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Selecting mRNA markers in blood for age estimation of the donor of a biological stain

Dørum, Guro; Hänggi, Nadescha Viviane; Burri, Dario; Marti, Yael; Banemann, Regine; Kulstein, Galina; Courts, Cornelius; Gosch, Annica; Hadrys, Thorsten; Haas, Cordula; Neubauer, Jacqueline (2024). Selecting mRNA markers in blood for age estimation of the donor of a biological stain. Forensic Science International. Genetics, 68:102976.

Abstract

RNA has gained a substantial amount of attention within the forensic field over the last decade. There is evidence that RNAs are differentially expressed with biological age. Since RNA can be co-extracted with DNA from the same piece of evidence, RNA-based analysis appears as a promising molecular alternative for predicting the biological age and hence inferring the chronological age of a person. Using RNA-Seq data we searched for markers in blood potentially associated with age. We used our own RNA-Seq data from dried blood stains as well as publicly available RNA-Seq data from whole blood, and compared two different approaches to select candidate markers. The first approach focused on individual gene analysis with DESeq2 to select the genes most correlated with age, while the second approach employed lasso regression to select a set of genes for optimal prediction of age. We present two lists with 270 candidate markers, one for each approach.

Additional indexing

Item Type:Journal Article, refereed, original work
Communities & Collections:04 Faculty of Medicine > Institute of Legal Medicine
Dewey Decimal Classification:340 Law
610 Medicine & health
Scopus Subject Areas:Health Sciences > Pathology and Forensic Medicine
Life Sciences > Genetics
Uncontrolled Keywords:Genetics, Pathology and Forensic Medicine Forensic Science, Forensic DNA Phenotyping, Age prediction, mRNA, RNA sequencing (RNA-Seq)
Language:English
Date:January 2024
Deposited On:27 Dec 2023 09:17
Last Modified:28 Apr 2025 01:37
Publisher:Elsevier
ISSN:1872-4973
OA Status:Hybrid
Free access at:Publisher DOI. An embargo period may apply.
Publisher DOI:https://doi.org/10.1016/j.fsigen.2023.102976
PubMed ID:38000161
Project Information:
  • Funder: European Union Internal Security Fund
  • Grant ID: IZ25-5793–2019-44
  • Project Title: “RNAgE” study
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  • Content: Published Version
  • Language: English
  • Licence: Creative Commons: Attribution 4.0 International (CC BY 4.0)

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