Publication:

Image-based consensus molecular subtype classification (imCMS) of colorectal cancer using deep learning

Date

Date

Date
2019
Working Paper

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Sirinukunwattana, K., Domingo, E., Richman, S., et al, & Koelzer, V. H. (2019). Image-based consensus molecular subtype classification (imCMS) of colorectal cancer using deep learning (No. 645143; BioRxiv). https://doi.org/10.1101/645143

Abstract

Abstract

Abstract

Image analysis is a cost-effective tool to associate complex features of tissue organisation with molecular and outcome data. Here we predict consensus molecular subtypes (CMS) of colorectal cancer (CRC) from standard H&E sections using deep learning. Domain adversarial training of a neural classification network was performed using 1,553 tissue sections with comprehensive multi- omic data from three independent datasets. Image-based consensus molecular subtyping (imCMS) accurately classified CRC whole-slide images and preoperativ

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126 since deposited on 2019-09-18
122last week
Acq. date: 2025-11-14

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280 since deposited on 2019-09-18
279last week
Acq. date: 2025-11-14

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Series Name
bioRxiv

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Institution

Institution

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Item Type

Item Type
Working Paper

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Dewey Decimal Classifikation

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Language
English

Publication date

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Publication date
2019-05-23

Date available

Date available

Date available
2019-09-18

ISSN or e-ISSN

ISSN or e-ISSN

ISSN or e-ISSN
2164-7844

Additional Information

Additional Information

Additional Information
Now published in Gut: Sirinukunwattana K, Domingo E, Richman SD, et al: Image-based consensus molecular subtype (imCMS) classification of colorectal cancer using deep learning, Gut Published Online First: 20 July 2020. doi: 10.1136/gutjnl-2019-319866

OA Status

OA Status

OA Status
Green

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Downloads

126 since deposited on 2019-09-18
122last week
Acq. date: 2025-11-14

Views

280 since deposited on 2019-09-18
279last week
Acq. date: 2025-11-14

Citations

Citations

Citation copied

Sirinukunwattana, K., Domingo, E., Richman, S., et al, & Koelzer, V. H. (2019). Image-based consensus molecular subtype classification (imCMS) of colorectal cancer using deep learning (No. 645143; BioRxiv). https://doi.org/10.1101/645143

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