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Degradation of protein translation machinery by amino acid starvation-induced macroautophagy


Gretzmeier, Christine; Eiselein, Sven; Johnson, Gregory R; Engelke, Rudolf; Nowag, Heike; Zarei, Mostafa; Küttner, Victoria; Becker, Andrea C; Rigbolt, Kristoffer T G; Høyer-Hansen, Maria; Andersen, Jens S; Münz, Christian; Murphy, Robert F; Dengjel, Jörn (2017). Degradation of protein translation machinery by amino acid starvation-induced macroautophagy. Autophagy, 13(6):1064-1075.

Abstract

Macroautophagy is regarded as a nonspecific bulk degradation process of cytoplasmic material within the lysosome. However, the process has mainly been studied by nonspecific bulk degradation assays using radiolabeling. In the present study we monitor protein turnover and degradation by global, unbiased approaches relying on quantitative mass spectrometry-based proteomics. Macroautophagy is induced by rapamycin treatment, and by amino acid and glucose starvation in differentially, metabolically labeled cells. Protein dynamics are linked to image-based models of autophagosome turnover. Depending on the inducing stimulus, protein as well as organelle turnover differ. Amino acid starvation-induced macroautophagy leads to selective degradation of proteins important for protein translation. Thus, protein dynamics reflect cellular conditions in the respective treatment indicating stimulus-specific pathways in stress-induced macroautophagy.

Abstract

Macroautophagy is regarded as a nonspecific bulk degradation process of cytoplasmic material within the lysosome. However, the process has mainly been studied by nonspecific bulk degradation assays using radiolabeling. In the present study we monitor protein turnover and degradation by global, unbiased approaches relying on quantitative mass spectrometry-based proteomics. Macroautophagy is induced by rapamycin treatment, and by amino acid and glucose starvation in differentially, metabolically labeled cells. Protein dynamics are linked to image-based models of autophagosome turnover. Depending on the inducing stimulus, protein as well as organelle turnover differ. Amino acid starvation-induced macroautophagy leads to selective degradation of proteins important for protein translation. Thus, protein dynamics reflect cellular conditions in the respective treatment indicating stimulus-specific pathways in stress-induced macroautophagy.

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Additional indexing

Item Type:Journal Article, refereed, original work
Communities & Collections:04 Faculty of Medicine > Institute of Experimental Immunology
Dewey Decimal Classification:570 Life sciences; biology
610 Medicine & health
Language:English
Date:3 June 2017
Deposited On:22 Feb 2018 16:25
Last Modified:14 Mar 2018 17:45
Publisher:Taylor & Francis
ISSN:1554-8627
OA Status:Green
Free access at:PubMed ID. An embargo period may apply.
Publisher DOI:https://doi.org/10.1080/15548627.2016.1274485
PubMed ID:28453381

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