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Land conversion to agriculture induces taxonomic homogenization of soil microbial communities globally

Peng, Ziheng; Qian, Xun; Liu, Yu; Li, Xiaomeng; Gao, Hang; An, Yining; Qi, Jiejun; Jiang, Lan; Zhang, Yiran; Chen, Shi; Pan, Haibo; Chen, Beibei; Liang, Chunling; van der Heijden, Marcel G A; Wei, Gehong; Jiao, Shuo (2024). Land conversion to agriculture induces taxonomic homogenization of soil microbial communities globally. Nature Communications, 15(1):3624.

Abstract

Agriculture contributes to a decline in local species diversity and to above- and below-ground biotic homogenization. Here, we conduct a continental survey using 1185 soil samples and compare microbial communities from natural ecosystems (forest, grassland, and wetland) with converted agricultural land. We combine our continental survey results with a global meta-analysis of available sequencing data that cover more than 2400 samples across six continents. Our combined results demonstrate that land conversion to agricultural land results in taxonomic and functional homogenization of soil bacteria, mainly driven by the increase in the geographic ranges of taxa in croplands. We find that 20% of phylotypes are decreased and 23% are increased by land conversion, with croplands enriched inChloroflexi, Gemmatimonadota, Planctomycetota, Myxcoccota and Latescibacterota. Although there is no significant difference in functional composition between natural ecosystems and agricultural land, functional genes involved in nitrogen fixation, phosphorus mineralization and transportation are depleted in cropland. Our results provide a global insight into the consequences of land-use change on soil microbial taxonomic and functional diversity.

Additional indexing

Item Type:Journal Article, refereed, original work
Communities & Collections:07 Faculty of Science > Department of Plant and Microbial Biology
Dewey Decimal Classification:580 Plants (Botany)
Scopus Subject Areas:Physical Sciences > General Chemistry
Life Sciences > General Biochemistry, Genetics and Molecular Biology
Physical Sciences > General Physics and Astronomy
Language:English
Date:29 April 2024
Deposited On:07 Feb 2025 10:02
Last Modified:08 Feb 2025 21:01
Publisher:Nature Publishing Group
ISSN:2041-1723
OA Status:Gold
Free access at:Publisher DOI. An embargo period may apply.
Publisher DOI:https://doi.org/10.1038/s41467-024-47348-8
PubMed ID:38684659
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  • Content: Published Version
  • Language: English
  • Licence: Creative Commons: Attribution 4.0 International (CC BY 4.0)

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