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Long-Range conformational transition of a photoswitchable allosteric protein: Molecular dynamics simulation study

Date

Date

Date
2014
Journal Article
Published version

Citations

Citation copied

Buchenberg, S., Knecht, V., Walser, R., Hamm, P., & Stock, G. (2014). Long-Range conformational transition of a photoswitchable allosteric protein: Molecular dynamics simulation study. Journal of Physical Chemistry B, 118, 13468–13476. https://doi.org/10.1021/jp506873y

Abstract

Abstract

Abstract

A local perturbation of a protein may lead to functional changes at some distal site. An example is the PDZ2 domain of human tyrosine phosphatase 1E which shows an allosteric transition upon binding to a peptide ligand. Recently Buchli et al. presented a time-resolved study of this transition by covalently linking an azobenzene photoswitch across the binding groove and using a femtosecond laser pulse that triggers the cis-trans photoisomerization of azobenzene. To aid the interpretation of these experiments, in this work seven microse

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205 since deposited on 2015-02-19
Acq. date: 2025-11-13

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174 since deposited on 2015-02-19
Acq. date: 2025-11-13

Additional indexing

Creators (Authors)

  • Buchenberg, Sebastian
    affiliation.icon.alt
  • Knecht, Volker
    affiliation.icon.alt
  • Walser, Reto
    affiliation.icon.alt
  • Stock, Gerhard
    affiliation.icon.alt

Journal/Series Title

Journal/Series Title

Journal/Series Title

Volume

Volume

Volume
118

Number

Number

Number
47

Page range/Item number

Page range/Item number

Page range/Item number
13468

Page end

Page end

Page end
13476

Item Type

Item Type

Item Type
Journal Article

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Language

Language

Language
English

Publication date

Publication date

Publication date
2014-11-27

Date available

Date available

Date available
2015-02-19

Publisher

Publisher

Publisher

ISSN or e-ISSN

ISSN or e-ISSN

ISSN or e-ISSN
1520-5207

Additional Information

Additional Information

Additional Information
This document is the Accepted Manuscript version of a Published Work that appeared in final form in [J. Phys. Chem. B], copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see [http://pubs.acs.org/doi/abs/10.1021/jp506873y].

OA Status

OA Status

OA Status
Green

PubMed ID

PubMed ID

PubMed ID

Metrics

Downloads

205 since deposited on 2015-02-19
Acq. date: 2025-11-13

Views

174 since deposited on 2015-02-19
Acq. date: 2025-11-13

Citations

Citation copied

Buchenberg, S., Knecht, V., Walser, R., Hamm, P., & Stock, G. (2014). Long-Range conformational transition of a photoswitchable allosteric protein: Molecular dynamics simulation study. Journal of Physical Chemistry B, 118, 13468–13476. https://doi.org/10.1021/jp506873y

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