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Number of items: 23.

Wiedl, T; Arni, S; Roschitzki, B; Grossmann, J; Collaud, S; Soltermann, A; Hillinger, S; Aebersold, R; Weder, W (2011). Activity-based proteomics: identification of ABHD11 and ESD activities as potential biomarkers for human lung adenocarcinoma. Journal of Proteomics, 74(10):1884-1894.

Reiland, S; Finazzi, G; Endler, A; Willig, A; Baerenfaller, K; Grossmann, J; Gerrits, B; Rutishauser, D; Gruissem, W; Rochaix, J D; Baginsky, S (2011). Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF). Proceedings of the National Academy of Sciences of the United States of America (PNAS), 108(31):12955-12960.

Kaempfer, T; Duerst, E; Gehrig, P; Roschitzki, B; Rutishauser, D; Grossmann, J; Schoedon, G; Vallelian, F; Schaer, D J (2011). Extracellular hemoglobin polarizes the macrophage proteome toward Hb-clearance, enhanced antioxidant capacity and suppressed HLA class 2 expression. Journal of Proteome Research, 10(5):2397-2408.

Reiland, S; Grossmann, J; Baerenfaller, K; Gehrig, P; Nunes-Nesi, A; Fernie, A R; Gruissem, W; Baginsky, S (2011). Integrated proteome and metabolite analysis of the de-etiolation process in plastids from rice (Oryza sativa L.). Proteomics, 11(9):1751-1763.

Owiti, J; Grossmann, J; Gehrig, P; Dessimoz, C; Laloi, C; Hansen, M B; Gruissem, W; Vanderschuren, H (2011). iTRAQ-based analysis of changes in the cassava root proteome reveals pathways associated with post-harvest physiological deterioration. The Plant Journal, 67(1):145-156.

Carranza, P; Grunau, A; Schneider, T; Hartmann, I; Lehner, A; Stephan, R; Gehrig, P; Grossmann, J; Groebel, K; Hoelzle, L E; Eberl, L; Riedel, K (2010). A gel-free quantitative proteomics approach to investigate temperature adaptation of the food-borne pathogen Cronobacter turicensis 3032. Proteomics, 10(18):3248-3261.

Grossmann, J; Roschitzki, B; Panse, C; Fortes, C; Barkow-Oesterreicher, S; Rutishauser, D; Schlapbach, R (2010). Implementation and evaluation of relative and absolute quantification in shotgun proteomics with label-free methods. Journal of Proteomics, 73(9):1740-1746.

Baumgärtel, K; Tweedie-Cullen, R Y; Grossmann, J; Gehrig, P; Livingstone-Zatchej, M; Mansuy, I M (2009). Changes in the proteome after neuronal Zif268 overexpression. Journal of Proteome Research, 8(7):3298-3316.

Reiland, S; Messerli, G; Baerenfaller, K; Gerrits, B; Endler, A; Grossmann, J; Gruissem, W; Baginsky, S (2009). Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks. Plant Physiology, 150(2):889-903.

Carranza, P; Hartmann, I; Lehner, A; Stephan, R; Gehrig, P; Grossmann, J; Barkow-Oesterreicher, S; Roschitzki, B; Eberl, L; Riedel, K (2009). Proteomic profiling of Cronobacter turicensis 3032, a food-borne opportunistic pathogen. Proteomics, 9(13):3564-3579.

Al-Batran, S E; Hartmann, J T; Probst, S; Schmalenberg, H; Hollerbach, S; Hofheinz, R; Rethwisch, V; Seipelt, G; Homann, N; Wilhelm, G; Schuch, G; Stoehlmacher, J; Derigs, H G; Hegewisch-Becker, S; Grossmann, J; Pauligk, C; Atmaca, A; Bokemeyer, C; Knuth, A; Jäger, E (2008). Phase III trial in metastatic gastroesophageal adenocarcinoma with fluorouracil, leucovorin plus either oxaliplatin or cisplatin: a study of the Arbeitsgemeinschaft Internistische Onkologie. Journal of Clinical Oncology, 26(9):1435-1442.

Kunzendorf, U; Krämer, B K; Arns, W; Braun, J; Grossmann, J; Pietruck, F; Schmidt-Gayk, H; Schwarz, A; Ziegler, E; Sperschneider, H; Wüthrich, R P; Nonnast-Daniel, B; Schindler, R; Renders, L (2008). Bone disease after renal transplantation. Nephrology, Dialysis, Transplantation, 23(2):450-458.

Eng, J K; Fischer, B; Grossmann, J; Maccoss, M J (2008). A fast SEQUEST cross correlation algorithm. Journal of Proteome Research, 7(10):4598-4602.

Baerenfaller, K; Grossmann, J; Grobei, M A; Hull, R; Hirsch-Hoffmann, M; Yalovsky, S; Zimmermann, P; Grossniklaus, U; Gruissem, W; Baginsky, S (2008). Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics. Science, 320(5878):938-941.

Baginsky, S; Grossmann, J; Gruissem, W (2007). Proteome analysis of chloroplast mRNA processing and degradation. Journal of Proteome Research, 6(2):809-820.

Mayer, D; Molawi, K; Martínez-Sobrido, L; Ghanem, A; Thomas, S; Baginsky, S; Grossmann, J; García-Sastre, A; Schwemmle, M (2007). Identification of cellular interaction partners of the influenza virus ribonucleoprotein complex and polymerase complex using proteomic-based approaches. Journal of Proteome Research, 6(2):672-682.

Grossmann, J; Fischer, B; Baerenfaller, K; Owiti, J; Buhmann, J M; Gruissem, W; Baginsky, S (2007). A workflow to increase the detection rate of proteins from unsequenced organisms in high-throughput proteomics experiments. Proteomics, 7(23):4245-4254.

Roos, F F; Jacob, R; Grossmann, J; Fischer, B; Buhmann, J M; Gruissem, W; Baginsky, S; Widmayer, P (2007). PepSplice: cache-efficient search algorithms for comprehensive identification of tandem mass spectra. Bioinformatics, 23(22):3016-3023.

Siddique, M A; Grossmann, J; Gruissem, W; Baginsky, S (2006). Proteome analysis of bell pepper (Capsicum annuum L.) chromoplasts. Plant & Cell Physiology, 47(12):1663-1673.

Fischer, B; Grossmann, J; Roth, V; Gruissem, W; Baginsky, S; Buhmann, J M (2006). Semi-supervised LC/MS alignment for differential proteomics. Bioinformatics, 22(14):e132-40.

Nesvizhskii, A I; Roos, F F; Grossmann, J; Vogelzang, M; Eddes, J S; Gruissem, W; Baginsky, S; Aebersold, R (2006). Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides. Molecular and Cellular Proteomics, 5(4):652-670.

Grossmann, J; Roos, F F; Cieliebak, M; Lipták, Z; Mathis, L K; Müller, M; Gruissem, W; Baginsky, S (2005). AUDENS: a tool for automated peptide de novo sequencing. Journal of Proteome Research, 4(5):1768-1774.

Fischer, B; Roth, V; Roos, F; Grossmann, J; Baginsky, S; Widmayer, P; Gruissem, W; Buhmann, J M (2005). NovoHMM: a hidden Markov model for de novo peptide sequencing. Analytical Chemistry, 77(22):7265-7273.

This list was generated on Tue Sep 25 06:54:08 2018 CEST.