Publication:
Dependency parsing for interaction detection in pharmacogenomics

Date

Date

Date
2012
Conference or Workshop Item
Published version
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cris.lastimport.scopus2025-07-20T03:33:14Z
cris.lastimport.wos2025-08-07T01:33:06Z
cris.virtual.orcidhttps://orcid.org/0000-0003-1365-0662
cris.virtualsource.orcid880e729a-aebc-4a05-959b-4610915f7763
dc.contributor.institutionUniversity of Zurich
dc.date.accessioned2012-05-04T08:28:39Z
dc.date.available2012-05-04T08:28:39Z
dc.date.issued2012-05-25
dc.description.abstractWe give an overview of our approach to the extraction of interactions between pharmacogenomic entities like drugs, genes and diseases and suggest classes of interaction types driven by data from PharmGKB and partly following the top level ontology WordNet and biomedical types from BioNLP. Our text mining approach to the extraction of interactions is based on syntactic analysis. We use syntactic analyses to explore domain events and to suggest a set of interaction labels for the pharmacogenomics domain.
dc.identifier.scopus2-s2.0-85037375260
dc.identifier.urihttps://www.zora.uzh.ch/handle/20.500.14742/71894
dc.identifier.wos000323927702024
dc.language.isoeng
dc.subjectPharmacogenomics
dc.subjectEvent Classes
dc.subjectInteraction Detection
dc.subject.ddc000 Computer science, knowledge & systems
dc.subject.ddc410 Linguistics
dc.titleDependency parsing for interaction detection in pharmacogenomics
dc.typeconference_item
dcterms.accessRightsinfo:eu-repo/semantics/openAccess
dcterms.bibliographicCitation.booktitleProceedings of LREC 2012: The eighth international conference on Language Resources and Evaluation
dcterms.bibliographicCitation.originalpublisherplaceIstanbul
dspace.entity.typePublicationen
oairecerif.event.endDate2012-05-25
oairecerif.event.placeIstanbul
oairecerif.event.startDate2012-05-21
uzh.contributor.affiliationUniversity of Zurich
uzh.contributor.affiliationUniversity of Zurich
uzh.contributor.affiliationUniversity of Zurich
uzh.contributor.authorSchneider, Gerold
uzh.contributor.authorRinaldi, Fabio
uzh.contributor.authorClematide, Simon
uzh.contributor.correspondenceYes
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.document.availabilitypublished_version
uzh.eprint.datestamp2012-05-04 08:28:39
uzh.eprint.lastmod2022-03-16 08:16:18
uzh.eprint.statusChange2012-05-04 08:28:39
uzh.event.presentationTypepaper
uzh.event.titleLREC 2012: The eighth international conference on Language Resources and Evaluation
uzh.event.typeconference
uzh.funder.nameSNSF
uzh.funder.projectTitleSwiss National Science Foundation (grant 100014-118396/1)
uzh.funder.projectTitleNovartis Pharma AG, NIBR-IT, Text Mining Services
uzh.harvester.ethYes
uzh.harvester.nbNo
uzh.identifier.doi10.5167/uzh-62069
uzh.oastatus.zoraGreen
uzh.publication.citationSchneider, Gerold; Rinaldi, Fabio; Clematide, Simon (2012). Dependency parsing for interaction detection in pharmacogenomics. In: LREC 2012: The eighth international conference on Language Resources and Evaluation, Istanbul, 21 May 2012 - 25 May 2012.
uzh.publication.originalworkoriginal
uzh.publication.publishedStatusfinal
uzh.scopus.impact0
uzh.scopus.subjectsLinguistics and Language
uzh.scopus.subjectsLanguage and Linguistics
uzh.scopus.subjectsEducation
uzh.scopus.subjectsLibrary and Information Sciences
uzh.workflow.eprintid62069
uzh.workflow.fulltextStatuspublic
uzh.workflow.revisions79
uzh.workflow.rightsCheckkeininfo
uzh.workflow.statusarchive
uzh.wos.impact0
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