Publication: EpiTools: An Open-Source Image Analysis Toolkit for Quantifying Epithelial Growth Dynamics
EpiTools: An Open-Source Image Analysis Toolkit for Quantifying Epithelial Growth Dynamics
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Heller, D., Hoppe, A., Restrepo, S., Gatti, L., Tournier, A. L., Tapon, N., Basler, K., & Mao, Y. (2016). EpiTools: An Open-Source Image Analysis Toolkit for Quantifying Epithelial Growth Dynamics. Developmental Cell, 36(1), 103–116. https://doi.org/10.1016/j.devcel.2015.12.012
Abstract
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Abstract
Epithelia grow and undergo extensive rearrangements to achieve their final size and shape. Imaging the dynamics of tissue growth and morphogenesis is now possible with advances in time-lapse microscopy, but a true understanding of their complexities is limited by automated image analysis tools to extract quantitative data. To overcome such limitations, we have designed a new open-source image analysis toolkit called EpiTools. It provides user-friendly graphical user interfaces for accurately segmenting and tracking the contours of cel
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Creators (Authors)
- Heller, Davide
- Hoppe, Andreas
- Restrepo, Simon
- Gatti, Lorenzo
- Tournier, Alexander L
- Tapon, Nicolas
- Mao, Yanlan
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Heller, D., Hoppe, A., Restrepo, S., Gatti, L., Tournier, A. L., Tapon, N., Basler, K., & Mao, Y. (2016). EpiTools: An Open-Source Image Analysis Toolkit for Quantifying Epithelial Growth Dynamics. Developmental Cell, 36(1), 103–116. https://doi.org/10.1016/j.devcel.2015.12.012
