Publication:

A standardized nomenclature for the rods and cones of the vertebrate retina

Date

Date

Date
2025
Journal Article
Published version
cris.lastimport.scopus2025-06-03T03:44:37Z
cris.lastimport.wos2025-07-31T01:50:03Z
cris.virtual.orcidhttps://orcid.org/0000-0002-9615-480X
cris.virtualsource.orcid41422341-64ed-43aa-ac05-13ed2f1509f3
dc.contributor.institutionUniversity of Zurich
dc.date.accessioned2025-06-02T11:20:56Z
dc.date.available2025-06-02T11:20:56Z
dc.date.issued2025-05-07
dc.description.abstract

Vertebrate photoreceptors have been studied for well over a century, but a fixed nomenclature for referring to orthologous cell types across diverse species has been lacking. Instead, photoreceptors have been variably—and often confusingly—named according to morphology, presence/absence of ‘rhodopsin’, spectral sensitivity, chromophore usage, and/or the gene family of the opsin(s) they express. Here, we propose a unified nomenclature for vertebrate rods and cones that aligns with the naming systems of other retinal cell classes and that is based on the photoreceptor type’s putative evolutionary history. This classification is informed by the functional, anatomical, developmental, and molecular identities of the neuron as a whole, including the expression of deeply conserved transcription factors required for development. The proposed names will be applicable across all vertebrates and indicative of the widest possible range of properties, including their postsynaptic wiring, and hence will allude to their common and species-specific roles in vision. Furthermore, the naming system is open-ended to accommodate the future discovery of as-yet unknown photoreceptor types.

dc.identifier.doi10.1371/journal.pbio.3003157
dc.identifier.issn1544-9173
dc.identifier.scopus2-s2.0-105004759335
dc.identifier.urihttps://www.zora.uzh.ch/handle/20.500.14742/230610
dc.identifier.wos001485404500002
dc.language.isoeng
dc.subject.ddc570 Life sciences; biology
dc.title

A standardized nomenclature for the rods and cones of the vertebrate retina

dc.typearticle
dcterms.accessRightsinfo:eu-repo/semantics/openAccess
dcterms.bibliographicCitation.journaltitlePLoS Biology
dcterms.bibliographicCitation.number5
dcterms.bibliographicCitation.originalpublishernamePublic Library of Science (PLoS)
dcterms.bibliographicCitation.pagestarte3003157
dcterms.bibliographicCitation.pmid40333813
dcterms.bibliographicCitation.volume23
dspace.entity.typePublicationen
uzh.contributor.affiliationUniversity of Sussex
uzh.contributor.affiliationUniversity of Maryland
uzh.contributor.affiliationUniversity of Sussex
uzh.contributor.affiliationLa Trobe University
uzh.contributor.affiliationNational Eye Institute
uzh.contributor.affiliationUniversity of Queensland
uzh.contributor.affiliationUniversität Oldenburg
uzh.contributor.affiliationUniversitätsklinikum Tübingen Medizinische Fakultät
uzh.contributor.affiliationSimon Fraser University
uzh.contributor.affiliationUniversity of Sussex
uzh.contributor.affiliationCenter of Advanced European Studies and Research
uzh.contributor.affiliationLunds Universitet
uzh.contributor.affiliationUniversity of Zurich
uzh.contributor.affiliationNational Eye Institute
uzh.contributor.affiliationFaculty of Biology, Medicine and Health
uzh.contributor.affiliationUniversity of Sussex
uzh.contributor.affiliationUniversity of California, Berkeley
uzh.contributor.affiliationUniversity of California, Berkeley
uzh.contributor.affiliationWashington University School of Medicine in St. Louis
uzh.contributor.affiliationWashington University School of Medicine in St. Louis
uzh.contributor.authorBaden, Tom
uzh.contributor.authorAngueyra, Juan M
uzh.contributor.authorBosten, Jenny M
uzh.contributor.authorCollin, Shaun P
uzh.contributor.authorConway, Bevil R
uzh.contributor.authorCortesi, Fabio
uzh.contributor.authorDedek, Karin
uzh.contributor.authorEuler, Thomas
uzh.contributor.authorNovales Flamarique, Iñigo
uzh.contributor.authorFranklin, Anna
uzh.contributor.authorHaverkamp, Silke
uzh.contributor.authorKelber, Almut
uzh.contributor.authorNeuhauss, Stephan C F
uzh.contributor.authorLi, Wei
uzh.contributor.authorLucas, Robert J
uzh.contributor.authorOsorio, Daniel C
uzh.contributor.authorShekhar, Karthik
uzh.contributor.authorTommasini, Dario
uzh.contributor.authorYoshimatsu, Takeshi
uzh.contributor.authorCorbo, Joseph C
uzh.contributor.correspondenceYes
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.contributor.correspondenceNo
uzh.document.availabilitypublished_version
uzh.eprint.datestamp2025-06-02 11:20:56
uzh.eprint.lastmod2025-07-31 01:56:35
uzh.eprint.statusChange2025-06-02 11:20:56
uzh.harvester.ethYes
uzh.harvester.nbNo
uzh.identifier.doi10.5167/uzh-277579
uzh.jdb.eprintsId18222
uzh.oastatus.unpaywallgold
uzh.oastatus.zoraGold
uzh.publication.citationBaden, Tom; Angueyra, Juan M; Bosten, Jenny M; Collin, Shaun P; Conway, Bevil R; Cortesi, Fabio; Dedek, Karin; Euler, Thomas; Novales Flamarique, Iñigo; Franklin, Anna; Haverkamp, Silke; Kelber, Almut; Neuhauss, Stephan C F; Li, Wei; Lucas, Robert J; Osorio, Daniel C; Shekhar, Karthik; Tommasini, Dario; Yoshimatsu, Takeshi; Corbo, Joseph C (2025). A standardized nomenclature for the rods and cones of the vertebrate retina. PLoS Biology, 23(5):e3003157.
uzh.publication.freeAccessAtdoi
uzh.publication.originalworkfurther
uzh.publication.publishedStatusfinal
uzh.scopus.impact0
uzh.scopus.subjectsGeneral Neuroscience
uzh.scopus.subjectsGeneral Biochemistry, Genetics and Molecular Biology
uzh.scopus.subjectsGeneral Immunology and Microbiology
uzh.scopus.subjectsGeneral Agricultural and Biological Sciences
uzh.workflow.doajuzh.workflow.doaj.true
uzh.workflow.eprintid277579
uzh.workflow.fulltextStatuspublic
uzh.workflow.revisions23
uzh.workflow.rightsCheckkeininfo
uzh.workflow.sourceCrossref:10.1371/journal.pbio.3003157
uzh.workflow.statusarchive
uzh.wos.impact1
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