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DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes

Date

Date

Date
2023
Working Paper

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Tiberi, S., Meili, J., Cai, P., Soneson, C., He, D., Sarkar, H., Avalos-Pacheco, A., Patro, R., & Robinson, M. D. (2023). DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes (No. 553679; BioRxiv). https://doi.org/10.1101/2023.08.17.553679

Abstract

Abstract

Abstract

MOTIVATION: Although transcriptomics data is typically used to analyse mature spliced mRNA, recent attention has focused on jointly investigating spliced and unspliced (or precursor-) mRNA, which can be used to study gene regulation and changes in gene expression production. Nonetheless, most methods for spliced/unspliced inference (such as RNA velocity tools) focus on individual samples, and rarely allow comparisons between groups of samples (e.g., healthy vs . diseased). Furthermore, this kind of inference is challenging, because sp

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Creators (Authors)

  • Tiberi, Simone
  • Meili, Joël
  • Cai, Peiying
  • Soneson, Charlotte
  • He, Dongze
  • Sarkar, Hirak
  • Avalos-Pacheco, Alejandra
  • Patro, Rob

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Series Name

Series Name
bioRxiv

Institution

Institution

Institution

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Item Type

Item Type
Working Paper

Dewey Decimal Classifikation

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Dewey Decimal Classifikation

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Language

Language
English

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Publication date

Publication date
2023-08-17

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Date available
2023-10-27

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ISSN or e-ISSN
2164-7844

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OA Status
Green

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PubMed ID: 37645841

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Tiberi, S., Meili, J., Cai, P., Soneson, C., He, D., Sarkar, H., Avalos-Pacheco, A., Patro, R., & Robinson, M. D. (2023). DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes (No. 553679; BioRxiv). https://doi.org/10.1101/2023.08.17.553679

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