Publication: Accelerated stochastic and hybrid methods for spatial simulations of reaction-diffusion systems
Accelerated stochastic and hybrid methods for spatial simulations of reaction-diffusion systems
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Rossinelli, D., Bayati, B., & Koumoutsakos, P. (2008). Accelerated stochastic and hybrid methods for spatial simulations of reaction-diffusion systems. Chemical Physics Letters, 451(1–3), 136–140. https://doi.org/10.1016/j.cplett.2007.11.055
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Spatial distributions characterize the evolution of reaction-diffusion models of several physical, chemical, and biological systems. We present two novel algorithms for the efficient simulation of these models: Spatial т-Leaping (Sт -Leaping), employing a unified acceleration of the stochastic simulation of reaction and diffusion, and Hybrid т-Leaping (Hт-Leaping), combining a deterministic diffusion approximation with a т-Leaping acceleration of the stochastic reactions. The algorithms are validated by solving Fisher’s equation and u
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- Rossinelli, D
- Bayati, B
- Koumoutsakos, P
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Rossinelli, D., Bayati, B., & Koumoutsakos, P. (2008). Accelerated stochastic and hybrid methods for spatial simulations of reaction-diffusion systems. Chemical Physics Letters, 451(1–3), 136–140. https://doi.org/10.1016/j.cplett.2007.11.055
