Header

UZH-Logo

Maintenance Infos

Browse by Creators

Navigate back| Up a level
Export as
Number of items: 40.

Valko, Philipp O; Roschitzki, Bernd; Faigle, Wolfgang; Grossmann, Jonas; Panse, Christian; Biro, Peter; Dambach, Micha; Spahn, Donat R; Weller, Michael; Martin, Roland; Baumann, Christian R (2019). In search of cerebrospinal fluid biomarkers of fatigue in multiple sclerosis: A proteomics study. Journal of Sleep Research, 28(3):e12721.

Miller, Blake; Selevsek, Nathalie; Grossmann, Jonas; Kilminster, Tanya; Scanlon, Tim; Daniels, Matthew; Nanni, Paolo; Milton, John; Oldham, Chris; Greeff, Johan; Chapwanya, Aspinas; Bergfelt, Don; de Almeida, André M (2019). Ovine liver proteome: Assessing mechanisms of seasonal weight loss tolerance between Merino and Damara sheep. Journal of Proteomics, 191:180-190.

Jeong, Choongwon; Wilkin, Shevan; Amgalantugs, Tsend; Bouwman, Abigail S; Taylor, Willioam T T; Hagan, Richard W; Bromage, Sabri; Tsolmon, Soninkhishig; Trachsel, Christian; Grossmann, Jonas; Littleton, Judith; Makarewicz, Cheryl A; Krigbaum, John; Burri, Marta; Scott, Ashley; Davaasambuu, Ganmaa; Wright, Joshua; Irmer, Franziska; Myagmar, Erdene; Boivin, Nicole; Robbeets, Martine; Rühli, Frank J; Krause, Johannes; Frohlich, Bruno; Hendy, Jessica; Warinner, Christina (2018). Bronze Age population dynamics and the rise of dairy pastoralism on the eastern Eurasian steppe. Proceedings of the National Academy of Sciences of the United States of America, 115(48):E11248-E11255.

Roth, Ronelle; Chiapello, Marco; Montero, Héctor; Gehrig, Peter; Grossmann, Jonas; O'Holleran, Kevin; Hartken, Denise; Walters, Fergus; Yang, Shu-Yi; Hillmer, Stefan; Schumacher, Karin; Bowden, Sarah; Craze, Melanie; Wallington, Emma J; Miyao, Akio; Sawers, Ruairidh; Martinoia, Enrico; Paszkowski, Uta (2018). A rice Serine/Threonine receptor-like kinase regulates arbuscular mycorrhizal symbiosis at the peri-arbuscular membrane. Nature Communications, 9:4677.

Devaud, Yannick R; Avilla-Royo, Eva; Trachsel, Christian; Grossmann, Jonas; Martin, Ivan; Lutolf, Matthias P; Ehrbar, Martin (2018). Label-Free Quantification Proteomics for the Identification of Mesenchymal Stromal Cell Matrisome Inside 3D Poly(Ethylene Glycol) Hydrogels. Advanced Healthcare Materials, 7(21):1800534.

Yángüez, Emilio; Hunziker, Annika; Dobay, Maria Pamela; Yildiz, Soner; Schading, Simon; Elshina, Elizaveta; Karakus, Umut; Gehrig, Peter; Grossmann, Jonas; Dijkman, Ronald; Schmolke, Mirco; Stertz, Silke (2018). Phosphoproteomic-based kinase profiling early in influenza virus infection identifies GRK2 as antiviral drug target. Nature Communications, 9:3679.

Bostanci, Nagihan; Bao, Kai; Li, Xiaofei; Maekawa, Tomoki; Grossmann, Jonas; Panse, Christian; Briones, Ruel A; Resuello, Ranillo R G; Tuplano, Joel V; Garcia, Cristina A G; Reis, Edimara S; Lambris, John D; Hajishengallis, George (2018). Gingival Exudatome Dynamics Implicate Inhibition of the Alternative Complement Pathway in the Protective Action of the C3 Inhibitor Cp40 in Nonhuman Primate Periodontitis. Journal of Proteome Research, 17(9):3153-3175.

Schori, Christian; Trachsel, Christian; Grossmann, Jonas; Zygoula, Ioanna; Barthelmes, Daniel; Grimm, Christian (2018). The Proteomic Landscape in the Vitreous of Patients With Age-Related and Diabetic Retinal Disease. Investigative Ophthalmology & Visual Science [IOVS], 59(4):AMD31-AMD40.

Bao, Kai; Bostanci, Nagihan; Thurnheer, Thomas; Grossmann, Jonas; Wolski, Witold E; Thay, Bernard; Belibasakis, Georgios N; Oscarsson, Jan (2018). Aggregatibacter actinomycetemcomitans H-NS promotes biofilm formation and alters protein dynamics of other species within a polymicrobial oral biofilm. npj Biofilms and Microbiomes, 4:12.

Trachsel, Christian; Panse, Christian; Kockmann, Tobias; Wolski, Witold Eryk; Grossmann, Jonas; Schlapbach, Ralph (2018). rawDiag - an R package supporting rational LC-MS method optimization for bottom-up proteomics. bioRxiv 304485, University of Zurich.

Dev Singh, Kapil; Milstein, Stuart; Zheng, Xue; Keller, Martin; Grossmann, Jonas; Roschitzki, Bernd; Hengartner, Michael O (2017). Differential regulation of germ line apoptosis and germ cell differentiation by CPEB family members in C. elegans. PLoS ONE, 12(7):e0182270.

Casanova, Ruben; Xia, Daniel; Rulle, Undīne; Nanni, Paolo; Grossmann, Jonas; Vrugt, Bart; Wettstein, Reto; Ballester, Rafael; Astolfo, Alberto; Weder, Walter; Moch, Holger; Stampanoni, Marco; Beck, Andrew H; Soltermann, Alex (2017). Morphoproteomic characterization of lung squamous cell carcinoma fragmentation, a histological marker of increased tumor invasiveness. Cancer Research, 77(10):2585-2593.

Grossmann, Jonas; Fernández, Helena; Chaubey, Pururawa M; Valdés, Ana E; Gagliardini, Valeria; Cañal, María J; Russo, Giancarlo; Grossniklaus, Ueli (2017). Proteogenomic analysis greatly expands the identification of proteins related to reproduction in the apogamous fern dryopteris affinis ssp. affinis. Frontiers in Plant Science, 8:336.

Almeida, André M; Nanni, Paolo; Ferreira, Ana M; Fortes, Claudia; Grossmann, Jonas; Bessa, Rui J B; Costa, Paulo (2017). The longissimus thoracis muscle proteome in Alentejana bulls as affected by growth path. Journal of Proteomics, 152:206-215.

Uzozie, Anuli Christiana; Selevsek, Nathalie; Wahlander, Asa; Nanni, Paolo; Grossmann, Jonas; Weber, Achim; Buffoli, Federico; Marra, Giancarlo (2017). Targeted proteomics for multiplexed verification of markers of colorectal tumorigenesis. Molecular & Cellular Proteomics:1-48.

Klobučar, Marko; Sedić, Mirela; Gehrig, Peter; Grossmann, Jonas; Bilić, Mario; Kovač-Bilić, Lana; Pavelić, Krešimir; Kraljević Pavelić, Sandra (2016). Basement membrane protein ladinin-1 and the MIF-CD44-β1 integrin signaling axis are implicated in laryngeal cancer metastasis. BBA - Biochimica et Biophysica Acta, 1862(10):1938-1954.

Gapp, Katharina; Bohacek, Johannes; Grossmann, Jonas; Brunner, Andrea M; Manuella, Francesca; Nanni, Paolo; Mansuy, Isabelle M (2016). Potential of environmental enrichment to prevent transgenerational effects of paternal trauma. Neuropsychopharmacology, 41(11):2749-2758.

Pfrunder, Stefanie; Grossmann, Jonas; Hunziker, Peter; Brunisholz, René; Gekenidis, Maria-Theresia; Drissner, David (2016). Bacillus cereus Group-Type Strain-Specific Diagnostic Peptides. Journal of Proteome Research, 15(9):3098-107.

Hernández-Castellano, Lorenzo E; Ferreira, Ana M; Nanni, Paolo; Grossmann, Jonas; Argüello, Anastasio; Capote, Juan; Cai, Guohong; Lippolis, John; Castro, Noemí; de Almeida, Andre M (2016). The goat (Capra hircus) mammary gland secretory tissue proteome as influenced by weight loss: A study using label free proteomics. Journal of Proteomics, 145:60-69.

Fascellaro, Giuseppina; Petrera, Agnese; Lai, Zon Weng; Nanni, Paolo; Grossmann, Jonas; Burger, Sibylle; Biniossek, Martin L; Gomez-Auli, Alejandro; Schilling, Oliver; Imkamp, Frank (2016). Comprehensive proteomic analysis of nitrogen-starved mycobacterium smegmatis δpup reveals the impact of pupylation on nitrogen stress response. Journal of Proteome Research, 15(8):2812-2825.

Kockmann, Tobias; Trachsel, Christian; Panse, Christian; Wahlander, Asa; Selevsek, Nathalie; Grossmann, Jonas; Wolski, Witold E; Schlapbach, Ralph (2016). Targeted proteomics coming of age - SRM, PRM and DIA performance evaluated from a core facility perspective. Proteomics, 16(15-16):2183-2192.

Oktay, Yavuz; Ülgen, Ege; Can, Özge; Akyerli, Cemaliye B; Yüksel, Şirin; Erdemgil, Yiğit; Durası, I Melis; Henegariu, Octavian Ioan; Nanni, E Paolo; Selevsek, Nathalie; Grossmann, Jonas; Erson-Omay, E Zeynep; Bai, Hanwen; Gupta, Manu; Lee, William; Turcan, Şevin; Özpınar, Aysel; Huse, Jason T; Sav, M Aydın; Flanagan, Adrienne; Günel, Murat; Sezerman, O Uğur; Yakıcıer, M Cengiz; Pamir, M Necmettin; Özduman, Koray (2016). IDH-mutant glioma specific association of rs55705857 located at 8q24.21 involves MYC deregulation. Scientific Reports, 6:27569.

Kamkina, Polina; Snoek, L Basten; Grossmann, Jonas; Volkers, Rita J M; Sterken, Mark G; Daube, Michael; Roschitzki, Bernd; Fortes, Claudia; Schlapbach, Ralph; Roth, Alexander; von Mering, Christian; Hengartner, Michael O; Schrimpf, Sabine P; Kammenga, Jan E (2016). Natural genetic variation differentially affects the proteome and transcriptome in Caenorhabditis elegans. Molecular & Cellular Proteomics, 15(5):1670-1680.

Singh, Kapil Dev; Roschitzki, Bernd; Snoek, L. Basten; Grossmann, Jonas; Zheng, Xue; Elvin, Mark; Kamkina, Polina; Schrimpf, Sabine P; Poulin, Gino B; Kammenga, Jan E; Hengartner, Michael O (2016). Natural genetic variation influences protein abundances in C. elegans developmental signalling pathways. PLoS ONE, 11(3):e0149418.

Milleret, Vincent; Buzzi, Stefano; Gehrig, Peter; Ziogas, Algirdas; Grossmann, Jonas; Schilcher, Katrin; Zinkernagel, Annelies S; Zucker, Arik; Ehrbar, Martin (2015). Protein adsorption steers blood contact activation on engineered cobalt chromium alloy oxide layers. Acta Biomaterialia, 24:343-351.

Gámez-Pozo, Angelo; Berges-Soria, Julia; Arevalillo, Jorge M; Nanni, Paolo; López-Vacas, Rocío; Navarro, Hilario; Grossmann, Jonas; Castaneda, Carlos A; Main, Paloma; Díaz-Almirón, Mariana; Espinosa, Enrique; Ciruelos, Eva; Fresno Vara, Juan Ángel (2015). Combined Label-Free Quantitative Proteomics and microRNA Expression Analysis of Breast Cancer Unravel Molecular Differences with Clinical Implications. Cancer Research, 75(11):2243-2253.

Panse, Christian; Trachsel, Christian; Grossmann, Jonas; Schlapbach, Ralph (2015). specL - An R/Bioconductor package to prepare peptide spectrum matches for use in targeted proteomics. Bioinformatics, 31(13):2228-2231.

Bao, Kai; Belibasakis, Georgios N; Selevsek, Nathalie; Grossmann, Jonas; Bostanci, Nagihan (2015). Proteomic profiling of host-biofilm interactions in an oral infection model resembling the periodontal pocket. Scientific Reports, 5:15999.

Trachsel, Christian; Panse, Christian; Grossmann, Jonas (2014). specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics. Bioconductor R Package v1.1.13 Bioc 3.0, University of Zurich.

Kentner, David; Martano, Giuseppe; Callon, Morgane; Chiquet, Petra; Brodmann, Maj; Burton, Olga; Wahlander, Asa; Nanni, Paolo; Delmotte, Nathanaël; Grossmann, Jonas; Limenitakis, Julien; Schlapbach, Ralph; Kiefer, Patrick; Vorholt, Julia A; Hiller, Sebastian; Bumann, Dirk (2014). Shigella reroutes host cell central metabolism to obtain high-flux nutrient supply for vigorous intracellular growth. Proceedings of the National Academy of Sciences of the United States of America, 111(27):9929-9934.

Vanderschuren, Hervé; Nyaboga, Evans; Poon, Jacquelyne S; Baerenfaller, Katja; Grossmann, Jonas; Hirsch-Hoffmann, Matthias; Kirchgessner, Norbert; Nanni, Paolo; Gruissem, Wilhelm (2014). Large-Scale Proteomics of the Cassava Storage Root and Identification of a Target Gene to Reduce Postharvest Deterioration. Plant Cell, 26(5):1913-1924.

Müller, Jonas E N; Litsanov, Boris; Bortfeld-Miller, Miriam; Trachsel, Christian; Grossmann, Jonas; Brautaset, Trygve; Vorholt, Julia A (2014). Proteomic analysis of the thermophilic methylotroph Bacillus methanolicus MGA3. Proteomics, 14(6):725-37.

Warinner, Christina; Rodrigues, João F Matias; Vyas, Rounak; Trachsel, Christian; Shved, Natallia; Grossmann, Jonas; Radini, Anita; Hancock, Y; Tito, Raul Y; Fiddyment, Sarah; Speller, Camilla; Hendy, Jessica; Charlton, Sophy; Luder, Hans Ulrich; Salazar-García, Domingo C; Eppler, Elisabeth; Seiler, Roger; Hansen, Lars H; Castruita, José Alfredo Samaniego; Barkow-Oesterreicher, Simon; Teoh, Kai Yik; Kelstrup, Christian D; Olsen, Jesper V; Nanni, Paolo; Kawai, Toshihisa; Willerslev, Eske; von Mering, Christian; Lewis, Cecil M; Collins, Matthew J; Gilbert, M Thomas P; Rühli, Frank J; Cappellini, Enrico (2014). Pathogens and host immunity in the ancient human oral cavity. Nature Genetics, 46(4):336-344.

Uzozie, Anuli; Nanni, Paolo; Staiano, Teresa; Grossmann, Jonas; Barkow-Oesterreicher, Simon; Shay, Jerry W; Tiwari, Amit; Buffoli, Federico; Laczko, Endre; Marra, Giancarlo (2014). Sorbitol dehydrogenase overexpression and other aspects of dysregulated protein expression in human precancerous colorectal neoplasms: a quantitative proteomics study. Molecular & Cellular Proteomics, 13(5):1198-1218.

Trinh, Hung V; Grossmann, Jonas; Gehrig, Peter; Roschitzki, Bernd; Schlapbach, Ralph; Greber, Urs F; Hemmi, Silvio (2013). iTRAQ-based and label-free proteomics approaches for studies of human adenovirus infections. International Journal of Proteomics, 2013:581862.

Weisser, Hendrik; Nahnsen, Sven; Grossmann, Jonas; Nilse, Lars; Quandt, Andreas; Brauer, Hendrik; Sturm, Marc; Kenar, Erhan; Kohlbacher, Oliver; Aebersold, Ruedi; Malmström, Lars (2013). An automated pipeline for high-throughput label-free quantitative proteomics. Journal of Proteome Research, 12(4):1628-1644.

Nanni, Paolo; Panse, Christian; Gehrig, Peter; Mueller, Susanne; Grossmann, Jonas; Schlapbach, Ralph (2013). PTM MarkerFinder, a software tool to detect and validate spectra from peptides carrying post-translational modifications. Proteomics, 13(15):2251-2255.

Tweedie-Cullen, Ry Y; Brunner, Andrea M; Grossmann, Jonas; Mohanna, Safa; Sichau, David; Nanni, Paolo; Panse, Christian; Mansuy, Isabelle M (2012). Identification of combinatorial patterns of post-translational modifications on individual histones in the mouse brain. PLoS ONE, 7(5):e36980.

Trachsel, Christian; Siegemund, Doreen; Kämpfer, Urs; Kopp, Lukas S; Bühr, Claudia; Grossmann, Jonas; Lüthi, Christoph; Cunningham, Monica; Nentwig, Wolfgang; Kuhn-Nentwig, Lucia; Schürch, Stefan; Schaller, Johann (2012). Multicomponent venom of the spider Cupiennius salei: a bioanalytical investigation applying different strategies. FEBS Journal, 279(15):2683-2694.

Bischof, Sylvain; Grossmann, Jonas; Gruissem, Wilhelm (2012). Proteomics and its application in plant biotechnology. In: Altman, Arie; Hasegawa, Paul Michael. Plant Biotechnology and Agriculture. Prospects for the 21st Century. San Diego: Academic Press, 55-65.

This list was generated on Sat Jun 15 15:31:49 2019 CEST.