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Heizmann, C W (2008). S100 Proteins. In: Offermanns, S; Rosenthal, W. Encyclopedia of Molecular Pharmacology. Berlin Heidelberg, Germany: Springer, 1101-1106.

Vallelian, F; Pimenova, T; Pereira, C P; Abraham, B; Mikolajczyk, M G; Schoedon, G; Zenobi, R; Schaer, D J (2008). The reaction of hydrogen peroxide with hemoglobin induces extensive alpha-globin crosslinking and impairs the interaction of hemoglobin with endogenous scavenger pathways. Free Radical Biology and Medicine, 45(8):1150-1158.

Schildknecht, S; van der Loo, B; Weber, K; Tiefenthaler, K; Daiber, A; Bachschmid, M M (2008). Endogenous peroxynitrite modulates PGHS-1–dependent thromboxane A2 formation and aggregation in human platelets. Free Radical Biology and Medicine, 45(4):512-520.

Odermatt, D; Heege, T; Nieke, Jens; Kneubühler, M; Itten, Klaus (2008). Water quality monitoring for Lake Constance with a physically based algorithm for MERIS data. Sensors, 8(8):4582-4599.

Mlostoń, Grzegorz; Woźnicka, M; Drabowicz, J; Linden, Anthony; Heimgartner, H (2008). Addition reactions of sulfenyl and sulfinyl chlorides with 3-phenyl-1-azabicyclo[1.1.0]butane. Helvetica Chimica Acta, 91(8):1419-1429.

Lindert, U; Leuzinger, L; Steiner, K; Georgiev, O; Schaffner, W (2008). Characterization of metal-responsive transcription factor (MTF-1) from the giant rodent capybara reveals features in common with human as well as with small rodents (mouse, rat). Short communication. Chemistry & Biodiversity, 5(8):1485-1494.

Diaz Sanchez-Bustamante, Carlota; Kelm, Jens M; Egermann, Marcus; Djonov, Valentin; Fussenegger, Martin (2008). Ectopic expression of delta FBJ murine osteosarcoma viral oncogene homolog B mediates transdifferentiation of adipose-like spheroids into osteo-like microtissues. Tissue Engineering. Part A, 14(8):1377-1394.

Bailly, A; Sovero, V; Vincenzetti, V; Santelia, D; Bartnik, D; Koenig, B W; Mancuso, S; Martinoia, E; Geisler, M (2008). Modulation of P-glycoproteins by auxin transport inhibitors is mediated by interaction with immunophilins. Journal of Biological Chemistry, 283(31):21817-21826.

Truzzi, F; Marconi, A; Lotti, R; Dallaglio, K; French, L E; Hempstead, B L; Pincelli, C (2008). Neurotrophins and their receptors stimulate melanoma cell proliferation and migration. Journal of Investigative Dermatology, 128(8):2031-2040.

Rehrauer, H; Schönmann, S; Eberl, L; Schlapbach, R (2008). PhyloDetect: a likelihood-based strategy for detecting microorganisms with diagnostic microarrays. Bioinformatics, 24(16):i83-i89.

Bisegger, P; Manov, N; Bienz, S (2008). Solid-phase synthesis of cyclic polyamines. Tetrahedron, 64(32):7531-7536.

Klosterman, J K; Linden, Anthony; Siegel, J S (2008). Synthesis of aryl-substituted 2-pyridyl-1,10-phenanthrolines : a series of oriented terpyridine analogues. Organic & Biomolecular Chemistry, 6(15):2755-2764.

Verbeek, M M; Willemsen, M A A P; Wevers, R A; Lagerwerf, A J; Abeling, N G G M; Blau, N; Thöny, B; Vargiami, E; Zafeiriou, D I (2008). Two Greek siblings with sepiapterin reductase deficiency. Molecular Genetics and Metabolism, 94(4):403-409.

Mukhopadhyay, D; Howell, K S; Riezman, H; Capitani, G (2008). Identifying key residues of sphinganine-1-phosphate lyase for function in vivo and in vitro. Journal of Biological Chemistry, 283(29):20159-20169.

Dreiseitel, A; Schreier, P; Oehme, A; Locher, S; Rogler, G; Piberger, H; Hajak, G; Sand, P G (2008). Inhibition of proteasome activity by anthocyanins and anthocyanidins. Biochemical and Biophysical Research Communications (BBRC), 372(1):57-61.

Sharma, S K; Goloubinoff, P; Christen, P (2008). Heavy metal ions are potent inhibitors of protein folding. Biochemical and Biophysical Research Communications (BBRC), 372(2):341-345.

Tao, M; Casutt, M S; Fritz, G; Steuber, J (2008). Oxidant-induced formation of a neutral flavosemiquinone in the Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) from Vibrio cholerae. Biochim. Biophys. Acta: Bioenergetics, 1777(7-8):696-702.

Clauss, Marcus; Streich, W J; Nunn, C L; Ortmann, S; Hohmann, G; Schwarm, A; Hummel, J (2008). The influence of natural diet composition, food intake level, and body size on ingesta passage in primates. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 150(3):274-281.

Erat, M C; Sigel, Roland K O (2008). Divalent Metal Ions Tune the Self-Splicing Reaction of the Yeast Mitochondrial Group II Intron Sc.ai5γ. Journal of Biological Inorganic Chemistry, 13(6):1025-1036.

Landolt, H P (2008). Sleep homeostasis: a role for adenosine in humans? Biochemical Pharmacology, 75(11):2070-2079.

Vacca, R A; Giannattasio, S; Capitani, G; Marra, E; Christen, P (2008). Molecular evolution of B6 enzymes: binding of pyridoxal-5'-phosphate and Lys41Arg substitution turn ribonuclease A into a model B6 protoenzyme. BMC Biochemistry, 9:17.

Stephan, A; Mateos, J M; Kozlov, S V; Cinelli, P; Kistler, A D; Hettwer, S; Rülicke, T; Streit, P; Kunz, B; Sonderegger, P (2008). Neurotrypsin cleaves agrin locally at the synapse. FASEB Journal, 22(6):1861-73.

Orihuela, R; Domènech, J; Bofill, R; You, C; Mackay, E A; Kägi, J H R; Capdevila, M; Atrian, S (2008). The metal-binding features of the recombinant mussel Mytilus edulis MT-10-IV metallothionein. Journal of Biological Inorganic Chemistry, 13(5):801-12.

Ren, H; Dou, S X; Zhang, X D; Wang, P Y; Kanagaraj, R; Liu, J L; Janscak, Pavel; Hu, J S; Xi, X G (2008). The zinc-binding motif of human RECQ5beta suppresses the intrinsic strand-annealing activity of its DExH helicase domain and is essential for the helicase activity of the enzyme. Biochemical Journal, 412(3):425-433.

Gomez-Bengoa, E; Linden, Anthony; Lopez, R; Mugica-Mendiola, I; Oiarbide, M; Palomo, C (2008). Asymmetric aza-Henry reaction under phase transfer catalysis: An experimental and theoretical study. Journal of the American Chemical Society, 130(25):7955-7966.

Gallo, S; Oberhuber, M; Sigel, Roland K O; Kräutler, B (2008). The corrin moiety of coenzyme B12 is the determinant for switching the btuB riboswitch of E. coli. ChemBioChem, 9(9):1408-1414.

Stallmach, R; Gloor, S M (2008). Neurobin/TMPRSS11c, a novel type II transmembrane serine protease that cleaves fibroblast growth factor-2 in vitro. Biochemical Journal, 412(1):81-91.

Schneider, M R; Antsiferova, M; Feldmeyer, L; Dahlhoff, M; Bugnon, P; Hasse, S; Paus, R; Wolf, E; Werner, S (2008). Betacellulin regulates hair follicle development and hair cycle induction and enhances angiogenesis in wounded skin. Journal of Investigative Dermatology, 128(5):1256-1265.

Halbach, S; Vogt, S; Köhler, W; Felgenhauer, N; Welzl, D; Kremers, L; Zilker, T; Melchart, D (2008). Blood and urine mercury levels in adult amalgam patients of a randomized controlled trial: Interaction of Hg species in erythrocytes. Environmental Research, 107(1):69-78.

Pierce, A; Unwin, R D; Evans, C A; Griffiths, S; Carney, L; Zhang, L; Jaworska, E; Lee, C F; Blinco, D; Okoniewski, M J; Miller, C J; Bitton, D A; Spooncer, E; Whetton, A D (2008). Eight-channel iTRAQ enables comparison of the activity of six leukemogenic tyrosine kinases. Molecular & Cellular Proteomics, 7(5):853-63.

Schwarm, A; Ortmann, S; Wolf, C; Streich, W J; Clauss, Marcus (2008). Excretion patterns of fluid and different sized particle passage markers in banteng (Bos javanicus) and pygmy hippopotamus (Hexaprotodon liberiensis): two functionally different foregut fermenters. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 150(1):32-39.

Luan, X; Mariz, R; Gatti, M; Costabile, C; Poater, A; Cavallo, L; Linden, Anthony; Dorta, R (2008). Identification and characterization of a new family of catalytically highly active imidazolin-2-ylidenes. Journal of the American Chemical Society, 130(21):6848-6858.

Contassot, E; Kerl, K; Roques, S; Shane, R; Gaide, O; Dupuis, M; Rook, A H; French, L E (2008). Resistance to FasL and tumor necrosis factor-related apoptosis-inducing ligand-mediated apoptosis in Sezary syndrome T-cells associated with impaired death receptor and FLICE-inhibitory protein expression. Blood, 111(9):4780-4787.

Gruber-Olipitz, M; Ströbel, T; Chen, W; Grotzer, M A; Quehenberger, F; Slavc, I; Lubec, G (2008). Synthesis, chaperoning, and metabolism of proteins are regulated by NT-3/TrkC signaling in the medulloblastoma cell line DAOY. Journal of Proteome Research, 7(5):1932-1944.

Kolb, P; Kipouros, C B; Huang, D; Caflisch, A (2008). Structure-based tailoring of compound libraries for high-throughput screening: discovery of novel EphB4 kinase inhibitors. Proteins, 73(1):11-8.

Connor, E C; Rott, A S; Zeder, M; Jüttner, F; Dorn, S (2008). 13C-labelling patterns of green leaf volatiles indicating different dynamics of precursors in Brassica leaves. Phytochemistry, 69(6):1304-1312.

Xiao, W; Passerone, D; Ruffieux, P; Aït-Mansour, K; Gröning, O; Tosatti, E; Siegel, J S; Fasel, R (2008). C60/corannulene on Cu(110): a surface-supported bistable buckybowl-buckyball host-guest system. Journal of the American Chemical Society, 130(14):4767-4771.

Gutte, B (2008). Solid-phase synthesis for a lifetime. Biopolymers, 90(3):214.

Cozzio, A; French, L E (2008). T-cell clonality assays: how do they compare? Journal of Investigative Dermatology, 128(4):771-773.

Wu, F; Yu, J; Gehring, H (2008). Inhibitory and structural studies of novel coenzyme-substrate analogs of human histidine decarboxylase. FASEB Journal, 22(3):890-897.

Eidam, O; Dworkowski, F S N; Glockshuber, R; Grütter, M G; Capitani, G (2008). Crystal structure of the ternary FimC-FimF(t)-FimD(N) complex indicates conserved pilus chaperone-subunit complex recognition by the usher FimD. FEBS Letters, 582(5):651-655.

Nater, U M; Maloney, E; Boneva, R S; Gurbaxani, B M; Lin, J M; Jones, J F; Reeves, W C; Heim, C (2008). Attenuated morning salivary cortisol concentrations in a population-based study of persons with chronic fatigue syndrome and well controls. Journal of Clinical Endocrinology and Metabolism, 93(3):703-709.

Ruiz-Sánchez, P; Mundwiler, S; Spingler, B; Buan, N R; Escalante-Semerena, J C; Alberto, R (2008). Syntheses and characterization of vitamin B12-Pt(II) conjugates and their adenosylation in an enzymatic assay. Journal of Biological Inorganic Chemistry, 13(3):335-347.

Kizawa, K; Takahara, H; Troxler, H; Kleinert, P; Mochida, U; Heizmann, C W (2008). Specific citrullination causes assembly of a globular S100A3 homotetramer: a putative Ca2+ modulator matures human hair cuticle. Journal of Biological Chemistry, 283(8):5004-5013.

Cohen, L S; Arshava, B; Estephan, R; Englander, J; Kim, H; Hauser, M; Zerbe, O; Ceruso, M; Becker, J M; Naider, F (2008). Expression and biophysical analysis of two double transmembrane domain-containing fragments from a yeast G protein-coupled receptor. Biopolymers, 90(2):117-130.

Zimmerli, L U; Schiffer, E; Zürbig, P; Good, D M; Kellmann, M; Mouls, L; Pitt, A R; Coon, J J; Schmieder, R E; Peter, K H; Mischak, H; Kolch, W; Delles, C; Dominiczak, A F (2008). Urinary proteomic biomarkers in coronary artery disease. Molecular & Cellular Proteomics, 7(2):290-298.

Mariz, R; Luan, X; Gatti, M; Linden, Anthony; Dorta, R (2008). A chiral bis-sulfoxide ligand in late-transition metal catalysis; rhodium-catalyzed asymmetric addition of arylboronic acids to electron-deficient olefins. Journal of the American Chemical Society, 130(7):2172-2173.

Lichtlen, P; Mohajeri, M H (2008). Antibody-based approaches in Alzheimer's research: safety, pharmacokinetics, metabolism, and analytical tools. Journal of Neurochemistry, 104(4):859-874.

Bjelic, S; Wieninger, S; Jelesarov, I; Karshikoff, A (2008). Electrostatic contribution to the thermodynamic and kinetic stability of the homotrimeric coiled coil Lpp-56: A computational study. Proteins, 70(3):810-822.

Schramm, Michael P; Restorp, Per; Zelder, Felix; Rebek, Julius Jr (2008). Influence of remote asymmetric centers in reversible encapsulation complexes. Journal of the American Chemical Society, 130(8):2450-2451.

Liu, Y; Spingler, B; Schmutz, P; Alberto, R (2008). Metal-mediated retro Diels-Alder of dicyclopentadiene derivatives: a convenient synthesis of [(Cp-R)M(CO)3] (M = 99mTc, Re) complexes. Journal of the American Chemical Society, 130(5):1554-1555.

Sommen, G L; Linden, Anthony; Heimgartner, H (2008). Selenium-containing heterocycles from isoselenocyanates:5-methylselenazole derivatives from the reaction with malononitrile and propargyl chloride. Helvetica Chimica Acta, 91(2):209-219.

Müller, J; Polonius, F A; Freisinger, Eva; Bardají, E G (2008). X-ray crystallographic study of several 2′-deoxy-β-d-ribonucleosides with 1-deazapurine-derived aglycones. Carbohydrate Research, 343(2):397-403.

Tao, M; Fritz, G; Steuber, J (2008). The Na+ -translocating NADH:quinone oxidoreductase (Na+ -NQR) from Vibrio cholerae enhances insertion of FeS in overproduced NqrF subunit. J. Inorg. Biochem., 102(5-6):1366-1372.

Christen, Barbara; Wüthrich, Kurt; Hornemann, Simone (2008). Putative prion protein from Fugu (Takifugu rubripes). FEBS Journal, 275(2):263-270.

Zimmerli, S C; Kerl, K; Hadj-Rabia, S; Hohl, D; Hauser, C (2008). Human epidermal Langerhans cells express the tight junction protein claudin-1 and are present in human genetic claudin-1 deficiency (NISCH syndrome). Experimental Dermatology, 17(1):20-23.

Hofmann, S C; Voith, U; Sasaki, T; Trüeb, R M; Nischt, R; Bruckner-Tuderman, L (2008). The autoantigen in anti-p200 pemphigoid is synthesized by keratinocytes and fibroblasts and is distinct from nidogen-2. Journal of Investigative Dermatology, 128(1):87-95.

Schenker, P; Alfarano, P; Kolb, P; Caflisch, A; Baici, A (2008). A double-headed cathepsin B inhibitor devoid of warhead. Protein Science : a Publication of the Protein Society, 17(12):2145-2155.

Eng, J K; Fischer, B; Grossmann, J; Maccoss, M J (2008). A fast SEQUEST cross correlation algorithm. Journal of Proteome Research, 7(10):4598-4602.

Eberli, Daniel; Susaeta, Ricardo; Yoo, James J; Atala, Anthony (2008). A method to improve cellular content for corporal tissue engineering. Tissue Engineering. Part A, 14(10):1581-1589.

Landmesser, T; Linden, Anthony; Hansen, H J (2008). A novel route to 1-substituted 3-(dialkylamino)-9-oxo-9H-indeno[2,1-c]pyridine-4-carbonitriles. Helvetica Chimica Acta, 91(2):265-284.

Schuepbach, Reto A; Feistritzer, Clemens; Brass, Lawrence F; Riewald, Matthias (2008). Activated protein C-cleaved protease activated receptor-1 is retained on the endothelial cell surface even in the presence of thrombin. Blood, 111(5):2667-2673.

Malinge, S; Ragu, C; Della-Valle, V; Pisani, D; Constantinescu, S N; Perez, C; Villeval, J-l; Reinhardt, D; Landman-Parker, J; Michaux, L; Dastugue, N; Baruchel, A; Vainchenker, W; Bourquin, J-P; Penard-Lacronique, V; Bernard, O A (2008). Activating mutations in human acute megakaryoblastic leukemia. Blood, 112(10):4220-4226.

Schmidt, Alexander; Gehlenborg, Nils; Bodenmiller, Bernd; Mueller, Lukas N; Campbell, Dave; Mueller, Markus; Aebersold, Ruedi; Domon, Bruno (2008). An integrated, directed mass spectrometric approach for in-depth characterization of complex peptide mixtures. Molecular & Cellular Proteomics, 7(11):2138-2150.

Horvath, G A; Stockler-Ipsiroglu, S G; Salvarinova-Zivkovic, R; Lillquist, Y P; Connolly, M; Hyland, K; Blau, N; Rupar, T; Waters, P J (2008). Autosomal recessive GTP cyclohydrolase I deficiency without hyperphenylalaninemia: Evidence of a phenotypic continuum between dominant and recessive forms. Molecular Genetics and Metabolism, 94(1):127-131.

Wong, W W L; Puthalakath, H (2008). Bcl-2 family proteins: The sentinels of the mitochondrial apoptosis pathway. IUBMB Life, 60(6):390-397.

Schaub, M C; Heizmann, C W (2008). Calcium, troponin, calmodulin, S100 proteins: from myocardial basics to new therapeutic strategies. Biochemical and Biophysical Research Communications (BBRC), 369(1):247-264.

Galichet, Arnaud; Weibel, Mirjam; Heizmann, Claus W (2008). Calcium-regulated intramembrane proteolysis of the RAGE receptor. Biochemical and Biophysical Research Communications (BBRC), 370(1):1-5.

Palomo, C; Oiarbide, M; García, J M; Bañuelos, P; Odriozola, J M; Razkin, J; Linden, Anthony (2008). Catalytic Michael reactions of ketoesters with a camphor-derived acrylate equivalent: stereoselective access to all-carbon quaternary centers. Organic Letters, 10(13):2637-2640.

Wenger, D; Gerecke, A; Heeb, N; Naegeli, H; Zenobi, R (2008). Catalytic diesel particulate filters reduce the in vitro estrogenic activity of diesel exhaust. Analytical and Bioanalytical Chemistry, 390(8):2021-2029.

Bich, C; Scott, M; Panagiotidis, A; Wenzel, R J; Nazabal, A; Zenobi, R (2008). Characterization of antibody-antigen interactions: comparison between surface plasmon resonance measurements and high-mass matrix-assisted laser desorption/ionization mass spectrometry. Analytical Biochemistry, 375(1):35-45.

Merki-Feld, Gabriele S; Seeger, Harald; Mueck, Alfred O (2008). Comparison of the proliferative effects of ethinylestradiol on human breast cancer cells in an intermittent and a continuous dosing regime. Hormone and metabolic research, 40(3):206-209.

Matthews, J M; Bhati, M; Craig, V J; Deane, J E; Jeffries, C; Lee, C; Nancarrow, A L; Ryan, D P; Sunde, M (2008). Competition between LIM-binding domains. Biochemical Society Transactions, 36(Pt 6):1393-1397.

Masson, F; Laino, T; Tavernelli, I; Rothlisberger, U; Hutter, J (2008). Computational study of Thymine dimer radical anion splitting in the self-repair process of duplex DNA. Journal of the American Chemical Society, 130(11):3443-3450.

Bruell, C M; Eichholz, C; Kubarenko, A; Post, V; Katunin, V I; Hobbie, S N; Rodnina, M V; Böttger, E C (2008). Conservation of bacterial protein synthesis machinery: initiation and elongation in Mycobacterium smegmatis. Biochemistry, 47(34):8828-8839.

Wimmer, U; Ferrari, E; Hunziker, P; Hübscher, U (2008). Control of DNA polymerase lambda stability by phosphorylation and ubiquitination during the cell cycle. EMBO Reports, 9(10):1027-1033.

DeBoer, S R; You, Y; Szodorai, A; Kaminska, A; Pigino, G; Nwabuisi, E; Wang, B; Estrada-Hernandez, T; Kins, S; Brady, S; Morfini, G (2008). Conventional kinesin holoenzymes are composed of heavy and light chain homodimers. Biochemistry, 47(15):4535-4543.

Brusniak, Mi-Youn; Bodenmiller, Bernd; Campbell, David; Cooke, Kelly; Eddes, James; Garbutt, Andrew; Lau, Hollis; Letarte, Simon; Mueller, Lukas N; Sharma, Vagisha; Vitek, Olga; Zhang, Ning; Aebersold, Ruedi; Watts, Julian D (2008). Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics. BMC Bioinformatics, 9:542.

Picard, N; Eladari, D; El Moghrabi, S; Planès, C; Bourgeois, S; Houillier, P; Wang, Q; Burnier, M; Deschenes, G; Knepper, M A; Meneton, P; Chambrey, R (2008). Defective ENaC processing and function in tissue kallikrein-deficient mice. Journal of Biological Chemistry, 283(8):4602-4611.

Kim, D D; Miwa, T; Kimura, Y; Schwendener, R; van Lookeren Campagne, M; Song, W C (2008). Deficiency of decay-accelerating factor and complement receptor 1-related gene/protein y on murine platelets leads to complement-dependent clearance by the macrophage phagocytic receptor CRIg. Blood, 112(4):1109-1119.

Blasius, M; Sommer, S; Hubscher, U (2008). Deinococcus radiodurans: What Belongs to the Survival Kit? Critical Reviews in Biochemistry and Molecular Biology, 43(3):221-238.

Kruschel, D; Sigel, Roland K O (2008). Divalent metal ions promote the formation of the 5′-splice site recognition complex in a self-splicing group II intron. Journal of Inorganic Biochemistry, 102(12):2147-2154.

Akhmetshina, A; Dees, C; Pileckyte, M; Maurer, B; Axmann, R; Jüngel, A; Zwerina, J; Gay, S; Schett, G; Distler, O; Distler, J H W (2008). Dual inhibition of c-abl and PDGF receptor signaling by dasatinib and nilotinib for the treatment of dermal fibrosis. FASEB Journal, 22(7):2214-2222.

Grieshaber, D; MacKenzie, R; Vörös, J; Reimhult, E (2008). Electrochemical biosensors - sensor principles and architectures. Sensors, 8(3):1400-1458.

Honegger, A (2008). Engineering antibodies for stability and efficient folding. In: Chernajovsky, Y; Nissim, A. Therapeutic Antibodies. Berlin, Heidelberg: Springer, 47-68.

Jehle, M; Perler, D; Small, David; Schubert, A; Meier, E (2008). Estimation of atmospheric path delays in TerraSAR-X data using models vs. measurements. Sensors, 8(12):8479 -8491.

von Rechenberg, Brigitte (2008). Experiences with sheep models in musculoskeletal research at the MSRU. European Cells and Materials, 16(Suppl. 4):31.

Hummel, J; Steuer, P; Südekum, K H; Hammer, S; Hammer, C; Streich, W J; Clauss, Marcus (2008). Fluid and particle retention in the digestive tract of the addax antelope (Addax nasomaculatus)--adaptations of a grazing desert ruminant. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 149(2):142-149.

Pizard, A; Richer, C; Bouby, N; Picard, N; Meneton, P; Azizi, M; Alhenc-Gelas, F (2008). Genetic deficiency in tissue kallikrein activity in mouse and man: effect on arteries, heart and kidney. Biological Chemistry, 389(6):701-706.

Flotho, C; Kratz, C P; Bergsträsser, E; Hasle, H; Starý, J; Trebo, M; van den Heuvel-Eibrink, M M; Wójcik, D; Zecca, M; Locatelli, F; Niemeyer, C M (2008). Genotype-phenotype correlation in cases of juvenile myelomonocytic leukemia with clonal RAS mutations. Blood, 111(2):966-7; author reply 967.

Maedler, K; Schulthess, F T; Bielman, C; Berney, T; Bonny, C; Prentki, M; Donath, M Y; Roduit, R (2008). Glucose and leptin induce apoptosis in human beta-cells and impair glucose-stimulated insulin secretion through activation of c-Jun N-terminal kinases. FASEB Journal, 22(6):1905-1913.

Philibert, P; Biason-Lauber, A; Rouzier, R; Pienkowski, C; Paris, F; Konrad, D; Schoenle, E; Sultan, C (2008). Identification and functional analysis of a new WNT4 gene mutation among 28 adolescent girls with primary amenorrhea and müllerian duct abnormalities: a French collaborative study. Journal of Clinical Endocrinology and Metabolism, 93(3):895-900.

Haenni, S S; Hassa, P O; Altmeyer, M; Fey, M; Imhof, R; Hottiger, M O (2008). Identification of lysines 36 and 37 of PARP-2 as targets for acetylation and auto-ADP-ribosylation. International Journal of Biochemistry & Cell Biology, 40(10):2274-2283.

Pahlich, S; Zakaryan, R; Gehring, H (2008). Identification of proteins interacting with protein arginine methyltransferase 8: The Ewing sarcoma (EWS) protein binds independent of its methylation state. Proteins, 72(4):1125-1137.

Harris, T R; Aronov, A; Jones, P D; Tanaka, H; Arand, Michael; Hammock, B D (2008). Identification of two epoxide hydrolases in Caenorhabditis elegans that metabolize mammalian lipid signaling molecules. Archives of Biochemistry and Biophysics, 472(2):139-149.

Akdis, C A (2008). Immune regulation by histamine H4 receptors in skin. Journal of Investigative Dermatology, 128(7):1615-1616.

Bolinger, B; Krebs, P; Tian, Y; Engeler, D; Scandella, E; Miller, S; Palmer, D C; Restifo, N P; Clavien, P A; Ludewig, B (2008). Immunologic ignorance of vascular endothelial cells expressing minor histocompatibility antigen. Blood, 111(9):4588-4595.

Helmchen, F; Kleinfeld, D (2008). In vivo measurements of blood flow and glial cell function with two-photon laser scanning microscopy. In: Cheresh, D A. Angiogenesis : in vivo systems. Amsterdam: Elsevier, 231-254.

Böni-Schnetzler, M; Thorne, J; Parnaud, G; Marselli, L; Ehses, J A; Kerr-Conte, J; Pattou, F; Halban, P A; Weir, G C; Donath, M Y (2008). Increased interleukin (IL)-1beta messenger ribonucleic acid expression in beta -cells of individuals with type 2 diabetes and regulation of IL-1beta in human islets by glucose and autostimulation. Journal of Clinical Endocrinology and Metabolism, 93(10):4065-4074.

Zeller, A; Jurd, R; Lambert, S; Arras, M; Drexler, B; Grashoff, C; Antkowiak, B; Rudolph, U (2008). Inhibitory ligand-gated ion channels as substrates for general anesthetic action. In: Schüttler, J; Schwilden, H. Handbook of Experimental Pharmacology: Modern Anesthetics. Berlin: Springer, 31-52.

Ulintz, Peter J; Bodenmiller, Bernd; Andrews, Philip C; Aebersold, Ruedi; Nesvizhskii, Alexey I (2008). Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence. Molecular & Cellular Proteomics, 7(1):71-87.

Heimgartner, H; Zhou, Y; Atanassov, P K; Sommen, G L (2008). Isoselenocyanates as building blocks for Selenium-containing heterocycles. Phosphorus, Sulfur and Silicon and the Related Elements, 183(4):840-855.

Muff, S; Caflisch, A (2008). Kinetic analysis of molecular dynamics simulations reveals changes in the denatured state and switch of folding pathways upon single-point mutation of a beta-sheet miniprotein. Proteins, 70(4):1185-1195.

Ozsahin, H; Cavazzana-Calvo, M; Notarangelo, L D; Schulz, A; Thrasher, A J; Mazzolari, E; Slatter, M A; Le Deist, F; Blanche, S; Veys, P; Fasth, A; Bredius, R; Sedlacek, P; Wulffraat, N; Ortega, J; Heilmann, C; O'Meara, A; Wachowiak, J; Kalwak, K; Matthes-Martin, S; Güngör, Tayfun; Ikinciogullari, A; Landais, P; Cant, A J; Friedrich, W; Fischer, A (2008). Long-term outcome following hematopoietic stem-cell transplantation in Wiskott-Aldrich syndrome: collaborative study of the European Society for Immunodeficiencies and European Group for Blood and Marrow Transplantation. Blood, 111(1):439-445.

Ehses, J A; Böni-Schnetzler, M; Faulenbach, M; Donath, M Y (2008). Macrophages, cytokines and beta-cell death in Type 2 diabetes. Biochemical Society Transactions, 36(Pt 3):340-342.

Fiore, R; Siegel, G; Schratt, G (2008). MicroRNA function in neuronal development, plasticity and disease. Biochimica et Biophysica Acta, 1779(8):471-478.

Munn, A J; Streich, W J; Hummel, Jürgen; Clauss, Marcus (2008). Modelling digestive constraints in non-ruminant and ruminant foregut-fermenting mammals. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 151(1):78-84.

Gauntlett, J C; Gebhard, S; Keis, S; Manson, J M; Pos, K M; Cook, G M (2008). Molecular analysis of BcrR, a membrane-bound bacitracin sensor and DNA-binding protein from Enterococcus faecalis. Journal of Biological Chemistry, 283(13):8591-8600.

Gisler, S M; Kittanakom, S; Fuster, D; Wong, V; Bertic, M; Randanovic, T; Hall, R A; Murer, H; Biber, J; Markovich, D; Moe, O W; Stagljar, I (2008). Monitoring protein-protein interactions between the mammalian integral membrane transporters and PDZ-interacting partners using a modified split-ubiquitin membrane yeast two-hybrid system. Molecular & Cellular Proteomics, 7:1362-1377.

Wu, Y T; Bandera, D; Maag, R; Linden, Anthony; Baldridge, K K; Siegel, J S (2008). Multiethynyl corannulenes: synthesis, structure, and properties. Journal of the American Chemical Society, 130(32):10729-10739.

Indiveri, G (2008). Neuromorphic VLSI models of selective attention: from single chip vision sensors to multi-chip systems. Sensors, 8(9):5352-5375.

Jäggi, L; Zurflüh, M R; Schuler, A; Ponzone, A; Porta, F; Fiori, L; Giovannini, M; Santer, R; Hoffmann, G F; Ibel, H; Wendel, U; Ballhausen, D; Baumgartner, Matthias R; Blau, N (2008). Outcome and long-term follow-up of 36 patients with tetrahydrobiopterin deficiency. Molecular Genetics and Metabolism, 93(3):295-305.

Friedman, R; Caflisch, A (2008). Pepsinogen-like activation intermediate of plasmepsin II revealed by molecular dynamics analysis. Proteins, 73(4):814-827.

Malanga, M; Czubaty, A; Girstun, A; Staron, K; Althaus, F R (2008). Poly(ADP-ribose) binds to the splicing factor ASF/SF2 and regulates its phosphorylation by DNA topoisomerase I. Journal of Biological Chemistry, 283(29):19991-19998.

Pflieger, D; Jünger, M A; Müller, M; Rinner, O; Lee, H; Gehrig, P M; Gstaiger, M; Aebersold, R (2008). Quantitative proteomic analysis of protein complexes: concurrent identification of interactors and their state of phosphorylation. Molecular and Cellular Proteomics, 7(2):326-346.

Holland, R L; Bunker, K D; Chen, C H; DiPasquale, A G; Rheingold, A L; Baldridge, K K; O'Connor, J M (2008). Reactions of a metallacyclobutene complex with alkenes. Journal of the American Chemical Society, 130(31):10093-10095.

Möhler, H; Rudolph, U; Boison, D; Singer, P; Feldon, J; Yee, B K (2008). Regulation of cognition and symptoms of psychosis: focus on GABA(A) receptors and glycine transporter 1. Pharmacology Biochemistry and Behavior, 90(1):58-64.

Möricke, A; Reiter, A; Zimmermann, M; Gadner, H; Stanulla, M; Dördelmann, N; Löning, L; Beier, R; Ludwig, W D; Ratei, R; Harbott, J; Boos, H; Mann, G; Niggli, F; Feldges, A; Henze, G; Welte, K; Beck, J D; Klingebiel, T; Niemeyer, C; Zintl, F; Bode, U; Urban, C; Wehinger, H; Niethammer, D; Riehm, H; Schrappe, M (2008). Risk-adjusted therapy of acute lymphoblastic leukemia can decrease treatment burden and improve survival: treatment results of 2169 unselected pediatric and adolescent patients enrolled in the trial ALL-BFM 95. Blood, 111(9):4477-4489.

Tamehiro, N; Zhou, S; Okuhira, K; Benita, Y; Brown, C E; Zhuang, D Z; Latz, E; Hornemann, T; von Eckardstein, A; Xavier, R J; Freeman, M W; Fitzgerald, M L (2008). SPTLC1 binds ABCA1 to negatively regulate trafficking and cholesterol efflux activity of the transporter. Biochemistry, 47(23):6138-6147.

Crespan, M; Cancio, E; Spadari, S; Hübscher, U; Maga, G (2008). Selective targeting of the HIV-1 reverse transcriptase catalytic complex through interaction with the “primer grip” region by pyrrolobenzoxazepinone non-nucleoside inhibitors correlates with increased activity towards drug-resistant mutants. Biochemical Pharmacology, 76(2):156-168.

Seidel, F; Schläpfer, D; Nieke, J; Itten, K I (2008). Sensor performance requirements for the retrieval of atmospheric aerosols by airborne optical remote sensing. Sensors, 8(3):1902-1914.

Bluteau, G; Luder, H U; De Bari, C; Mitsiadis, T A (2008). Stem cells for tooth engineering. European Cells and Materials, 16:1-9.

Hayama, T; Baldridge, K K; Wu, Y T; Linden, Anthony; Siegel, J S (2008). Steric isotope effects gauged by the bowl-inversion barrier in selectively deuterated pentaarylcorannulenes. Journal of the American Chemical Society, 130(5):1583-1591.

Lavery, G G; Walker, E A; Tiganescu, A; Ride, J P; Shackleton, C H L; Tomlinson, J W; Connell, J M C; Ray, D W; Biason-Lauber, A; Malunowicz, E M; Arlt, W; Stewart, P M (2008). Steroid biomarkers and genetic studies reveal inactivating mutations in hexose-6-phosphate dehydrogenase in patients with cortisone reductase deficiency. Journal of Clinical Endocrinology and Metabolism, 93(10):3827-3832.

Cinquemani, Eugenio; Milias-Argeitis, Andreas; Summers, Sean; Lygeros, John (2008). Stochastic dynamics of genetic networks: modelling and parameter identification. Bioinformatics, 24(23):2748-2754.

Buehler, P W; Vallelian, F; Mikolajczyk, M G; Schoedon, G; Schweizer, T; Alayash, A I; Schaer, D J (2008). Structural stabilization in tetrameric or polymeric hemoglobin determines its interaction with endogenous antioxidant scavenger pathways. Antioxidants and Redox Signaling, 10(8):1449-1462.

Brun, K A; Linden, Anthony; Heimgartner, H (2008). Synthesis and conformational analysis of pentapeptides containing enantiomerically pure 2,2-disubstituted glycines. Helvetica Chimica Acta, 91(3):526-558.

Jasiński, M; Mlostoń, Grzegorz; Linden, Anthony; Heimgartner, H (2008). Synthesis and selected transformations of 1H-imidazole 3-oxides derived from amino acid esters. Helvetica Chimica Acta, 91(10):1916-1933.

Collin, M P; Hobbie, S N; Böttger, E C; Vasella, A (2008). Synthesis of 1,2,3-triazole analogues of lincomycin. Helvetica Chimica Acta, 91(10):1838-1848.

Mlostoń, Grzegorz; Mucha, P; Urbaniak, K; Broda, K; Heimgartner, H (2008). Synthesis of optically active 1-(1-phenylethyl)imidazoles eerived from 1-phenylethylamine. Helvetica Chimica Acta, 91(2):232-238.

Basu Baul, T S; Mizar, A; Chandra, A K; Song, X; Eng, G; Jurasko, R; Holcapek, M; De Vos, D; Linden, Anthony (2008). Synthesis, crystal structures, cytotoxicity and qualitative structure–activity relationship (QSAR) of cis-bis{5-[(E)-2-(aryl)-1-diazenyl]quinolinolato}di-n-butyltin(IV) complexes, nBu2Sn(L)2. Journal of Inorganic Biochemistry, 102(9):1719-1730.

Gurer, C; Strowig, T; Brilot, F; Pack, M; Trumpfheller, C; Arrey, F; Park, C G; Steinman, R M; Münz, C (2008). Targeting the nuclear antigen 1 of Epstein-Barr virus to the human endocytic receptor DEC-205 stimulates protective T-cell responses. Blood, 112(4):1231-1239.

Oehler-Jänne, C; von Bueren, A O; Vuong, V; Hollenstein, A; Grotzer, M A; Pruschy, M (2008). Temperature sensitivity of phospho-Ser(473)-PKB/AKT. Biochemical and Biophysical Research Communications (BBRC), 375(3):399-404.

Thöny, B; Calvo, A C; Scherer, T; Svebak, R M; Haavik, J; Blau, N; Martinez, A (2008). Tetrahydrobiopterin shows chaperone activity for tyrosine hydroxylase. Journal of Neurochemistry, 106(2):672-681.

Mittermann, I; Reininger, R; Zimmermann, Maya; Gangl, K; Reisinger, J; Aichberger, K J; Greisenegger, E K; Niederberger, V; Seipelt, J; Bohle, B; Kopp, T; Akdis, C A; Spitzauer, S; Valent, P; Valenta, R (2008). The IgE-reactive autoantigen Hom s 2 induces damage of respiratory epithelial cells and keratinocytes via induction of IFN-gamma. Journal of Investigative Dermatology, 128(6):1451-1459.

Budzowski, A; Linden, Anthony; Heimgartner, H (2008). The azirine/oxazolone approach to the synthesis of Aib-Pro endothiopeptides. Helvetica Chimica Acta, 91(8):1471-1488.

Baroux, C; Autran, D; Gillmor, C S; Grimanelli, D; Grossniklaus, U (2008). The maternal to zygotic transition in animals and plants. Cold Spring Harbor Symposia on Quantitative Biology, 73:89-100.

Tokarska-Schlattner, M; Boissan, M; Munier, A; Borot, C; Mailleau, C; Speer, O; Schlattner, U; Lacombe, M L (2008). The nucleoside diphosphate kinase D (NM23-H4) binds the inner mitochondrial membrane with high affinity to cardiolipin and couples nucleotide transfer with respiration. Journal of Biological Chemistry, 283(38):26198-26207.

Gaechter, V; Schraner, E M; Willi, P; Hehl, A B (2008). The single dynamin family protein in the primitive protozoan Giardia lamblia is essential for stage conversion and endocytic transport. Traffic, 9(1):57-71.

Auer, Jörg A; Fürst, Anton (2008). The use of clinical patients as animal models in musculoskeletal research. European Cells and Materials, 16(Suppl.):33.

Jüngst, C; Sreejayan, N; Zündt, B; Müller, I; Spelsberg, F W; Hüttl, T P; Kullak-Ublick, G A; del Pozo, R; Jüngst, D; von Ritter, C (2008). Ursodeoxycholic acid reduces lipid peroxidation and mucin secretagogue activity in gallbladder bile of patients with cholesterol gallstones. European Journal of Clinical Investigation, 38(9):634-639.

Johannsen, S; Paulus, S; Düpre, N; Müller, J; Sigel, Roland K O (2008). Using in vitro transcription to construct scaffolds for one-dimensional arrays of mercuric ions. Journal of Inorganic Biochemistry, 102(5/6):1141-1151.

Grieshaber, D; de Lange, V; Hirt, T; Lu, Z; Vörös, J (2008). Vesicles for signal amplification in a biosensor for the detection of low antigen concentrations. Sensors, 8(12):7894-7903.

2007

Hülsmeier, A J; Paesold-Burda, P; Hennet, T (2007). N-glycosylation site occupancy in serum glycoproteins using multiple reaction monitoring liquid chromatography-mass spectrometry. Molecular & Cellular Proteomics, 6(12):2132-2138.

Tweedie-Cullen, R Y; Wollscheid, B; Livingstone-Zatchej, M; Mansuy, I M (2007). Neuroproteomics and the detection of regulatory phosphosites. Current Proteomics, 4(4):209-222.

Baginsky, S; Grossmann, J; Gruissem, W (2007). Proteome analysis of chloroplast mRNA processing and degradation. Journal of Proteome Research, 6(2):809-820.

Hillger, Frank; Nettels, Daniel; Dorsch, Simone; Schuler, Benjamin (2007). Detection and Analysis of Protein Aggregation with Confocal Single Molecule Fluorescence Spectroscopy. Journal of Fluorescence, 17(6):759-765.

Gopal, E; Umapathy, N S; Martin, P M; Ananth, S; Gnana-Prakasam, J P; Becker, H; Wagner, C A; Ganapathy, V; Prasad, P D (2007). Cloning and functional characterization of human SMCT2 (SLC5A12) and expression pattern of the transporter in kidney. Biochimica et Biophysica Acta, 1768(11):2690-2697.

Maillard, O; Camenisch, U; Clement, F C; Blagoev, K (2007). DNA repair triggered by sensors of helical dynamics. Trends in Biochemical Sciences, 32(11):494-499.

Hostettler, N; Naggi, A; Torri, G; Ishai-Michaeli, R; Casu, B; Vlodavsky, I; Borsig, L (2007). P-selectin- and heparanase-dependent antimetastatic activity of non-anticoagulant heparins. FASEB Journal, 21(13):3562-3572.

Medina-Molner, Alfredo; Blacque, Olivier; Spingler, Bernhard (2007). The synthesis of 1,2-bis(1,5,9-triazacyclododecyl)ethane: A showcase for the importance of the linker length within bis(alkylating) reagents. Organic Letters, 9(23):4829-4831.

Handschin, Christoph; Chin, Sherry; Li, Ping; Liu, Fenfen; Maratos-Flier, Eleftheria; Lebrasseur, Nathan K; Yan, Zhen; Spiegelman, Bruce M (2007). Skeletal muscle fiber-type switching, exercise intolerance, and myopathy in PGC-1alpha muscle-specific knock-out animals. Journal of Biological Chemistry, 282(41):30014-30021.

Seeber, M; Cecchini, M; Rao, F; Settanni, G; Caflisch, A (2007). Wordom: a program for efficient analysis of molecular dynamics simulations. Bioinformatics, 23(19):2625-2627.

Bergmüller, E; Gehrig, P M; Gruissem, W (2007). Characterization of post-translational modifications of histone H2B-variants isolated from Arabidopsis thaliana. Journal of Proteome Research, 6(9):3655-3668.

Campagna, Maurizio; Trzoss, Michael; Bienz, Stefan (2007). More than a protective group: synthesis and applications of a new chiral silane. Organic Letters, 9(19):3793-3796.

Aguzzi, A (2007). Prion biology: the quest for the test. Nature Methods, 4(8):614-616.

Tuerk, R D; Thali, R F; Auchli, Y; Rechsteiner, H; Brunisholz, R A; Schlattner, U; Wallimann, T; Neumann, D (2007). New candidate targets of AMP-activated protein kinase in murine brain revealed by a novel multidimensional substrate-screen for protein kinases. Journal of Proteome Research, 6(8):3266-3277.

Braun, O; Knipp, M; Chesnov, S; Vasák, M (2007). Specific reactions of S-nitrosothiols with cysteine hydrolases: A comparative study between dimethylargininase-1 and CTP synthetase. Protein Science, 16(8):1522-1534.

Santangelo, Maria Grazia; Medina-Molner, Alfredo; Schweiger, Arthur; Mitrikas, George; Spingler, Bernhard (2007). Structural analysis of Cu(II) ligation to the 5'-GMP nucleotide by pulse EPR spectroscopy. Journal of Biological Inorganic Chemistry, 12(6):767-775.

Ferreira, T C; Hertzberg, L; Gassmann, M; Campos, E G (2007). The yeast genome may harbor hypoxia response elements (HRE). Comparative Biochemistry and Physiology - Part C: Toxicology & Pharmacology, 146(1-2):255-263.

Krautz-Peterson, G; Camargo, S; Huggel, K; Verrey, F; Shoemaker, C B; Skelly, P J (2007). Amino acid transport in schistosomes: Characterization of the permeaseheavy chain SPRM1hc. Journal of Biological Chemistry, 282(30):21767-21775.

Potthast, F; Gerrits, B; Häkkinen, J; Rutishauser, D; Ahrens, C H; Roschitzki, B; Baerenfaller, K; Munton, R P; Walther, P; Gehrig, P; Seif, P; Seeberger, P H; Schlapbach, R (2007). The Mass Distance Fingerprint: a statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry. Journal of Chromatography B, 854(1-2):173-182.

Bogdanova, A; Mihov, D; Lutz, H; Saam, B; Gassmann, M; Vogel, J (2007). Enhanced erythro-phagocytosis in polycythemic mice overexpressing erythropoietin. Blood, 110(2):762-769.

Gemperli, A C; Schaffitzel, C; Jakob, C; Steuber, J (2007). Transport of Na+ and K+ by an antiporter-related subunit from the Escherichia coli NADH dehydrogenase I produced in Saccharomyces cerevisiae. Archives of Microbiology, 188(5):509-521.

Selle, A; Ullrich, O; Harnacke, K; Hass, R (2007). Retrodifferentiation and rejuvenation of senescent monocytic cells requires PARP-1. Experimental Gerontology, 42(6):554-562.

Steele, A D; Lindquist, S; Aguzzi, A (2007). The prion protein knockout mouse: a phenotype under challenge. Prion, 1(2):83-93.

Bovet, C; Wortmann, A; Eiler, S; Granger, F; Ruff, M; Gerrits, B; Moras, D; Zenobi, R (2007). Estrogen receptor-ligand complexes measured by chip-based nanoelectrospray mass spectrometry: an approach for the screening of endocrine disruptors. Protein Science, 16(5):938-946.

Borsig, L; Wang, L; Cavalcante, M C M; Cardilo-Reis, L; Ferreira, P L; Mourão, P A S; Esko, J D; Pavão, M S G (2007). Selectin blocking activity of a fucosylated chondroitin sulfate glycosaminoglycan from sea cucumber. Effect on tumor metastasis and neutrophil recruitment. Journal of Biological Chemistry, 282(20):14984-14991.

Maillet, I; Berndt, P; Malo, C; Rodriguez, S; Brunisholz, R A; Pragai, Z; Arnold, S; Langen, H; Wyss, M (2007). From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Proteomics, 7(7):1097-1106.

Woelk, Tanja; Sigismund, Sara; Penengo, Lorenza; Polo, Simona (2007). The ubiquitination code: a signalling problem. Cell Division, 2:11.

Peroza, Estevão A; Freisinger, Eva (2007). Erratum: Metal ion binding properties of Triticum aestivum Ec-1 metallothionein: evidence supporting two separate metal thiolate clusters. Journal of Biological Inorganic Chemistry, 12(3):392.

Raschle, T; Arigoni, D; Brunisholz, R; Rechsteiner, H; Amrhein, N; Fitzpatrick, T B (2007). Reaction mechanism of pyridoxal 5'-phosphate synthase: detection of an enzyme-bound chromophoric intermediate. Journal of Biological Chemistry, 282(9):6098-6105.

Nazzaro, C; Rizzi, A; Salvadori, S; Guerrini, R; Regoli, D; Zeilhofer, Hanns Ulrich; Calo, G (2007). UFP-101 antagonizes the spinal antinociceptive effects of nociceptin/orphanin FQ: behavioral and electrophysiological studies in mice. Peptides, 28(3):663-669.

Erat, M C; Zerbe, O; Fox, T; Sigel, Roland K O (2007). Solution Structure of Domain 6 from a Self-Splicing Group II Intron Ribozyme: A Mg2+ Binding Site is Located Close to the Stacked Branch Adenosine. Chembiochem, 8(3):306-314.

Furrer, E M; Ronchetti, M F; Verrey, F; Pos, K M (2007). Functional characterization of a NapA Na(+)/H(+) antiporter from Thermus thermophilus. FEBS Letters, 581(3):572-578.

Mayer, D; Molawi, K; Martínez-Sobrido, L; Ghanem, A; Thomas, S; Baginsky, S; Grossmann, J; García-Sastre, A; Schwemmle, M (2007). Identification of cellular interaction partners of the influenza virus ribonucleoprotein complex and polymerase complex using proteomic-based approaches. Journal of Proteome Research, 6(2):672-682.

Ruiz-Sanchez, Pilar; Mundwiler, Stefan; Medina-Molner, Alfredo; Spingler, Bernhard; Alberto, Roger (2007). Iodination of cisplatin adduct of Vitamin B-12 {B-12}-CN-{cis-PtCl(NH3)(2)}](+). Journal of Organometallic Chemistry, 692(6):1358-1362.

Garcia, J; Callewaert, N; Borsig, L (2007). P-selectin mediates metastatic progression through binding to sulfatides on tumor cells. Glycobiology, 17(2):185-196.

Munton, R P; Tweedie-Cullen, R; Livingstone-Zatchej, M; Weinandy, F; Waidelich, M; Longo, D; Gehrig, P; Potthast, F; Rutishauser, D; Gerrits, B; Panse, C; Schlapbach, R; Mansuy, I M (2007). Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations. Molecular & Cellular Proteomics, 6(2):283-293.

Kromer, Lukas; Spingler, Bernhard; Alberto, Roger (2007). Synthesis and reactivity of ReBr2(NCCH3)(2)(CO)2](-): A new precursor for bioorganometallic chemistry. Journal of Organometallic Chemistry, 692(6):1372-1376.

Zeilhofer, Hanns Ulrich (2007). Prostanoids in nociception and pain. Biochemical Pharmacology, 73(2):165-174.

Savaskan, Nicolai E; Ufer, Christoph; Kühn, Hartmut; Borchert, Astrid (2007). Molecular biology of glutathione peroxidase 4: from genomic structure to developmental expression and neural function. Biological Chemistry, 388(10):1007-1017.

Souabni, Abdallah; Jochum, Wolfram; Busslinger, Meinrad (2007). Oncogenic role of Pax5 in the T-lymphoid lineage upon ectopic expression from the immunoglobulin heavy-chain locus. Blood, 109(1):281-289.

El-Andaloussi, N; Valovka, T; Toueille, M; Hassa, P O; Gehrig, P; Covic, M; Hübscher, U; Hottiger, M O (2007). Methylation of DNA polymerase beta by protein arginine methyltransferase 1 regulates its binding to proliferating cell nuclear antigen. FASEB Journal, 21(1):26-34.

Schulz-Baldes, Annette; Vayena, Effy; Biller-Andorno, Nikola (2007). Sharing benefits in international health research. Research-capacity building as an example of an indirect collective benefit. EMBO Reports, 8(1):8-13.

Egli, D H; Linden, Anthony; Heimgartner, H (2007). 1,5-Dipolar electrocyclizations of Thiocarbonyl Ylides bearing C=N groups: Reactions of N-[(Dimethylamino)methylene]thiobenzamide and 2-(Dimethylhydrazono)-1-phenylethane-1-thione with Diazo compounds. Helvetica Chimica Acta, 90(1):86-100.

Mlostoń, Grzegorz; Woźnicka, M; Heimgartner, H (2007). 5-Morpholino-1,2,3,4-thiatriazole as a Sulfur-Transfer reagent in the reactions with Thioketones. Helvetica Chimica Acta, 90(3):594-600.

Clauss, Marcus; Schwarm, A; Ortmann, S; Streich, W J; Hummel, J (2007). A case of non-scaling in mammalian physiology? Body size, digestive capacity, food intake, and ingesta passage in mammalian herbivores. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 148(2):249-265.

Robinson, Mark D; Speed, Terence P (2007). A comparison of Affymetrix gene expression arrays. BMC Bioinformatics, 8:449.

Nieke, J; Reusen, I (2007). A new method to retrieve the data requirements of the remote sensing community – exemplarily demonstrated for hyperspectral user NEEDS. Sensors, 7(8):1545-1558.

Schlosser, E; Otero, C; Wuensch, C; Kessler, B; Edelmann, M; Brunisholz, R; Drexler, I; Legler, D F; Groettrup, M (2007). A novel cytosolic class I antigen-processing pathway for endoplasmic-reticulum-targeted proteins. EMBO Reports, 8(10):945-51.

Dutzler, R (2007). A structural perspective on ClC channel and transporter function. FEBS letters, 581(15):2839-44.

Grossmann, J; Fischer, B; Baerenfaller, K; Owiti, J; Buhmann, J M; Gruissem, W; Baginsky, S (2007). A workflow to increase the detection rate of proteins from unsequenced organisms in high-throughput proteomics experiments. Proteomics, 7(23):4245-4254.

Hetzler, B E; Ondracek, J M (2007). Baclofen alters flash-evoked potentials in Long-Evans rats. Pharmacology Biochemistry and Behavior, 84(4):727-740.

Nicolas, O; Gavín, R; Braun, N; Ureña, J M; Fontana, X; Soriano, E; Aguzzi, A; del Río, J A (2007). Bcl-2 overexpression delays caspase-3 activation and rescues cerebellar degeneration in prion-deficient mice that overexpress amino-terminally truncated prion. FASEB Journal, 21(12):3107-3117.

Cannavo, E; Gerrits, B; Marra, Giancarlo; Schlapbach, R; Jiricny, J (2007). Characterization of the interactome of the human MutL homologues MLH1, PMS1, and PMS. Journal of Biological Chemistry, 282(5):2976-2986.

Camici, G G; Stallmach, T; Hermann, M; Hassink, R; Doevendans, P; Grenacher, B; Hirschy, A; Vogel, J; Lüscher, T F; Ruschitzka, F; Gassmann, M (2007). Constitutively overexpressed erythropoietin reduces infarct size in a mouse model of permanent coronary artery ligation. Methods in Enzymology, 435:147-155.

Becskei, A; Grusby, M J (2007). Contribution of IL-12R mediated feedback loop to Th1 cell differentiation. FEBS Letters, 581(27):5199-5206.

Clauss, Marcus; Besselmann, Dorothea; Schwarm, A; Ortmann, Sylvia; Hatt, Jean-Michel (2007). Demonstrating coprophagy with passage markers? The example of the plains viscacha (Lagostomus maximus). Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 147(2):453-459.

Schulte, R F; Henning, A; Tsao, J; Boesiger, P; Pruessmann, K P (2007). Design of broadband RF pulses with polynomial-phase response. Journal of Magnetic Resonance, 186(2):167-175.

Wirthner, R; Balamurugan, K; Stiehl, D P; Barth, S; Spielmann, P; Oehme, F; Flamme, I; Katschinski, D M; Wenger, R H; Camenisch, G (2007). Determination and modulation of prolyl-4-hydroxylase domain oxygen sensor activity. Methods in Enzymology, 435:43-60.

Taylor, R C; Brumatti, G; Ito, S; Hengartner, M O; Derry, W B; Martin, S J (2007). Establishing a blueprint for CED-3-dependent killing through identification of multiple substrates for this protease. Journal of Biological Chemistry, 282(20):15011-15021.

Stoop, R; Jasa, T; Uwate, Y; Martignoli, S (2007). From hearing to listening: design and properties of an actively tunable electronic hearing sensor. Sensors, 7(12):3287-3298.

Bijnsdorp, I V; Schwendener, R; Schott, H; Fichtner, I; Smid, K; Schott, S; Laan, A C; Peters, G J (2007). In vivo and in vitro activity and mechanism of action of the multidrug cytarabine-L-glycerylyl-fluorodeoxyuridine. Nucleosides, Nucleotides and Nucleic Acids, 26(10-12):1619-1624.

Hornemann, Thorsten; Wei, Yu; von Eckardstein, Arnold (2007). Is the mammalian serine palmitoyltransferase a high-molecular-mass complex? Biochemical Journal, 405(1):157-164.

Lombardot, Thierry; Kottmann, Renzo; Giuliani, Gregory; de Bono, Andrea; Addor, Nans; Glöckner, Frank O (2007). MetaLook: a 3D visualisation software for marine ecological genomics. BMC Bioinformatics, 8:406.

Peroza, Estevão A; Freisinger, Eva (2007). Metal ion binding properties of Tricium aestivum Ec-1 metallothionein: evidence supporting two separate metal thiolate clusters. Journal of Biological Inorganic Chemistry, 12(3):377-391.

Sandrock, C; Frauenfelder, N; Von Burg, S; Vorburger, C (2007). Microsatellite DNA markers for the aphid parasitoid Lysiphlebus fabarum and their applicability to related species. Molecular Ecology, 7(6):1080-1083.

Lempp, Thomas J; Suormala, Terttu; Siegenthaler, Renate; Baumgartner, E Regula; Fowler, Brian; Steinmann, Beat; Baumgartner, Matthias R (2007). Mutation and biochemical analysis of 19 probands with mut0 and 13 with mut− methylmalonic aciduria: Identification of seven novel mutations. Molecular Genetics and Metabolism, 90(3):284-290.

Köditz, J; Nesper, J; Wottawa, M; Stiehl, D P; Camenisch, G; Franke, C; Myllyharju, J; Wenger, R H; Katschinski, D M (2007). Oxygen-dependent ATF-4 stability is mediated by the PHD3 oxygen sensor. Blood, 110(10):3610-3617.

Hönig, Manfred; Albert, Michael H; Schulz, Ansgar; et al; Güngör, Tayfun (2007). Patients with adenosine deaminase deficiency surviving after hematopoietic stem cell transplantation are at high risk of CNS complications. Blood, 109(8):3595-3602.

Roos, F F; Jacob, R; Grossmann, J; Fischer, B; Buhmann, J M; Gruissem, W; Baginsky, S; Widmayer, P (2007). PepSplice: cache-efficient search algorithms for comprehensive identification of tandem mass spectra. Bioinformatics, 23(22):3016-3023.

Sigurdson, Christina J; Nilsson, K Peter R; Hornemann, Simone; Manco, Giuseppe; Polymenidou, Magdalini; Schwarz, Petra; Leclerc, Mario; Hammarström, Per; Wüthrich, Kurt; Aguzzi, Adriano (2007). Prion strain discrimination using luminescent conjugated polymers. Nature Methods, 4(12):1023-1030.

Sieber-Ruckstuhl, Nadja S; Meli, Marina L; Boretti, Felicitas S; Gönczi, Enikö; Lutz, Hans; Reusch, Claudia E (2007). Quantitative real-time PCR for the measurement of 11beta-HSD1 and 11beta-HSD2 mRNA levels in tissues of healthy dogs. Hormone and metabolic research, 39(8):548-554.

Teh, Kevin; de Zanche, Nicola; Wild, Jim M (2007). Radiation-damping effects in a birdcage resonator with hyperpolarised 3He gas NMR at 1.5T. Journal of Magnetic Resonance, 185(1):164-172.

Rajendran, L; Le Lay, S; Illges, H (2007). Raft association and lipid droplet targeting of flotillins are independent of caveolin. Biological Chemistry, 388(3):307-314.

Mlostoń, Grzegorz; Warkentin, J; Linden, Anthony; Heimgartner, H (2007). Reactions of dimethoxycarbene with N-tosylated imines. Helvetica Chimica Acta, 90(10):2024-2036.

Romański, J; Mlostoń, Grzegorz; Heimgartner, H (2007). Reactions of polycyclic ketones with Dimethoxycarbene; a convenient route for a one-pot preparation of some alpha-hydroxycarboxylic acid esters. Helvetica Chimica Acta, 90(7):1279-1288.

Nytko, K J; Spielmann, P; Camenisch, G; Wenger, R H; Stiehl, D P (2007). Regulated Function of the Prolyl-4-Hydroxylase Domain (PHD) Oxygen Sensor Proteins. Antioxidants & Redox Signaling, 9(9):1329-1338.

Bodenmiller, Bernd; Mueller, Lukas N; Mueller, Markus; Domon, Bruno; Aebersold, Ruedi (2007). Reproducible isolation of distinct, overlapping segments of the phosphoproteome. Nature Methods, 4(3):231-237.

Sommen, G L; Linden, Anthony; Heimgartner, H (2007). Selenium-Containing Heterocycles From Isoselenocyanates: Synthesis of Ethyl 4-Oxo-2-amino-4,5-dihydroselenophene-3-carboxylates. Letters in Organic Chemistry, 4(1):7-12.

Sommen, G L; Linden, Anthony; Heimgartner, H (2007). Selenium-Containing heterocycles from isoselenocyanates: synthesis of 5-Amino-2,4-dihydro-3H-1,2,4-triazole-3-selones. Helvetica Chimica Acta, 90(4):641-651.

Sommen, G L; Linden, Anthony; Heimgartner, H (2007). Selenium-containing heterocycles from Isoselenocyanates: Synthesis of 1,3-Selenazinane and 1,3-Selenazinanone derivatives. Helvetica Chimica Acta, 90(3):472-487.

Sommen, G L; Linden, Anthony; Heimgartner, H (2007). Selenium-containing heterocycles from isoselenocyanates: Base-catalyzed reaction of malononitrile with phenyl isoselenocyanate and bromoacetonitrile or alpha-halogenated ketones. Helvetica Chimica Acta, 90(10):1849-1855.

Mueller, Lukas N; Rinner, Oliver; Schmidt, Alexander; Letarte, Simon; Bodenmiller, Bernd; Brusniak, Mi-Youn; Vitek, Olga; Aebersold, Ruedi; Müller, Markus (2007). SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling. Proteomics, 7(19):3470-3480.

Jasiński, M; Mlostoń, Grzegorz; Mucha, P; Linden, Anthony; Heimgartner, H (2007). Synthesis of new Bis-imidazole derivatives. Helvetica Chimica Acta, 90(9):1765-1780.

Altherr, W; Linden, Anthony; Heimgartner, H (2007). The 'Azirine/Oxazolone Method' in peptaibol synthesis: preparation of a Dderivative of trichotoxin A-50 (G). Chemistry & Biodiversity, 4:1144-1169.

Mlostoń, Grzegorz; Heimgartner, H (2007). The first reaction of Dimethoxycarbene with an imine moiety. Helvetica Chimica Acta, 90(9):1758-1764.

Nikolaev, V V; Linden, Anthony; Heimgartner, H (2007). Thermolysis of imidates: A new method for the generation of carbonyl ylides. Helvetica Chimica Acta, 90(12):2330-2341.

Camenisch, U; Dip, R; Vitanescu, M; Naegeli, H (2007). Xeroderma pigmentosum complementation group A protein is driven to nucleotide excision repair sites by the electrostatic potential of distorted DNA. DNA Repair, 6(12):1819-1828.

2006

David, D C; Ittner, L M; Gehrig, P; Nergenau, D; Shepherd, C; Halliday, G; Götz, J (2006). Beta-amyloid treatment of two complementary P301L tau-expressing Alzheimer's disease models reveals similar deregulated cellular processes. Proteomics, 6(24):6566-6577.

Cai, H; Gehrig, P; Scott, T M; Zimmermann, R; Schlapbach, R; Zisch, A H (2006). MnSOD marks cord blood late outgrowth endothelial cells and accompanies robust resistance to oxidative stress. Biochemical and Biophysical Research Communications (BBRC), 350(2):364-369.

Rexhepaj, R; Grahammer, F; Völkl, H; Remy, C; Wagner, C A; Sandulache, D; Artunc, F; Henke, G; Nammi, S; Capasso, G; Alessi, D R; Lang, F (2006). Reduced intestinal and renal amino acid transport in PDK1 hypomorphic mice. FASEB Journal, 20(13):2214-2222.

Maria, Leonor; Paulo, Antonio; Santos, Isabel C; Santos, Isabel; Kurz, Philipp; Spingler, Bernhard; Alberto, Roger (2006). Very small and soft scorpionates: Water stable technetium tricarbonyl complexes combining a bis-agostic (k(3)-H, H, S) binding motif with pendant and integrated bioactive molecules. Journal of the American Chemical Society, 128(45):14590-14598.

Pahlich, S; Zakaryan, R P; Gehring, H (2006). Protein arginine methylation: Cellular functions and methods of analysis. Biochimica et Biophysica Acta, 1764(12):1890-1903.

Germano, Serena; Barberis, Davide; Santoro, Massimo M; Penengo, Lorenza; Citri, Ami; Yarden, Yosef; Gaudino, Giovanni (2006). Geldanamycins trigger a novel Ron degradative pathway, hampering oncogenic signaling. Journal of Biological Chemistry, 281(31):21710-21719.

Virkki, L V; Murer, H; Forster, I C (2006). Mapping conformational changes of a type IIb Na+/Pi cotransporter by voltage clamp fluorometry. Journal of Biological Chemistry, 281(39):28837-28849.

Fischer, B; Grossmann, J; Roth, V; Gruissem, W; Baginsky, S; Buhmann, J M (2006). Semi-supervised LC/MS alignment for differential proteomics. Bioinformatics, 22(14):e132-40.

Silacci, M; Brack, S S; Späth, N; Buck, A; Hillinger, S; Arni, S; Weder, W; Zardi, Luciano; Nerdi, D (2006). Human monoclonal antibodies to domain C of tenascin-C selectively target solid tumors in vivo. Protein Engineering, Design & Selection, 19(10):471-478.

Blenn, C; Althaus, F R; Malanga, M (2006). Poly(ADP-ribose) glycohydrolase silencing protects against H2O2-induced cell death. Biochemical Journal, 396(3):419-429.

Frech, C M; Ben-David, Y; Weiner, L; Milstein, D (2006). Metal-controlled reactivity of a pincer-type, sigma-coordinated naphthyl radical anion. Journal of the American Chemical Society, 128(22):7128-7129.

Aguzzi, A (2006). Prion diseases of humans and farm animals: epidemiology, genetics, and pathogenesis. Journal of Neurochemistry, 97(6):1726-1739.

Maga, G; Amacker, M; Hübscher, U; Gosselin, G; Imbach, J L; Mathé, C; Faraj, A; Sommadossi, J P; Spadari, S (2006). Structural determinants of HIV-1 reverse transcriptase stereoselectivity towards (beta)-L-deoxy- and dideoxy-pyrimidine nucleoside triphosphates: molecular basis for the combination of L-dideoxynucleoside analogs with non-nucleoside inhibitors in anti HIV chemotherapy. Nucleosides, Nucleotides and Nucleic Acids, 18(4-5):795-805.

Amstutz, Patrick; Koch, Holger; Binz, H Kaspar; Deuber, Stefan A; Plückthun, Andreas (2006). Rapid selection of specific MAP kinase-binders from designed ankyrin repeat protein libraries. Protein Engineering, Design & Selection, 19(5):219-229.

Dutt, Shilpee; Kléber, Maurice; Matasci, Mattia; Sommer, Lukas; Zimmermann, Dieter R (2006). Versican V0 and V1 guide migratory neural crest cells. Journal of Biological Chemistry, 281(17):12123-12131.

Knobloch, B; Sigel, Helmut; Okruszek, A; Sigel, Roland K O (2006). Acid–base properties of the nucleic-acid model 2′-deoxyguanylyl(5′→3′)-2′-deoxy-5′-guanylate, d(pGpG)3–, and of related guanine derivatives. Organic & Biomolecular Chemistry, 4(6):1085-1090.

Eiholzer, U; l'Allemand, D; Rousson, V; Schlumpf, M; Gasser, T; Girard, J; Grüters, A; Simoni, M (2006). Hypothalamic and gonadal components of hypogonadism in boys with Prader-Labhart-Willi syndrome. Journal of Clinical Endocrinology and Metabolism, 91(3):892-898.

Cramer, Mirjam; Nagy, Ivana; Murphy, Brian J; Gassmann, Max; Hottiger, Michael O; Georgiev, Oleg; Schaffner, Walter (2006). NF-κB contributes to transcription of placenta growth factor and interacts with metal responsive transcription factor-1 in hypoxic human cells. Biological Chemistry, 387(1):113.

Baici, Antonio; Müntener, Kathrin; Willimann, Anna; Zwicky, Roman (2006). Regulation of human cathepsin B by alternative mRNA splicing: homeostasis, fatal errors and cell death. Biological Chemistry, 387(8):1017-1021.

Egli, D H; Linden, Anthony; Heimgartner, H (2006). 1,5-Dipolar electrocyclizations in reactions of alpha-Thioxo Ketones and alpha-Thioxo Thioamides with Diazo compounds. Helvetica Chimica Acta, 89(9):1910-1926.

Iliev, Boyan; Linden, Anthony; Kunz, Roland; Heimgartner, Heinz (2006). 14-Membered cyclodepsipeptides with alternating beta-hydroxy and alpha-amino acids by cyclodimerization. Tetrahedron, 62(6):1079-1094.

Hobbie, S N; Bruell, C; Kalapala, S; Akshay, S; Schmidt, S; Pfister, P; Böttger, E C (2006). A genetic model to investigate drug-target interactions at the ribosomal decoding site. Biochimie, 88(8):1033-1043.

Hajioff, D; Hegemann, S; Beck, M; Conti, G; Sunder-Plassmann, G; Widmer, U; Mehta, A; Keilmann, A (2006). Agalsidase alpha and hearing in fabry disease: data from the fabry outcome surve. European Journal of Clinical Investigation, 36(9):663-667.

Schild, A; Ittner, L M; Götz, J (2006). Altered phosphorylation of cytoskeletal proteins in mutant protein phosphatase 2A transgenic mice. Biochemical and Biophysical Research Communications (BBRC), 343(4):1171-1178.

Carmona-Saez, P; Pascual-Marqui, R D; Tirado, F; Carazo, J M; Pascual-Montano, A (2006). Biclustering of gene expression data by Non-smooth Non-negative Matrix Factorization. BMC Bioinformatics, 7:78.

Baerenfaller, K; Fischer, F; Jiricny, J (2006). Characterization of the "mismatch repairosome" and its role in the processing of modified nucleosides in vitro. Methods in Enzymology, 408:285-303.

Loupatty, Ference J; van der Steen, Annemarie; IJlst, Lodewijk; Ruiter, Jos P N; Ofman, Rob; Baumgartner, Matthias R; et al (2006). Clinical, biochemical, and molecular findings in three patients with 3-hydroxyisobutyric aciduria. Molecular Genetics and Metabolism, 87(3):243-248.

Steffel, J; Akhmedov, A; Fahndrich, C; Ruschitzka, F; Lüscher, Thomas F; Tanner, F C (2006). Differential effect of celecoxib on tissue factor expression in human endothelial and vascular smooth muscle cells. Biochemical and Biophysical Research Communications (BBRC), 349(2):597-603.

Park, Jung Mee; Laio, Alessandro; Iannuzzi, Marcella; Parrinello, Michele (2006). Dissociation Mechanism of Acetic Acid in Water. Journal of the American Chemical Society, 128(35):11318-11319.

Liu, J; Mohammed, J; Carter, J; Ranka, S; Kahveci, T; Baudis, Michael (2006). Distance-based clustering of CGH data. Bioinformatics, 22(16):1971-1978.

Nikolaev, Vsevolod; Hennig, Lothar; Heimgartner, Heinz; Schulze, Bärbel; Nikolaev, Valerij (2006). Dual reactivity of imidic carbonyl ylides in Rh(II)-catalyzed reactions of alpha-diazocarbonyl compounds with succinimide. Tetrahedron Letters, 47(15):2643-2647.

Nesvizhskii, A I; Roos, F F; Grossmann, J; Vogelzang, M; Eddes, J S; Gruissem, W; Baginsky, S; Aebersold, R (2006). Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides. Molecular and Cellular Proteomics, 5(4):652-670.

Schreiner, B; Voss, J; Wischhusen, J; Dombrowski, Y; Steinle, A; Lochmüller, H; Dalakas, M; Melms, A; Wiendl, H (2006). Expression of toll-like receptors by human muscle cells in vitro and in vivo: TLR3 is highly expressed in inflammatory and HIV myopathies, mediates IL-8 release and up-regulation of NKG2D-ligands. FASEB Journal, 20(1):118-120.

Hegemann, S; Hajioff, D; Conti, G; Beck, M; Sunder-Plassmann, G; Widmer, U; Mehta, A; Keilmann, A (2006). Hearing loss in Fabry disease: data from the Fabry Outcome Survey. European Journal of Clinical Investigation, 36(9):654-662.

Stiehl, D P; Wirthner, R; Köditz, J; Spielmann, P; Camenisch, G; Wenger, R H (2006). Increased prolyl 4-hydroxylase domain proteins compensate for decreased oxygen levels. Evidence for an autoregulatory oxygen-sensing system. Journal of Biological Chemistry, 281(33):23482-23491.

Stamm, S; Heimgartner, H (2006). Introduction of the Aib-Pro unit into peptides by means of the ‘azirine/oxazolone method’ on solid phase. Tetrahedron, 62(41):9671-9680.

Wirtz, P H; von Känel, R; Mohiyeddini, C; Emini, L; Ruedisueli, K; Groessbauer, S; Ehlert, Ulrike (2006). Low social support and poor emotional regulation are associated with increased stress hormone reactivity to mental stress in systemic hypertension. Journal of Clinical Endocrinology and Metabolism, 91(10):3857-65.

Liberi, G; Cotta-Ramusino, C; Lopes, Massimo; Sogo, J; Conti, C; Bensimon, A; Foiani, M (2006). Methods to study replication fork collapse in budding yeast. Methods in Enzymology, 409:442-62.

Stamm, S; Heimgartner, H (2006). Novel N-(2,2-Dimethyl-2H-azirin-3-yl)-L-prolinates as Aib-Pro Synthons. Helvetica Chimica Acta, 89(9):1841-1855.

Lesniak, S; Mloston, G; Urbaniak, K; Wasiak, P; Linden, Anthony; Heimgartner, H (2006). Phosphonylated thiocarbonyl ylides from the reaction of aromatic thioketones with diethyl diazomethylphosphonates. Tetrahedron, 62(33):7776-7782.

Nierop, Ada; Bratsikas, Aliki; Klinkenberg, Ariadne; Nater, Urs M; Zimmermann, Roland; Ehlert, Ulrike (2006). Prolonged salivary cortisol recovery in second-trimester pregnant women and attenuated salivary alpha-amylase responses to psychosocial stress in human pregnancy. Journal of Clinical Endocrinology and Metabolism, 91(4):1329-1335.

Feistritzer, Clemens; Schuepbach, Reto A; Mosnier, Laurent O; Bush, Leslie A; Di Cera, Enrico; Griffin, John H; Riewald, Matthias (2006). Protective signaling by activated protein C is mechanistically linked to protein C activation on endothelial cells. Journal of Biological Chemistry, 281(29):20077-20084.

Iliev, Boyan; Linden, Anthony; Heimgartner, Heinz (2006). Reaction of gamma-Hydroxy-N-[1-(dimethylcarbamoyl)ethyl]butanamides under the ‘Direct Amide Cyclization’ Conditions. Helvetica Chimica Acta, 89(1):153-175.

Mlostoń, Grzegorz; Jasiński, M; Linden, Anthony; Heimgartner, H (2006). Reactions of 2-unsubstituted 1H-Imidazole 3-Oxides with 2,2- Bis(trifluoromethyl)ethene-1,1-dicarbonitrile: A stepwise 1,3-dipolar Cycloaddition. Helvetica Chimica Acta, 89(7):1304-1316.

Majchrzak, A; Mlostoń, Grzegorz; Linden, Anthony; Heimgartner, H (2006). Reactions of Chlorosulfanyl Derivatives of Cyclobutanones with Different Nucleophiles. Helvetica Chimica Acta, 89(5):1042-1061.

Egli, D H; Linden, Anthony; Heimgartner, H (2006). Reactions of Thioketones possessing a conjugated C=C bond with Diazo compounds. Helvetica Chimica Acta, 89(12):3041-3055.

Egli, D H; Linden, Anthony; Heimgartner, H (2006). Reactions of alpha,beta-unsaturated Thioamides with Diazo compounds. Helvetica Chimica Acta, 89(11):2815-2824.

Fedorov, A; Fu, C; Heimgartner, H (2006). Regio- and stereoselectivity in the Lewis acid- and NaH-induced reactions of thiocamphor with (R)-2-vinyloxirane. Helvetica Chimica Acta, 89(3):456-467.

Ehlert, Ulrike; Erni, Katja; Hebisch, Gundula; Nater, Urs M (2006). Salivary α-amylase levels after yohimbine challenge in healthy men. Journal of Clinical Endocrinology and Metabolism, 91(12):5130-5133.

Sommen, G L; Linden, Anthony; Heimgartner, H (2006). Selenium-containing Heterocycles from Isoselenocyanates: Use of Hydrazine for the synthesis of 1,3,4-Selenadiazine derivatives. Helvetica Chimica Acta, 89(7):1322-1329.

Sommen, G L; Linden, Anthony; Heimgartner, H (2006). Selenium-containing heterocycles from isoselenocyanates: synthesis of 2-methylidene-1,3-selenazolidine derivatives. Tetrahedron, 62:3344-3354.

McCallum, N; Spehar, G; Bischoff, M; Berger-Bächi, B (2006). Strain dependence of the cell wall-damage induced stimulon in Staphylococcus aureus. Biochimica et Biophysica Acta, 1760(10):1475-1481.

Köttgen, P; Linden, Anthony; Heimgartner, H (2006). Synthesis of Enniatin-like Cyclic Depsipeptides via direct Amide Cyclization. Helvetica Chimica Acta, 89(4):731-746.

Hägele, S; Behnam, B; Borter, E; Wolfe, J; Paasch, U; Lukashev, D; Sitkovsky, M; Wenger, R H; Katschinski, D M (2006). TSGA10 prevents nuclear localization of the hypoxia-inducible factor (HIF)-1alpha. FEBS Letters, 580(15):3731-3738.

Mlostoń, Grzegorz; Heimgartner, H (2006). The first ring-enlargement of a 1-Azabicyclo[1.1.0]butane to a 1-Azabicyclo[2.1.1]hexane. Helvetica Chimica Acta, 89(3):442-449.

Stamm, Simon; Linden, Anthony; Heimgartner, Heinz (2006). The ‘Azirine/Oxazolone Method’ on solid phase: Introduction of various alpha,alpha-disubstituted alpha-Amino Acids. Helvetica Chimica Acta, 89(1):1-15.

Riedel, K; Carranza, P; Gehrig, P; Potthast, F; Eberl, L (2006). Towards the proteome of Burkholderia cenocepacia H111: setting up a 2-DE reference map. Proteomics, 6(1):207-216.

Iliev, Boyan; Verma, Sanjiv; Linden, Anthony; Heimgartner, Heinz (2006). Transformation of 5-Hydroxy- to (5-Chloropentanoyl)amino Derivatives under ‘Direct Amide Cyclization’ Conditions. Helvetica Chimica Acta, 89(2):352-359.

Tilley, S David; Francis, Matthew B (2006). Tyrosine-selective protein alkylation using π-allylpalladium complexes. Journal of the American Chemical Society, 128(4):1080-1081.

Pascual-Montano, A; Carmona-Saez, P; Chagoyen, M; Tirado, F; Carazo, J M; Pascual-Marqui, R D (2006). bioNMF: a versatile tool for non-negative matrix factorization in biology. BMC Bioinformatics, 7:366.

2005

Hassa, P O; et al (2005). Acetylation of poly(ADP-ribose) polymerase-1 by p300/CREB-binding protein regulates coactivation of NF-kappaB-dependent transcription. Journal of Biological Chemistry, 280(49):40450-40464.

Kilic, Ertugrul; Kilic, Ulkan; Soliz, Jorge; Bassetti, Claudio L; Gassmann, Max; Hermann, Dirk M (2005). Brain-derived erythropoietin protects from focal cerebral ischemia by dual activation of ERK-1/-2 and Akt pathways. FASEB Journal, 19(14):2026-2028.

Gingras, A C; Caballero, M; Zarske, M; Sanchez, Amy; Hazbun, T R; Fields, S; Sonenberg, N; Hafen, E; Raught, B; Aebersold, R (2005). A novel, evolutionarily conserved protein phosphatase complex involved in cisplatin sensitivity. Molecular & Cellular Proteomics, 4(11):1725-1740.

Pahlich, S; Bschir, K; Chiavi, C; Belyanskaya, L L; Gehring, H (2005). Different methylation characteristics of protein arginine methyltransferase 1 and 3 toward the Ewing Sarcoma protein and a peptide. Proteins, 61(1):164-175.

Cramer, Mirjam; Nagy, Ivana; Murphy, Brian J; Gassmann, Max; Hottiger, Michael O; Georgiev, Oleg; Schaffner, Walter (2005). NF-kappaB contributes to transcription of placenta growth factor and interacts with metal responsive transcription factor-1 in hypoxic human cells. Biological Chemistry, 386(9):865-872.

Grossmann, J; Roos, F F; Cieliebak, M; Lipták, Z; Mathis, L K; Müller, M; Gruissem, W; Baginsky, S (2005). AUDENS: a tool for automated peptide de novo sequencing. Journal of Proteome Research, 4(5):1768-1774.

Zobi, F; Spingler, B; Alberto, R (2005). Guanine and plasmid DNA binding of mono- and trinuclear fac-[Re(CO)3]+ complexes with amino acid ligands. ChemBioChem, 6(8):1397-1405.

Gavín, R; Braun, N; Nicolas, O; Parra, B; Ureña, J M; Mingorance, A; Soriano, E; Torres, J M; Aguzzi, A; del Río, J A (2005). PrP(106-126) activates neuronal intracellular kinases and Egr1 synthesis through activation of NADPH-oxidase independently of PrPc. FEBS Letters, 579(19):4099-4106.

Buterin, T; Meyer, C; Giese, B; Naegeli, H (2005). DNA quality control by conformational readout on the undamaged strand of the double helix. Chemistry & Biology, 12(8):913-922.

Locatelli, G A; Savio, M; Forti, L; Shevelev, I; Ramadan, K; Stivala, L A; Vannini, V; Hübscher, U; Spadari, S; Maga, G (2005). Inhibition of mammalian DNA polymerases by resveratrol: mechanism and structural determinants. Biochemical Journal, 389(2):259-268.

Schrimpf, S P; Meskenaite, V; Brunner, E; Rutishauser, D; Walther, P; Eng, J K; Aebersold, R; Sonderegger, P (2005). Proteomic analysis of synaptosomes using isotope-coded affinity tags and mass spectrometry. Proteomics, 5(10):2531-2541.

Smirnova, E; Toueille, M; Markkanen, E; Hübscher, U (2005). The human checkpoint sensor and alternative DNA clamp Rad9-Rad1-Hus1 modulates the activity of DNA ligase I, a component of the long-patch base excision repair machinery. Biochemical Journal, 389(1):13-17.

Bertschi, Isabelle; Collomb, Marius; Rist, Lukas; Eberhard, Pius; Sieber, Robert; Bütikofer, Ulrich; Wechsler, Daniel; Folkers, Gerd; von Mandach, Ursula (2005). Maternal dietary alpine butter intake affects human milk: Fatty acids and conjugated linoleic acid isomers. Lipids, 40(6):581-587.

Schimmele, Bernhard; Gräfe, Nico; Plückthun, Andreas (2005). Ribosome display of mammalian receptor domains. Protein Engineering, Design & Selection, 18(6):285-294.

Malanga, M; Althaus, F R (2005). The role of poly(ADP-ribose) in the DNA damage signaling network. Biochemistry and Cell Biology, 83(3):354-364.

Fischer, Lisa; Haag-Diergarten, Silke; Scharrer, Erwin; Lutz, Thomas A (2005). Leukotriene and purinergic receptors are involved in the hyperpolarizing effect of glucagon in liver cells. BBA - Biochimica et Biophysica Acta, 1669(1):26-33.

Bienz, Stefan; Bisegger, Pascal; Guggisberg, Armin; Hesse, Manfred (2005). Polyamine alkaloids. Natural Product Reports, 22(5):647-658.

Malanga, M; Romano, M; Ferone, A; Petrella, A; Monti, G; Jones, R; Limatola, E; Farina, B (2005). Misregulation of poly(ADP-ribose) polymerase-1 activity and cell type-specific loss of poly(ADP-ribose) synthesis in the cerebellum of aged rats. Journal of Neurochemistry, 93(4):1000-1009.

Dip, R; Naegeli, H (2005). More than just strand breaks: the recognition of structural DNA discontinuities by DNA-dependent protein kinase catalytic subunit. FASEB Journal, 19(7):704-715.

Blanckenhorn, Wolf U; Llaurens, V (2005). Effects of temperature on cell size and number in the yellow dung fly Scathophaga stercoraria. Journal of Thermal Biology, 30(3):213-219.

Iwai, Hideo; Forrer, Patrik; Plückthun, Andreas; Güntert, Peter (2005). NMR solution structure of the monomeric form of the bacteriophage lamda capsid stabilizing protein gpD. Journal of Biomolecular NMR, 31(4):351-356.

Svetlova, M; Solovjeva, L; Blasius, M; Shevelev, I; Hubscher, U; Hanawalt, P; Tomilin, N (2005). Differential incorporation of halogenated deoxyuridines during UV-induced DNA repair synthesis in human cells. DNA Repair, 4(3):359-366.

Ott, D; Neldner, Y; Cèbe, R; Dodevski, I; Plückthun, A (2005). Engineering and functional immobilization of opioid receptors. Protein Engineering Design and Selection : PEDS, 18(3):153-160.

Knapp, M; Crihan, D; Seitsonen, A P; Over, H (2005). Hydrogen transfer reaction on the surface of an oxide catalyst. Journal of the American Chemical Society, 127(10):3236-3237.

Uelhoff, A; Tatzelt, J; Aguzzi, A; Winklhofer, K F; Haass, C (2005). A pathogenic PrP mutation and doppel interfere with polarized sorting of the prion protein. Journal of Biological Chemistry, 280(7):5137-5140.

Motterlini, R; Sawle, P; Hammad, J; Bains, S; Alberto, R; Foresti, R; Green, C J (2005). CORM-A1: a new pharmacologically active carbon monoxide-releasing molecule. FASEB Journal, 19(2):284-286.

Häfliger, P; Agorastos, N; Spingler, B; Georgiev, Oleg; Viola, G; Alberto, R (2005). Induction of DNA-double-strand breaks by auger electrons from 99mTc complexes with DNA-binding ligands. ChemBioChem, 6(2):414-421.

Kilic, Ulkan; Kilic, Ertugrul; Soliz, Jorge; Bassetti, Claudio I; Gassmann, Max; Hermann, Dirk M (2005). Erythropoietin protects from axotomy-induced degeneration of retinal ganglion cells by activating ERK-1/-2. FASEB Journal, 19(2):249-251.

Lecca, M R; Wagner, U; Patrignani, A; Berger, E G; Hennet, T (2005). Genome-wide analysis of the unfolded protein response in fibroblasts from congenital disorders of glycosylation type-I patients. FASEB Journal, 19(2):240-242.

Buterin, T; Koch, C; Naegeli, H (2005). Potential application of gene expression fingerprinting for food safety screening. Analytica Chimica Acta, 529(1-2):33-39.

Maga, G; Ramadan, K; Locatelli, G A; Shevelev, I; Spadari, S; Hübscher, U (2005). DNA elongation by the human DNA polymerase lambda polymerase and terminal transferase activities are differentially coordinated by proliferating cell nuclear antigen and replication protein A. Journal of Biological Chemistry, 280(3):1971-1981.

Trueb, B; Neuhauss, S C F; Baertschi, S; Rieckmann, T; Schild, C; Taeschler, S (2005). Fish possess multiple copies of fgfrl1, the gene for a novel FGF receptor. Biochimica et Biophysica Acta, 1727(1):65-74.

Meh, Primož; Pavšič, Miha; Turk, Vito; Baici, Antonio; Lenarčič, Brigita (2005). Dual concentration-dependent activity of thyroglobulin type-1 domain of testican: specific inhibitor and substrate of cathepsin L. Biological Chemistry, 386(1):75-83.

Brun, Kathrin A; Heimgartner, Heinz (2005). A new 2H-Azirin-3-amine as a synthon for 2-Methylaspartate. Helvetica Chimica Acta, 88(11):2951-2959.

Kipar, A; Baptiste, K; Meli, M L; Barth, A; Knietsch, M; Reinacher, M; Lutz, H (2005). Age-related dynamics of constitutive cytokine transcription levels of feline monocytes. Experimental Gerontology, 40(3):243-248.

Greisser, Johannes; Doebbeling, Udo; Roos, Malgorzata; Mueller, Beatrix; Schmid, Mirka; Burg, Günter; Kadin, Marshall E; Kempf, Werner (2005). Apoptosis in CD30-positive lymphoproliferative disorders of the skin. Experimental Dermatology, 14(5):380-385.

Philipova, Irena; Linden, Anthony; Heimgartner, Heinz (2005). Application of the "Direct Amide Cyclization" to Peptides Containing an Anthranilic Acid Residue. Helvetica Chimica Acta, 88:1711-1733.

Ferrari, S; Marin, O; Pagano, M A; Meggio, F; Hess, D; El-Shemerly, M; Krystyniak, A; Pinna, L A (2005). Aurora-A site specificity: a study with synthetic peptide substrates. Biochemical Journal, 390(1):293-302.

Keck, Martin E; Ströhle, Andreas (2005). Challenge studies in anxiety disorders. In: Holsboer, Florian; Ströhle, Andreas. Anxiety and Anxiolytic Drugs. Berlin, Heidelberg: Springer, 449-468.

Martin, F; Linden, T; Katschinski, D M; Oehme, F; Flamme, I; Mukhopadhyay, C K; Eckhardt, K; Tröger, J; Barth, S; Camenisch, G; Wenger, R H (2005). Copper-dependent activation of hypoxia-inducible factor (HIF)-1: implications for ceruloplasmin regulation. Blood, 105(12):4613-4619.

Schärer, Orlando D (2005). DNA interstrand crosslinks: natural and drug-induced DNA adducts that induce unique cellular responses. ChemBioChem, 6(1):27-32.

Keck, M E; Sartori, S B; Welt, T; Müller, M B; Ohl, F; Holsboer, F; Landgraf, R; Singewald, N (2005). Differences in serotonergic neurotransmission between rats displaying high or low anxiety/depression-like behaviour: effects of chronic paroxetine treatment. Journal of Neurochemistry, 92(5):1170-1179.

Pennanen, L; Götz, J (2005). Different tau epitopes define Abeta42-mediated tau insolubility. Biochemical and Biophysical Research Communications (BBRC), 337(4):1097-1101.

Zeller, A; Arras, M; Lazaris, A; Jurd, R; Rudolph, U (2005). Distinct molecular targets for the central respiratory and cardiac actions of the general anesthetics etomidate and propofol. FASEB Journal, 19(12):1677-1679.

Ortmann, Jana; Nett, Philipp C; Celeiro, Jennifer; Traupe, Tobias; Tornillo, Luigi; Hofmann-Lehmann, Regina; Haas, Elvira; Frank, Beat; Terraciano, Luigi M; Barton, Matthias (2005). Endothelin inhibition delays onset of hyperglycemia and associated vascular injury in type I diabetes: Evidence for endothelin release by pancreatic islet β-cells. Biochemical and Biophysical Research Communications, 334(2):689-695.

Arand, Michael; Cronin, Annette; Adamska, Magdalena; Oesch, Franz (2005). Epoxide hydrolases: structure, function, mechanism, and assay. In: Elsevier. Methods in Enzymology: Phase II Conjugation Enzymes and Transport Systems. New York: Elsevier, 569-588.

Fiege, Betina; Bonafé, Luisa; Ballhausen, Diana; Baumgartner, Matthias R; Thöny, Beat; Meili, David; Fiori, Laura; Giovannini, Marcello; Blau, Nenad (2005). Extended tetrahydrobiopterin loading test in the diagnosis of cofactor-responsive phenylketonuria: A pilot study. Molecular Genetics and Metabolism, 86:91-95.

Sommen, Geoffroy L; Linden, Anthony; Heimgartner, Heinz (2005). First synthesis of a selenazepane. Tetrahedron Letters, 46(39):6723-6725.

Hummel, J; Clauss, Marcus; Zimmermann, W; Johanson, K; Nørgaard, C; Pfeffer, E (2005). Fluid and particle retention in captive okapi (Okapia johnstoni). Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 140(4):436-444.

Schwendener, R; Schott, H (2005). Lipophilic arabinofuranosyl cytosine derivatives in liposomes. Methods in Enzymology, 391:58-70.

Gaugler, M N M; Tracy, J; Kuhnle, K; Crameri, A; Nitsch, R M; Mohajeri, M H (2005). Modulation of Alzheimer's pathology by cerebro-ventricular grafting of hybridoma cells expressing antibodies against Abeta in vivo. FEBS Letters, 579(3):753-756.

Keck, Martin E; Müller, M B (2005). Mutagenesis and knockout models: hypothalamic-pituitary-adrenocortical system. In: Holsboer, Florian; Ströhle, Andreas. Anxiety and Anxiolytic Drugs. Berlin, Heidelberg: Springer, 113-141.

Robinson, J A; Shankaramma, S C; Jetter, P; Kienzl, U; Schwendener, R; Vrijbloed, J W; Obrecht, D (2005). Properties and structure-activity studies of cyclic beta-hairpin peptidomimetics based on the cationic antimicrobial peptide protegrin I. Bioorganic & Medicinal Chemistry, 13(6):2055-2064.

David, D C; Hauptmann, S; Scherping, I; Schuessel, K; Keil, U; Rizzu, P; Ravid, R; Dröse, S; Brandt, U; Müller, W E; Eckert, A; Götz, J (2005). Proteomic and functional analyses reveal a mitochondrial dysfunction in P301L tau transgenic mice. Journal of Biological Chemistry, 280(25):23802-23814.

Maj, Mary C; MacKay, Neviana; Levandovskiy, Valeriy; Addis, Jane; Baumgartner, E Regula; Baumgartner, Matthias R; Robinson, Brian H; Cameron, Jessie M (2005). Pyruvate Dehydrogenase Phosphatase Deficiency: Identification of the First Mutation in Two Brothers and Restoration of Activity by Protein Complementation. Journal of Clinical Endocrinology & Metabolism, 90(7):4101-4107.

Tao, W Andy; Wollscheid, Bernd; O'Brien, Robert; Eng, Jimmy K; Li, Xiao-jun; Bodenmiller, Bernd; Watts, Julian D; Hood, Leroy; Aebersold, Ruedi (2005). Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry. Nature Methods, 2(8):591-598.

Fu, Changchun; Blagoev, Milen; Linden, Anthony; Heimgartner, Heinz (2005). Regio- and stereoselective formation of 1,3-Oxathiolanes by reactions of thiocarbonyl compounds with oxiranes. Phosphorus, Sulfur and Silicon and the Related Elements, 180(5-6):1309-1313.

Malaschichin, Sergej; Fu, Changchun; Linden, Anthony; Heimgartner, Heinz (2005). Ring enlargement and sulfur-transfer processes in SiO2-catalyzed reactions of thiocarbonyl compounds with optically active oxiranes. Helvetica Chimica Acta, 88(12):3253-3262.

Sommen, Geoffroy L; Linden, Anthony; Heimgartner, Heinz (2005). Selenium-Containing Heterocycles from Isoselenocyanates: Cycloaddition of Carbodiimides to Selenazetidines. Helvetica Chimica Acta, 88(4):766-773.

Dumoulin, Alexis; Grauschopf, Ulla; Bischoff, Markus; Thöny-Meyer, Linda; Berger-Bächi, Brigitte (2005). Staphylococcus aureus DsbA is a membrane-bound lipoprotein with thiol-disulfide oxidoreductase activity. Archives of Microbiology, 184(2):117-128.

Zeilhofer, Hanns Ulrich (2005). Synaptic modulation in pain pathways. In: Offermanns, S. Reviews of Physiology, Biochemistry and Pharmacology. Special Issue on Sensory Systems. Berlin: Springer, 73-100.

Jeremic, Tatjana; Linden, Anthony; Möhle, Kerstin; Heimgartner, Heinz (2005). Synthesis and conformational analysis of 18-membered Aib-containing cyclohexapeptides. Tetrahedron, 61(7):1871-1883.

Mlostoń, Grzegorz; Majchrzak, Agnieszka; Rutkowska, Marzena; Woznicka, Marta; Linden, Anthony; Heimgartner, Heinz (2005). Synthesis and reactions of a new cyclobutanethione derivative. Helvetica Chimica Acta, 88(10):2624-2636.

Clauss, Marcus; Gehrke, J; Hatt, Jean-Michel; Dierenfeld, E S; Flach, E J; Hermes, R; Castell, J; Streich, W Jürgen; Fickel, J (2005). Tannin-binding salivary proteins in three captive rhinoceros species. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 140(1):67-72.

Canevascini, S; Marti, M; Fröhli, E; Hajnal, A (2005). The Caenorhabditis elegans homologue of the proto-oncogene ect-2 positively regulates RAS signalling during vulval development. EMBO Reports, 6(12):1169-1175.

Pradeille, Nicolas; Zerbe, Oliver; Möhle, Kerstin; Linden, Anthony; Heimgartner, Heinz (2005). The First Total Synthesis of the Peptaibol Hypomurocin A1 and Its Conformation Analysis: an Application of the 'Azirine/Oxazolone Method'. Chemistry & Biodiversity, 2:1127-1152.

Mueller, A; Schäfer, B W; Ferrari, S; Weibel, M; Makek, M; Höchli, M; Heizmann, C W (2005). The calcium-binding protein S100A2 interacts with p53 and modulates its transcriptional activity. Journal of Biological Chemistry, 280(32):29186-29193.

Kratz, Christian P; Niemeyer, Charlotte M; Castleberry, Robert P; Cetin, Mualla; Bergsträsser, Eva; Emanuel, Peter D; Hasle, Henrik; Kardos, Gabriela; Klein, Cornelia; Kojima, Seiji; Stary, Jan; Trebo, Monika; Zecca, Marco; Gelb, Bruce D; Tartaglia, Marco; Loh, Mignon L (2005). The mutational spectrum of PTPN11 in juvenile myelomonocytic leukemia and Noonan syndrome/myeloproliferative disease. Blood, 106(6):2183-2185.

Mlostoń, Grzegorz; Urbaniak, Katarzyna; Gulea, Mihaela; Masson, Serge; Linden, Anthony; Heimgartner, Heinz (2005). [2+3]-Cycloadditions of Phosphonodithioformate S-Methanides with C=S, N=N, and C=C Dipolarophiles. Helvetica Chimica Acta, 88(10):2582-2592.

2004

Hornemann, Simone; Schorno, Christian; Wüthrich, Kurt (2004). NMR structure of the bovine prion protein isolated from healthy calf brains. EMBO Reports, 5(12):1159-1164.

Maga, G; Blanca, G; Shevelev, I; Frouin, I; Ramadan, K; Spadari, S; Villani, G; Hübscher, U (2004). The human DNA polymerase lambda interacts with PCNA through a domain important for DNA primer binding and the interaction is inhibited by p21/WAF1/CIP1. FASEB Journal, 18(14):1743-1745.

Benke, D; Fakitsas, P; Roggenmoser, C; Michel, C; Rudolph, U; Mohler, H (2004). Analysis of the presence and abundance of GABAA receptors containing two different types of alpha subunits in murine brain using point-mutated alpha subunits. Journal of Biological Chemistry, 279(42):43654-43660.

van Staveren, D R; Mundwiler, S; Hoffmanns, U; Pak, Jae Kyoung; Spingler, B; Metzler-Nolte, N; Alberto, R (2004). Conjugation of a novel histidine derivative to biomolecules and labelling with [99mTc(OH2)3(CO)3]+. Organic & Biomolecular Chemistry, 2(18):2593-2603.

Blanca, G; Villani, G; Shevelev, I; Ramadan, K; Spadari, S; Hübscher, U; Maga, G (2004). Human DNA polymerases lambda and beta show different efficiencies of translesion DNA synthesis past abasic sites and alternative mechanisms for frameshift generation. Biochemistry, 43(36):11605-11615.

Garner, T W J; Pearman, P; Gregory, P; Tomio, G; Wischniowski, S G; Hosken, D (2004). Microsatellite markers developed from Thamnophis elegans and Thamnophis sirtalis and their utility in three species of garter snakes. Molecular Ecology Resources, 4(3):369-371.

Rübben, Albert; Kempf, Werner; Kadin, Marshall E; Zimmermann, Dieter R; Burg, Günter (2004). Multilineage progression of genetically unstable tumor subclones in cutaneous T-cell lymphoma. Experimental Dermatology, 13(8):472-483.

Glatzel, M; Giger, O; Braun, N; Aguzzi, A (2004). The peripheral nervous system and the pathogenesis of prion diseases. Current Molecular Medicine, 4(4):355-359.

Fernandez, F J; Vega, M C; Lehmann, F; Sandmeier, E; Gehring, H; Christen, P; Wilmanns, M (2004). Structural studies of the catalytic reaction pathway of a hyperthermophilic histidinol-phosphate aminotransferase. Journal of Biological Chemistry, 279(20):21478-21488.

Röthlisberger, D; Pos, K M; Plückthun, A (2004). An antibody library for stabilizing and crystallizing membrane proteins - selecting binders to the citrate carrier CitS. FEBS Letters, 564(3):340-348.

Laib, Stephan; Seeger, Stefan (2004). FRET Studies of the Interaction of Dimeric Cyanine Dyes with DNA. Journal of Fluorescence, 14(2):187-191.

Manov, Nikolay; Tzouros, Manuel; Bigler, Laurent; Bienz, Stefan (2004). Solid-phase synthesis of 15N-labeled acylpentamines as reference compounds for the MS/MS investigation of spider toxins. Tetrahedron, 60(10):2387-2391.

Grimsley, C M; Kinchen, J M; Tosello-Trampont, A C; Brugnera, E; Haney, L B; Lu, M; Chen, Q; Klingele, D; Hengartner, M O; Ravichandran, K S (2004). Dock180 and ELMO1 proteins cooperate to promote evolutionarily conserved Rac-dependent cell migration. Journal of Biological Chemistry, 279(7):6087-6097.

Westling, Jennifer; Gottschall, Paul E; Thompson, Vivian P; Cockburn, Amber; Perides, George; Zimmermann, Dieter R; Sandy, John D (2004). ADAMTS4 (aggrecanase-1) cleaves human brain versican V2 at Glu405-Gln406 to generate glial hyaluronate binding protein. Biochemical Journal, 377(Pt 3):787-795.

Di Sole, F; Cerull, R; Babich, V; Quiñones, H; Gisler, S M; Biber, J; Murer, H; Burckhardt, G; Helmle-Kolb, C; Moe, O W (2004). Acute regulation of Na/H exchanger NHE3 by adenosine A(1) receptors is mediated by calcineurin homologous protein. Journal of Biological Chemistry, 279(4):2962-2974.

Reetz, Manfred T; Torre, Claudia; Eipper, Andreas; Lohmer, Renate; Hermes, Marcus; Brunner, Birgit; Maichele, Andrea; Bocola, Marco; Arand, Michael; Cronin, Annette; Genzel, Yvonne; Archelas, Alain; Furstoss, Roland (2004). Enhancing the enantioselectivity of an epoxide hydrolase by directed evolution. Organic Letters, 6(2):177-180.

Krieg, Alexander; Ruckstuhl, Thomas; Laib, Stephan; Seeger, Stefan (2004). Real-Time Detection of Polymerase Activity Using Supercritical Angle Fluorescence. Journal of Fluorescence, 14(1):75-78.

Hilty, Florentine M; Brun, Kathrin A; Heimgartner, Heinz (2004). A New 2H-Azirin-3-amine as a Synthon for α-Methyl Glutamate. Helvetica Chimica Acta, 87(10):2539-2548.

Chastel, C; Jiricny, J; Jaussi, R (2004). Activation of stress-responsive promoters by ionizing radiation for deployment in targeted gene therapy. DNA Repair, 3(3):201-215.

Mohajeri, M H; Kuehnle, K; Li, H; Poirier, R; Tracy, J; Nitsch, R M (2004). Anti-amyloid activity of neprilysin in plaque-bearing mouse models of Alzheimer's disease. FEBS Letters, 562(1-3):16-21.

Veljkovic, E; Bacconi, A; Stetak, A; Hajnal, A; Stasiuk, S; Skelly, P J; Forster, I; Shoemaker, C B; Verrey, F (2004). Aromatic amino acid transporter AAT-9 of Caenorhabditis elegans localizes to neurons and muscle cells. Journal of Biological Chemistry, 279(47):49268-49273.

Mekhael, Maged K G; Bienz, Stefan; Linden, Anthony; Heimgartner, Heinz (2004). Azirine/Oxindole ring enlargement via Amidinium intermediates. Helvetica Chimica Acta, 87(9):2385-2404.

Dip, R; Naegeli, H (2004). Binding of the DNA-dependent protein kinase catalytic subunit to holliday junctions. Biochemical Journal, 381(Pt. 1):165-174.

Ott, D; Frischknecht, R; Plückthun, A (2004). Construction and characterization of a kappa opioid receptor devoid of all free cysteines. Protein Engineering Design and Selection : PEDS, 17(1):37-48.

Atanassov, Plaen K; Linden, Anthony; Heimgartner, Heinz (2004). Derivatives from Isoselenocyanates: Synthesis of 2-Phenyl-6H-[5,1,3]benzoselenadiazocine. Helvetica Chimica Acta, 87:1452-1466.

Bienz, Stefan; Hesse, Manfred (2004). Eine neue Synthese von Muscon undExalton®: Die Enamin-Route der Ringerweiterungsreaktion. Helvetica Chimica Acta, 71(7):1704-1707.

Peduto, Antonella; Baumgartner, Matthias R; Verhoeven, Nanda M; Rabier, Daniel; Spada, Marco; Nassogne, Marie-Cecile; Poll-The, Bwee-Tien T; Bonetti, Giovanni; Jakobs, Cornelis; Saudubray, Jean-Marie (2004). Hyperpipecolic acidaemia: a diagnostic tool for peroxisomal disorders. Molecular Genetics and Metabolism, 82(3):224-230.

Clauss, Marcus; Schwarm, A; Ortmann, S; Alber, D; Flach, E J; Kühne, R; Hummel, J; Streich, W J; Hofer, H (2004). Intake, ingesta retention, particle size distribution and digestibility in the hippopotamidae. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 139(4):449-459.

Dip, R; Camenisch, U; Naegeli, H (2004). Mechanisms of DNA damage recognition and strand discrimination in human nucleotide excision repair. DNA Repair, 3(11):1409-1423.

Stojic, L; Brun, R; Jiricny, J (2004). Mismatch repair and DNA damage signalling. DNA Repair, 3(8-9):1091-1101.

Carrière, A; Carmona, M C; Fernandez, Y; Rigoulet, M; Wenger, R H; Pénicaud, L; Casteilla, L (2004). Mitochondrial reactive oxygen species control the transcription factor CHOP-10/GADD153 and adipocyte differentiation: a mechanism for hypoxia-dependent effect. Journal of Biological Chemistry, 279(39):40462-40469.

Alberto, R; Pak, J K; van Staveren, D R; Mundwiler, S; Benny, P (2004). Mono-, bi-, or tridentate ligands? The labeling of peptides with 99mTc-carbonyls. Biopolymers, 76(4):324-333.

Fässler, Jürg; Huber, Priska; Bratovanov, Svetoslav; Bigler, Laurent; Bild, Norbert; Bienz, Stefan (2004). Neighboring-Group participation in the gas phase. Loss of benzaldehyde from [(benzyloxy)methyl]dialkylsilyl-substituted 1,3-dithianes. Helvetica Chimica Acta, 78(7):1855-1862.

Urbaniak, Katarzyna; Szymański, Radoslaw; Romański, Jaroslaw; Mlostoń, Grzegorz; Domagala, Malgorzata; Linden, Anthony; Heimgartner, Heinz (2004). New Studies on [2 + 3] Cycloadditions of Thermally Generated N-Isopropyl- and N-(4-Methoxyphenyl)-Substituted Azomethine Ylides. Helvetica Chimica Acta, 87:496-510.

Malanga, M; Althaus, F R (2004). Poly (ADP-ribose) reactivates stalled DNA topoisomerase I and induces DNA strand break resealing. Journal of Biological Chemistry, 279(7):5244-5248.

Majchrzak, Agnieszka; Mlostoń, Grzegorz; Linden, Anthony; Heimgartner, Heinz (2004). Reactions of Sulfanyl Chlorides with Thiocamphor and Thiofenchone: Wagner-Meerwein Rearrangement of an Intermediate Thiocarbonylium Ion. Helvetica Chimica Acta, 87:790-799.

Hoerndli, F J; Toigo, M; Schild, A; Götz, J; Day, P J (2004). Reference genes identified in SH-SY5Y cells using custom-made gene arrays with validation by quantitative polymerase chain reaction. Analytical Biochemistry, 335(1):30-41.

Fu, Changchun; Linden, Anthony; Heimgartner, Heinz (2004). Regio- and stereoselective 1,3-Oxathiolane formation in the reaction of Thiolactones with optically active oxiranes. Helvetica Chimica Acta, 87(9):2296-2309.

Fu, Changchun; Thrane, Marie V; Linden, Anthony; Heimgartner, Heinz (2004). Regio- and stereoselective reactions of a rhodanine derivative with optically active 2-methyl- and 2-phenyloxirane. Tetrahedron, 60:5407-5412.

Hofer, T; Pohjanvirta, R; Spielmann, P; Viluksela, M; Buchmann, D P; Wenger, R H; Gassmann, M (2004). Simultaneous exposure of rats to dioxin and carbon monoxide reduces the xenobiotic but not the hypoxic response. Biological Chemistry, 385(3-4):291-294.

Jeremic, Tatjana; Linden, Anthony; Heimgartner, Heinz (2004). Solution-phase synthesis of Aib-containing cyclic hexapeptides. Chemistry & Biodiversity, 1(11):1730-1761.

Dutzler, R (2004). Structural basis for ion conduction and gating in ClC chloride channels. FEBS Letters, 564(3):229-33.

Bienz, Stefan; Guggisberg, Armin; Wälchli, Rudolf; Hesse, Manfred (2004). Synthese der Spermidin-Alkaloide (±)-Inandenin-10-ol, Inandenin-10-on und (±)-Oncinotin. Helvetica Chimica Acta, 71(7):1708-1718.

Wälchli, Rudolf; Bienz, Stefan; Hesse, Manfred (2004). Synthese macrocyclischer Lactame aus Ketonen durch Ringerweiterung. Helvetica Chimica Acta, 68(2):484-492.

Bienz, Stefan; Hesse, Manfred (2004). Synthese makrocyclischer Ketone durch Ringerweiterung; ein neuer Weg zu$(\pm)$-Muscon. Helvetica Chimica Acta, 70(8):2146-2151.

Moricz, Attila; Gassmann, Elisabeth; Bienz, Stefan; Hesse, Manfred (2004). Synthesis of $\pm$-pyrenolide B. Helvetica Chimica Acta, 78(3):663-669.

Atanassov, Plamen K; Linden, Anthony; Heimgartner, Heinz (2004). Synthesis of 4-(Phenylamino)quinazoline-2(1H)-selones and Diselenides from Isoselenocyanates: Dimroth Rearrangement of an Intermediate. Helvetica Chimica Acta, 87(7):1873-1887.

Jeremic, Tatjana; Linden, Anthony; Heimgartner, Heinz (2004). Synthesis of Cyclohexapeptides containing Pro and Aib residues. Helvetica Chimica Acta, 87(12):3056-3079.

Suormala, Terttu; Baumgartner, Matthias R; Coelho, David; Zavadakova, Petra; Kožich, Viktor; Koch, Hans Georg; Berghaüser, Martin; Wraith, James E; Burlina, Alberto; Sewell, Adrian; Herwig, Jürgen; Fowler, Brian (2004). The cblD Defect Causes Either Isolated or Combined Deficiency of Methylcobalamin and Adenosylcobalamin Synthesis. Journal of Biological Chemistry, 279(41):42742-42749.

Gademann, Karl; Bethuel, Yann (2004). Total Synthesis of Anachelin H. Organic Letters, 6(25):4707-4710.

Smith, Richard J; Bienz, Stefan (2004). Towards Functionalized Silicon-Containingα-Amino Acids: Asymmetric Syntheses of Sila Analogs of Homoserine and Homomethionine. Helvetica Chimica Acta, 87(7):1681-1696.

Tzouros, Manuel; Bigler, Laurent; Bienz, Stefan; Hesse, Manfred; Inada, Akira; Murata, Hiroko; Inatomi, Yuka; Nakanishi, Tsutomu; Darnaedi, Dedy (2004). Two new spermidine alkaloids from Chisocheton weinlandii. Helvetica Chimica Acta, 87(6):1411-1425.

2003

Gygi, Daniel; Zumstein, Peter; Grossenbacher, Doris; Altwegg, Lukas; Lüscher, Thomas F; Gehring, Heinz (2003). Human connective tissue growth factor expressed in Escherichia coli is a non-mitogenic inhibitor of apoptosis. Biochemical and Biophysical Research Communications (BBRC), 311(3):685-690.

Galli Marxer, C; Collaud Coen, M; Greber, T; Greber, U F; Schlapbach, L (2003). Cell spreading on quartz crystal microbalance elicits positive frequency shifts indicative of viscosity changes. Analytical and Bioanalytical Chemistry, 377(3):578-586.

Galli Marxer, C; Collaud Coen, M; Bissig, H; Greber, U F; Schlapbach, L (2003). Simultaneous measurement of the maximum oscillation amplitude and the transient decay time constant of the QCM reveals stiffness changes of the adlayer. Analytical and Bioanalytical Chemistry, 377(3):570-577.

Hutter, G; Heppner, F L; Aguzzi, A (2003). No superoxide dismutase activity of cellular prion protein in vivo. Biological Chemistry, 384(9):1279-1285.

Guintchin, Boris; Bienz, Stefan (2003). Stereoconvergent preparation of chiral vinylsilanes by cuprate substitution of α-acetoxyallylsilanes. Application to the synthesis of ( S )-(+)-bishomomanicone. Tetrahedron, 59(38):7527-7533.

Kulminskaya, Anna A; Arand, Michael; Eneyskaya, Elena V; Ivanen, Dina R; Shabalin, Konstantin A; Shishlyannikov, Sergei M; Saveliev, Andrew N; Korneeva, Olga S; Neustroev, Kirill N (2003). Biochemical characterization of Aspergillus awamori exoinulinase: substrate binding characteristics and regioselectivity of hydrolysis. BBA - Biochimica et Biophysica Acta, 1650(1-2):22-29.

Elzaouk, L; Leimbacher, W; Turri, M; Ledermann, B; Burki, K; Blau, N; Thony, B (2003). Dwarfism and low insulin-like growth factor-1 due to dopamine depletion in Pts-/- mice rescued by feeding neurotransmitter precursors and H4-biopterin. Journal of Biological Chemistry, 278(30):28303-28311.

Henneke, G; Friedrich-Heineken, E; Hübscher, U (2003). Flap endonuclease 1: a novel tumour suppresser protein. Trends in Biochemical Sciences, 28(7):384-390.

Odelius, M; Laikov, D; Hutter, J (2003). Excited state geometries within time-dependent and restricted open-shell density functional theories. Journal of Molecular Structure THEOCHEM, 630(1-3):163-175.

Blanca, G; Shevelev, I; Ramadan, K; Villani, G; Spadari, S; Hübscher, U; Maga, G (2003). Human DNA polymerase lambda diverged in evolution from DNA polymerase beta toward specific Mn(++) dependence: a kinetic and thermodynamic study. Biochemistry, 42(24):7467-7476.

Iyer, Dinakar; Belaguli, Narasimhaswamy; Flück, Martin; Rowan, Brian G; Wei, Lei; Weigel, Nancy L; Booth, Frank W; Epstein, Henry F; Schwartz, Robert J; Balasubramanyam, Ashok (2003). Novel phosphorylation target in the serum response factor MADS box regulates alpha-actin transcription. Biochemistry, 42(24):7477-7486.

Trotman, L C; Achermann, D P; Keller, S; Straub, M; Greber, U F (2003). Non-classical export of an adenovirus structural protein. Traffic, 4(6):390-402.

Garner, T W J; Schmidt, B R; Hoeck, P; Van Buskirk, J (2003). Di- and tetranucleotide microsatellite markers for the Alpine newt (Triturus alpestris): characterization and cross-priming in five congeners. Molecular Ecology Resources, 3(2):186-188.

Blanca, G; Baldanti, F; Paolucci, S; Skoblov, A Y; Victorova, L; Hübscher, U; Gerna, G; Spadari, S; Maga, G (2003). Nevirapine resistance mutation at codon 181 of the HIV-1 reverse transcriptase confers stavudine resistance by increasing nucleotide substrate discrimination and phosphorolytic activity. Journal of Biological Chemistry, 278(18):15469-15472.

Henneke, G; Koundrioukoff, S; Hübscher, U (2003). Multiple roles for kinases in DNA replication. EMBO Reports, 4(3):252-256.

Greber, U F; Fassati, A (2003). Nuclear import of viral DNA genomes. Traffic, 4(3):136-143.

Stingele, R; Schnippering, H; Keller, E; Steiner, T; Hacke, W (2003). Transcranial oximetry using fast near infrared spectroscopy can detect failure of collateral blood supply in humans. Comparative Biochemistry and Physiology. Part A, Molecular & Integrative Physiology, 134(3):539-543.

Moransard, M; Borges, L S; Willmann, R; Marangi, P A; Brenner, H R; Ferns, M J; Fuhrer, Christian (2003). Agrin regulates rapsyn interaction with surface acetylcholine receptors, and this underlies cytoskeletal anchoring and clustering. Journal of Biological Chemistry:7350-7359.

Prinz, M; Heikenwalder, M; Schwarz, Petra; Takeda, K; Akira, S; Aguzzi, A (2003). Prion pathogenesis in the absence of Toll-like receptor signalling. EMBO Reports, 4(2):195-199.

Labeyrie, Estelle; Blanckenhorn, Wolf U; Rahier, Martine (2003). Mate Choice and Toxicity in Two Species of Leaf Beetles with Different Types of Chemical Defense. Journal of Chemical Ecology, 29(7):1665-1680.

Zaugg, Michael; Schaub, Marcus C (2003). Signaling and cellular mechanisms in cardiac protection by ischemic and pharmacological preconditioning. Journal of muscle research and cell motility, 24(2/3):219-249.

Fu, Changchun; Linden, Anthony; Heimgartner, Heinz (2003). 1,3-Oxathiolanes from the reaction of aromatic and enolized thioketones with monosubstituted oxiranes. Helvetica Chimica Acta, 86:2833-2847.

Mekhael, Maged K G; Heimgartner, Heinz (2003). A Novel Synthetic Approach to (±)-Desoxynoreseroline. Helvetica Chimica Acta, 86:2805-2813.

Iliev, Boyan; Linden, Anthony; Heimgartner, Heinz (2003). An unexpected formation of a 14-membered Cyclodepsipeptide. Helvetica Chimica Acta, 86(9):3215-3234.

Console, S; Marty, C; García-Echeverría, C; Schwendener, R; Ballmer-Hofer, K (2003). Antennapedia and HIV transactivator of transcription (TAT) "protein transduction domains" promote endocytosis of high molecular weight cargo upon binding to cell surface glycosaminoglycans. Journal of Biological Chemistry, 278(37):35109-35114.

Ferrari, A; Hoerndli, F; Baechi, T; Nitsch, R M; Götz, J (2003). Beta-Amyloid induces paired helical filament-like tau filaments in tissue culture. Journal of Biological Chemistry, 278(41):40162-40168.

Clauss, Marcus; Lason, K; Gehrke, J; Lechner-Doll, M; Fickel, J; Grune, T; Streich, W J (2003). Captive roe deer (Capreolus capreolus) select for low amounts of tannic acid but not quebracho: fluctuation of preferences and potential benefits. Comparative Biochemistry and Physiology - Part B: Biochemistry and Molecular Biology, 136(2):369-382.

Schlosser, J A; Garner, W J; Dubach, M; McElligott, A G (2003). Characterization of microsatellite loci in Humboldt penguin (Spheniscus humboldti) and cross-amplification in other penguin species. Molecular Ecology Resources, 3(1):62-64.

Stamm, Simon; Linden, Anthony; Heimgartner, Heinz (2003). Chiral Heterospirocyclic 2H-Azirin-3-amines as Synthons for 3-Amino-2,3,4,5-tetrahydrofuran-3-carboxylic Acid and Their Use in Peptide Synthesis. Helvetica Chimica Acta, 86:1371-1396.

Crawford, R M; Jovanovic, S; Budas, G R; Davies, A M; Lad, H; Wenger, R H; Robertson, K A; Roy, D J; Ranki, H J; Jovanovic, A (2003). Chronic mild hypoxia protects heart-derived H9c2 cells against acute hypoxia/reoxygenation by regulating expression of the SUR2A subunit of the ATP-sensitive K+ channel. Journal of Biological Chemistry, 278(33):31444-31455.

Fontana Gasio, P; Kräuchi, K; Cajochen, C; van Someren, E; Amrhein, I; Pache, M; Savaskan, E; Wirz-Justice, A (2003). Dawn-dusk simulation light therapy of disturbed circadian rest-activity cycles in demented elderly. Experimental Gerontology, 38(1-2):207-216.

Schumacher, S B; van den Hauwe, O; van Peteghem, C H; Naegeli, H (2003). Development of a dual luciferase reporter screening assay for the detection of synthetic glucocorticoids in animal tissues. Analyst, 128(12):1406-1412.

Sartori, Alessandro A; Jiricny, J (2003). Enzymology of base excision repair in the hyperthermophilic archaeon Pyrobaculum aerophilum. Journal of Biological Chemistry, 278(27):24563-24576.

Ruschitzka, F; et al; Lüscher, T F; Gassmann, M (2003). Erythropoietin-induced excessive erythrocytosis activates the tissue endothelin system in mice. FASEB Journal, 17(2):259-261.

Jurd, R; Arras, M; Lambert, S; Drexler, B; Siegwart, R; Crestani, F; Zaugg, M; Vogt, K E; Ledermann, B; Antkowiak, B; Rudolph, U (2003). General anesthetic actions in vivo strongly attenuated by a point mutation in the GABA(A) receptor beta3 subunit. FASEB Journal, 17(2):250-252.

Dehnhard, M; Hatt, Jean-Michel; Eulenberger, Klaus; Ochs, A; Strauss, G (2003). Headspace solid-phase microextraction (SPME) and gas chromatography-mass spectrometry (GC-MS) for the determination of 5alpha-androst-2-en-17-one and -17beta-ol in the female Asian elephant: application for reproductive monitoring and prediction of parturition. Journal of Steroid Biochemistry and Molecular Biology, 84(2-3):383-391.

Shibata, J H W; Hasegawa, J; Siemens, H J; Wolber, E; Dibbelt, L; Li, D; Katschinski, D M; Fandrey, J; Jelkmann, W; Gassmann, M; Wenger, R H; Wagner, K F (2003). Hemostasis and coagulation at a hematocrit level of 0.85: functional consequences of erythrocytosis. Blood, 101(11):4416-4422.

Hofer, T; Wenger, R H; Kramer, M F; Ferreira, G C; Gassmann, M (2003). Hypoxic up-regulation of erythroid 5-aminolevulinate synthase. Blood, 101(1):348-350.

Li, Feng-Qian; Person, Richard E; Takemaru, Ken-Ichi; Williams, Kayleen; Meade-White, Kimberly; Ozsahin, Ayse H; Güngör, Tayfun; Moon, Randall T; Horwitz, Marshall (2003). Lymphoid Enhancer Factor-1 Links Two Hereditary Leukemia Syndromes through Core-binding Factor α Regulation of ELA2. Journal of Biological Chemistry, 279(4):2873-2884.

Kunz, M; Moeller, S; Koczan, D; Lorenz, P; Wenger, R H; Glocker, M O; Thiesen, H J; Gross, G; Ibrahim, S M (2003). Mechanisms of hypoxic gene regulation of angiogenesis factor Cyr61 in melanoma cells. Journal of Biological Chemistry, 278(46):45651-45660.

Muheim, R; Buterin, T; Colgate, K C; Kolbanovsij, A; Geacintov, N E; Naegeli, H (2003). Modulation of human nucleotide excision repair by 5-methylcytosines. Biochemistry, 42(11):3247-3254.

Angenendt, P; Glökler, J; Sobek, J; Lehrach, H; Cahill, D J (2003). Next generation of protein microarray support materials: evaluation for protein and antibody microarray applications. Journal of chromatography. A, 1009(1-2):97-104.

Majchrzak, Agnieszka; Janczak, Aleksandra; Mlostoń, Grzegorz; Linden, Anthony; Heimgartner, Heinz (2003). Reactions of stable alpha-chlorosulfanyl chlorides with C=S-functionalized compounds. Helvetica Chimica Acta, 86:2272-2283.

Fu, Changchun; Linden, Anthony; Heimgartner, Heinz (2003). Regio- and Stereoselectivity of the SiO2-Catalyzed Reaction of Thiocamphor (= 1,7,7-Trimethylbicyclo[2.2.1]heptane-2-thione) with Optically Active Monosubstituted Oxiranes. Helvetica Chimica Acta, 86:2258-2271.

Yan, S; Wu, M; Buterin, T; Naegeli, H; Geacintov, N E; Broyde, S (2003). Role of base sequence context in conformational equilibria and nucleotide excision repair of benzo[a]pyrene diol epoxide-adenine adducts. Biochemistry, 42(8):2339-2354.

Atanassov, Plamen K; Linden, Anthony; Heimgartner, Heinz (2003). Selenium-containing heterocycles from Isoselenocyanates: Synthesis of 1H-5-Selena-1,3,6-triazaaceanthrylene derivatives. Helvetica Chimica Acta, 86(9):3235-3243.

Elwan, Nehal M; Awad, Enas M; Hassaneen, Hamdi M; Linden, Anthony; Heimgartner, Heinz (2003). Synthesis of 1,2,4-Triazolo[4,3-a]pyrimidine Derivatives by Cyclocondensation of a 2-Thioxopyrimidin-4(3H)-one with Hydrazonoyl Halides. Helvetica Chimica Acta, 86:739-749.

Luykx, Roeland T N; Linden, Anthony; Heimgartner, Heinz (2003). Synthesis of a Derivative of the Peptaibol-Antibiotic Trichovirin I 1B by means of the 'Azirine/Oxazolone Method'. Helvetica Chimica Acta, 86(12):4093-4111.

Pradeille, Nicolas; Heimgartner, Heinz (2003). Synthesis of the protected 6–16 segment of Zervamicin II-2, an application of the Azirine/Oxazolone method. Journal of Peptide Science, 9(11-12):827-837.

Pedrazzi, G; Bachrati, C Z; Selak, N; Studer, I; Petkovic, M; Hickson, I D; Jiricny, J; Stagljar, I (2003). The Bloom's syndrome helicase interacts directly with the human DNA mismatch repair protein hMSH6. Biological Chemistry, 384(8):1155-1164.

Linden, T; Katschinski, D M; Eckhardt, K; Scheid, A; Pagel, H; Wenger, R H (2003). The antimycotic ciclopirox olamine induces HIF-1alpha stability, VEGF expression, and angiogenesis. FASEB Journal, 17(6):761-763.

Gess, B; Hofbauer, K H; Wenger, R H; Lohaus, C; Meyer, H E; Kurtz, A (2003). The cellular oxygen tension regulates expression of the endoplasmic oxidoreductase ERO1-Lalpha. FEBS Journal, 270(10):2228-2235.

Heller, M; von der Ohe, M; Kleene, R; Mohajeri, M H; Schachner, M (2003). The immunoglobulin-superfamily molecule basigin is a binding protein for oligomannosidic carbohydrates: an anti-idiotypic approach. Journal of Neurochemistry, 84(3):557-565.

Götz, J; Schild, A (2003). Transgenic and knockout models of PP2A. Methods in Enzymology, 366:390-403.

2002

Maga, G; Villani, G; Ramadan, K; Shevelev, I; Tanguy Le Gac, N; Blanco, L; Blanca, G; Spadari, S; Hübscher, U (2002). Human DNA polymerase lambda functionally and physically interacts with proliferating cell nuclear antigen in normal and translesion DNA synthesis. Journal of Biological Chemistry, 277(50):48434-48440.

Hofer, T; Desbaillets, I; Höpfl, G R; Wenger, R H; Gassmann, M (2002). Characterization of HIF-1 alpha overexpressing HeLa cells and implications for gene therapy. Comparative Biochemistry and Physiology - Part C: Toxicology & Pharmacology, 133(4):475-481.

Hildebrand, B; Olenik, C; Theodoridu, A; Boeckh, C; Uhl, A; Meyer, D K (2002). Noradrenaline Increases the Expression of the Proenkephalin Gene in Cultured Astroglial Cells by Acting on β1- and α1-Adrenoceptors. Journal of Neurochemistry, 66(5):1860-1867.

Gagnon, S N; Hengartner, M O; Desnoyers, S (2002). The genes pme-1 and pme-2 encode two poly(ADP-ribose) polymerases in Caenorhabditis elegans. Biochemical Journal, 368(1):263-271.

Summerer, Stephan; Hanano, Abdulsamie; Utsumi, Shigeru; Arand, Michael; Schuber, Francis; Blée, Elizabeth (2002). Stereochemical features of the hydrolysis of 9,10-epoxystearic acid catalysed by plant and mammalian epoxide hydrolases. Biochemical Journal, 366(Pt 2):471-480.

Nelson, R J; Cooper, G; Garner, T; Schnupf, P (2002). Polymorphic markers for the sea cucumber Parastichopus californicus. Molecular Ecology Resources, 2(3):233-235.

Bagorda, A; Guerra, L; Di Sole, F; Hemle-Kolb, C; Cardone, R A; Fanelli, T; Reshkin, S J; Gisler, S M; Murer, H; Casavola, V (2002). Reciprocal protein kinase A regulatory interactions between cystic fibrosis transmembrane conductance regulator and Na+/H+ exchanger isoform 3 in a renal polarized epithelial cell model. Journal of Biological Chemistry, 277(24):21480-21488.

Ramadan, K; Shevelev, I V; Maga, G; Hübscher, U (2002). DNA polymerase lambda from calf thymus preferentially replicates damaged DNA. Journal of Biological Chemistry, 277(21):18454-18458.

Greber, U F; Carafoli, E (2002). Signalling takes control of nucleo-cytoplasmic trafficking. Workshop on signal-regulated nuclear transport. EMBO Reports, 3(5):410-414.

Bino, A; Ardon, M; Lee, D; Spingler, Bernhard; Lippard, S J (2002). Synthesis and structure of Fe13O4F24(OMe)(12)](5-): The first open-shelf Keggin ion. Journal of the American Chemical Society, 124(17):4578-4579.

Kunz, K; Erker, G; Kehr, G; Fröhlich, R; Jacobsen, H; Berke, Heinz; Blacque, Olivier (2002). Formation of cyclodimeric (sp(2)-C(1))-bridged Cp/-oxido ("CpC(1)O"M(IV)X(2)) group 4 metal Ziegler-Natta catalyst systems--how important is the "constrained geometry" effect? Journal of the American Chemical Society, 124(13):3316-3326.

Arand, Michael; Golubev, Alexander M; Neto, J R Brandao; Polikarpov, Igor; Wattiez, R; Korneeva, Olga S; Eneyskaya, Elena V; Kulminskaya, Anna A; Shabalin, Konstantin A; Shishlyannikov, Sergei M; Chepurnaya, Olga V; Neustroev, Kirill N (2002). Purification, characterization, gene cloning and preliminary X-ray data of the exo-inulinase from Aspergillus awamori. Biochemical Journal, 362(Pt 1):131-135.

Kunz, B; Lierheimer, R; Rader, C; Spirig, M; Ziegler, U; Sonderegger, P (2002). Axonin-1/TAG-1 mediates cell-cell adhesion by a cis-assisted trans-interaction. Journal of Biological Chemistry, 277(6):4551-4557.

Berger, E G (2002). Ectopic localizations of Golgi glycosyltransferases. Glycobiology, 12(2):29R-36R.

Mueller, Nicolas J; Walter, Roland Β; Linscheid, Philippe; Schaffner, Andreas; Schoedon, Gabriele (2002). Differential Inhibition of Constitutive and Inducible Nitric Oxide Synthase in Vascular Endothelial Cells by Analogues of Tetrahydrobiopterin. Pteridines:n/a.

Gökçen, O A; Morgan, E D; Dani, F R; Agosti, D; Wehner, R (2002). Dufour gland contents of ants of the Cataglyphis bicolor group. Journal of Chemical Ecology, 28(1):71-87.

Mlostoń, Grzegorz; Urbaniak, Katarzyna; Heimgartner, Heinz (2002). 1,3-Thiazolidine-dicarboxylates from Thioketones and Thermally Generated Azomethine Ylides. Helvetica Chimica Acta, 85:2056-2064.

Ziegler, S; Bürki, K; Skoda, R C (2002). A 2-kb c-mpl promoter fragment is sufficient to direct expression to the megakaryocytic lineage and sites of embryonic hematopoiesis in transgenic mice. Blood, 100(3):1072-1074.

Trzoss, Michael; Shao, Jie; Bienz, Stefan (2002). A chiral silyl ether as auxiliary for the asymmetric nucleophilic addition to α- and β-silyloxy carbonyl compounds. Tetrahedron, 58(29):5885-5894.

Hinks, J A; Evans, M C W; De Miguel, Y; Sartori, Alessandro A; Jiricny, J; Pearl, L H (2002). An iron-sulfur cluster in the family 4 uracil-DNA glycosylases. Journal of Biological Chemistry, 277(19):16936-19640.

Glatzel, M; Pekarik, V; Lührs, T; Dittami, J; Aguzzi, A (2002). Analysis of the prion protein in primates reveals a new polymorphism in codon 226 (Y226F). Biological Chemistry, 383(6):1021-1025.

Wenger, R H (2002). Cellular adaptation to hypoxia: O2-sensing protein hydroxylases, hypoxia-inducible transcription factors, and O2-regulated gene expression. FASEB Journal, 16(10):1151-1162.

Yang, H; Chiang, J-H; Fitz-Gibbon, S; Lebel, M; Sartori, Alessandro A; Jiricny, J; Slupska, M M; Miller, J H (2002). Direct interaction between uracil-DNA glycosylase and a proliferating cell nuclear antigen homolog in the crenarchaeon Pyrobaculum aerophilum. Journal of Biological Chemistry, 277(25):22271-22278.

Hubscher, U; Maga, G; Spadari, S (2002). Eukaryotic DNA polymerases. Annual Review of Biochemistry, 71:133-163.

Berger-Bächi, Brigitte; Rohrer, Susanne (2002). Factors influencing methicillin resistance in staphylococci. Archives of Microbiology, 178(3):165-171.

Breitenmoser, Roland A; Linden, Anthony; Heimgartner, Heinz (2002). Formation of 1,3-Thiazol-5(4H)-imines and 1,3-Oxazol-5(4H)-imines in Aib-Containing Thiopeptides. Helvetica Chimica Acta, 85:990-1018.

Katschinski, D M; Le, L; Heinrich, D; Wagner, K F; Hofer, T; Schindler, S G; Wenger, R H (2002). Heat induction of the unphosphorylated form of hypoxia-inducible factor-1alpha is dependent on heat shock protein-90 activity. Journal of Biological Chemistry, 277(11):9262-9267.

Alvino, E; Marra, Giancarlo; Pagani, E; Falcinelli, S; Pepponi, R; Perrera, C; Haider, R; Castiglia, D; Ferranti, G; Bonmassar, E; Jiricny, J; Zambruno, G; D'Atri, S (2002). High-frequency microsatellite instability is associated with defective DNA mismatch repair in human melanoma. Journal of Investigative Dermatology, 118(1):79-86.

Räschle, M; Dufner, P; Marra, Giancarlo; Jiricny, J (2002). Mutations within the hMLH1 and hPMS2 subunits of the human MutLalpha mismatch repair factor affect its ATPase activity, but not its ability to interact with hMutSalpha. Journal of Biological Chemistry, 277(24):21810-21820.

Brun, Kathrin A; Linden, Anthony; Heimgartner, Heinz (2002). New Optically Active 2H-Azirin-3-amines as Synthons for Enantiomerically Pure 2,2-Disubstituted Glycines: Synthesis of Synthons for Tyr(2Me) and Dopa(2Me), and Their Incorporation into Dipeptides. Helvetica Chimica Acta, 85:3422-3443.

Awad, Enas M; Elwan, Nehal M; Hassaneen, Hamdi M; Linden, Anthony; Heimgartner, Heinz (2002). New Routes to Fused Isoquinolines. Helvetica Chimica Acta, 85:320-332.

Stiehl, D P; Jelkmann, W; Wenger, R H; Hellwig-Bürgel, T (2002). Normoxic induction of the hypoxia-inducible factor 1alpha by insulin and interleukin-1beta involves the phosphatidylinositol 3-kinase pathway. FEBS Letters, 512(1-3):157-162.

Onoa, G B; Moreno, V; Freisinger, Eva; Lippert, B (2002). Pd(II)- and Pt(II)-cimetidine complexes. Crystal structure of trans-[Pt(N,S-cimetidine)2]Cl2.12H2O. Journal of Inorganic Biochemistry, 89(3-4):237-247.

Scheid, A; Wenger, R H; Schäffer, L; Camenisch, I; Distler, O; Ferenc, A; Cristina, Heidi; Ryan, H E; Johnson, R S; Wagner, K F; Stauffer, U G; Bauer, C; Gassmann, M; Meuli, M (2002). Physiologically low oxygen concentrations in fetal skin regulate hypoxia-inducible factor 1 and transforming growth factor-beta3. FASEB Journal, 16(3):411-413.

Gillet, L C J; Schärer, O D (2002). Preparation of C8-amine and acetylamine adducts of 2'-deoxyguanosine suitably protected for DNA synthesis. Organic Letters, 4(24):4205-4208.

Bienz, Stefan; Detterbeck, Richard; Ensch, Corinne; Guggisberg, Armin; Häusermann, Ursula; Meisterhans, Christian; Wendt, Barbara; Werner, Christa; Hesse, Manfred (2002). Putrescine, spermidine, spermine, and related polyamine alkaloids. In: Cordell, G A. The Alkaloids. New Yourk: Elsevier, 83-338.

Gendek, Tomasz; Mlostoń, Grzegorz; Linden, Anthony; Heimgartner, Heinz (2002). Reaction of thiocarbonyl S-methylides with acetylenic dipolarophiles and an unexpected rearrangement of the cycloadducts. Helvetica Chimica Acta, 85:451-463.

Manov, Nikolay; Tzouros, Manuel; Chesnov, Sergiy; Bigler, Laurent; Bienz, Stefan (2002). Solid-Phase Synthesis of Polyamine Spider Toxins and Correlation with the Natural Products by HPLC-MS/MS. Helvetica Chimica Acta, 85(9):2827-2846.

Mlostoń, Grzegorz; Prakash, G K Surya; Olah, George A; Heimgartner, Heinz (2002). Studies on Reactions of Thioketones with Trimethyl(trifluoromethyl)silane Catalyzed by Fluoride Ions. Helvetica Chimica Acta, 85:1644-1658.

Breitenmoser, Roland A; Heimgartner, Heinz (2002). Synthesis and Use of 2H-Azirin-3-amines as Dipeptide Synthons. Helvetica Chimica Acta, 85:885-912.

Atanassov, Plamen K; Zhou, Yuehui; Linden, Anthony; Heimgartner, Heinz (2002). Synthesis of Bis(2,4-diarylimidazol-5-yl) Diselenides from N-Benzylbenzimidoyl Isoselenocyanates. Helvetica Chimica Acta, 85:1102-1117.

Gebert, Andreas; Heimgartner, Heinz (2002). Synthesis of an Enantiomerically Pure 1,3-Thiazole-5(4H)-thione and Its Stereoselective 1,3-Dipolar Cycloaddition with an Azomethine Ylide. Helvetica Chimica Acta, 85:2073-2081.

Murer, H; Köhler, K; Lambert, G; Stange, G; Biber, J; Forster, I C (2002). The renal type IIa Na/Pi cotransporter: structure-function relationships. Cell Biochemistry and Biophysics, 36(2-3):215-220.

Kirchner, B; Reiher, M (2002). The secret of dimethyl sulfoxide-water mixtures. A quantum chemical study of 1DMSO-nwater clusters. Journal of the American Chemical Society, 124(21):6206-6215.

Geacintov, N E; Broyde, S; Buterin, T; Naegeli, H; Wu, M; Yan, S; Patel, D J (2002). Thermodynamic and structural factors in the removal of bulky DNA adducts by the nucleotide excision repair machinery. Biopolymers, 65(3):202-210.

Mlostoń, Grzegorz; Heimgartner, Heinz (2002). Thiocarbonyl Ylides. In: Padwa, A; Pearson, W H. Synthetic Applications of 1,3-Dipolar Cycloaddition Chemistry Toward Heterocycles and Natural Products. New York: John Wiley & Sons, Inc., 315-360.

Seger, R A (2002). Treatment of chronic granulomatous disease with myeloablative conditioning and an unmodified hemopoietic allograft: a survey of the European experience, 1985-2000. Blood, 100(13):4344-4350.

Mlostoń, Grzegorz; Urbaniak, Katarzyna; Linden, Anthony; Heimgartner, Heinz (2002). Unexpected Formation of Dimethylthioketene Cycloadducts in the Reaction of 1,3-Diphenylaziridine-2,2-dicarboxylate with Cyclobutanethione Derivatives. Helvetica Chimica Acta, 85:2644-2656.