Publication: Fiji: an open-source platform for biological-image analysis
Fiji: an open-source platform for biological-image analysis
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Schindelin, J., Arganda-Carreras, I., Frise, E., Kaynig, V., Longair, M., Pietzsch, T., Preibisch, S., Rueden, C., Saalfeld, S., Schmid, B., Tinevez, J.-Y., James White, D., Hartenstein, V., Eliceiri, K., Tomancak, P., & Cardona, A. (2012). Fiji: an open-source platform for biological-image analysis. Nature Methods, 9(7), 676–682. https://doi.org/10.1038/nmeth.2019
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Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software engineering practices to combine powerful software libraries with a broad range of scripting languages to enable rapid prototyping of image-processing algorithms. Fiji facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system. We propose Fiji as a platform for productive collaboration between computer science and biology resear
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- Schindelin, Johannes
- Arganda-Carreras, Ignacio
- Frise, Erwin
- Kaynig, Verena
- Longair, Mark
- Pietzsch, Tobias
- Preibisch, Stephan
- Rueden, Curtis
- Saalfeld, Stephan
- Schmid, Benjamin
- Tinevez, Jean-Yves
- James White, Daniel
- Hartenstein, Volker
- Eliceiri, Kevin
- Tomancak, Pavel
- Cardona, Albert
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Schindelin, J., Arganda-Carreras, I., Frise, E., Kaynig, V., Longair, M., Pietzsch, T., Preibisch, S., Rueden, C., Saalfeld, S., Schmid, B., Tinevez, J.-Y., James White, D., Hartenstein, V., Eliceiri, K., Tomancak, P., & Cardona, A. (2012). Fiji: an open-source platform for biological-image analysis. Nature Methods, 9(7), 676–682. https://doi.org/10.1038/nmeth.2019