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Draft genome sequences of five Shiga toxin-producing Escherichia coli isolates harboring the new recently described Subtilase cytotoxin allelic variant subAB2-3


Tasara, Taurai; Fierz, Lisa; Klumpp, Jochen; Schmidt, Herbert; Stephan, Roger (2017). Draft genome sequences of five Shiga toxin-producing Escherichia coli isolates harboring the new recently described Subtilase cytotoxin allelic variant subAB2-3. Genome Announcements, 5(8):e01582-16.

Abstract

We present here the draft genome sequences of five Shiga toxin-producing Escherichia coli (STEC) strains which tested positive in a primary subAB screening. Assembly and annotation of the draft genomes revealed that all strains harbored the recently described allelic variant subAB2-3 Based on the sequence data, primers were designed to identify and differentiate this variant.

Abstract

We present here the draft genome sequences of five Shiga toxin-producing Escherichia coli (STEC) strains which tested positive in a primary subAB screening. Assembly and annotation of the draft genomes revealed that all strains harbored the recently described allelic variant subAB2-3 Based on the sequence data, primers were designed to identify and differentiate this variant.

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Additional indexing

Item Type:Journal Article, refereed, original work
Communities & Collections:05 Vetsuisse Faculty > Institute of Food Safety and Hygiene
Dewey Decimal Classification:570 Life sciences; biology
610 Medicine & health
Language:English
Date:2017
Deposited On:14 Feb 2018 18:51
Last Modified:04 Jul 2018 13:42
Publisher:American Society for Microbiology
ISSN:2169-8287
OA Status:Hybrid
Free access at:PubMed ID. An embargo period may apply.
Publisher DOI:https://doi.org/10.1128/genomeA.01582-16
PubMed ID:28232433

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