Publication: CHIPS: an Extensible Toolbox for Cellular and Hemodynamic Two-Photon Image Analysis
CHIPS: an Extensible Toolbox for Cellular and Hemodynamic Two-Photon Image Analysis
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Barrett, M. J. P., Ferrari, K. D., Stobart, J. L., Holub, M., & Weber, B. (2018). CHIPS: an Extensible Toolbox for Cellular and Hemodynamic Two-Photon Image Analysis. Neuroinformatics, 16(1), 145–147. https://doi.org/10.1007/s12021-017-9344-y
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Two-photon microscopy is able to produce exquisite and informative functional images of cells and blood vessels in living animals or tissue,1 especially when combined with genetically-encoded indicators of cellular activity.2 Since these imaging techniques typically produce too much data to analyse manually, a number of automated or semi-automated image analysis approaches have been developed. However, even aside from the algorithms themselves, many factors can complicate analysis workflows.
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Barrett, M. J. P., Ferrari, K. D., Stobart, J. L., Holub, M., & Weber, B. (2018). CHIPS: an Extensible Toolbox for Cellular and Hemodynamic Two-Photon Image Analysis. Neuroinformatics, 16(1), 145–147. https://doi.org/10.1007/s12021-017-9344-y