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2021

Lieberwirth, Johann Kaspar; Joset, Pascal; Heinze, Anja; Hentschel, Julia; Stein, Anja; Iannaccone, Antonella; Steindl, Katharina; Kuechler, Alma; Abou Jamra, Rami; Berger, Wolfgang (2021). Bi-allelic loss of function variants in SLC30A5 as cause of perinatal lethal cardiomyopathy. European Journal of Human Genetics:Epub ahead of print.

Qu, Zhishuai; Forster, Dominik; Bruni, Estelle P; Frantal, Daniela; Kammerlander, Barbara; Nachbaur, Laura; Pitsch, Gianna; Posch, Thomas; Pröschold, Thomas; Teubner, Katrin; Sonntag, Bettina; Stoeck, Thorsten (2021). Aquatic food webs in deep temperate lakes: Key species establish through their autecological versatility. Molecular Ecology, 30(4):1053-1071.

Guberina, Maja; Sak, Ali; Pöttgen, Christoph; Tinhofer-Keilholz, Ingeborg; Budach, Volker; Balermpas, Panagiotis; Von der Grün, Jens; Rödel, Claus Michael; Gkika, Eleni; Grosu, Anca-Ligia; Abdollahi, Amir; Debus, Jürgen; Belka, Claus; Pigorsch, Steffi; Combs, Stephani E; Mönnich, David; Zips, Daniel; De-Colle, Chiara; Welz, Stefan; Linge, Annett; Lohaus, Fabian; Baretton, Gustavo; Gauler, Thomas; Baumann, Michael; Krause, Mechthild; Schuler, Martin; Bankfalvi, Agnes; Höing, Benedikt; Lang, Stephan; Stuschke, Martin (2021). ERCC2 gene single-nucleotide polymorphism as a prognostic factor for locally advanced head and neck carcinomas after definitive cisplatin-based radiochemotherapy. Pharmacogenomics Journal, 21(1):37-46.

Pretz, Dominik; Le Foll, Christelle; Rizwan, Mohammed Z; Lutz, Thomas A; Tups, Alexander (2021). Hyperleptinemia as a contributing factor for the impairment of glucose intolerance in obesity. FASEB Journal, 35(2):e21216.

Daryadel, Arezoo; Ruiz, Pedro A; Gehring, Nicole; Stojanovic, Dragana; Ugrica, Marko; Bettoni, Carla; Sabrautzki, Sibylle; Pastor-Arroyo, Eva-Maria; Frey-Wagner, Isabelle; Lorenz-Depiereux, Bettina; Strom, Tim M; de Angelis, Martin Hrabě; Rogler, Gerhard; Wagner, Carsten A; Rubio-Aliaga, Isabel (2021). Systemic Jak1 activation provokes hepatic inflammation and imbalanced FGF23 production and cleavage. FASEB Journal, 35(2):e21302.

Hussung, Saskia; Akhoundova, Dilara; Hipp, Julian; Follo, Marie; Klar, Rhena F U; Philipp, Ulrike; Scherer, Florian; von Bubnoff, Nikolas; Duyster, Justus; Boerries, Melanie; Wittel, Uwe; Fritsch, Ralph M (2021). Longitudinal analysis of cell-free mutated KRAS and CA 19-9 predicts survival following curative resection of pancreatic cancer. BMC Cancer, 21:49.

Keles, Esin; Malama, Eleni; Bozukova, Siyka; Siuda, Mathias; Wyck, Sarah; Witschi, Ulrich; Bauersachs, Stefan; Bollwein, Heinrich (2021). The micro-RNA content of unsorted cryopreserved bovine sperm and its relation to the fertility of sperm after sex-sorting. BMC Genomics, 22(1):30.

Haug, Patricia; Koller, Samuel; Maggi, Jordi; Lang, Elena; Feil, Silke; Wlodarczyk, Agnès; Bähr, Luzy; Steindl, Katharina; Rohrbach, Marianne; Gerth-Kahlert, Christina; Berger, Wolfgang (2021). Whole Exome Sequencing in Coloboma/Microphthalmia: Identification of Novel and Recurrent Variants in Seven Genes. Genes, 12(1):E65.

Sticco, Matthew J; Peña Palomino, Perla A; Lukacsovich, David; Thompson, Brianna L; Földy, Csaba; Ressl, Susanne; Martinelli, David C (2021). C1QL3 promotes cell‐cell adhesion by mediating complex formation between ADGRB3/BAI3 and neuronal pentraxins. FASEB Journal, 35(1):e21194.

Hörster, Friederike; Tuncel, Ali Tunç; Gleich, Florian; Plessl, Tanja; Froese, Sean D; Garbade, Sven F; Kölker, Stefan; Baumgartner, Matthias R; Additional Contributors from E-IMD (2021). Delineating the clinical spectrum of isolated methylmalonic acidurias: cblA and mut. Journal of Inherited Metabolic Disease, 44(1):193-214.

Tayyrov, Annageldi; Schnetzler, Michèle; Gillis-Germitsch, Nina; Schnyder, Manuela (2021). Genetic diversity of the cardiopulmonary canid nematode Angiostrongylus vasorum within and between rural and urban fox populations. Infection, Genetics and Evolution, 87:104618.

Dimitrov, Bianca; Molema, Femke; Williams, Monique; Schmiesing, Jessica; Mühlhausen, Chris; Baumgartner, Matthias R; Schumann, Anke; Kölker, Stefan (2021). Organic acidurias: Major gaps, new challenges, and a yet unfulfilled promise. Journal of Inherited Metabolic Disease, 44(1):9-21.

Demange, Perline A; Malanchini, Margherita; Mallard, Travis T; Biroli, Pietro; Cox, Simon R; Grotzinger, Andrew D; Tucker-Drob, Elliot M; Abdellaoui, Abdel; Arseneault, Louise; van Bergen, Elsje; Boomsma, Dorret I; Caspi, Avshalom; Corcoran, David L; Domingue, Benjamin W; Harris, Kathleen Mullan; Ip, Hill F; Mitchell, Colter; Moffitt, Terrie E; Poulton, Richie; Prinz, Joseph A; Sugden, Karen; Wertz, Jasmin; Williams, Benjamin S; de Zeeuw, Eveline L; Belsky, Daniel W; Harden, K Paige; Nivard, Michel G (2021). Investigating the genetic architecture of noncognitive skills using GWAS-by-subtraction. Nature Genetics, 53(1):35-44.

2020

Charmpi, Konstantina; Guo, Tiannan; Zhong, Qing; Wagner, Ulrich; Sun, Rui; Toussaint, Nora C; Fritz, Christine E; Yuan, Chunhui; Chen, Hao; Rupp, Niels J; Christiansen, Ailsa; Rutishauser, Dorothea; Rüschoff, Jan H; Fankhauser, Christian; Saba, Karim; Poyet, Cedric; Hermanns, Thomas; Oehl, Kathrin; Moore, Ariane L; Beisel, Christian; Calzone, Laurence; Martignetti, Loredana; Zhang, Qiushi; Zhu, Yi; Martínez, María Rodríguez; Manica, Matteo; Haffner, Michael C; Aebersold, Ruedi; Wild, Peter J; Beyer, Andreas (2020). Convergent network effects along the axis of gene expression during prostate cancer progression. Genome Biology, 21:302.

Huemer, Markus; Mairpady Shambat, Srikanth; Brugger, Silvio D; Zinkernagel, Annelies S (2020). Antibiotic resistance and persistence—Implications for human health and treatment perspectives. EMBO Reports, 21(12):0.

Tiberi, Simone; Robinson, Mark D (2020). BANDITS: Bayesian differential splicing accounting for sample-to-sample variability and mapping uncertainty. Genome Biology, 21:69.

Kartal, Önder; Schmid, Marc W; Grossniklaus, Ueli (2020). Cell type-specific genome scans of DNA methylation divergence indicate an important role for transposable elements. Genome Biology, 21:172.

Koenen, Erik J M; Kidner, Catherine; de Souza, Élvia R; Simon, Marcelo F; Iganci, João R; Nicholls, James A; Brown, Gillian K; de Queiroz, Luciano P; Luckow, Melissa; Lewis, Gwilym P; Pennington, R Toby; Hughes, Colin E (2020). Hybrid capture of 964 nuclear genes resolves evolutionary relationships in the mimosoid legumes and reveals the polytomous origins of a large pantropical radiation. American Journal of Botany, 107(12):1710-1735.

Fowler, Anna; Galson, Jacob D; Trück, Johannes; Kelly, Dominic F; Lunter, Gerton (2020). Inferring B cell specificity for vaccines using a Bayesian mixture model. BMC Genomics, 21:176.

Martens, Helge; Hennies, Imke; Getwan, Maike; Christians, Anne; Weiss, Anna-Carina; Brand, Frank; Gjerstad, Ann Christin; Christians, Arne; Gucev, Zoran; Geffers, Robert; Seeman, Tomáš; Kispert, Andreas; Tasic, Velibor; Bjerre, Anna; Lienkamp, Soeren S; Haffner, Dieter; Weber, Ruthild G (2020). Rare heterozygous GDF6 variants in patients with renal anomalies. European Journal of Human Genetics, 28(12):1681-1693.

Holderegger, Rolf; Schmidt, Benedikt R; Grünig, Christoph; Meier, Robert; Csencsics, Daniela; Gassner, Martin; Rellstab, Christian; Stapfer, André (2020). Ready-to-use workflows for the implementation of genetic tools in conservation management. Conservation Genetics Resources, 12(4):691-700.

Antoine, Daniel James; Williams, Dominic P; Kipar, Anja; Laverty, Hugh; Park, B Kevin (2020). Retraction Note: Diet restriction inhibits apoptosis and HMGB1 oxidation and promotes inflammatory cell recruitment during acetaminophen hepatotoxicity. Molecular Medicine, 26(1):130.

Thomas, Christoph; Aller, Stephen G; Beis, Konstantinos; Carpenter, Elisabeth P; et al; Martinoia, Enrico (2020). Structural and functional diversity calls for a new classification of ABC transporters. FEBS letters, 594(23):3767-3775.

Primo, Pasquale; Meccariello, Angela; Inghilterra, Maria Grazia; Gravina, Andrea; Del Corsano, Giuseppe; Volpe, Gennaro; Sollazzo, Germano; Aceto, Serena; Robinson, Mark D; Salvemini, Marco; Saccone, Giuseppe (2020). Targeting the autosomal Ceratitis capitata transformer gene using Cas9 or dCas9 to masculinize XX individuals without inducing mutations. BMC Genetics, 21(Suppl 2):150.

Feller, Anita; Matthes, Katarina L; Bordoni, Andrea; Bouchardy, Christine; Bulliard, Jean-Luc; Herrmann, Christian; Konzelmann, Isabelle; Maspoli, Manuela; Mousavi, Mohsen; Rohrmann, Sabine; Staehelin, Katharina; Arndt, Volker (2020). The relative risk of second primary cancers in Switzerland: a population-based retrospective cohort study. BMC Cancer, 20:51.

Hecht, Markus; Hahn, Dennis; Wolber, Philipp; Hautmann, Matthias G; Reichert, Dietmar; Weniger, Steffi; Belka, Claus; Bergmann, Tobias; Göhler, Thomas; Welslau, Manfred; Große-Thie, Christina; Guntinas-Lichius, Orlando; von der Grün, Jens; Balermpas, Panagiotis; Orlowski, Katrin; Messinger, Diethelm; Stenzel, Karsten G; Fietkau, Rainer (2020). Treatment response lowers tumor symptom burden in recurrent and/or metastatic head and neck cancer. BMC Cancer, 20(933):1-11.

Lopes, Patricia C; König, Barbara (2020). Wild mice with different social network sizes vary in brain gene expression. BMC Genomics, 21:506.

Germain, Pierre-Luc; Sonrel, Anthony; Robinson, Mark D (2020). pipeComp, a general framework for the evaluation of computational pipelines, reveals performant single cell RNA-seq preprocessing tools. Genome Biology, 21(1):227.

Caduff, Nicole; McHugh, Donal; Murer, Anita; Rämer, Patrick; Raykova, Ana; Landtwing, Vanessa; Rieble, Lisa; Keller, Christian W; Prummer, Michael; Hoffmann, Laurent; Lam, Janice K P; Chiang, Alan K S; Raulf, Friedrich; Azzi, Tarik; Berger, Christoph; Rubic-Schneider, Tina; Traggiai, Elisabetta; Lünemann, Jan D; Kammüller, Michael; Münz, Christian (2020). Correction: Immunosuppressive FK506 treatment leads to more frequent EBV-associated lymphoproliferative disease in humanized mice. PLoS Pathogens, 16(12):e1009167.

Roifman, Maian; Niles, Kirsten M; MacNeil, Lauren; Blaser, Susan; Noor, Abdul; Godoy, Ruth; van Mieghem, Tim; Ryan, Greg; Seaward, Gareth; Sondheimer, Neal; Mercimek-Andrews, Saadet; Schulze, Andreas; Hewson, Stacy; Ovadia, Adi; Chitayat, David; Morgen, Eric K; Hojilla, Carlo; Kolomietz, Elena; Watkins, Nicholas; Häberle, Johannes; Shannon, Patrick (2020). Homozygous GLUL deletion is embryonically viable and leads to glutamine synthetase deficiency. Clinical Genetics, 98(6):613-619.

San Roman, Magdalena; Wagner, Andreas (2020). Acetate and glycerol are not uniquely suited for the evolution of cross-feeding in E. coli. PLoS Computational Biology, 16(11):e1008433.

Bordignon, Enrica; Seeger, Markus A; Galazzo, Laura; Meier, Gianmarco (2020). From in vitro towards in situ: structure-based investigation of ABC exporters by electron paramagnetic resonance spectroscopy. FEBS letters, 594:3839-3856.

Wambui, Joseph; Cernela, Nicole; Stevens, Marc J A; Ghielmetti, Giovanni; Stephan, Roger (2020). Draft genome sequences of two clostridium algidicarnis strains isolated from meat juice samples of chilled vacuum-packed lamb meat. Microbiology Resource Announcements, 9(45):e00983-20.

Wyler, Michele; Stritt, Christoph; Walser, Jean-Claude; Baroux, Célia; Roulin, Anne C (2020). Impact of transposable elements on methylation and gene expression across natural accessions of Brachypodium distachyon. Genome Biology and Evolution, 12(11):1994-2001.

Sokolowska, Milena (2020). Outsmarting SARS-CoV-2 by empowering a decoy ACE2. Signal Transduction and Targeted Therapy, 5(1):260.

Rellstab, Christian; Zoller, Stefan; Sailer, Christian; Tedder, Andrew; Gugerli, Felix; Shimizu, Kentaro K; Holderegger, Rolf; Widmer, Alex; Fischer, Martin C (2020). Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae species. Molecular Ecology, 29(22):4350-4365.

Jawaid, Ali; Jehle, Katherina-Lynn; Mansuy, Isabelle M (2020). Impact of Parental Exposure on Offspring Health in Humans. Trends in Genetics : Tig:Epub ahead of print.

Picart-Picolo, Ariadna; Grob, Stefan; Picault, Nathalie; Franek, Michal; Llauro, Christel; Halter, Thierry; Maier, Tom R; Jobet, Edouard; Descombin, Julie; Zhang, Panpan; Paramasivan, Vijayapalani; Baum, Thomas J; Navarro, Lionel; Dvořáčková, Martina; Mirouze, Marie; Pontvianne, Frédéric (2020). Large tandem duplications affect gene expression, 3D organization, and plant–pathogen response. Genome Research, 30(11):1583-1592.

Epting, Daniel; Senaratne, Lokuliyange D S; Ott, Elisabeth; Holmgren, Asbjørn; Sumathipala, Dulika; et al; Lienkamp, Soeren S (2020). Loss of CBY1 results in a ciliopathy characterized by features of Joubert syndrome. Human Mutation, 41(12):2179-2194.

Koch, Eva L; Sbilordo, Sonja H; Guillaume, Frédéric (2020). Genetic variance in fitness and its cross-sex covariance predict adaptation during experimental evolution. Evolution, 74(12):2725-2740.

Wyvekens, Nicolas; Valtcheva, Nadejda; Mischo, Axel; Helmchen, Birgit; Hermanns, Thomas; Choschzick, Matthias; Hötker, Andreas M; Rauch, Anita; Mühleisen, Beda; Akhoundova, Dilara; Weber, Achim; Moch, Holger; Rupp, Niels J (2020). Novel morphological and genetic features of fumarate hydratase deficient renal cell carcinoma in HLRCC syndrome patients with a tailored therapeutic approach. Genes, Chromosomes and Cancer, 59(11):611-619.

Bachmann, Judith C; Van Buskirk, Josh (2020). Adaptation to elevation but limited local adaptation in an amphibian. Evolution:Epub ahead of print.

Schmutzer, Michael; Wagner, Andreas (2020). Gene expression noise can promote the fixation of beneficial mutations in fluctuating environments. PLoS Computational Biology, 16(10):e1007727.

Lewinson, Oded; Orelle, Cédric; Seeger, Markus A (2020). Structures of ABC transporters: handle with care. FEBS letters, 594(23):3799-3814.

Arzate-Mejía, Rodrigo G; Lottenbach, Zuzanna; Schindler, Vincent; Jawaid, Ali; Mansuy, Isabelle M (2020). Long-Term Impact of Social Isolation and Molecular Underpinnings. Frontiers in Genetics, 11:589621.

Wambui, Joseph; Cernela, Nicole; Stevens, Marc J A; Corti, Sabrina; Stephan, Roger (2020). Draft genome sequences of two phylogenetically distinct clostridium gasigenes strains, CM001 and CM004, isolated from chilled vacuum-packed meat. Microbiology Resource Announcements, 9(42):e01128-20.

Sun, Jianqiang; Shimizu-Inatsugi, Rie; Hofhuis, Hugo; Shimizu, Kentaro; Hay, Angela; Shimizu, Kentaro K; Sese, Jun (2020). A Recently Formed Triploid Cardamine insueta Inherits Leaf Vivipary and Submergence Tolerance Traits of Parents. Frontiers in Genetics, 11:567262.

Koch, Eva L; Guillaume, Frederic (2020). Restoring ancestral phenotypes is a general pattern in gene expression evolution during adaptation to new environments in Tribolium castaneum. Molecular Ecology, 29(20):3938-3953.

Kottwitz, Jan; Bruno, Katelyn A; Berg, Jan; Salomon, Gary R; Fairweather, DeLisa; Elhassan, Mawahib; Baltensperger, Nora; Kissel, Christine K; Lovrinovic, Marina; Baltensweiler, Andrea; Schmied, Christian; Templin, Christian; Lima, Joao A C; Landmesser, Ulf; Lüscher, Thomas F; Manka, Robert; Heidecker, Bettina (2020). Myoglobin for Detection of High-Risk Patients with Acute Myocarditis. Journal of Cardiovascular Translational Research, 13(5):853-863.

Henco, Lara; Diaconescu, Andreea O; Lahnakoski, Juha M; Brandi, Marie-Luise; Hörmann, Sophia; Hennings, Johannes; Hasan, Alkomiet; Papazova, Irina; Strube, Wolfgang; Bolis, Dimitris; Schilbach, Leonhard; Mathys, Christoph (2020). Aberrant computational mechanisms of social learning and decision-making in schizophrenia and borderline personality disorder. PLoS Computational Biology, 16(9):e1008162.

Paape, Timothy; Akiyama, Reiko; Cereghetti, Teo; Onda, Yoshihiko; Hirao, Akira S; Kenta, Tanaka; Shimizu, Kentaro K (2020). Experimental and Field Data Support Range Expansion in an Allopolyploid Arabidopsis Owing to Parental Legacy of Heavy Metal Hyperaccumulation. Frontiers in Genetics, 11:1162.

Winkler, Johannes; Lukovic, Dominika; Mester-Tonczar, Julia; Zlabinger, Katrin; Gugerell, Alfred; Pavo, Noemi; Jakab, András; Szankai, Zsuzsanna; Traxler, Denise; Müller, Claudia; Spannbauer, Andreas; Riesenhuber, Martin; Hašimbegović, Ena; Dawkins, James; Zimmermann, Matthias; Ankersmit, Hendrik J; Marbán, Eduardo; Gyöngyösi, Mariann (2020). Quantitative hybrid cardiac [18F] FDG-PET-MRI images for assessment of cardiac repair by preconditioned cardiosphere-derived cells. Molecular Therapy - Methods & Clinical Development, 18:354-366.

Giger, Sonja; Kovtonyuk, Larisa V; Utz, Sebastian G; Ramosaj, Mergim; Kovacs, Werner J; Schmid, Emanuel; Ioannidis, Vassilios; Greter, Melanie; Manz, Markus G; Lutolf, Matthias P; Jessberger, Sebastian; Knobloch, Marlen (2020). A single metabolite which modulates lipid metabolism alters hematopoietic stem/progenitor cell behavior and promotes lymphoid reconstitution. Stem Cell Reports, 15(3):566-576.

Hettmer, Simone; Dachy, Guillaume; Seitz, Guido; Agaimy, Abbas; Duncan, Catriona; Jongmans, Marjolijn; Hirsch, Steffen; Kventsel, Iris; Kordes, Uwe; de Krijger, Ronald R; Metzler, Markus; Michaeli, Orli; Nemes, Karolina; Poluha, Anna; Ripperger, Tim; Russo, Alexandra; Smetsers, Stephanie; Sparber-Sauer, Monika; Stutz, Eveline; Bourdeaut, Franck; Kratz, Christian P; Demoulin, Jean-Baptiste (2020). Genetic testing and surveillance in infantile myofibromatosis: a report from the SIOPE Host Genome Working Group. Familial cancer:Epub ahead of print.

Nguyen, Scott Van; Muthappa, Dechamma Mundanda; Eshwar, Athmanya K; Buckley, James F; Murphy, Brenda P; Stephan, Roger; Lehner, Angelika; Fanning, Séamus (2020). Comparative genomic insights into Yersinia hibernica – a commonly misidentified Yersinia enterocolitica-like organism. Microbial genomics, 6(9):mgen000411.

Kapun, Martin; Barrón, Maite G; Staubach, Fabian; Obbard, Darren J; Wiberg, R Axel W; Vieira, Jorge; Goubert, Clément; Rota-Stabelli, Omar; Kankare, Maaria; Bogaerts-Márquez, María; Haudry, Annabelle; Waidele, Lena; Kozeretska, Iryna; Pasyukova, Elena G; Loeschcke, Volker; Pascual, Marta; Vieira, Cristina P; Serga, Svitlana; Montchamp-Moreau, Catherine; Abbott, Jessica; Gibert, Patricia; Porcelli, Damiano; Posnien, Nico; Sánchez-Gracia, Alejandro; Grath, Sonja; Sucena, Élio; Bergland, Alan O; Guerreiro, Maria Pilar Garcia; Onder, Banu Sebnem; Argyridou, Eliza (2020). Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA Viruses. Molecular Biology and Evolution, 37(9):2661-2678.

Mathis, Déborah; Beese, Karin; Rüegg, Carmen; Plecko, Barbara; Hersberger, Martin (2020). LC‐MS / MS method for the differential diagnosis of treatable early onset inherited metabolic epilepsies. Journal of Inherited Metabolic Disease, 43(5):1102-1111.

Quilodrán, Claudio S; Nussberger, Beatrice; Macdonald, David W; Montoya‐Burgos, Juan I; Currat, Mathias (2020). Projecting introgression from domestic cats into European wildcats in the Swiss Jura. Evolutionary Applications, 13(8):2101-2112.

Lindner, Stefan; Keller, Bettina; Singh, Simrat P; Hasenkamp, Zsuzsanna; Jung, Esther; Müller, Marion C; Bourras, Salim; Keller, Beat (2020). Single residues in the LRR domain of the wheat PM3A immune receptor can control the strength and the spectrum of the immune response. The Plant Journal, 104(1):200-214.

Morava, Eva; Baumgartner, Matthias; Patterson, Marc; Peters, Verena; Rahman, Shamima (2020). Newborn screening: To WES or not to WES, that is the question. Journal of Inherited Metabolic Disease, 43(5):904-905.

Stevens, Marc J A; Johler, Sophia (2020). Draft genome sequence of CH_213, a highly Cytotoxic Bacillus cytotoxicus strain isolated from mashed potatoes. Microbiology Resource Announcements, 9(35):e00836-20.

Cao, Xuanye; Wolf, Annika; Kim, Sung-Eun; Cabrera, Robert M; Wlodarczyk, Bogdan J; Zhu, Huiping; Parker, Margaret; Lin, Ying; Steele, John W; Han, Xiao; Ramaekers, Vincent T; Steinfeld, Robert; Finnell, Richard H; Lei, Yunping (2020). CIC de novo loss of function variants contribute to cerebral folate deficiency by downregulating FOLR1 expression. Journal of Medical Genetics:Epub ahead of print.

Wolfrum, Nina (2020). Infectious laryngotracheitis: an update on current approaches for prevention of an old disease. Journal of Animal Science, 98(Supplement):S27-S35.

Wambui, Joseph; Cernela, Nicole; Stevens, Marc J A; Stephan, Roger (2020). Draft genome sequence of Clostridium estertheticum CEST001, belonging to a novel subspecies of C. estertheticum, isolated from chilled vacuum-packed lamb meat imported to Switzerland. Microbiology Resource Announcements, 9(33):e00806-20.

Schweizer, Gabriel; Wagner, Andreas (2020). Genotype networks of 80 quantitative Arabidopsis thaliana phenotypes reveal phenotypic evolvability despite pervasive epistasis. PLoS Computational Biology, 16(8):e1008082.

Stevens, Marc J A; Johler, Sophia (2020). Draft genome sequence of CH_48, a highly cytotoxic Bacillus thuringiensis strain isolated from rosemary at the retail level. Microbiology Resource Announcements, 9(32):e00751-20.

Rainey, Michael D; Quinlan, Aisling; Cazzaniga, Chiara; Mijic, Sofija; Martella, Oliviano; Krietsch, Jana; Göder, Anja; Lopes, Massimo; Santocanale, Corrado (2020). CDC7 kinase promotes MRE11 fork processing, modulating fork speed and chromosomal breakage. EMBO Reports, 21(8):e48920.

Asadollahi, Reza; Britschgi, Christian; Joset, Pascal; Oneda, Beatrice; Schindler, Detlev; Meier, Urs R; Rauch, Anita (2020). Severe reaction to radiotherapy provoked by hypomorphic germline mutations in ATM (ataxia-telangiectasia mutated gene). Molecular Genetics & Genomic Medicine:e1409.

Gu, Shaohua; Wei, Zhong; Shao, Zhengying; Friman, Ville-Petri; Cao, Kehao; Yang, Tianjie; Kramer, Jos; Wang, Xiaofang; Li, Mei; Mei, Xinlan; Xu, Yangchun; Shen, Qirong; Kümmerli, Rolf; Jousset, Alexandre (2020). Competition for iron drives phytopathogen control by natural rhizosphere microbiomes. Nature Microbiology, 5(8):1002-1010.

Jullien, Pauline E; Grob, Stefan; Marchais, Antonin; Pumplin, Nathan; Chevalier, Clement; Bonnet, Diane M V; Otto, Caroline; Schott, Gregory; Voinnet, Olivier (2020). Functional characterization of Arabidopsis ARGONAUTE 3 in reproductive tissues. The Plant Journal, 103(5):1796-1809.

Tai, Yee Kit; Ng, Charmaine; Purnamawati, Kristy; Yap, Jasmine Lye Yee; Yin, Jocelyn Naixin; Wong, Craig; Patel, Bharati Kadamb; Soong, Poh Loong; Pelczar, Pawel; Fröhlich, Jürg; Beyer, Christian; Fong, Charlene Hui Hua; Ramanan, Sharanya; Casarosa, Marco; Cerrato, Carmine Pasquale; Foo, Zi Ling; Pannir Selvan, Rina Malathi; Grishina, Elina; Degirmenci, Ufuk; Toh, Shi Jie; Richards, Pete J; Mirsaidi, Ali; Wuertz‐Kozak, Karin; Chong, Suet Yen; Ferguson, Stephen J; Aguzzi, Adriano; et al (2020). Magnetic fields modulate metabolism and gut microbiome in correlation with Pgc‐1α expression: Follow‐up to an in vitro magnetic mitohormetic study. FASEB Journal, 34(8):11143-11167.

Mahendiran, Thabo; Nanchen, David; Gencer, Baris; Meier, David; Klingenberg, Roland; Räber, Lorenz; Carballo, David; Matter, Christian M; Lüscher, Thomas F; Windecker, Stephan; Mach, François; Rodondi, Nicolas; Muller, Olivier; Fournier, Stephane (2020). Prognosis of Patients with Chronic and Hospital-Acquired Anaemia After Acute Coronary Syndromes. Journal of Cardiovascular Translational Research, 13(4):618-628.

Kappler, Katharina; Hennet, Thierry (2020). Emergence and significance of carbohydrate-specific antibodies. Genes and immunity, 21(4):224-239.

Rashka, Charif; Hergalant, Sébastien; Dreumont, Natacha; Oussalah, Abderrahim; Camadro, Jean-Michel; Marchand, Virginie; Hassan, Ziad; Baumgartner, Matthias R; Rosenblatt, David S; Feillet, François; Guéant, Jean-Louis; Flayac, Justine; Coelho, David (2020). Analysis of fibroblasts from patients with cblC and cblG genetic defects of cobalamin metabolism reveals global dysregulation of alternative splicing. Human Molecular Genetics, 29(12):1969-1985.

Umlauf, David; Sobecki, Michal; Crabbe, Laure (2020). Methyl Adenine Identification (MadID): High-Resolution Detection of Protein-DNA Interactions. In: Hancock, Ronald. The Nucleus. New York: Springer, 123-138.

Nemeth, Johannes; Olson, Gregory S; Rothchild, Alissa C; Jahn, Ana N; Mai, Dat; Duffy, Fergal J; Delahaye, Jared L; Srivatsan, Sanjay; Plumlee, Courtney R; Urdahl, Kevin B; Gold, Elizabeth S; Aderem, Alan; Diercks, Alan H (2020). Contained Mycobacterium tuberculosis infection induces concomitant and heterologous protection. PLoS Pathogens, 16(7):e1008655.

Wambui, Joseph; Morach, Marina; Cernela, Nicole; Stevens, Marc J A; Ghielmetti, Giovanni; Stephan, Roger (2020). Draft genome sequence of Psychrobacter okhotskensis strain 5179-1A, isolated from a raw cured ham storage crate. Microbiology Resource Announcements, 9(29):e00682-20.

Maggi, Jordi; Roberts, Lisa; Koller, Samuel; Rebello, George; Berger, Wolfgang; Ramesar, Rajkumar (2020). De Novo Assembly-Based Analysis of RPGR Exon ORF15 in an Indigenous African Cohort Overcomes Limitations of a Standard Next-Generation Sequencing (NGS) Data Analysis Pipeline. Genes, 11(7):800.

Stücheli, Pascal; Sieber, Simon; Fuchs, David W; Scheller, Leo; Strittmatter, Tobias; Saxena, Pratik; Gademann, Karl; Fussenegger, Martin (2020). Genetically encoded betaxanthin-based small-molecular fluorescent reporter for mammalian cells. Nucleic Acids Research, 48(12):e67-e67.

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Letko, A; Ammann, B; Jagannathan, V; Henkel, J; Leuthard, F; Schelling, Claude; Carneiro, M; Drögemüller, C; Leeb, Tosso (2020). A deletion spanning the promoter and first exon of the hair cycle‐specific ASIP transcript isoform in black and tan rabbits. Animal Genetics, 51(1):137-140.

Denninger, T. M.; Schwarm, A; Dohme-Meier, F; Münger, A; Bapst, B; Wegmann, S; Grandl, F; Vanlierde, A; Sorg, D; Ortmann, S; Clauss, Marcus; Kreuzer, Michael (2020). Accuracy of methane emissions predicted from milk mid-infrared spectra and measured by laser methane detectors in Brown Swiss dairy cows. Journal of Dairy Science, 103(2):2024-2039.

Komarynets, Olga; Chassot, Alexandra; Bernabeu, Eva; Czogalla, Jan; Roth, Isabelle; Liaudet, Nicolas; Prodon, François; Loffing, Johannes; Feraille, Eric (2020). Aldosterone controls primary cilium length and cell size in renal collecting duct principal cells. FASEB Journal, 34(2):2625-2640.

Marazza, Alessandro; Galli, Carmela; Fasana, Elisa; Sgrignani, Jacopo; Burda, Patricie; Fassi, Enrico M A; Baumgartner, Matthias; Cavalli, Andrea; Molinari, Maurizio (2020). Endoplasmic Reticulum and Lysosomal Quality Control of Four Nonsense Mutants of Iduronate 2-Sulfatase Linked to Hunter's Syndrome. DNA and cell biology, 39(2):226-234.

Baur, Julian; Giesen, Athene; Rohner, Patrick T; Blanckenhorn, Wolf U; Schäfer, Martin A (2020). Exaggerated male forelegs are not more differentiated than wing morphology in two widespread sister species of black scavenger flies. Journal of Zoological Systematics and Evolutionary Research, 58(1):159-173.

Oliveira, João P; Nowak, Albina; Barbey, Frédéric; Torres, Márcia; Nunes, José P; Teixeira-E-Costa, Fernando; Carvalho, Fernanda; Sampaio, Susana; Tavares, Isabel; Pereira, Odete; Soares, Ana L; Carmona, Cátia; Cardoso, Maria-Teresa; Jurca-Simina, Iulia E; Spada, Marco; Ferreira, Susana; Germain, Dominique P (2020). Fabry disease caused by the GLA p.Phe113Leu (p.F113L) variant: Natural history in males. European Journal of Medical Genetics, 63(2):103703.

Sulser, Pascale; Pickel, Christina; Günter, Julia; Leissing, Thomas M; Crean, Daniel; Schofield, Christopher J; Wenger, Roland H; Scholz, Carsten C (2020). HIF hydroxylase inhibitors decrease cellular oxygen consumption depending on their selectivity. FASEB Journal, 34(2):2344-2358.

Aubry, Sylvain; Fankhauser, Niklaus; Ovinnikov, Serguei; Pružinská, Adriana; Stirnemann, Marina; Zienkiewicz, Krzysztof; Herrfurth, Cornelia; Feussner, Ivo; Hörtensteiner, Stefan (2020). Pheophorbide a may regulate Jasmonate signaling during dark-induced senescence. Plant Physiology, 182(2):776-791.

Dizin, Eva; Olivier, Valérie; Maire, Charline; Komarynets, Olga; Sassi, Ali; Roth, Isabelle; Loffing, Johannes; de Seigneux, Sophie; Maillard, Marc; Rutkowski, Joseph M; Edwards, Aurélie; Feraille, Eric (2020). Time‐course of sodium transport along the nephron in nephrotic syndrome: the role of potassium. FASEB Journal, 34(2):2408-2424.

Lang, Brian M; Kuipers, Jack; Misselwitz, Benjamin; Beerenwinkel, Niko (2020). Predicting colorectal cancer risk from adenoma detection via a two-type branching process model. PLoS Computational Biology, 16(2):e1007552.

Lausch, C K; Lorch, A; Giertzuch, S; Rieger, A; Knubben-Schweizer, G; Trefz, F M (2020). Prognostic relevance of pre- and postoperative plasma l-lactate measurements in calves with acute abdominal emergencies. Journal of Dairy Science, 103(2):1856-1865.

Bicker, Anne; Nauth, Theresa; Gerst, Daniela; Aboouf, Mostafa Ahmed; Fandrey, Joachim; Kristiansen, Glen; Gorr, Thomas A; Hankeln, Thomas (2020). The role of myoglobin in epithelial cancers: Insights from transcriptomics. International journal of molecular medicine, 45(2):385-400.

Klee, Katrin; Storti, Federica; Maggi, Jordi; Todorova, Vyara; Karademir, Duygu; Berger, Wolfgang; Samardzija, Marijana; Grimm, Christian (2020). The expression of Decidual Protein induced by Progesterone (DEPP) is controlled by three distal consensus Hypoxia Responsive Element (HRE) in Hypoxic Retinal Epithelial cells. Genes, 11(1):E111.

Agarwal, P; Isringhausen, S; Li, H; Paterson, A J; He, J; Gomariz, Á; Nagasawa, T; Nombela-Arrieta, C; Bhatia, R (2020). Erratum: Mesenchymal Niche-Specific Expression of Cxcl12 Controls Quiescence of Treatment-Resistant Leukemia Stem Cells (Cell Stem Cell (2019) 24(5) (769–784.e6), (S1934590919300700), (10.1016/j.stem.2019.02.018)). Cell Stem Cell, 26(1):123.

Ismail, Sascha A; Kokko, Hanna (2020). An analysis of mating biases in trees. Molecular Ecology, 29(1):184-198.

Lutz, Thomas A (2020). An overview of rodent models of obesity and Type 2 diabetes. In: King, Aileen J F. Animal Models of Diabetes. New York: Springer, 11-24.

Pagella, Pierfrancesco; Mitsiadis, Thimios A (2020). Analysis of Tooth Innervation in Microfluidic Coculture Devices. In: Kioussi, Chrissa. Stem Cells and Tissue : Repair Methods and Protocols. New York: Springer, 99-106.

Atac, David; Koller, Samuel; Hanson, James V M; Feil, Silke; Tiwari, Amit; Bahr, Angela; Baehr, Luzy; Magyar, István; Kottke, Raimund; Gerth-Kahlert, Christina; Berger, Wolfgang (2020). Atonal homolog 7 (ATOH7) loss-of-function mutations in predominant bilateral optic nerve hypoplasia. Human Molecular Genetics, 29(1):132-148.

Esposito, Giulia; Raffrenato, Emiliano; Lukamba, Somwe D; Adnane, Mounir; Irons, Pete C; Cormican, Paul; Tasara, Taurai; Chapwanya, Aspinas (2020). Characterization of metabolic and inflammatory profiles of transition dairy cows fed an energy-restricted diet. Journal of Animal Science, 98(1):skz391.

Zelger-Paulus, Susann; Hadzic, Mélodie C A S; Sigel, Roland K O; Börner, Richard (2020). Encapsulation of Fluorescently Labeled RNAs into Surface-Tethered Vesicles for Single-Molecule FRET Studies in TIRF Microscopy. In: Arluison, Véronique; Wien, Frank. RNA Spectroscopy. New York: Springer, 1-16.

Fang, Bohao; Merilä, Juha; Matschiner, Michael; Momigliano, Paolo (2020). Estimating uncertainty in divergence times among three-spined stickleback clades using the multispecies coalescent. Molecular Phylogenetics and Evolution, 142:106646.

Sutter, Sereina O; Marconi, Peggy; Meier, Anita F (2020). Herpes simplex virus growth, preparation, and assay. In: Diefenbach, Russell J; Fraefel, Cornel. Herpes Simplex Virus. Totowa, NJ: Springer, 57-72.

Florez-Rueda, Ana Marcela; Waser, Lucas; Grossniklaus, Ueli (2020). Laser-assisted microdissection of plant embryos for transcriptional profiling. In: Bayer, Martin. Plant Embryogenesis : Methods and Protocols. Humana Press, New York: Springer, 127-139.

Bell, David; Lin, Qianshi; Gerelle, Wesley K; Joya, Steve; Chang, Ying; Taylor, Z Nathan; Rothfels, Carl J; Larsson, Anders; Villarreal, Juan Carlos; Li, Fay‐Wei; Pokorny, Lisa; Szövényi, Péter; Crandall‐Stotler, Barbara; DeGironimo, Lisa; Floyd, Sandra K; Beerling, David J; Deyholos, Michael K; von Konrat, Matt; Ellis, Shona; Shaw, A Jonathan; Chen, Tao; Wong, Gane K‐S; Stevenson, Dennis W; Palmer, Jeffrey D; Graham, Sean W (2020). Organellomic data sets confirm a cryptic consensus on (unrooted) land‐plant relationships and provide new insights into bryophyte molecular evolution. American Journal of Botany, 107(1):91-115.

Alcântara-Neto, A S; Fernandez-Rufete, M; Corbin, E; Tsikis, G; Uzbekov, R; Garanina, A S; Coy, P; Almiñana, C; Mermillod, Pascal (2020). Oviduct fluid extracellular vesicles regulate polyspermy during porcine invitro fertilisation. Reproduction, Fertility and Development, 32(4):409.

Burri, Jan T; Munglani, Gautam; Nelson, Bradley J; Grossniklaus, Ueli; Vogler, Hannes (2020). Quantification of mechanical forces and physiological processes involved in pollen tube growth using microfluidics and microrobotics. In: Geitmann, Anja. Pollen and Pollen Tube Biology : Methods and Protocols. Humana, New York: Springer, 275-292.

Zhao, Meng; Börner, Richard; Sigel, Roland K O; Freisinger, Eva (2020). Site-Specific Dual-Color Labeling of Long RNAs. In: Heise, Tilman. RNA Chaperones. New York: Springer, 253-270.

Hu, Xueyun; Jia, Ting; Hörtensteiner, Stefan; Tanaka, Ayumi; Tanaka, Ryouichi (2020). Subcellular localization of chlorophyllase2 reveals it is not involved in chlorophyll degradation during senescence in Arabidopsis thaliana. Plant Science, 290:110314.

Demurtas, Olivia Costantina; de Brito Francisco, Rita; Martinoia, Enrico; Giuliano, Giovanni (2020). Transportomics for the characterization of plant apocarotenoid transmembrane transporters. In: Rodríguez-Concepción, Manuel; Welsch, Ralf. Plant and Food Carotenoids. Clifton, USA: Springer, 89-99.

Suzuki, Daisuke; Flahou, Charlotte; Yoshikawa, Norihide; Stirblyte, Ieva; Hayashi, Yoshikazu; Sawaguchi, Akira; Akasaka, Marina; Nakamura, Sou; Higashi, Natsumi; Xu, Huaigeng; Matsumoto, Takuya; Fujio, Kosuke; Manz, Markus G; Hotta, Akitsu; Takizawa, Hitoshi; Eto, Koji; Sugimoto, Naoshi (2020). iPSC-Derived Platelets Depleted of HLA Class I Are Inert to Anti-HLA Class I and Natural Killer Cell Immunity. Stem Cell Reports, 14(1):49-59.

Bachmann-Gagescu, Ruxandra; Dempsey, Jennifer C; Bulgheroni, Sara; Chen, Maida L; D'Arrigo, Stefano; Glass, Ian A; Heller, Theo; Héon, Elise; Hildebrandt, Friedhelm; Joshi, Nirmal; Knutzen, Dana; Kroes, Hester Y; Mack, Stephen H; Nuovo, Sara; Parisi, Melissa A; Snow, Joseph; Summers, Angela C; Symons, Jordan M; Zein, Wadih M; Boltshauser, Eugen; Sayer, John A; Gunay-Aygun, Meral; Valente, Enza Maria; Doherty, Dan (2020). Healthcare recommendations for Joubert syndrome. American Journal of Medical Genetics. Part A, 182(1):229-249.

Doykov, Ivan D; Heywood, Wendy E; Nikolaenko, Valeria; Śpiewak, Justyna; Hällqvist, Jenny; Clayton, Peter Theodore; Mills, Philippa; Warnock, David G; Nowak, Albina; Mills, Kevin (2020). Rapid, proteomic urine assay for monitoring progressive organ disease in Fabry disease. Journal of Medical Genetics, 57(1):38-47.

Richards, Daelyn Y; Winn, Shelley R; Dudley, Sandra; Fedorov, Lev; Rimann, Nicole; Thöny, Beat; Harding, Cary O (2020). A novel Pah-exon1 deleted murine model of phenylalanine hydroxylase (PAH) deficiency. Molecular Genetics and Metabolism, 131(3):306-315.

Agca, Cavit; Grimm, Christian (2020). A simple guide for generating BAC transgenic animals for retinal research. Methods in Molecular Biology, 2092:109-122.

Bidla, Gawa; Watkins, David; Chéry, Céline; Froese, D. Sean; Ells, Courtney; Kerachian, Matin; Saskin, Avi; Christensen, Karen E; Gilfix, Brian M; Guéant, Jean-Louis; Rosenblatt, David S (2020). Biochemical analysis of patients with mutations in MTHFD1 and a diagnosis of methylenetetrahydrofolate dehydrogenase 1 deficiency. Molecular Genetics and Metabolism, 130(3):179-182.

Kuhn, Benedikt T; Zimmermann, Iwan; Egloff, Pascal; Hürlimann, Lea M; Hutter, Cedric A J; Miscenic, Christian; Dawson, Roger J P; Seeger, Markus A; Geertsma, Eric R (2020). Biotinylation of Membrane Proteins for Binder Selections. In: Perez, Camilo; Maier, Timm. Expression, Purification, and Structural Biology of Membrane Proteins. Switzerland: Springer, 151-165.

Shaul, Merav E; Eyal, Ophir; Guglietta, Silvia; Aloni, Pazzit; Zlotnik, Asaf; Forkosh, Ester; Levy, Liran; Weber, Lukas M; Levin, Yonathan; Pomerantz, Alon; Nechushtan, Hovav; Eruslanov, Evgeniy; Singhal, Sunil; Robinson, Mark D; Krieg, Carsten; Fridlender, Zvi G (2020). Circulating neutrophil subsets in advanced lung cancer patients exhibit unique immune signature and relate to prognosis. FASEB Journal, 34(3):4204-4218.

Marelli, Cecilia; Lavigne, Christian; Stepien, Karolina M; Janssen, Mirian C H; Feillet, Francois; Kožich, Viktor; Jesina, Pavel; Schule, Rebecca; Kessler, Christoph; Redonnet‐Vernhet, Isabelle; Regnier, Adeline; Burda, Patricie; Baumgartner, Matthias; Benoist, Jean‐Francois; Huemer, Martina; Mochel, Fanny (2020). Clinical and molecular characterization of adult patients with late‐onset MTHFR deficiency. Journal of Inherited Metabolic Disease:Epub ahead of print.

Ayoub, Sandy; Ghali, Neeti; Angwin, Chloe; Baker, Duncan; Baffini, Stella; Brady, Angela F; Giovannucci Uzielli, Maria Luisa; Giunta, Cecilia; Johnson, Diana S; Kosho, Tomoki; Neas, Katherine; Pope, F Michael; Rutsch, Frank; Scarselli, Gloria; Sobey, Glenda; Vandersteen, Anthony; van Dijk, Fleur S (2020). Clinical features, molecular results, and management of 12 individuals with the rare arthrochalasia Ehlers‐Danlos syndrome. American Journal of Medical Genetics. Part A, 182(5):994-1007.

Oehus, Ann-Kathrin; Kroeze, Stephanie G C; Schmidt-Hegemann, Nina-Sophie; Vogel, Marco M E; Kirste, Simon; Becker, Jessica; Burger, Irene A; Derlin, Thorsten; Bartenstein, Peter; Eiber, Matthias; Mix, Michael; la Fougère, Christian; Belka, Claus; Combs, Stephanie E; Grosu, Anca-Ligia; Müller, Arndt-Christian; Guckenberger, Matthias; Christiansen, Hans; Henkenberens, Christoph (2020). Efficacy of PSMA ligand PET-based radiotherapy for recurrent prostate cancer after radical prostatectomy and salvage radiotherapy. BMC Cancer, 20:362.

Lähnemann, David; Köster, Johannes; Szczurek, Ewa; McCarthy, Davis J; Hicks, Stephanie C; Robinson, Mark D; et al (2020). Eleven grand challenges in single-cell data science. Genome Biology, 21:31.

Tsapara, Georgia; Andermatt, Irwin; Stoeckli, Esther T (2020). Gene Silencing in Chicken Brain Development. In: Sprecher, Simon G. Brain Development. Humana, New York, NY: Springer, 439-456.

Märtner, E M Charlotte; Maier, Esther M; Mengler, Katharina; Thimm, Eva; Schiergens, Katharina A; Marquardt, Thorsten; Santer, René; Weinhold, Natalie; Marquardt, Iris; Das, Anibh M; Freisinger, Peter; Grünert, Sarah C; Vossbeck, Judith; Steinfeld, Robert; Baumgartner, Matthias R; Beblo, Skadi; Dieckmann, Andrea; Näke, Andrea; Lindner, Martin; Heringer‐Seifert, Jana; Lenz, Dominic; Hoffmann, Georg F; Mühlhausen, Chris; Ensenauer, Regina; Garbade, Sven F; Kölker, Stefan; Boy, Nikolas (2020). Impact of interventional and non‐interventional variables on anthropometric long‐term development in glutaric aciduria type 1: A national prospective multi‐centre study. Journal of Inherited Metabolic Disease:Epub ahead of print.

Seyffert, Michael; Fraefel, Cornel (2020). Multifluorescence live analysis of herpes simplex virus type-1 replication. In: Diefenbach, Russel J; Fraefel, Cornel. Herpes Simplex Virus. Totowa, NJ: Springer, 365-376.

Wiedemann, Arnaud; Chery, Céline; Coelho, David; Flayac, Justine; Gueguen, Naïg; Desquiret-Dumas, Valérie; Feillet, François; Lavigne, Christian; Neau, Jean-Philippe; Fowler, Brian; Baumgartner, Matthias R; Reynier, Pascal; Guéant, Jean-Louis; Oussalah, Abderrahim (2020). Mutations in MTHFR and POLG impaired activity of the mitochondrial respiratory chain in 46-year-old twins with spastic paraparesis. Journal of Human Genetics, 65(2):91-98.

Haudry, A; Laurent, S; Kapun, Martin (2020). Population Genomics on the Fly: Recent Advances in Drosophila. In: Dutheil, Julien Y. Statistical Population Genomics. Basel: Springer, 357-396.

Borrelli, Costanza; Moor, Andreas E (2020). Single-Molecule RNA FISH in Whole-Mount Organoids. In: Ordóñez-Morán, Paloma. Intestinal Stem Cells. Nottingham, UK: Springer, 237-247.

Hillert, Alicia; Anikster, Yair; Belanger-Quintana, Amaya; Burlina, Alberto; et al; Rohrbach, Marianne; Thöny, Beat; Blau, Nenad (2020). The Genetic Landscape and Epidemiology of Phenylketonuria. American Journal of Human Genetics, 107(2):234-250.

Najafi, Arash; Caspar, Sylvan M; Meienberg, Janine; Rohrbach, Marianne; Steinmann, Beat; Matyas, Gabor (2020). Variant filtering, digenic variants, and other challenges in clinical sequencing: a lesson from fibrillinopathies. Clinical Genetics, 97(2):235-245.

2019

Nur, Selim; Sparber, Florian; Lemberg, Christina; Guiducci, Eva; Schweizer, Tiziano A; Zwicky, Pascale; Becher, Burkhard; LeibundGut-Landmann, Salomé (2019). IL-23 supports host defense against systemic Candida albicans infection by ensuring myeloid cell survival. PLoS Pathogens, 15(12):e1008115.

Galindo‐Trigo, Sergio; Blanco‐Touriñán, Noel; DeFalco, Thomas A; Wells, Eloise S; Gray, Julie E; Zipfel, Cyril; Smith, Lisa M (2019). Cr RLK 1L receptor‐like kinases HERK 1 and ANJEA are female determinants of pollen tube reception. EMBO Reports:e48466.

Noreen, Faiza; Küng, Taya; Tornillo, Luigi; Parker, Hannah; Silva, Miguel; Weis, Stefan; Marra, Giancarlo; Rad, Roland; Truninger, Kaspar; Schär, Primo (2019). DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways. Clinical Epigenetics, 11:196.

Torrecilha, R B P; Milanesi, M; Gallana, M; Falbo, A K; Reichler, Iris M; Hug, P; Jagannathan, V; Trigo, B B; Paulan, S C; Bruno, D B; Garcia, S D; Scaramele, N F; Lopes, F L; Dolf, G; Leeb, T; Sölkner, J; Garcia, J F; Pienkowska‐Schelling, A; Schelling, Claude; Utsunomiya, Y T (2019). Association of missense variants in GDF9 with litter size in Entlebucher Mountain dogs. Animal Genetics, 51(1):78-86.

Walter, Jasmin; Huwiler, Fabian; Fortes, Claudia; Grossmann, Jonas; Roschitzki, Bernd; Hu, Junmin; Naegeli, Hanspeter; Laczko, Endre; Bleul, Ulrich (2019). Analysis of the equine “cumulome” reveals major metabolic aberrations after maturation in vitro. BMC Genomics, 20(1):588.

Hanson, Erin; Ingold, Sabrina; Dorum, Guro; Haas, Cordula; Lagace, Rob; Ballantyne, Jack (2019). Assigning forensic body fluids to DNA donors in mixed samples by targeted RNA/DNA deep seqeuncing of coding region SNPs using ion torrent technology. Forensic Science International: Genetics Supplement Series, 7(1):23-24.

Codilupi, Tamara; Taube, Doreen; Naegeli, Hanspeter (2019). CRL4 ubiquitin ligase stimulates Fanconi anemia pathway-induced single-stranded DNA-RPA signaling. BMC Cancer, 19(1):1042.

Begemann, Anaïs; Acuña, Mario A; Zweier, Markus; Vincent, Marie; Steindl, Katharina; Bachmann-Gagescu, Ruxandra; Hackenberg, Annette; Abela, Lucia; Plecko, Barbara; Kroell-Seger, Judith; Baumer, Alessandra; Yamakawa, Kazuhiro; Inoue, Yushi; Asadollahi, Reza; Sticht, Heinrich; Zeilhofer, Hanns Ulrich; Rauch, Anita (2019). Further corroboration of distinct functional features in SCN2A variants causing intellectual disability or epileptic phenotypes. Molecular Medicine, 25:6.

Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang; Chern, Mawsheng; Martin, Joel A; Copetti, Dario; Duong, Phat Q; Pham, Nikki T; Kudrna, David A; Talag, Jayson; Schackwitz, Wendy S; Lipzen, Anna M; Dilworth, David; Bauer, Diane; Grimwood, Jane; Nelson, Catherine R; Xing, Feng; Xie, Weibo; Barry, Kerrie W; Wing, Rod A; Schmutz, Jeremy; Li, Guotian; Ronald, Pamela C (2019). Genome sequence of the model rice variety KitaakeX. BMC Genomics, 20(1):905.

Füeg, F; Santos, S; Haslinger, C; Stoiber, B; Schäffer, L; Grünblatt, E; Zimmermann, R; Simões-Wüst, A P (2019). Influence of oxytocin receptor single nucleotide sequence variants on contractility of human myometrium: an in vitro functional study. BMC Medical Genetics, 20(1):178.

Grob, Stefan; Grossniklaus, Ueli (2019). Invasive DNA elements modify the nuclear architecture of their insertion site by KNOT-linked silencing in Arabidopsis thaliana. Genome Biology, 20(1):120.

Rutowicz, Kinga; Lirski, Maciej; Mermaz, Benoît; Teano, Gianluca; Schubert, Jasmin; Mestiri, Imen; Kroteń, Magdalena A; Fabrice, Tohnyui Ndinyanka; Fritz, Simon; Grob, Stefan; Ringli, Christoph; Cherkezyan, Lusik; Barneche, Fredy; Jerzmanowski, Andrzej; Baroux, Célia (2019). Linker histones are fine-scale chromatin architects modulating developmental decisions in Arabidopsis. Genome Biology, 20:157.

Bucher, K; Malama, E; Siuda, Mathias; Janett, Fredi; Bollwein, Heiner (2019). Multicolor flow cytometric analysis of cryopreserved bovine sperm: a tool for the evaluation of bull fertility. Journal of Dairy Science, 102(12):11652-11669.

Fischer, F; Helmer, S; Rogge, A; Arraras, J I; Buchholz, A; Hannawa, A; Horneber, M; Kiss, A; Rose, M; Söllner, W; Stein, B; Weis, J; Schofield, P; Witt, C M (2019). Outcomes and outcome measures used in evaluation of communication training in oncology – a systematic literature review, an expert workshop, and recommendations for future research. BMC Cancer, 19:808.

Monat, Cécile; Padmarasu, Sudharsan; Lux, Thomas; Wicker, Thomas; Gundlach, Heidrun; Himmelbach, Axel; Ens, Jennifer; Li, Chengdao; Muehlbauer, Gary J; Schulman, Alan H; Waugh, Robbie; Braumann, Ilka; Pozniak, Curtis; Scholz, Uwe; Mayer, Klaus F X; Spannagl, Manuel; Stein, Nils; Mascher, Martin (2019). TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools. Genome Biology, 20:284.

Barbieri, Chiara; Barquera, Rodrigo; Arias, Leonardo; Sandoval, José R; Acosta, Oscar; Zurita, Camilo; Aguilar-Campos, Abraham; Tito-Álvarez, Ana M; Serrano-Osuna, Ricardo; Gray, Russell D; Heggarty, Paul; Shimizu, Kentaro K; Fujita, Ricardo; Stoneking, Mark; Pugach, Irina; Fehren-Schmitz, Lars (2019). The current genomic landscape of western South America: Andes, Amazonia and Pacific Coast. Molecular Biology and Evolution, 36(12):2698-2713.

Klement, Rainer J; Abbasi-Senger, N; Adebahr, S; Alheid, H; Allgaeuer, M; Becker, G; Blanck, O; Boda-Heggemann, J; Brunner, T; Duma, M; Eble, M J; Ernst, I; Gerum, S; Habermehl, D; Hass, P; Henkenberens, C; Hildebrandt, G; Imhoff, D; Kahl, H; Klass, N D; Krempien, R; Lewitzki, V; Lohaus, F; Ostheimer, C; Papachristofilou, A; Petersen, C; Rieber, J; Schneider, T; Schrade, E; Semrau, R; Wachter, S; Wittig, A; Guckenberger, Matthias; Andratschke, N (2019). The impact of local control on overall survival after stereotactic body radiotherapy for liver and lung metastases from colorectal cancer: a combined analysis of 388 patients with 500 metastases. BMC Cancer, 19(1):173.

Armaleo, Daniele; Müller, Olaf; Lutzoni, François; et al; Szövényi, Péter (2019). The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata. BMC Genomics, 20:605.

Hanson, Erin; Dorum, Guro; Salzmann, Andrea; Fliss, Barbara; Hess, Sabine; Haas, Cordula; Ballantyne, Jack (2019). mRNA MPS tissue identification assay to aid in the investigation of traumatic injuries. Forensic Science International: Genetics Supplement Series, 7(1):25-26.

Dumeau, Charles-Etienne; Monfort, Asun; Kissling, Lucas; Swarts, Daan C; Jinek, Martin; Wutz, Anton (2019). Introducing gene deletions by mouse zygote electroporation of Cas12a/Cpf1. Transgenic research, 28(5-6):525-535.

Denoth-Lippuner, Annina; Jessberger, Sebastian (2019). Mechanisms of cellular rejuvenation. FEBS letters, 593(23):3381-3392.

Zeng, Shuqin; Ulbrich, Susanne E; Bauersachs, Stefan (2019). Spatial organization of endometrial gene expression at the onset of embryo attachment in pigs. BMC Genomics, 20(1):895.

Grosskurth, Elmar D; Bach, Dominik R; Economides, Marcos; Huys, Quentin J M; Holper, Lisa (2019). No substantial change in the balance between model-free and model-based control via training on the two-step task. PLoS Computational Biology, 15(11):e1007443.

Foria, Serena; Copetti, Dario; Eisenmann, Birgit; Magris, Gabriele; Vidotto, Michele; Scalabrin, Simone; Testolin, Raffaele; Cipriani, Guido; Wiedemann‐Merdinoglu, Sabine; Bogs, Jochen; Di Gaspero, Gabriele; Morgante, Michele (2019). Gene duplication and transposition of mobile elements drive evolution of the Rpv3 resistance locus in grapevine. The Plant Journal, 101(3):529-542.

Varadharajan, Srinidhi; Rastas, Pasi; Löytynoja, Ari; Matschiner, Michael; Calboli, Federico C F; Guo, Baocheng; Nederbragt, Alexander J; Jakobsen, Kjetill S; Merilä, Juha (2019). A high-quality assembly of the nine-spined stickleback (Pungitius pungitius) genome. Genome Biology and Evolution, 11(11):3291-3308.

Srinivasan, Raghuraman C; Zabulica, Mihaela; Hammarstedt, Christina; Wu, Tingting; Gramignoli, Roberto; Kannisto, Kristina; Ellis, Ewa; Karadagi, Ahmad; Fingerhut, Ralph; Allegri, Gabriella; Rüfenacht, Véronique; Thöny, Beat; Häberle, Johannes; Nuoffer, Jean‐Marc; Strom, Stephen C (2019). A liver‐humanized mouse model of carbamoyl phosphate synthetase 1‐deficiency. Journal of Inherited Metabolic Disease, 42(6):1054-1063.

Allegri, Gabriella; Deplazes, Sereina; Rimann, Nicole; Causton, Benjamin; Scherer, Tanja; Leff, Jonathan W; Diez‐Fernandez, Carmen; Klimovskaia, Anna; Fingerhut, Ralph; Krijt, Jakub; Kožich, Viktor; Nuoffer, Jean‐Marc; Grisch‐Chan, Hiu M; Thöny, Beat; Häberle, Johannes (2019). Comprehensive characterization of ureagenesis in the spf ash mouse, a model of human ornithine transcarbamylase deficiency, reveals age‐dependency of ammonia detoxification. Journal of Inherited Metabolic Disease, 42(6):1064-1076.

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Malmström, Lars (2019). Computational Proteomics with Jupyter and Python. In: Evans, C; Wright, P; Noirel, J. Mass Spectrometry of Proteins. Switzerland: Springer, 237-248.

Molema, Femke; Gleich, Florian; Burgard, Peter; et al; Baumgartner, M R (2019). Decreased plasma l-arginine levels in organic acidurias (MMA and PA) and decreased plasma branched-chain amino acid levels in urea cycle disorders as a potential cause of growth retardation: Options for treatment. Molecular Genetics and Metabolism, 126(4):397-405.

Häberle, Johannes; Thöny, Beat (2019). Editorial. Journal of Inherited Metabolic Disease, 42(6):1041-1043.

Molema, Femke; Gleich, Florian; Burgard, Peter; et al; Baumgartner, M R (2019). Evaluation of dietary treatment and amino acid supplementation in organic acidurias and urea‐cycle disorders: On the basis of information from a European multicenter registry. Journal of Inherited Metabolic Disease, 42(6):1162-1175.

Ballout, Rami A; Al Alam, Chadi; Bonnen, Penelope E; Huemer, Martina; El-Hattab, Ayman W; Shbarou, Rolla (2019). FBXL4-Related Mitochondrial DNA Depletion Syndrome 13 (MTDPS13): A Case Report With a Comprehensive Mutation Review. Frontiers in Genetics, 10:39.

Merten, Hannes; Schaefer, Jonas V; Brandl, Fabian; Zangemeister-Wittke, Uwe; Plückthun, Andreas (2019). Facile Site-Specific Multiconjugation Strategies in Recombinant Proteins Produced in Bacteria. In: Massa, Sam; Devoogdt, Nick. Bioconjugation : Methods and Protocols. New York: Springer, 253-273.

Felley-Bosco, Emanuela (2019). Hedgehog signaling in mesothelioma: 2019 status. Frontiers in Genetics, 10:1121.

Hof, Danielle; von Eckardstein, Arnold (2019). High-Sensitivity Troponin Assays in Clinical Diagnostics of Acute Coronary Syndrome. In: Heitzmann, CW. Calcium-Binding Proteins of the EF-Hand Superfamily. Humana Press, New York, NY: Springer, 645-662.

About, Frédégonde; Bibert, Stéphanie; Jouanguy, Emmanuelle; Nalpas, Bertrand; Lorenzo, Lazaro; Rattina, Vimel; Zarhrate, Mohammed; Hanein, Sylvain; Munteanu, Mona; Müllhaupt, Beat; Semela, David; Semmo, Nasser; Casanova, Jean-Laurent; Theodorou, Ioannis; Sultanik, Philippe; Poynard, Thierry; Pol, Stanislas; Bochud, Pierre-Yves; Cobat, Aurélie; Abel, Laurent; Swiss Hepatitis C Cohort Study Group; French ANRS HC EP 26 Genoscan Study Group (2019). Identification of an Endoglin Variant Associated With HCV-Related Liver Fibrosis Progression by Next-Generation Sequencing. Frontiers in Genetics, 10:1024.

Buerger, Corinna; Garbade, Sven F; Dietrich Alber, Fabienne; Waisbren, Susan E; McCarter, Robert; Kölker, Stefan; Burgard, Peter; Ah Mew, Nicholas; Batshaw, Mark L; Baumgartner, Matthias R; Berry, Susan A; Coughlin, Curtis; Cederbaum, Stephen; Diaz, George A; Feigenbaum, Annette; Gallagher, Renata C; Harding, Cary O; Hoffmann, Georg; Kerr, Douglas S; Lee, Brendan; Le Mons, Cynthia; Lichter‐Konecki, Uta; McCandless, Shawn E; Lawrence Merritt, J; Nagamani, Sandesh C S; Schulze, Andreas; Seashore, Margretta R; Stricker, Tamar; Summar, Marshall L; Tuchman, Mendel; et al (2019). Impairment of cognitive function in ornithine transcarbamylase deficiency is global rather than domain‐specific and is associated with disease onset, sex, maximum ammonium, and number of hyperammonemic events. Journal of Inherited Metabolic Disease, 42(2):243-253.

Grimm, Christian; Remé, Charlotte E (2019). Light Damage Models of Retinal Degeneration. Methods in Molecular Biology, 1834:167-178.

Tomska, Katarzyna; Scheinost, Sebastian; Zenz, Thorsten (2019). Lymphoma and Leukemia Cell Vulnerabilities and Resistance Identified by Compound Library Screens. Methods in Molecular Biology, 1956:351-362.

Loi, Monica; Ligeon, Laure-Anne; Münz, Christian (2019). MHC Class I Internalization via Autophagy Proteins. In: Ktistakis, Nicholas; Florey, Oliver. Autophagy. New York: Springer, 455-477.

Hochstrasser, R; Hilbi, H (2019). Migration of Acanthamoeba castellanii through Legionella Biofilms. In: Buchrieser, C; Hilbi, H. Legionella : Methods and Protocols (Second Edition). New York: Springer, 79-89.

Gannage, Monique; da Silva, Rosa Barreira; Münz, Christian (2019). Monitoring Antigen Processing for MHC Presentation via Macroautophagy. In: van Endert, Peter. Antigen Processing : Methods and Protocols. New York: Springer, 357-373.

Smith, Neil; Longo, Nicola; Levert, Keith; Hyland, Keith; Blau, Nenad (2019). Phase I clinical evaluation of CNSA-001 (sepiapterin), a novel pharmacological treatment for phenylketonuria and tetrahydrobiopterin deficiencies, in healthy volunteers. Molecular Genetics and Metabolism, 126:406-412.

Huemer, Martina; Diodato, Daria; Martinelli, Diego; Olivieri, Giorgia; Blom, Henk; Gleich, Florian; Kölker, Stefan; Kožich, Viktor; Morris, Andrew A; Seifert, Burkhardt; Froese, D Sean; Baumgartner, Matthias R; Dionisi‐Vici, Carlo; Martin, Carlos Alcalde; Baethmann, Martina; Ballhausen, Diana; Blasco‐Alonso, Javier; Boy, Nikolas; Bueno, Maria; Burgos Peláez, Rosa; Cerone, Roberto; Chabrol, Brigitte; Chapman, Kimberly A; Couce, Maria Luz; Crushell, Ellen; Dalmau Serra, Jaime; Diogo, Luisa; Ficicioglu, Can; García Jimenez, Maria Concepcion; García Silva, Maria Teresa; et al (2019). Phenotype, treatment practice and outcome in the cobalamin-dependent remethylation disorders and MTHFR deficiency: Data from the E-HOD registry. Journal of Inherited Metabolic Disease, 42(2):333-352.

Buchrieser, C; Hilbi, H (2019). Preface. In: Buchrieser, C; Hilbi, H. Legionella : Methods and Protocols (Second Edition). New York: Springer, v-xviii.

Bremmer, Felix; Bohnenberger, Hanibal; Küffer, Stefan; Oellerich, Thomas; Serve, Hubert; Urlaub, Henning; Strauss, Arne; Maatoug, Yasmine; Behnes, Carl Ludwig; Oing, Christoph; Radzun, Heinz Joachim; Ströbel, Philipp; Balabanov, Stefan; Honecker, Friedemann (2019). Proteomic Comparison of Malignant Human Germ Cell Tumor Cell Lines. Disease Markers, 2019:8298524.

Welin, A; Weber, S; Hilbi, H (2019). Quantitative imaging flow cytometry of Legionella-containing vacuoles in dually fluorescence-labelled Dictyostelium. In: Buchrieser, C; Hilbi, H. Legionella : Methods and Protocols (Second Edition). New York: Springer, 161-177.

Frauchiger, Anna Lisa; Dummer, Reinhard; Mangana, Joanna (2019). Serum S100B Levels in Melanoma. Methods in Molecular Biology, 1929:691-700.

Personnic, Nicolas; Striednig, Bianca; Hilbi, Hubert (2019). Single cell analysis of Legionella and Legionella-infected Acanthamoeba by agarose embedment. In: Buchrieser, C; Hilbi, H. Legionella : Methods and Protocols (Second Edition). New York: Springer, 191-204.

Zhang, Yi; Auger, Shelby; Schaefer, Jonas V; Plückthun, Andreas; Distefano, Mark D (2019). Site-Selective Enzymatic Labeling of Designed Ankyrin Repeat Proteins Using Protein Farnesyltransferase. In: Massa, Sam; Devoogdt, Nick. Bioconjugation : Methods and Protocols. New York: Springer, 207-219.

Jimenez-Rojo, Lucia; Mitsiadis, Thimios A (2019). Tissue Recombination and Kidney Capsule Transplantation Assays for the Study of Epithelial-Mesenchymal Interactions. In: Papagerakis, Petros. Odontogenesis. Methods and Protocols. New York: Springer, 49-55.

Wongkittichote, Parith; Cunningham, Gary; Summar, Marshall L; Pumbo, Elena; Forny, Patrick; Baumgartner, Matthias R; Chapman, Kimberly A (2019). Tricarboxylic acid cycle enzyme activities in a mouse model of methylmalonic aciduria. Molecular Genetics and Metabolism, 128(4):444-451.

Froese, D Sean; Fowler, Brian; Baumgartner, Matthias R (2019). Vitamin B12, folate, and the methionine remethylation cycle-biochemistry, pathways, and regulation. Journal of Inherited Metabolic Disease, 42(4):673-685.

2018

Nishimura, Tamiko; Fakim, Hana; Brandmann, Tobias; Youn, Ji-Young; Gingras, Anne-Claude; Jinek, Martin; Fabian, Marc R (2018). Human MARF1 is an endoribonuclease that interacts with the DCP1:2 decapping complex and degrades target mRNAs. Nucleic Acids Research, 46(22):12008-12021.

Altmeyer, Matthias (2018). Cells take a break when they are TIARed. EMBO Reports:e47403.

Stephen, Joshi; Maddirevula, Sateesh; Nampoothiri, Sheela; et al; Steindl, Katharina; Joset, Pascal; Ramantani, Georgia (2018). Bi-allelic TMEM94 Truncating Variants Are Associated with Neurodevelopmental Delay, Congenital Heart Defects, and Distinct Facial Dysmorphism. American Journal of Human Genetics, 103(6):948-967.

Schäfer, Beat W (2018). Duxbling Stem Cells Meet Tumorigenesis. Cell Stem Cell, 23(6):773-774.

Irwin, Darren E; Milá, Borja; Toews, David P L; Brelsford, Alan; Kenyon, Haley L; Porter, Alison N; Grossen, Christine; Delmore, Kira E; Alcaide, Miguel; Irwin, Jessica H (2018). A comparison of genomic islands of differentiation across three young avian species pairs. Molecular Ecology, 27(23):4839-4855.

Thind, Anupriya Kaur; Wicker, Thomas; Müller, Thomas; Ackermann, Patrick M; Steuernagel, Burkhard; Wulff, Brande B H; Spannagl, Manuel; Twardziok, Sven O; Felder, Marius; Lux, Thomas; Mayer, Klaus F X; Keller, Beat; Krattinger, Simon G (2018). Chromosome-scale comparative sequence analysis unravels molecular mechanisms of genome dynamics between two wheat cultivars. Genome Biology, 19:104.

Inglin, Raffael C; Meile, Leo; Stevens, Marc J A (2018). Clustering of pan- and core-genome of lactobacillus provides novel evolutionary insights for differentiation. BMC Genomics, 19(1):284.

Lindenblatt, Dennis; Terraneo, Nastassja; Pellegrini, Giovanni; Cohrs, Susan; Spycher, Philipp René; Vukovic, David; Béhé, Martin; Schibli, Roger; Grünberg, Jürgen (2018). Combination of lutetium-177 labelled anti-L1CAM antibody chCE7 with the clinically relevant protein kinase inhibitor MK1775: a novel combination against human ovarian carcinoma. BMC Cancer, 18(1):922.

Schmid, Marc W; Giraldo-Fonseca, Alejandro; Rövekamp, Moritz; Smetanin, Dmitry; Bowman, John L; Grossniklaus, Ueli (2018). Extensive epigenetic reprogramming during the life cycle of Marchantia polymorpha. Genome Biology, 19(1):9-..

Di Cesare, Andrea; Cabello-Yeves, Pedro J; Chrismas, Nathan A M; Sánchez-Baracaldo, Patricia; Salcher, Michaela M; Callieri, Cristiana (2018). Genome analysis of the freshwater planktonic Vulcanococcus limneticus sp. nov. reveals horizontal transfer of nitrogenase operon and alternative pathways of nitrogen utilization. BMC Genomics, 19(1):259.

Mattle-Greminger, Maja P; Bilgin Sonay, Tugce; Nater, Alexander; Pybus, Marc; Desai, Tariq; de Valles, Guillem; Casals, Ferran; Scally, Aylwyn; Bertranpetit, Jaume; Marques-Bonet, Tomas; van Schaik, Carel P; Anisimova, Maria; Krützen, Michael (2018). Genomes reveal marked differences in the adaptive evolution between orangutan species. Genome Biology, 19(1):193.

Gallana, M; Utsunomiya, Y T; Dolf, G; Pintor Torrecilha, R B; Falbo, A K; Jagannathan, V; Leeb, T; Reichler, Iris M; Sölkner, J; Schelling, Claude (2018). Genome‐wide association study and heritability estimate for ectopic ureters in Entlebucher mountain dogs. Animal Genetics, 49(6):645-650.

You, Wenpeng; Rühli, Frank J; Henneberg, Renata J; Henneberg, Maciej (2018). Greater family size is associated with less cancer risk: an ecological analysis of 178 countries. BMC Cancer, 18:924.

Wyck, Sarah; Herrera, Carolina; Requena, Cristina E; Bittner, Lilli; Hájková, Petra; Bollwein, Heiner; Santoro, Raffaella (2018). Oxidative stress in sperm affects the epigenetic reprogramming in early embryonic development. Epigenetics & Chromatin, 11(1):60.

Schiestl, Florian P; Balmer, Alice; Gervasi, Daniel D (2018). Real-time evolution supports a unique trajectory for generalized pollination. Evolution, 72(12):2653-2668.

Martínez-González, Nahara Anani; Neuner-Jehle, Stefan; Plate, Andreas; Rosemann, Thomas; Senn, Oliver (2018). The effects of shared decision-making compared to usual care for prostate cancer screening decisions: a systematic review and meta-analysis. BMC Cancer, 18:1015.

Fuchs, Katharina; Cardona Gloria, Yamel; Wolz, Olaf‐Oliver; Herster, Franziska; Sharma, Lokesh; Dillen, Carly A; Täumer, Christoph; Dickhöfer, Sabine; Bittner, Zsofia; Dang, Truong‐Minh; Singh, Anurag; Haischer, Daniel; Schlöffel, Maria A; Koymans, Kirsten J; Sanmuganantham, Tharmila; Krach, Milena; Roger, Thierry; Le Roy, Didier; Schilling, Nadine A; Frauhammer, Felix; Miller, Lloyd S; Nürnberger, Thorsten; LeibundGut-Landmann, Salomé; Gust, Andrea A; Macek, Boris; Frank, Martin; Gouttefangeas, Cécile; Dela Cruz, Charles S; Hartl, Dominik; Weber, Alexander N R; et al (2018). The fungal ligand chitin directly binds TLR2 and triggers inflammation dependent on oligomer size. EMBO Reports, 19(12):e46065.

Dyke, Stephanie O M; Linden, Mikael; Lappalainen, Ilkka; De Argila, Jordi Rambla; et al; Baudis, Michael (2018). Registered access: authorizing data access. European Journal of Human Genetics, 26(12):1721-1731.

Gomes, Margarida C; Tasrini, Yara; Subramoni, Sujatha; Agnoli, Kirsty; Feliciano, Joana R; Eberl, Leo; Sokol, Pamela; O'Callaghan, David; Vergunst, Annette C (2018). The afc antifungal activity cluster, which is under tight regulatory control of ShvR, is essential for transition from intracellular persistence of Burkholderia cenocepacia to acute pro-inflammatory infection. PLoS Pathogens, 14(12):e1007473.

Keller, Annika; Nuvolone, Mario; Abakumova, Irina; Chincisan, Andra; Reimann, Regina; Avar, Merve; Heinzer, Daniel; Hornemann, Simone; Wagner, Josephin; Kirschenbaum, Daniel; Voigt, Fabian F; Zhu, Caihong; Regli, Luca; Helmchen, Fritjof; Aguzzi, Adriano (2018). Prion pathogenesis is unaltered in a mouse strain with a permeable blood-brain barrier. PLoS Pathogens, 14(11):e1007424.

Hepojoki, Jussi; Hepojoki, Satu; Smura, Teemu; Szirovicza, Leonóra; Dervas, Eva; Prähauser, Barbara; Nufer, Lisbeth; Schraner, Elisabeth M; Vapalahti, Olli; Kipar, Anja; Hetzel, Udo (2018). Characterization of Haartman Institute snake virus-1 (HISV-1) and HISV-like viruses—The representatives of genus Hartmanivirus, family Arenaviridae. PLoS Pathogens, 14(11):e1007415.

Ismail, Hesham M; Krishnamoorthy, Navaneethakrishnan; Al-Dewik, Nader; Zayed, Hatem; Mohamed, Nura A; Giacomo, Valeria Di; Gupta, Sapna; Häberle, Johannes; Thöny, Beat; Blom, Henk J; Kruger, Waren D; Ben-Omran, Tawfeg; Nasrallah, Gheyath K (2018). In silico and in vivo models for Qatari-specific classical homocystinuria as basis for development of novel therapies. Human Mutation, 40(2):230-240.

Romano, Maria-Teresa; Tafazzoli, Aylar; Mattern, Maximilian; Sivalingam, Sugirthan; Wolf, Sabrina; Rupp, Alexander; Thiele, Holger; Altmüller, Janine; Nürnberg, Peter; Ellwanger, Jürgen; Gambon, Reto; Baumer, Alessandra; et al (2018). Bi-allelic Mutations in LSS, Encoding Lanosterol Synthase, Cause Autosomal-Recessive Hypotrichosis Simplex. American Journal of Human Genetics, 103(5):777-785.

Berger, Burkhard; Berger, Cordula; Heinrich, Josephin; Niederstätter, Harald; Hecht, Werner; Hellmann, Andreas; Rohleder, Udo; Schleenbecker, Uwe; Morf, Nadja V; Freire-Aradas, Ana; McNevin, Dennis; Phillips, Christopher; Parson, Walther (2018). Dog breed affiliation with a forensically validated canine STR set. Forensic Science International. Genetics, 37:126-134.

Akbergenov, Rashid; Duscha, Stefan; Fritz, Ann-Kristina; Juskeviciene, Reda; Oishi, Naoki; Schmitt, Karen; Shcherbakov, Dimitri; Teo, Youjin; Boukari, Heithem; Freihofer, Pietro; Isnard-Petit, Patricia; Oettinghaus, Björn; Frank, Stephan; Thiam, Kader; Rehrauer, Hubert; Westhof, Eric; Schacht, Jochen; Eckert, Anne; Wolfer, David; Böttger, Erik C (2018). Mutant MRPS5 affects mitoribosomal accuracy and confers stress-related behavioral alterations. EMBO Reports, 19(11):e46193.

Cantù, Claudio; Felker, Anastasia; Zimmerli, Dario; Prummel, Karin D; Cabello, Elena M; Chiavacci, Elena; Méndez-Acevedo, Kevin M; Kirchgeorg, Lucia; Burger, Sibylle; Ripoll, Jorge; Valenta, Tomas; Hausmann, George; Vilain, Nathalie; Aguet, Michel; Burger, Alexa; Panáková, Daniela; Basler, Konrad; Mosimann, Christian (2018). Mutations in and genes cause congenital heart defects by tissue-specific perturbation of Wnt/β-catenin signaling. Genes and Development, 32(21-22):1443-1458.

Pośpiech, Ewelina; Chen, Yan; Kukla-Bartoszek, Magdalena; et al; Gysi, Mario; EUROFORGEN-NoE Consortium (2018). Towards broadening Forensic DNA Phenotyping beyond pigmentation: Improving the prediction of head hair shape from DNA. Forensic Science International. Genetics, 37:241-251.

Zastrow, Diane B; Baudet, Heather; Shen, Wei; Thomas, Amanda; Si, Yue; Weaver, Meredith A; Lager, Angela M; Liu, Jixia; Mangels, Rachel; Dwight, Selina S; Wright, Matt W; Dobrowolski, Steven F; Eilbeck, Karen; Enns, Gregory M; Feigenbaum, Annette; Lichter-Konecki, Uta; Lyon, Elaine; Pasquali, Marzia; Watson, Michael; Blau, Nenad; Steiner, Robert D; Craigen, William J; Mao, Rong (2018). Unique aspects of sequence variant interpretation for inborn errors of metabolism (IEM): The ClinGen IEM Working Group and the Phenylalanine Hydroxylase Gene. Human Mutation, 39(11):1569-1580.

Bärnreuther, Sandra (2018). Suitable substances: how biobanks (re)store biologicals. New Genetics and Society, 37(4):319-337.

Schirmer, Uwe; Fiegl, Heidi; Pfeifer, Marco; Zeimet, Alain G; Müller-Holzner, Elisabeth; Bode, Peter K; Tischler, Verena; Altevogt, Peter (2018). Correction to: Epigenetic regulation of L1CAM in endometrial carcinoma: comparison to cancer-testis (CT-X) antigens. BMC Cancer, 18(1):1047.

Ramsauer, Anna Sophie; Bachofen, Claudia; Kubacki, Jakub; Favrot, Claude; Nicolier, Alexandra; Fraefel, Cornel; Tobler, Kurt (2018). Complete genome sequence of a Boa (Boa constrictor)-specific papillomavirus type 1 isolate. Microbiology Resource Announcements, 7(16):e01159.

Aguilar-Rodríguez, José; Wagner, Andreas (2018). Metabolic determinants of enzyme evolution in a genome-scale bacterial metabolic network. Genome Biology and Evolution, 10(11):3076-3088.

Zellweger, Ralph; Lopes, Massimo (2018). Dynamic Architecture of Eukaryotic DNA Replication Forks In Vivo, Visualized by Electron Microscopy. In: Muzi-Falconi, Marco; Brown, Grant W. Genome Instability : Methods and Protocols. New York: Springer, 261-294.

Daga, Neha; Eicher, Simone; Kannan, Abhilash; Casanova, Alain; Low, Shyan H; Kreibich, Saskia; Andritschke, Daniel; Emmenlauer, Mario; Jenkins, Jeremy L; Hardt, Wolf-Dietrich; Greber, Urs F; Dehio, Christoph; von Mering, Christian (2018). Growth-restricting effects of siRNA transfections: a largely deterministic combination of off-target binding and hybridization-independent competition. Nucleic Acids Research, 46(18):9309-9320.

Scarborough, Joseph; Mueller, Flavia; Weber-Stadlbauer, Ulrike; Richetto, Juliet; Meyer, Urs (2018). Dependency of prepulse inhibition deficits on baseline startle reactivity in a mouse model of the human 22q11.2 microdeletion syndrome. Genes, Brain and Behavior:e12523.

Bardelli, Marco; Frontzek, Karl; Simonelli, Luca; Hornemann, Simone; Pedotti, Mattia; Mazzola, Federica; Carta, Manfredi; Eckhardt, Valeria; D’Antuono, Rocco; Virgilio, Tommaso; González, Santiago F; Aguzzi, Adriano; Varani, Luca (2018). A bispecific immunotweezer prevents soluble PrP oligomers and abolishes prion toxicity. PLoS Pathogens, 14(10):e1007335.

Singh, Simrat Pal; Hurni, Severine; Ruinelli, Michela; Brunner, Susanne; Sanchez-Martin, Javier; Krukowski, Patricia; Peditto, David; Buchmann, Gabriele; Zbinden, Helen; Keller, Beat (2018). Evolutionary divergence of the rye Pm17 and Pm8 resistance genes reveals ancient diversity. Plant molecular biology, 98(3):249-260.

Bourgeois, Yann; Stritt, Christoph; Walser, Jean-Claude; Gordon, Sean P; Vogel, John P; Roulin, Anne C (2018). Genome-wide scans of selection highlight the impact of biotic and abiotic constraints in natural populations of the model grass Brachypodium distachyon. The Plant Journal, 96(2):438-451.

Ponzi, Erica; Keller, Lukas F; Bonnet, Timothée; Muff, Stefanie (2018). Heritability, selection, and the response to selection in the presence of phenotypic measurement error: Effects, cures, and the role of repeated measurements. Evolution, 72(10):1992-2004.

Wolak, Matthew E; Arcese, Peter; Keller, Lukas F; Nietlisbach, Pirmin; Reid, Jane M (2018). Sex-specific additive genetic variances and correlations for fitness in a song sparrow (Melospiza melodia) population subject to natural immigration and inbreeding. Evolution, 72(10):2057-2075.

Huang, Ji; Montani, Jean-Pierre; Verrey, François; Feraille, Eric; Ming, Xiu-Fen; Yang, Zhihong (2018). Arginase-II negatively regulates renal aquaporin-2 and water reabsorption. FASEB Journal, 32(10):5520-5531.

Das, Aditi; Christ, Bastien; Hörtensteiner, Stefan (2018). Characterization of the pheophorbide a oxygenase/phyllobilin pathway of chlorophyll breakdown in grasses. Planta, 248(4):875-892.

Münger, Linda H; Garcia-Aloy, Mar; Vázquez-Fresno, Rosa; Gille, Doreen; Rosana, Albert Remus R; Passerini, Anna; Soria-Florido, María-Trinidad; Pimentel, Grégory; Sajed, Tanvir; Wishart, David S; Andres Lacueva, Cristina; Vergères, Guy; Praticò, Giulia (2018). Biomarker of food intake for assessing the consumption of dairy and egg products. Genes & Nutrition, 13:26.

Schmid, Michael; Frei, Daniel; Patrignani, Andrea; Schlapbach, Ralph; Frey, Jürg E; Remus-Emsermann, Mitja N P; Ahrens, Christian H (2018). Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats. Nucleic Acids Research, 46(17):8953-8965.

Cernikova, Lenka; Faso, Carmen; Hehl, Adrian B (2018). Five facts about Giardia lamblia. PLoS Pathogens, 14(9):e1007250.

Hartmann, Jessica; Münch, Robert C; Freiling, Ruth-Therese; Schneider, Irene C; Dreier, Birgit; Samukange, Washington; Koch, Joachim; Seeger, Markus A; Plückthun, Andreas; Buchholz, Christian J (2018). A Library-Based Screening Strategy for the Identification of DARPins as Ligands for Receptor-Targeted AAV and Lentiviral Vectors. Molecular Therapy - Methods & Clinical Development, 10:128-143.

Hornemann, Thorsten; Alecu, Irina; Hagenbuch, Niels; Zhakupova, Assem; Cremonesi, Alessio; Gautschi, Matthias; Jung, Hans H; Meienberg, Fabian; Bilz, Stefan; Christ, Emanuel; Baumgartner, Matthias R; Hochuli, Michel (2018). Disturbed sphingolipid metabolism with elevated 1-deoxysphingolipids in glycogen storage disease type I – A link to metabolic control. Molecular Genetics and Metabolism, 125(1/2):73-78.

Terranova, M; Kreuzer, Michael; Braun, Ueli; Schwarm, Angela (2018). In vitro screening of temperate climate forages from a variety of woody plants for their potential to mitigate ruminal methane and ammonia formation. Journal of Agricultural Science, 156(7):929-941.

Zubakov, Dmitry; Chamier-Ciemińska, Joanna; Kokmeijer, Iris; Maciejewska, Agnieszka; Martínez, Pilar; Pawłowski, Ryszard; Haas, Cordula; Kayser, Manfred (2018). Introducing novel type of human DNA markers for forensic tissue identification: DNA copy number variation allows the detection of blood and semen. Forensic Science International. Genetics, 36:112-118.

Kovar, Lynsey; Nageswara-Rao, Madhugiri; Ortega-Rodriguez, Sealtiel; Dugas, Diana V; Straub, Shannon; Cronn, Richard; Strickler, Susan R; Hughes, Colin E; Hanley, Kathryn A; Rodriguez, Deyra N; Langhorst, Bradley W; Dimalanta, Eileen T; Bailey, C Donovan (2018). PacBio-based mitochondrial genome assembly of Leucaena trichandra (Leguminosae) and an intrageneric assessment of mitochondrial RNA editing. Genome Biology and Evolution, 10(9):2501-2517.

Himmelreich, Nastassja; Shen, Nan; Okun, Jürgen G; Thiel, Christian; Hoffmann, Georg F; Blau, Nenad (2018). Relationship between genotype, phenylalanine hydroxylase expression and in vitro activity and metabolic phenotype in phenylketonuria. Molecular Genetics and Metabolism, 125(1-2):86-95.

Roth, Morgane; Florez-Rueda, Ana M; Paris, Margot; Städler, Thomas (2018). Wild tomato endosperm transcriptomes reveal common roles of genomic imprinting in both nuclear and cellular endosperm. The Plant Journal, 95(6):1084-1101.

Sprave, Tanja; Verma, Vivek; Förster, Robert; Schlampp, Ingmar; Hees, Katharina; Bruckner, Thomas; Bostel, Tilman; El Shafie, Rami Ateyah; Welzel, Thomas; Nicolay, Nils Henrik; Debus, Jürgen; Rief, Harald (2018). Local response and pathologic fractures following stereotactic body radiotherapy versus three-dimensional conformal radiotherapy for spinal metastases - a randomized controlled trial. BMC Cancer, 18(1):859.

Almiñana, C; Tsikis, G; Labas, V; Uzbekov, R; da Silveira, J C; Bauersachs, Stefan; Mermillod, P (2018). Deciphering the oviductal extracellular vesicles content across the estrous cycle: implications for the gametes-oviduct interactions and the environment of the potential embryo. BMC Genomics, 19:622.

Lintas, V; Fioretta, E S; Motta, S E; Dijkman, P E; Pensalfini, M; Mazza, E; Caliskan, E; Rodriguez, H; Lipiski, M; Sauer, M; Cesarovic, N; Hoerstrup, S P; Emmert, M Y (2018). Development of a Novel Human Cell-Derived Tissue-Engineered Heart Valve for Transcatheter Aortic Valve Replacement: an In Vitro and In Vivo Feasibility Study. Journal of Cardiovascular Translational Research, 11(6):470-482.

Katthagen, Teresa; Mathys, Christoph; Deserno, Lorenz; Walter, Henrik; Kathmann, Norbert; Heinz, Andreas; Schlagenhauf, Florian (2018). Modeling subjective relevance in schizophrenia and its relation to aberrant salience. PLoS Computational Biology, 14(8):e1006319.

Espada, Margarida; Eves-van den Akker, Sebastian; Maier, Tom; Vijayapalani, Paramasivan; Baum, Thomas; Mota, Manuel; Jones, John T (2018). STATAWAARS: a promoter motif associated with spatial expression in the major effector-producing tissues of the plantparasitic nematode Bursaphelenchus xylophilus. BMC Genomics, 19(1):553.

Bick, Jochen T; Flöter, Veronika L; Robinson, Mark D; Bauersachs, Stefan; Ulbrich, Susanne E (2018). Small RNA-seq analysis of single porcine blastocysts revealed that maternal estradiol-17beta exposure does not affect miRNA isoform (isomiR) expression. BMC Genomics, 19(1):590.

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Blache, Ulrich; Vallmajo‐Martin, Queralt; Horton, Edward R; Guerrero, Julien; Djonov, Valentin; Scherberich, Arnaud; Erler, Janine T; Martin, Ivan; Snedeker, Jess G; Milleret, Vincent; Ehrbar, Martin (2018). Notch‐inducing hydrogels reveal a perivascular switch of mesenchymal stem cell fate. EMBO Reports, 19(8):e45964.

Tzovara, Athina; Korn, Christoph W; Bach, Dominik R (2018). Human Pavlovian fear conditioning conforms to probabilistic learning. PLoS Computational Biology, 14(8):e1006243.

Diez-Fernandez, Carmen; Rüfenacht, Véronique; Gemperle, Corinne; Fingerhut, Ralph; Häberle, Johannes (2018). Mutations and common variants in the human arginase 1 (ARG1) gene: Impact on patients, diagnostics, and protein structure considerations. Human Mutation, 39(8):1029-1050.

Remacle, Noémie; Forny, Patrick; Cudré-Cung, Hong-Phuc; Gonzalez-Melo, Mary; do Vale-Pereira, Sónia; Henry, Hugues; Teav, Tony; Gallart-Ayala, Hector; Braissant, Olivier; Baumgartner, Matthias; Ballhausen, Diana (2018). New in vitro model derived from brain-specific Mut-/- mice confirms cerebral ammonium accumulation in methylmalonic aciduria. Molecular Genetics and Metabolism, 124(4):266-277.

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San Roman, Magdalena; Wagner, Andreas (2018). An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment. PLoS Computational Biology, 14(7):e1006340.

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Leslie Pedrioli, Deena M; Leutert, Mario; Bilan, Vera; Nowak, Kathrin; Gunasekera, Kapila; Ferrari, Elena; Imhof, Ralph; Malmström, Lars; Hottiger, Michael O (2018). Comprehensive ADP‐ribosylome analysis identifies tyrosine as an ADP‐ribose acceptor site. EMBO Reports, 19(8):e45310.

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Singh, Rashim Pal; Grinenko, Tatyana; Ramasz, Beáta; Franke, Kristin; Lesche, Mathias; Dahl, Andreas; Gassmann, Max; Chavakis, Triantafyllos; Henry, Ian; Wielockx, Ben (2018). Hematopoietic stem cells but not multipotent progenitors drive erythropoiesis during chronic erythroid stress in EPO transgenic mice. Stem Cell Reports, 10(6):1908-1919.

Qi, Weihong; Cascarano, Maria Chiara; Schlapbach, Ralph; Katharios, Pantelis; Vaughan, Lloyd; Seth-Smith, Helena M B (2018). Ca. Endozoicomonas cretensis: A Novel Fish Pathogen Characterized by Genome Plasticity. Genome Biology and Evolution, 10(6):1363-1374.

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Ros, Oriol; Barrecheguren, Pablo José; Cotrufo, Tiziana; Schaettin, Martina; Roselló-Busquets, Cristina; Vílchez-Acosta, Alba; Hernaiz-Llorens, Marc; Martínez-Marmol, Ramón; Ulloa, Fausto; Stoeckli, Esther T; Araújo, Sofia J; Soriano, Eduardo (2018). A conserved role for Syntaxin-1 in pre- and post-commissural midline axonal guidance in fly, chick, and mouse. PLoS Genetics, 14(6):e1007432.

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Motta, Sarah E; Fioretta, Emanuela S; Dijkman, Petra E; Lintas, Valentina; Behr, Luc; Hoerstrup, Simon P; Emmert, Maximilian Y (2018). Development of an Off-the-Shelf Tissue-Engineered Sinus Valve for Transcatheter Pulmonary Valve Replacement: a Proof-of-Concept Study. Journal of Cardiovascular Translational Research, 11(3):182-191.

Ansar, Muhammad; Chung, Hyunglok; Waryah, Yar M; Makrythanasis, Periklis; Falconnet, Emilie; Rao, Ali Raza; Guipponi, Michel; Narsani, Ashok K; Fingerhut, Ralph; Santoni, Federico A; Ranza, Emmanuelle; Waryah, Ali M; Bellen, Hugo J; Antonarakis, Stylianos E (2018). Visual impairment and progressive phthisis bulbi caused by recessive pathogenic variant in MARK3. Human Molecular Genetics, 27(15):2703-2711.

Schneider, Paul M; Eshmuminov, Dilmurodjon; Rordorf, Tamara; Vetter, Diana; Veit-Haibach, Patrick; Weber, Achim; Bauerfeind, Peter; Samaras, Panagiotis; Lehmann, Kuno (2018). 18FDG-PET-CT identifies histopathological non-responders after neoadjuvant chemotherapy in locally advanced gastric and cardia cancer: cohort study. BMC Cancer, 18:548.

Menin, Luca; Ursich, Sebastian; Trovesi, Camilla; Zellweger, Ralph; Lopes, Massimo; Longhese, Maria Pia; Clerici, Michela (2018). Tel1/ATM prevents degradation of replication forks that reverse after topoisomerase poisoning. EMBO Reports:e45535.

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Dørum, Guro; Ingold, Sabrina; Hanson, Erin; Ballantyne, Jack; Snipen, Lars; Haas, Cordula (2018). Predicting the origin of stains from next generation sequencing mRNA data. Forensic Science International. Genetics, 34:37-48.

Lee, Jessica J Y; Gottlieb, Michael M; Lever, Jake; Jones, Steven J M; Blau, Nenad; van Karnebeek, Clara D M; Wasserman, Wyeth W (2018). Text-based phenotypic profiles incorporating biochemical phenotypes of inborn errors of metabolism improve phenomics-based diagnosis. Journal of Inherited Metabolic Disease, 41(3):555-562.

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Schuenemann, Verena J; Avanzi, Charlotte; Krause-Kyora, Ben; Seitz, Alexander; Herbig, Alexander; Inskip, Sarah; Bonazzi, Marion; Reiter, Ella; Urban, Christian; Dangvard Pedersen, Dorthe; Taylor, G Michael; Singh, Pushpendra; Stewart, Graham R; Velemínský, Petr; Likovsky, Jakub; Marcsik, Antónia; Molnár, Erika; Pálfi, György; Mariotti, Valentina; Riga, Alessandro; Belcastro, M Giovanna; Boldsen, Jesper L; Nebel, Almut; Mays, Simon; Donoghue, Helen D; Zakrzewski, Sonia; Benjak, Andrej; Nieselt, Kay; Cole, Stewart T; Krause, Johannes (2018). Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe. PLoS Pathogens, 14(5):e1006997.

Chaurasia, Soumya; Lehner, Christian F (2018). Dynamics and control of sister kinetochore behavior during the meiotic divisions in Drosophila spermatocytes. PLoS Genetics, 14(5):e1007372.

Fritsch, Kristin; Pigeot, Sébastien; Feng, Xiaomin; Bourgine, Paul E; Schroeder, Timm; Martin, Ivan; Manz, Markus G; Takizawa, Hitoshi (2018). Engineered humanized bone organs maintain human hematopoiesis in vivo. Experimental Hematology, 61:45-51.e5.

Rehrauer, Hubert; Wu, Licun; Blum, Walter; Pecze, Lazslo; Henzi, Thomas; Serre-Beinier, Véronique; Aquino, Catherine; Vrugt, Bart; de Perrot, Marc; Schwaller, Beat; Felley-Bosco, Emanuela (2018). How asbestos drives the tissue towards tumors: YAP activation, macrophage and mesothelial precursor recruitment, RNA editing, and somatic mutations. Oncogene, 37(20):2645-2659.

Crowther, L M; Poms, M; Plecko, Barbara (2018). Multiomics tools for the diagnosis and treatment of rare neurological disease. Journal of Inherited Metabolic Disease, 41(3):425-434.

Scheckel, Claudia; Aguzzi, Adriano (2018). Prions, prionoids and protein misfolding disorders. Nature Reviews. Genetics, 19(7):405-418.

Sprouffske, Kathleen; Aguilar-Rodríguez, José; Sniegowski, Paul; Wagner, Andreas (2018). High mutation rates limit evolutionary adaptation in Escherichia coli. PLoS Genetics, 14(4):e1007324.

Wu, Licun; Blum, Walter; Zhu, Chang-Qi; Yun, Zhihong; Pecze, Laszlo; Kohno, Mikihiro; Chan, Mei-Lin; Zhao, Yidan; Felley-Bosco, Emanuela; Schwaller, Beat; de Perrot, Marc (2018). Putative cancer stem cells may be the key target to inhibit cancer cell repopulation between the intervals of chemoradiation in murine mesothelioma. BMC Cancer, 18(1):471.

Askari, Zeynab; Mas-Coma, Santiago; Bouwman, Abigail S; Boenke, Nicole; Stöllner, Thomas; Aali, Abolfazl; Rezaiian, Mostafa; Mowlavi, Gholamreza (2018). Fasciola hepatica eggs in paleofaeces of the Persian onager Equus hemionus onager, a donkey from Chehrabad archaeological site, dating back to the Sassanid Empire (224-651 AD), in ancient Iran. Infection, Genetics and Evolution, 62:233-243.

Debbache, Julien; Parfejevs, Vadims; Sommer, Lukas (2018). Cre-driver lines used for genetic fate mapping of neural crest cells in the mouse: An overview. Genesis, 56(6-7):e23105.

Zimmerli, Dario; Cecconi, Virginia; Valenta, Tomas; Hausmann, George; Cantù, Claudio; Restivo, Gaetana; Hafner, Jürg; Basler, Konrad; van den Broek, Maries (2018). WNT ligands control initiation and progression of human papillomavirus-driven squamous cell carcinoma. Oncogene, 37(27):3753-3762.

Finazzi, T; Rordorf, T; Ikenberg, K; Huber, G F; Guckenberger, M; Garcia Schueler, H I (2018). Radiotherapy-induced anti-tumor immune response and immune-related adverse events in a case of recurrent nasopharyngeal carcinoma undergoing anti-PD-1 immunotherapy. BMC Cancer, 18(1):395.

Willi, Yvonne; Fracassetti, Marco; Zoller, Stefan; Van Buskirk, Josh (2018). Accumulation of Mutational Load at the Edges of a Species Range. Molecular Biology and Evolution, 35(4):781-791.

Koller, Teresa; Brunner, Susanne; Herren, Gerhard; Hurni, Severine; Keller, Beat (2018). Pyramiding of transgenic Pm3 alleles in wheat results in improved powdery mildew resistance in the field. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 131(4):861-871.

Johler, Sophia; Macori, Guerrino; Bellio, A; Acutis, P L; Gallina, S; Decastelli, L (2018). Short communication: Characterization of Staphylococcus aureus isolated along the raw milk cheese production process in artisan dairies in Italy. Journal of Dairy Science, 101(4):2915-2920.

Malmstrøm, Martin; Britz, Ralf; Matschiner, Michael; Tørresen, Ole K; Hadiaty, Renny Kurnia; Yaakob, Norsham; Tan, Heok Hui; Jakobsen, Kjetill Sigurd; Salzburger, Walter; Rüber, Lukas (2018). The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes. Genome Biology and Evolution, 10(4):1088-1103.

Murer, Anita; McHugh, Donal; Caduff, Nicole; Kalchschmidt, Jens; Barros, Mario; Zbinden, Andrea; Capaul, Riccarda; Niedobitek, Gerald; Allday, Martin; Chijioke, Obinna; Münz, Christian (2018). EBV persistence without its EBNA3A and 3C oncogenes in vivo. PLoS Pathogens, 14(4):e1007039.

Wallis, Mathew; Baumer, Alessandra; Smaili, Wiam; Jaouad, Imane Cherkaoui; Sefiani, Abdelaziz; Jacobson, Erica; Bowyer, Lucy; Mowat, David; Rauch, Anita (2018). Surprisingly good outcome in antenatal diagnosis of severe hydrocephalus related to CCDC88C deficiency. European Journal of Medical Genetics, 61(4):189-196.

Ehlert, Karoline; Levade, Thierry; Di Rocco, Maja; Lanino, Edoardo; Albert, Michael H; Führer, Monika; Jarisch, Andrea; Güngör, Tayfun; Ayuk, Francis; Vormoor, Josef (2018). Allogeneic hematopoietic cell transplantation in Farber disease. Journal of Inherited Metabolic Disease:Epub ahead of print.

Kliver, Sergei; Rayko, Mike; Komissarov, Alexey; Bakin, Evgeny; Zhernakova, Daria; Prasad, Kasavajhala; Rushworth, Catherine; Baskar, R; Smetanin, Dmitry; Schmutz, Jeremy; Rokhsar, Daniel S; Mitchell-Olds, Thomas; Grossniklaus, Ueli; Brukhin, Vladimir (2018). Assembly of the Boechera retrofracta Genome and Evolutionary Analysis of Apomixis-Associated Genes. Genes, 9(4):185.

Andratschke, N; Alheid, H; Allgäuer, M; Becker, G; Blanck, O; Boda-Heggemann, J; Brunner, T; Duma, M; Gerum, S; Guckenberger, M; Hildebrandt, G; Klement, R J; Lewitzki, V; Ostheimer, C; Papachristofilou, A; Petersen, C; Schneider, T; Semrau, R; Wachter, S; Habermehl, D (2018). The SBRT database initiative of the German Society for Radiation Oncology (DEGRO): patterns of care and outcome analysis of stereotactic body radiotherapy (SBRT) for liver oligometastases in 474 patients with 623 metastases. BMC Cancer, 18(1):283.

Flöter, Veronika L; Lorenz, Anne-Kathrin; Kirchner, Benedikt; Pfaffl, Michael W; Bauersachs, Stefan; Ulbrich, Susanne E (2018). Impact of preimplantational oral low-dose estradiol-17β exposure on the endometrium: The role of miRNA. Molecular Reproduction and Development, 85(5):417-426.

Stichling, Nicole; Suomalainen, Maarit; Flatt, Justin W; Schmid, Markus; Pacesa, Martin; Hemmi, Silvio; Jungraithmayr, Wolfgang; Maler, Mareike D; Freudenberg, Marina A; Plückthun, Andreas; May, Tobias; Köster, Mario; Fejer, György; Greber, Urs F (2018). Lung macrophage scavenger receptor SR-A6 (MARCO) is an adenovirus type-specific virus entry receptor. PLoS Pathogens, 14(3):e1006914.

Hediger, Nina; Landolt, Markus A; Diez-Fernandez, Carmen; Huemer, Martina; Häberle, Johannes (2018). The impact of ammonia levels and dialysis on outcome in 202 patients with neonatal onset urea cycle disorders. Journal of Inherited Metabolic Disease, 41(4):689-698.

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Caspar, S M; Dubacher, N; Kopps, A M; Meienberg, J; Henggeler, C; Matyas, G (2018). Clinical sequencing: From raw data to diagnosis with lifetime value. Clinical Genetics, 93(3):508-519.

Dimitrov, B; Himmelreich, N; Hipgrave Ederveen, A L; Lüchtenborg, C; et al; Hackenberg, A (2018). Cutis laxa, exocrine pancreatic insufficiency and altered cellular metabolomics as additional symptoms in a new patient with ATP6AP1-CDG. Molecular Genetics and Metabolism, 123(3):364-374.

Ramirez, Kelly S; Knight, Christopher G; de Hollander, Mattias; Brearley, Francis Q; Constantinides, Bede; Cotton, Anne; et al; Crowther, Thomas W; Hartman, Kyle; van der Heijden, Marcel G A (2018). Detecting macroecological patterns in bacterial communities across independent studies of global soils. Nature Microbiology, 3(2):189-196.

Csilléry, Katalin; Rodríguez-Verdugo, Alejandra; Rellstab, Christian; Guillaume, Frédéric (2018). Detecting the genomic signal of polygenic adaptation and the role of epistasis in evolution. Molecular Ecology, 27(3):606-612.

Jeannerat, E; Marti, E; Berney, C; Janett, Fredi; Bollwein, Heiner; Sieme, H; Burger, D; Wedekind, C (2018). Stallion semen quality depends on major histocompatibility complex matching to teaser mare. Molecular Ecology, 27(4):1025-1035.

Tamás, Markus J; Fauvet, Bruno; Christen, Philipp; Goloubinoff, Pierre (2018). Misfolding and aggregation of nascent proteins: a novel mode of toxic cadmium action in vivo. Current Genetics, 64(1):177-181.

Kühnert, Denise; Kouyos, Roger; Shirreff, George; Pečerska, Jūlija; Scherrer, Alexandra U; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Günthard, Huldrych F; Stadler, Tanja; Bonhoeffer, Sebastian; Swiss HIV Cohort Study (2018). Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics. PLoS Pathogens, 14(2):e1006895.

Stange, Madlen; Sánchez-Villagra, Marcelo R; Salzburger, Walter; Matschiner, Michael (2018). Bayesian Divergence-Time Estimation with Genome-Wide SNP Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus. Systematic Biology, 67(4):681-699.

Vlot, Marnix; Houkes, Joep; Lochs, Silke J A; Swarts, Daan C; Zheng, Peiyuan; Kunne, Tim; Mohanraju, Prarthana; Anders, Carolin; Jinek, Martin; van der Oost, John; Dickman, Mark J; Brouns, Stan J J (2018). Bacteriophage DNA glucosylation impairs target DNA binding by type I and II but not by type V CRISPR-Cas effector complexes. Nucleic Acids Research, 46(2):873-885.

Bouilly, Justine; Messina, Andrea; Papadakis, Georgios; Cassatella, Daniele; Xu, Cheng; Acierno, James S; Tata, Brooke; Sykiotis, Gerasimos; Santini, Sara; Sidis, Yisrael; Elowe-Gruau, Eglantine; Phan-Hug, Franziska; Hauschild, Michael; Bouloux, Pierre-Marc; Quinton, Richard; Lang-Muritano, Mariarosaria; Favre, Lucie; Marino, Laura; Giacobini, Paolo; Dwyer, Andrew A; Niederländer, Nicolas J; Pitteloud, Nelly (2018). DCC/NTN1 complex mutations in patients with congenital hypogonadotropic hypogonadism impair GnRH neuron development. Human Molecular Genetics, 27(2):359-372.

Siebenhüner, Alexander R; Seifert, Heike; Bachmann, Helga; Seifert, Burkhardt; Winder, Thomas; Feilchenfeldt, Jonas; Breitenstein, Stefan; Clavien, Pierre-Alain; Stupp, Roger; Knuth, Alexander; Pestalozzi, Bernhard; Samaras, Panagiotis (2018). Adjuvant treatment of resectable biliary tract cancer with cisplatin plus gemcitabine: A prospective single center phase II study. BMC Cancer, 18(1):72.

Liao, Wen Bo; Huang, Yan; Zeng, Yu; Zhong, Mao Jun; Luo, Yi; Lüpold, Stefan (2018). Ejaculate evolution in external fertilizers: Influenced by sperm competition or sperm limitation? Evolution, 72(1):4-17.

Shao, Wenguang; Pedrioli, Patrick G A; Wolski, Witold; Scurtescu, Cristian; Schmid, Emanuel; Vizcaíno, Juan A; Courcelles, Mathieu; Schuster, Heiko; Kowalewski, Daniel; Marino, Fabio; Arlehamn, Cecilia S L; Vaughan, Kerrie; Peters, Bjoern; Sette, Alessandro; Ottenhoff, Tom H M; Meijgaarden, Krista E; Nieuwenhuizen, Natalie; Kaufmann, Stefan H E; Schlapbach, Ralph; Castle, John C; Nesvizhskii, Alexey I; Nielsen, Morten; Deutsch, Eric W; Campbell, David S; Moritz, Robert L; Zubarev, Roman A; Ytterberg, Anders Jimmy; Purcell, Anthony W; Marcilla, Miguel; Paradela, Alberto; et al (2018). The SysteMHC Atlas project. Nucleic Acids Research, 46(D1):D1237-D1247.

Benzing, Valentin; Eggenberger, Noëmi; Spitzhüttl, Janine; Siegwart, Valerie; Pastore-Wapp, Manuela; Kiefer, Claus; Slavova, Nedelina; Grotzer, Michael; Heinks, Theda; Schmidt, Mirko; Conzelmann, Achim; Steinlin, Maja; Everts, Regula; Leibundgut, Kurt (2018). The Brainfit study: efficacy of cognitive training and exergaming in pediatric cancer survivors - a randomized controlled trial. BMC Cancer, 18(1):18.

Särkinen, Tiina; Kottner, Soren; Stuppy, Wolfgang; Ahmed, Farah; Knapp, Sandra (2018). A new commelinid monocot seed fossil from the early Eocene previously identified as Solanaceae. American Journal of Botany, 105(1):95-107.

Bertels, Frederic; Marzel, Alex; Leventhal, Gabriel; Mitov, Venelin; Fellay, Jacques; Günthard, Huldrych F; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Battegay, Manuel; Rauch, Andri; Cavassini, Matthias; Calmy, Alexandra; Bernasconi, Enos; Schmid, Patrick; Scherrer, Alexandra U; Müller, Viktor; Bonhoeffer, Sebastian; Kouyos, Roger; Regoes, Roland R; Swiss HIV Cohort Study (2018). Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T Cell Decline and Per-Parasite Pathogenicity. Molecular Biology and Evolution, 35(1):27-37.

Toljagić, Olja; Voje, Kjetil L; Matschiner, Michael; Liow, Lee Hsiang; Hansen, Thomas F (2018). Millions of Years Behind: Slow Adaptation of Ruminants to Grasslands. Systematic Biology, 67(1):145-157.

Bittner, L; Wyck, S; Herrera, C; Siuda, M; Wrenzycki, C; van Loon, B; Bollwein, Heiner (2018). Negative effects of oxidative stress in bovine spermatozoa on in vitro development and DNA integrity of embryos. Reproduction, Fertility and Development, 30(10):1359-1368.

Stritt, Christoph; Gordon, Sean P; Wicker, Thomas; Vogel, John P; Roulin, Anne C (2018). Recent activity in expanding populations and purifying selection have shaped transposable element landscapes across natural accessions of the mediterranean grass brachypodium distachyon. Genome Biology and Evolution, 10(1):304-318.

Schelch, Karin; Kirschner, Michaela B; Williams, Marissa; Cheng, Yuen Y; van Zandwijk, Nico; Grusch, Michael; Reid, Glen (2018). A link between the fibroblast growth factor axis and the miR-16 family reveals potential new treatment combinations in mesothelioma. Molecular Oncology, 12(1):58-73.

Winn, Shelley R; Scherer, Tanja; Thöny, Beat; Ying, Ming; Martinez, Aurora; Weber, Sydney; Raber, Jacob; Harding, Cary O (2018). Blood phenylalanine reduction corrects CNS dopamine and serotonin deficiencies and partially improves behavioral performance in adult phenylketonuric mice. Molecular Genetics and Metabolism, 123(1):6-20.

Blau, Nenad; Martinez, Aurora; Hoffmann, Georg F; Thöny, Beat (2018). DNAJC12 deficiency: A new strategy in the diagnosis of hyperphenylalaninemias. Molecular Genetics and Metabolism, 123(1):1-5.

Pasutto, Francesca; Flinter, Frances; Rauch, Anita; Reis, André (2018). Novel STRA6 null mutations in the original family described with Matthew-Wood syndrome. American Journal of Medical Genetics. Part A, 176(1):134-138.

Reh, Lucia; Magnus, Carsten; Kadelka, Claus; Kühnert, Denise; Uhr, Therese; Weber, Jacqueline; Morris, Lynn; Moore, Penny L; Trkola, Alexandra (2018). Phenotypic deficits in the HIV-1 envelope are associated with the maturation of a V2-directed broadly neutralizing antibody lineage. PLoS Pathogens, 14:e1006825.

Siliņa, Karīna; Burkhardt, Chiara; Casanova, Ruben; Solterman, Alex; van den Broek, Maries (2018). A Quantitative Pathology Approach to Analyze the Development of Human Cancer-Associated Tertiary Lymphoid Structures. In: Dieu-Nosjean, Marie-Caroline. Tertiary Lymphoid Structures : Methods and Protocols. Switzerland: Springer, 71-86.

Boucher, Florian C; Démery, Vincent; Conti, Elena; Harmon, Luke J; Uyeda, Josef (2018). A general model for estimating macroevolutionary landscapes. Systematic Biology, 67(2):304-319.

Noben, Sarah; Kessler, Michael; Weigand, Anna; Tejedor, Adrian; Rodríguez Duque, Wison D; Giraldo Gallego, Luis Fernando; Lehnert, Marcus (2018). A taxonomic and biogeographic reappraisal of the genus Dicksonia (Dicksoniaceae) in the Neotropics. Systematic Botany, 43(4):839-857.

Manske, Christian; Finsel, Ivo; Hoffmann, Christine; Hilbi, Hubert (2018). Analysis of Legionella Metabolism by Pathogen Vacuole Proteomics. Methods in Molecular Biology, 1841:59-76.

Sundue, Michael; Olivares, Ingrid; Kessler, Michael (2018). Ascogrammitis lehnertii (Polypodiaceae): a new and dominant understory-species from a diverse community of grammitid ferns in the Andes of Ecuador. Systematic Botany, 43(3):709-716.

Ferrari, Giada; Lischer, Heidi; Neukamm, Judith; Rayo, Enrique; Borel, Nicole; Pospischil, Andreas; Rühli, Frank; Bouwman, Abigail; Campana, Michael (2018). Assessing Metagenomic Signals Recovered from Lyuba, a 42,000-Year-Old Permafrost-Preserved Woolly Mammoth Calf. Genes, 9(9):436.

Ingold, Sabrina; Dørum, Guro; Hanson, E; et al (2018). Body fluid identification using a targeted mRNA massively parallel sequencing approach – results of a EUROFORGEN/EDNAP collaborative exercise. Forensic Science International. Genetics, 34:105-115.

Głogowski, Robert; Pérez, William; Clauss, Marcus (2018). Body size and gastrointestinal morphology of nutria (Myocastor coypus) reared on an extensive or intensive feeding regime. Journal of Animal Science, 96(9):3728-3737.

Sauquet, Hervé; von Balthazar, Maria; Doyle, James A; Endress, Peter K; Magallón, Susana; Staedler, Yannick; Schönenberger, Jürg (2018). Challenges and questions in reconstructing the ancestral flower of angiosperms: A reply to Sokoloff et al. American Journal of Botany, 105(2):127-135.

Das, Aditi; Guyer, Luzia; Hörtensteiner, Stefan (2018). Chlorophyll and Chlorophyll Catabolite Analysis by HPLC. In: Guo, Yongfeng. Plant Senescence : Methods and Protocols. New York: Springer, 223-235.

Asadollahi, Reza; Strauss, Justin E; Zenker, Martin; Beuing, Oliver; Edvardson, Simon; Elpeleg, Orly; Strom, Tim M; Joset, Pascal; Niedrist, Dunja; Otte, Christine; Oneda, Beatrice; Boonsawat, Paranchai; Azzarello-Burri, Silvia; Bartholdi, Deborah; Papik, Michael; Zweier, Markus; Haas, Cordula; Ekici, Arif B; Baumer, Alessandra; Boltshauser, Eugen; Steindl, Katharina; Nothnagel, Michael; Schinzel, Albert; Stoeckli, Esther T; Rauch, Anita (2018). Clinical and experimental evidence suggest a link between KIF7 and C5orf42-related ciliopathies through Sonic Hedgehog signaling. European Journal of Human Genetics, 26(2):197-209.

Stevens, Marc J A; Zurfluh, Katrin; Althaus, D; Corti, S; Lehner, Angelika; Stephan, Roger (2018). Complete and assembled genome sequence of Salmonella enterica subsp. enterica serotype Senftenberg N17-509, a strain lacking Salmonella pathogen island SPI-1. Genome Announcements, 6(12):e00156-18.

Stevens, Marc J A; Zurfluh, Katrin; Stephan, Roger (2018). Complete and assembled genome sequences of Pantoea calida DSM22759T and Pantoea gaviniae DSM22758T. Genome Announcements, 6(12):e00157-18.

Wist, Valerie; Kubacki, Jakub; Lechmann, Julia; Steck, Marco; Fraefel, Cornel; Stephan, Roger; Bachofen, Claudia (2018). Complete genome sequence of a Swiss Hepatitis E virus isolate from the liver of a fattening pig. Genome Announcements, 6(9):e00113-18.

Lavin, Matt; Pennington, R Toby; Hughes, Colin E; Lewis, Gwilym P; Delgado-Salinas, Alfonso; Duno de Stefano, Rodrigo; de Queiroz, Luciano P; Cardoso, Domingos; Wojciechowski, Martin F (2018). DNA sequence variation among conspecific accessions of the legume Coursetia caribaea reveals geographically localized clades here ranked as species. Systematic Botany, 43(3):664-675.

Wambui, J; Stevens, M; Njage, P M K; Wüthrich, D; Egli, Adrian; Stephan, Roger; Tasara, Taurai (2018). Draft genome sequences of Enterococcus mundtii strains isolated from beef slaughterhouses in Kenya. Genome Announcements, 6(21):e00446-18.

Jang, H; Woo, J; Lee, Y; Negrete, F; Finkelstein, S; Chase, H R; Addy, N; Ewing, L; Gilles Beaubrun, J J; Patel, I; Gangiredla, J; Eshwar, A; Jaradat, Z W; Seo, K; Shabarinath, S; Fanning, Séamus; Stephan, Roger; Lehner, Angelika; Tall, Ben D; Gopinath, Gopal R (2018). Draft genomes of Cronobacter sakazakii strains isolated from dried spices bring unique insights into the diversity of plant-associated strains. Standards in Genomic Sciences, 13:35.

Pickel, Christina; Taylor, Cormac T; Scholz, Carsten C (2018). Genetic knockdown and pharmacologic inhibition of hypoxia-inducible factor (HIF) hydroxylases. In: Huang, Eric L; Walker, John M. Hypoxia : Methods and Protocols. New York, USA: Springer, 1-14.

Manzo, Massimiliano; Ambrosi, Christina; Baubec, Tuncay (2018). Genome-wide profiling of DNA methyltransferases in mammalian cells. In: Vavouri, Tanya; Peinado, Miguel A. CpG Islands. Berlin, Germany: Springer, 157-174.

Nowak, Albina; Mechtler, Thomas P; Hornemann, Thorsten; Gawinecka, Joanna; Theswet, Eva; Hilz, Max J; Kasper, David C (2018). Genotype, phenotype and disease severity reflected by serum LysoGb3 levels in patients with Fabry disease. Molecular Genetics and Metabolism, 123(2):148-153.

van Spronsen, Francjan J; Himmelreich, Nastassja; Rüfenacht, Véronique; Shen, Nan; van Vliet, Danique; Al-Owain, Mohammed; Ramzan, Khushnooda; Alkhalifi, Salwa M; Lunsing, Roelineke J; Heiner-Fokkema, Rebecca M; Rassi, Anahita; Gemperle-Britschgi, Corinne; Hoffmann, Georg F; Blau, Nenad; Thöny, Beat (2018). Heterogeneous clinical spectrum of DNAJC12-deficient hyperphenylalaninemia: from attention deficit to severe dystonia and intellectual disability. Journal of Medical Genetics, 55(4):249-253.

Brambilla, Alice; Keller, Lukas; Bassano, Bruno; Grossen, Christine (2018). Heterozygosity-fitness correlation at the major histocompatibility complex despite low variation in Alpine ibex (Capra ibex). Evolutionary Applications, 11(5):631-644.

Sbalzarini, Ivo F; Greber, Urs F (2018). How Computational Models Enable Mechanistic Insights into Virus Infection. In: Yamauchi, Yohei. Influenza Virus. New York, NY: Springer, 609-631.

Mainta, Ismini C; Vargas, Maria I; Trombella, Sara; Frisoni, Giovanni B; Unschuld, Paul G; Garibotto, Valentina (2018). Hybrid PET-MRI in Alzheimer's Disease Research. In: Perneczky, Robert. Biomarkers for Alzheimer’s Disease Drug Development. New York, NY: Springer, 185-200.

Liu, Yilei; Pessi, Gabriella; Riedel, Katharina; Eberl, Leo (2018). Identification of AHL- and BDSF-Controlled Proteins in Burkholderia cenocepacia by Proteomics. Methods in Molecular Biology, 1673:193-202.

Ndinyanka Fabrice, Tohnyui; Vogler, Hannes; Draeger, Christian; Munglani, Gautam; Gupta, Shibu; Herger, Aline Galatea; Knox, Paul; Grossniklaus, Ueli; Ringli, Christoph (2018). LRX Proteins play a crucial role in pollen grain and pollen tube cell wall development. Plant Physiology, 176(3):1981-1992.

Sparber, Florian; Dolowschiak, Tamas; Mertens, Sarah; Lauener, Laura; Clausen, Björn E; Joller, Nicole; Stoitzner, Patrizia; Tussiwand, Roxane; LeibundGut-Landmann, Salomé (2018). Langerin+ DCs regulate innate IL-17 production in the oral mucosa during Candida albicans-mediated infection. PLoS Pathogens, 14(5):e1007069.

Simonelli, Luca; Pedotti, Mattia; Bardelli, Marco; Jurt, Simon; Zerbe, Oliver; Varani, Luca (2018). Mapping Antibody Epitopes by Solution NMR Spectroscopy: Practical Considerations. In: Rockberg, Johan; Nilvebrant, Johan. Epitope Mapping Protocols. Berlin: Springer, 29-51.

Abplanalp, Jeannette; Hopp, Ann-Katrin; Hottiger, Michael O (2018). Mono-ADP-Ribosylhydrolase Assays. In: Chang, Paul. ADP-ribosylation and NAD+ Utilizing Enzymes. Zürich: Springer, 205-213.

Germani, Federico; Bergantinos, Cora; Johnston, Laura A (2018). Mosaic Analysis in Drosophila. Genetics, 208(2):473-490.

Hatakeyama, Masaomi; Aluri, Sirisha; Balachadran, Mathi Thumilan; Sivarajan, Sajeevan Radha; Patrignani, Andrea; Grüter, Simon; Poveda, Lucy; Shimizu-Inatsugi, Rie; Baeten, John; Francoijs, Kees-Jan; Nataraja, Karaba N; Reddy, Yellodu A Nanja; Phadnis, Shamprasad; Ravikumar, Ramapura L; Schlapbach, Ralph; Sreeman, Sheshshayee M; Shimizu, Kentaro K (2018). Multiple hybrid de novo genome assembly of finger millet, an orphan allotetraploid crop. DNA Research, 25(1):39-47.

Van den Berge, Koen; Perraudeau, Fanny; Soneson, Charlotte; Love, Michael I; Risso, Davide; Vert, Jean-Philippe; Robinson, Mark D; Dudoit, Sandrine; Clement, Lieven (2018). Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications. Genome Biology, 19:24.

Turko, Patrick; Tellenbach, Christoph; Keller, Esther; Tardent, Nadine; Keller, Barbara; Spaak, Piet; Wolinska, Justyna (2018). Parasites driving host diversity: Incidence of disease correlated with Daphnia clonal turnover. Evolution, 72(3):619-629.

Testo, Weston; Øllgaard, Benjamin; Field, Ashley; Almeida, Thaís; Kessler, Michael; Barrington, David (2018). Phylogenetic systematics, morphological evolution, and natural groups in neotropical Phlegmariurus (Lycopodiaceae). Molecular Phylogenetics and Evolution, 125:1-13.

Grossen, Christine; Biebach, Iris; Angelone-Alasaad, Samer; Keller, Lukas F; Croll, Daniel (2018). Population genomics analyses of European ibex species show lower diversity and higher inbreeding in reintroduced populations. Evolutionary Applications, 11(2):123-139.

Perraki, Artemis; Gronnier, Julien; Gouguet, Paul; Boudsocq, Marie; Deroubaix, Anne-Flore; Simon, Vincent; German-Retana, Sylvie; Legrand, Anthony; Habenstein, Birgit; Zipfel, Cyril; Bayer, Emmanuelle; Mongrand, Sébastien; Germain, Véronique (2018). REM1.3's phospho-status defines its plasma membrane nanodomain organization and activity in restricting PVX cell-to-cell movement. PLoS Pathogens, 14(11):e1007378.

Skaria, Tom; Bachli, Esther; Schoedon, Gabriele (2018). RSPO3 impairs barrier function of human vascular endothelial monolayers and synergizes with pro-inflammatory IL-1. Molecular Medicine:24:45.

Dreier, Birgit; Plückthun, Andreas (2018). Rapid Selection of High-Affinity Antibody scFv Fragments Using Ribosome Display. In: Nevoltris, Damien; Chames, Patrick. Antibody Engineering. Heidelberg: Springer, 235-268.

Zhao, Meng; Steffen, Fabio D; Börner, Richard; Schaffer, Michelle F; Sigel, Roland K O; Freisinger, Eva (2018). Site-specific dual-color labeling of long RNAs for single-molecule spectroscopy. Nucleic Acids Research, 46(3):e13-e13.

Morales-Hojas, Ramiro; Hinsley, Malcolm; Armean, Irina M; Silk, Rhiannon; Harrup, Lara E; Gonzalez-Uriarte, Asier; Veronesi, Eva; Campbell, Lahcen; Nayduch, Dana; Saski, Christopher; Tabachnick, Walter J; Kersey, Paul; Carpenter, Simon; Fife, Mark (2018). The genome of the biting midge Culicoides sonorensis and gene expression analyses of vector competence for bluetongue virus. BMC Genomics:19:624.

Knopfová, L; Biglieri, E; Volodko, N; Masařík, M; Hermanová, M; Glaus Garzón, J F; Dúcka, M; Kučírková, T; Souček, K; Šmarda, J; Beneš, P; Borsig, L (2018). Transcription factor c-Myb inhibits breast cancer lung metastasis by suppression of tumor cell seeding. Oncogene, 37(8):1020-1030.

Sucher, J; Menardo, F; Praz, C R; Boni, R; Krattinger, S G; Keller, B (2018). Transcriptional profiling reveals no response of fungal pathogens to the durable, quantitative Lr34 disease resistance gene of wheat. Plant Biology, 67(4):792-798.

Fabrice, Tohnyui Ndinyanka; Cherkezyan, Lusik; Ringli, Christoph; Baroux, Célia (2018). Transmission electron microscopy imaging to analyze chromatin density distribution at the nanoscale level. In: Bemer, Marian; Baroux, Célia. Plant Chromatin Dynamics : Methods and Protocols. New York, NY: Springer, 633-651.

Müller, Thomas; Schierscher-Viret, Beate; Fossati, Dario; Brabant, Cécile; Schori, Arnold; Keller, Beat; Krattinger, Simon G (2018). Unlocking the diversity of genebanks: whole-genome marker analysis of Swiss bread wheat and spelt. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 131(2):407-416.

Jang, H; Addy, N; Ewing, L; Gilles Beaubrun, J J; Lee, Y Y; Woo, J H; Negrete, F; Finkelstein, S; Tall, B D; Lehner, A; Eshwar, A; Gopinath, G (2018). Whole-genome sequences of Cronobacter sakazakii isolates obtained from plant-origin foods and dried food manufacturing environments. Genome Announcements, 6(15):e00223-18.

Horlbog, Jule Anna; Jang, H; Gopinath, G; Stephan, Roger; Guldimann, Claudia (2018). Whole-genome sequences of six Listeria monocytogenes strains isolated from food. Microbiology Resource Announcements, 7(14):e01036-18.

Ziegler, Matthias; Jang, H; Gopinath, G; Horlbog, Jule Anna; Stephan, Roger; Guldimann, Claudia (2018). Whole-genome shotgun sequencing of three listeria monocytogenes strains isolated from a ready-to-eat salad-producing facility in Switzerland. Genome Announcements, 6(26):e00547-18.

2017

Ojeda Naharros, Irene; Gesemann, Matthias; Mateos, José M; Barmettler, Gery; Forbes, Austin; Ziegler, Urs; Neuhauss, Stephan C F; Bachmann-Gagescu, Ruxandra (2017). Loss-of-function of the ciliopathy protein Cc2d2a disorganizes the vesicle fusion machinery at the periciliary membrane and indirectly affects Rab8-trafficking in zebrafish photoreceptors. PLoS Genetics, 13(12):e1007150.

Omasits, Ulrich; Varadarajan, Adithi R; Schmid, Michael; Goetze, Sandra; Melidis, Damianos; Bourqui, Marc; Nikolayeva, Olga; Québatte, Maxime; Patrignani, Andrea; Dehio, Christoph; Frey, Juerg E; Robinson, Mark D; Wollscheid, Bernd; Ahrens, Christian H (2017). An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics. Genome Research, 27(12):2083-2095.

Lardi, Martina; Liu, Yilei; Purtschert, Gabriela; Bolzan de Campos, Samanta; Pessi, Gabriella (2017). Transcriptome Analysis of Paraburkholderia phymatum under Nitrogen Starvation and during Symbiosis with Phaseolus Vulgaris. Genes, 8(12):E389.

Tan, Tiong Yang; Gonzaga-Jauregui, Claudia; Bhoj, Elizabeth J; et al; Steindl, Katharina; Joset, Pascal; Rauch, Anita (2017). Monoallelic BMP2 Variants Predicted to Result in Haploinsufficiency Cause Craniofacial, Skeletal, and Cardiac Features Overlapping Those of 20p12 Deletions. American Journal of Human Genetics, 101(6):985-994.

Rafiullah, Rafiullah; Long, Alyssa B; Ivanova, Anna A; Ali, Hazrat; Berkel, Simone; Mustafa, Ghulam; Paramasivam, Nagarajan; Schlesner, Matthias; Wiemann, Stefan; Wade, Rebecca C; Bolthauser, Eugen; Blum, Martin; Kahn, Richard A; Caspary, Tamara; Rappold, Gudrun A (2017). A novel homozygous ARL13B variant in patients with Joubert syndrome impairs its guanine nucleotide-exchange factor activity. European Journal of Human Genetics, 25(12):1324-1334.

Colombo, Daniele F; Burger, Lukas; Baubec, Tuncay; Schübeler, Dirk (2017). Binding of high mobility group A proteins to the mammalian genome occurs as a function of AT-content. PLoS Genetics, 13(12):e1007102.

Nolting, Kristine; Park, Julien H; Tegtmeyer, Laura C; Zühlsdorf, Andrea; Grüneberg, Marianne; Rust, Stephan; Reunert, Janine; Du Chesne, Ingrid; Debus, Volker; Schulze-Bahr, Eric; Baxter, Robert C; Wada, Yoshinao; Thiel, Christian; van Schaftingen, Emile; Fingerhut, Ralph; Marquardt, Thorsten (2017). Limitations of galactose therapy in phosphoglucomutase 1 deficiency. Molecular Genetics and Metabolism Reports, 13:33-40.

Muir, Dylan R; Molina-Luna, Patricia; Roth, Morgane M; Helmchen, Fritjof; Kampa, Björn M (2017). Specific excitatory connectivity for feature integration in mouse primary visual cortex. PLoS Computational Biology, 13(12):e1005888.

Manser, Andri; Lindholm, Anna K; Weissing, Franz J (2017). The evolution of costly mate choice against segregation distorters. Evolution, 71(12):2817-2828.

Grünblatt, Edna; Oneda, Beatrice; Ekici, Arif B; Ball, Juliane; Geissler, Julia; Uebe, Steffen; Romanos, Marcel; Rauch, Anita; Walitza, Susanne (2017). High resolution chromosomal microarray analysis in paediatric obsessive-compulsive disorder. BMC Medical Genomics, 10(1):68.

Goniotaki, Despoina; Lakkaraju, Asvin K K; Shrivastava, Amulya N; Bakirci, Pamela; Sorce, Silvia; Senatore, Assunta; Marpakwar, Rajlakshmi; Hornemann, Simone; Gasparini, Fabrizio; Triller, Antoine; Aguzzi, Adriano (2017). Inhibition of group-I metabotropic glutamate receptors protects against prion toxicity. PLoS Pathogens, 13(11):e1006733.

Schreiner, Bettina; Greter, Melanie (2017). EMPhasis on Mutant Microglia: Dysregulation of Brain Sentinels Induces Neurodegeneration. Cell Stem Cell, 21(5):566-568.

Köhler, Corinna; Nittner, David; Rambow, Florian; Radaelli, Enrico; Stanchi, Fabio; Vandamme, Niels; Baggiolini, Arianna; Sommer, Lukas; Berx, Geert; van den Oord, Joost J; Gerhardt, Holger; Blanpain, Cedric; Marine, Jean-Christophe (2017). Mouse Cutaneous Melanoma Induced by Mutant BRaf Arises from Expansion and Dedifferentiation of Mature Pigmented Melanocytes. Cell Stem Cell, 21(5):679-693.e6.

Stäubli, Andrina; Capatina, Nadejda; Fuhrer, Yvonne; Munier, Francis L; Labs, Stephan; Schorderet, Daniel F; Tiwari, Amit; Verrey, Francois; Heon, Elise; Cheng, Ching-Yu; Wong, Tien-Yin; Berger, Wolfgang; Camargo, Simone M R; Kloeckener-Gruissem, Barbara (2017). Abnormal creatine transport of mutations in monocarboxylate transporter 12 (MCT12) found in patients with age-related cataract can be partially rescued by exogenous chaperone CD147. Human Molecular Genetics, 26(21):4203-4214.

Auranen, Mari; Toppila, Jussi; Suriyanarayanan, Saranya; Lone, Museer A; Paetau, Anders; Tyynismaa, Henna; Hornemann, Thorsten; Ylikallio, Emil (2017). Clinical and metabolic consequences of L-serine supplementation in hereditary sensory and autonomic neuropathy type 1C. Molecular Case Studies, 3(6):a002212.

Deiner, Kristy; Bik, Holly M; Mächler, Elvira; Seymour, Mathew; Lacoursière-Roussel, Anaïs; Altermatt, Florian; Creer, Simon; Bista, Iliana; Lodge, David M; de Vere, Natasha; Pfrender, Michael E; Bernatchez, Louis (2017). Environmental DNA metabarcoding: Transforming how we survey animal and plant communities. Molecular Ecology, 26(21):5872-5895.

Anugraham, Merrina; Jacob, Francis; Everest-Dass, Arun V; Schoetzau, Andreas; Nixdorf, Sheri; Hacker, Neville F; Fink, Daniel; Heinzelmann-Schwarz, Viola; Packer, Nicolle H (2017). Tissue glycomics distinguish tumour sites in women with advanced serous adenocarcinoma. Molecular Oncology, 11(11):1595-1615.

Yao, Lu; Li, Hongjie; Martin, Robert D; Moreau, Corrie S; Malhi, Ripan S (2017). Tracing the phylogeographic history of Southeast Asian long-tailed macaques through mitogenomes of museum specimens. Molecular Phylogenetics and Evolution, 116:227-238.

Ashcroft, Peter; Manz, Markus G; Bonhoeffer, Sebastian (2017). Clonal dominance and transplantation dynamics in hematopoietic stem cell compartments. PLoS Computational Biology, 13(10):e1005803.

Kotelnikova, Ekaterina; Kiani, Narsis A; Abad, Elena; Martinez-Lapiscina, Elena H; Andorra, Magi; Zubizarreta, Irati; Pulido-Valdeolivas, Irene; Pertsovskaya, Inna; Alexopoulos, Leonidas G; Olsson, Tomas; Martin, Roland; Paul, Friedemann; Tegnér, Jesper; Garcia-Ojalvo, Jordi; Villoslada, Pablo (2017). Dynamics and heterogeneity of brain damage in multiple sclerosis. PLoS Computational Biology, 13(10):e1005757.

Steiner, Bernhard; Swart, Anna Leoni; Welin, Amanda; Weber, Stephen; Personnic, Nicolas; Kaech, Andres; Freyre, Christophe; Ziegler, Urs; Klemm, Robin W; Hilbi, Hubert (2017). ER remodeling by the large GTPase atlastin promotes vacuolar growth of Legionella pneumophila. EMBO Reports, 18(10):1817-1836.

Stainier, Didier Y R; Raz, Erez; Lawson, Nathan D; Ekker, Stephen C; Burdine, Rebecca D; Eisen, Judith S; Ingham, Philip W; Schulte-Merker, Stefan; Yelon, Deborah; Weinstein, Brant M; Mullins, Mary C; Wilson, Stephen W; Ramakrishnan, Lalita; Amacher, Sharon L; Neuhauss, Stephan C F; Meng, Anming; Mochizuki, Naoki; Panula, Pertti; Moens, Cecilia B (2017). Guidelines for morpholino use in zebrafish. PLoS Genetics, 13(10):e1007000.

Losfeld, Marie-Estelle; Scibona, Ernesto; Lin, Chia-Wei; Villiger, Thomas K; Gauss, Robert; Morbidelli, Massimo; Aebi, Markus (2017). Influence of protein/glycan interaction on site-specific glycan heterogeneity. FASEB Journal, 31(10):4623-4635.

de Groot, Claire; Floriou-Servou, Amalia; Tsai, Yuan-Chen; Früh, Simon; Kohler, Manuela; Parkin, Georgia; Schwerdel, Cornelia; Bosshard, Giovanna; Kaila, Kai; Fritschy, Jean-Marc; Tyagarajan, Shiva K (2017). RhoGEF9 splice isoforms influence neuronal maturation and synapse formation downstream of α2 GABAA receptors. PLoS Genetics, 13(10):e1007073.

Botelho, João Francisco; Smith-Paredes, Daniel; Soto-Acuña, Sergio; Núñez-León, Daniel; Palma, Verónica; Vargas, Alexander O (2017). Greater growth of proximal metatarsals in bird embryos and the evolution of hallux position in the grasping foot. Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution, 328(1-2):106-118.

Ineichen, Christian; Biller-Andorno, Nikola; Deplazes-Zemp, Anna (2017). Image of Synthetic Biology and Nanotechnology: A Survey among University Students. Frontiers in Genetics, 8:122.

Grünert, Sarah Catharina; Schmitt, Robert Niklas; Schlatter, Sonja Marina; Gemperle-Britschgi, Corinne; Balcı, Mehmet Cihan; Berg, Volker; Çoker, Mahmut; Das, Anibh M; Demirkol, Mübeccel; Derks, Terry G.J; Gökçay, Gülden; Uçar, Sema Kalkan; Konstantopoulou, Vassiliki; Korenke, G Christoph; Lotz-Havla, Amelie Sophia; Schlune, Andrea; Staufner, Christian; Tran, Christel; Visser, Gepke; Schwab, Karl Otfried; Fukao, Toshiyuki; Sass, Jörn Oliver (2017). Clinical presentation and outcome in a series of 32 patients with 2-methylacetoacetyl-coenzyme A thiolase (MAT) deficiency. Molecular Genetics and Metabolism, 122(1-2):67-75.

Makhro, Asya; Kaestner, Lars; Bogdanova, Anna (2017). NMDA receptor activity in circulating red blood cells: methods of detection. In: Burnashev, Nail; Szepetowski, Pierre. NMDA Receptors. Hatfield, Hertfordshire, UK: Springer, 265-282.

Panje, Cédric; Riesterer, Oliver; Glanzmann, Christoph; Studer, Gabriela (2017). Neutrophil-lymphocyte ratio complements volumetric staging as prognostic factor in patients treated with definitive radiotherapy for oropharyngeal cancer. BMC Cancer, 17(1):643.

Sterken, Mark G; van Bemmelen van der Plaat, Linda; Riksen, Joost A G; Rodriguez, Miriam; Schmid, Tobias; Hajnal, Alex; Kammenga, Jan E; Snoek, Basten L (2017). Ras/MAPK Modifier Loci Revealed by eQTL in Caenorhabditis elegans. G3 : Genes, Genomes, Genetics, 7(9):3185-3193.

Niklaus, Stephanie; Neuhauss, Stephan C F (2017). Genetic approaches to retinal research in zebrafish. Journal of Neurogenetics, 31(3):70-87.

Asadollahi, Reza; Zweier, Markus; Gogoll, Laura; Schiffmann, Raphael; Sticht, Heinrich; Steindl, Katharina; Rauch, Anita (2017). Genotype-phenotype evaluation of MED13L defects in the light of a novel truncating and a recurrent missense mutation. European Journal of Medical Genetics, 60(9):451-464.

Thind, Anupriya K; Wicker, Thomas; Krattinger, Simon G (2017). Rapid identification of rust resistance genes through cultivar-specific de novo chromosome assemblies. In: Periyannan, Sam. Wheat Rust Diseases. New York, NY: Springer, 245-255.

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