Publication:

Computer vision for image-based transcriptomics

Date

Date

Date
2015
Journal Article
Published version

Citations

Citation copied

Stoeger, T., Battich, N., Herrmann, M. D., Yakimovich, Y., & Pelkmans, L. (2015). Computer vision for image-based transcriptomics. Methods, 85, 44–53. https://doi.org/10.1016/j.ymeth.2015.05.016

Abstract

Abstract

Abstract

Single-cell transcriptomics has recently emerged as one of the most promising tools for understanding the diversity of the transcriptome among single cells. Image-based transcriptomics is unique compared to other methods as it does not require conversion of RNA to cDNA prior to signal amplification and transcript quantification. Thus, its efficiency in transcript detection is unmatched by other methods. In addition, image-based transcriptomics allows the study of the spatial organization of the transcriptome in single cells at single-

Additional indexing

Creators (Authors)

  • Stoeger, Thomas
    affiliation.icon.alt
  • Battich, Nico
    affiliation.icon.alt
  • Herrmann, Markus D
    affiliation.icon.alt
  • Yakimovich, Yauhen
    affiliation.icon.alt
  • Pelkmans, Lucas
    affiliation.icon.alt

Journal/Series Title

Journal/Series Title

Journal/Series Title

Volume

Volume

Volume
85

Page range/Item number

Page range/Item number

Page range/Item number
44

Page end

Page end

Page end
53

Item Type

Item Type

Item Type
Journal Article

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Keywords

Image-based transcriptomics, Single-molecule, Single-cell, Segmentation, Localization, Subcellular, High-throughput, FISH, In situ hybridization

Language

Language

Language
English

Publication date

Publication date

Publication date
2015-09-01

Date available

Date available

Date available
2015-12-15

Publisher

Publisher

Publisher

ISSN or e-ISSN

ISSN or e-ISSN

ISSN or e-ISSN
1046-2023

OA Status

OA Status

OA Status
Green

PubMed ID

PubMed ID

PubMed ID

Citations

Citation copied

Stoeger, T., Battich, N., Herrmann, M. D., Yakimovich, Y., & Pelkmans, L. (2015). Computer vision for image-based transcriptomics. Methods, 85, 44–53. https://doi.org/10.1016/j.ymeth.2015.05.016

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Files
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