Publication: Unraveling virus-induced cellular signaling cascades by label-free quantitative phosphoproteomics
Unraveling virus-induced cellular signaling cascades by label-free quantitative phosphoproteomics
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Hunziker, A., & Stertz, S. (2022). Unraveling virus-induced cellular signaling cascades by label-free quantitative phosphoproteomics. STAR Protocols, 3(1), 101089. https://doi.org/10.1016/j.xpro.2021.101089
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Due to the low stoichiometry and highly transient nature of protein phosphorylation it is challenging to capture the dynamics and complexity of phosphorylation events on a systems level. Here, we present an optimized protocol to measure virus-induced phosphorylation events with high sensitivity using label free quantification-based phosphoproteomics. Specifically, we describe filter assisted protein digestion (FASP), enrichment of phosphopeptides, mass spectrometry, and subsequent bioinformatic analysis. For complete details on the us
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Hunziker, A., & Stertz, S. (2022). Unraveling virus-induced cellular signaling cascades by label-free quantitative phosphoproteomics. STAR Protocols, 3(1), 101089. https://doi.org/10.1016/j.xpro.2021.101089