Publication: iBRAIN2: Automated analysis and data handling for RNAi screens
iBRAIN2: Automated analysis and data handling for RNAi screens
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Rouilly, V., Pujadas, E., Hullár, B., Balázs, C., Kunszt, P., & Podvinec, M. (2012). iBRAIN2: Automated analysis and data handling for RNAi screens. In S. Gesing, T. Glatard, S. D. Olabarriaga, T. Solomonides, J. C. Silverstein, J. Montagnat, A. Gaignard, & D. Krefting (Eds.), HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences (No. 175; Vol. 175, Issue 175, pp. 205–213). I O S Press. https://doi.org/10.3233/978-1-61499-054-3-205
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We report on the implementation of a software suite dedicated to the management and analysis of large scale RNAi High Content Screening (HCS). We describe the requirements identified amongst our different users, the supported data flow, and the implemented software. Our system is already supporting productively three different laboratories operating in distinct IT infrastructures. The system was already used to analyze hundreds of RNAi HCS plates.
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- Rouilly, Vincent
- Pujadas, Eva
- Hullár, Béla
- Balázs, Csabas
- Kunszt, Peter
- Podvinec, Michael
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Rouilly, V., Pujadas, E., Hullár, B., Balázs, C., Kunszt, P., & Podvinec, M. (2012). iBRAIN2: Automated analysis and data handling for RNAi screens. In S. Gesing, T. Glatard, S. D. Olabarriaga, T. Solomonides, J. C. Silverstein, J. Montagnat, A. Gaignard, & D. Krefting (Eds.), HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences (No. 175; Vol. 175, Issue 175, pp. 205–213). I O S Press. https://doi.org/10.3233/978-1-61499-054-3-205
