantitative sequence analysis of FBN1 premature termination codons provides evidence for incomplete NMD in leukocytes. Human Mutation, 30, 1355–1364. https://doi.org/10.1002/humu.21058
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We improved, evaluated, and used Sanger sequencing for quantification of single nucleotide polymorphism (SNP) variants in transcripts and gDNA samples. This improved assay resulted in highly reproducible relative allele frequencies (e.g., for a heterozygous gDNA 50.0+/-1.4%, and for a missense mutation-bearing transcript 46.9+/-3.7%) with a lower detection limit of 3-9%. It provided excellent accuracy and linear correlation between expected and observed relative allele frequencies. This sequencing assay, which can also be used for the
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Magyar, I., Colman, D., Arnold, E., Baumgartner, D., Bottani, A., Fokstuen, S., Addor, M. C., Berger, W., Carrel, T., Steinmann, B., & Mátyás, G. (2009). Quantitative sequence analysis of FBN1 premature termination codons provides evidence for incomplete NMD in leukocytes. Human Mutation, 30, 1355–1364. https://doi.org/10.1002/humu.21058