Publication: Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources
Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources
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Rebholz-Schuhmann, D., Kafkas, S., Kim, J., Li, C., Yepes, A. J., Hoehndorf, R., Backofen, R., & Lewin, I. (2013). Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources. Journal of Biomedical Semantics, 4, 28. https://doi.org/10.1186/2041-1480-4-28
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Motivation The identification of protein and gene names (PGNs) from the scientific literature requires semantic resources: Terminological and lexical resources deliver the term candidates into PGN tagging solutions and the gold standard corpora (GSC) train them to identify term parameters and contextual features.Ideally all three resources, i.e.~corpora, lexica and taggers, cover the same domain knowledge, and thus support identification of the same types of PGNs and cover all of them.Unfortunately, none of the three serves as a predo
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- Rebholz-Schuhmann, Dietrich
- Kafkas, Senay
- Kim, Jee-hyub
- Li, Chen
- Yepes, Antonio Jimeno
- Hoehndorf, Robert
- Backofen, Rolf
- Lewin, Ian
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Rebholz-Schuhmann, D., Kafkas, S., Kim, J., Li, C., Yepes, A. J., Hoehndorf, R., Backofen, R., & Lewin, I. (2013). Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources. Journal of Biomedical Semantics, 4, 28. https://doi.org/10.1186/2041-1480-4-28
