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2024

Bhatia, Sonal; Le Cam, Yann; Carrion, Juan; Diamond, Lauren; Fennessy, Paul; Gassman, Safiyya; Gutzwiller, Felix; Kagan, Stephen; Pankevich, Diana; Young Maloney, Jennifer; Mahadev, Nitin; Schulz, Martin; Wong-Rieger, Durhane; Morgese, Paolo (2024). Strengthening health systems for access to gene therapy in rare genetic disorders. Molecular Therapy - Methods & Clinical Development, 32(2):101220.

Volkova, Yulia L; Jucht, Agnieszka E; Oechsler, Nina; Krishnankutty, Roopesh; von Kriegsheim, Alex; Wenger, Roland H; Scholz, Carsten C (2024). Selective Hypoxia-Sensitive Oxomer Formation by FIH Prevents Binding of the NF-κB Inhibitor IκBβ to NF-κB Subunits. Molecular and Cellular Biology, 44(4):138-148.

Schmidt, Robin; Dufresnes, Christophe; Krištín, Anton; Künzel, Sven; Vences, Miguel; Hawlitschek, Oliver (2024). Phylogenetic insights into Central European Chorthippus and Pseudochorthippus (Orthoptera: Acrididae) species using ddRADseq data. Molecular Phylogenetics and Evolution, 193:108012.

Müller, Jonas A; Krenn, Viktoria A; Böni, Thomas; Haeusler, Martin (2024). The influence of lumbosacral transitional vertebrae on lumbar lordosis and the angle of pelvic incidence. Journal of Anatomy, 244(4):594-600.

Smith, Ellery; Paloots, Rahel; Giagkos, Dimitris; Baudis, Michael; Stockinger, Kurt (2024). Data-driven information extraction and enrichment of molecular profiling data for cancer cell lines. Bioinformatics advances, 4(1):vbae045.

Ren, Wuwei; Ni, Ruiqing (2024). Noninvasive Visualization of Amyloid-Beta Deposits in Alzheimer’s Amyloidosis Mice via Fluorescence Molecular Tomography Using Contrast Agent. In: Perneczky, Robert. Biomarkers for Alzheimer’s Disease Drug Development. New York, NY: Springer, 271-285.

Schmidheini, Lukas; Mathis, Nicolas; Marquart, Kim Fabiano; Rothgangl, Tanja; Kissling, Lucas; Böck, Desirée; Chanez, Christelle; Wang, Jingrui Priscilla; Jinek, Martin; Schwank, Gerald (2024). Continuous directed evolution of a compact CjCas9 variant with broad PAM compatibility. Nature Chemical Biology, 20(3):333-343.

Gousopoulos, Epameinondas (2024). Deciphering the Pathobiological Impairment Mechanisms of the Lymphatic System during Secondary Lymphedema Progression. Journal of Investigative Dermatology, 144(3):451-452.

Singer, Martina; Codron, Daryl; Lechner, Isabel; Rudnik, Rebecca; Barboza, Perry; Hummel, Jürgen; Clauss, Marcus (2024). The effect of size and density on the mean retention time of particles in reindeer (Rangifer tarandus). Comparative Biochemistry and Physiology. Part A, Molecular & Integrative Physiology, 292:111621.

Giacomini, Elisa; Pagliardini, Luca; Minetto, Sabrina; Pinna, Monica; Kleeman, Fabiola; Bonesi, Francesca; Makieva, Sofia; Pavone, Valentina; Reschini, Marco; Papaleo, Enrico; Candiani, Massimo; Somigliana, Edgardo; Viganò, Paola (2024). The relationship between CYP19A1 gene expression in luteinized granulosa cells and follicular estradiol output in women with endometriosis. Journal of Steroid Biochemistry and Molecular Biology, 237:106439.

Klinnert, Sarah; Schenkel, Corinne D; Freitag, Patrick C; Günthard, Huldrych F; Plückthun, Andreas; Metzner, Karin J (2024). Targeted shock-and-kill HIV-1 gene therapy approach combining CRISPR activation, suicide gene tBid and retargeted adenovirus delivery. Gene Therapy, 31(3-4):74-84.

Prete, Alessandro; Lang, Katharina; Pavlov, David; Rhayem, Yara; Sitch, Alice J; Franke, Anna S; Gilligan, Lorna C; Shackleton, Cedric H L; Hahner, Stefanie; Quinkler, Marcus; Dekkers, Tanja; Deinum, Jaap; Reincke, Martin; Beuschlein, Felix; Biehl, Michael; Arlt, Wiebke (2024). Urine steroid metabolomics as a diagnostic tool in primary aldosteronism. Journal of Steroid Biochemistry and Molecular Biology, 237:106445.

Georgiadis, Foivos; Larivière, Sara; Glahn, David; Hong, L Elliot; Kochunov, Peter; Mowry, Bryan; Loughland, Carmel; Pantelis, Christos; Henskens, Frans A; Green, Melissa J; Cairns, Murray J; Michie, Patricia T; Rasser, Paul E; Catts, Stanley; Tooney, Paul; Scott, Rodney J; Schall, Ulrich; Carr, Vaughan; Quidé, Yann; Krug, Axel; Stein, Frederike; Nenadić, Igor; Brosch, Katharina; Ji, Ellen; Homan, Stephanie; Omlor, Wolfgang; Homan, Philipp; Seifritz, Erich; ENIGMA Schizophrenia Consortium; Kirschner, Matthias; et al (2024). Connectome architecture shapes large-scale cortical alterations in schizophrenia: a worldwide ENIGMA study. Molecular Psychiatry:Epub ahead of print.

Rupasinghe, Meneka; Bersaglieri, Cristiana; Leslie Pedrioli, Deena M; Pedrioli, Patrick Ga; Panatta, Martina; Hottiger, Michael O; Cinelli, Paolo; Santoro, Raffaella (2024). PRAMEL7 and CUL2 decrease NuRD stability to establish ground-state pluripotency. EMBO Reports, 25(3):1453-1468.

Hleihil, Mohammad; Benke, Dietmar (2024). Restoring GABA$_{B}$ receptor expression in the ventral tegmental area of methamphetamine addicted mice inhibits locomotor sensitization and drug seeking behavior. Frontiers in Molecular Neuroscience, 17:1347228.

Benvenga, Vanni; Cuénod, Aline; Purushothaman, Srinithi; Dasen, Gottfried; Weisser, Maja; Bassetti, Stefano; Roloff, Tim; Siegemund, Martin; Heininger, Ulrich; Bielicki, Julia; Wehrli, Marianne; Friderich, Paul; Frei, Reno; Widmer, Andreas; Herzog, Kathrin; Fankhauser, Hans; Nolte, Oliver; Bodmer, Thomas; Risch, Martin; Dubuis, Olivier; Pranghofer, Sigrid; Calligaris-Maibach, Romana; Graf, Susanne; Perreten, Vincent; Seth-Smith, Helena M B; Egli, Adrian (2024). Historic methicillin-resistant Staphylococcus aureus: expanding current knowledge using molecular epidemiological characterization of a Swiss legacy collection. Genome Medicine, 16(1):23.

Camenzind, Marcela; Koller, Teresa; Armbruster, Cygni; Jung, Esther; Brunner, Susanne; Herren, Gerhard; Keller, Beat (2024). Breeding for durable resistance against biotrophic fungal pathogens using transgenes from wheat. Molecular Breeding, 44(2):8.

Erkner, Estelle; Hentrich, Thomas; Schairer, Rebekka; Fitzel, Rahel; Secker-Grob, Kathy-Ann; Jeong, Johan; Keppeler, Hildegard; Korkmaz, Fulya; Schulze-Hentrich, Julia M; Lengerke, Claudia; Schneidawind, Dominik; Schneidawind, Corina (2024). The RORɣ/SREBP2 pathway is a master regulator of cholesterol metabolism and serves as potential therapeutic target in t(4;11) leukemia. Oncogene, 43(4):281-293.

Mai, Dat; Jahn, Ana; Murray, Tara; Morikubo, Michael; Lim, Pamelia N; Cervantes, Maritza M; Pham, Linh K; Nemeth, Johannes; Urdahl, Kevin; Diercks, Alan H; Aderem, Alan; Rothchild, Alissa C (2024). Exposure to Mycobacterium remodels alveolar macrophages and the early innate response to Mycobacterium tuberculosis infection. PLoS Pathogens, 20(1):e1011871.

Hofer, Cyrill; Wälchli, Denise; Moncadas, Lucas Serra; Rain-Franco, Angel; Andrei, Adrian-Stefan (2024). A high-quality genome of an undescribed Flavobacterium species uncovered using Q20+ Nanopore chemistry. Microbiology Resource Announcements, 13(1):online.

Ruchti, Fiorella; Tuor, Meret; Mathew, Liya; McCarthy, Neil E; LeibundGut-Landmann, Salomé (2024). γδ T cells respond directly and selectively to the skin commensal yeast Malassezia for IL-17-dependent fungal control. PLoS Pathogens, 20(1):e1011668.

Rubio, Jose M; Lencz, Todd; Cao, Hengyi; Kraguljac, Nina; Dhamala, Elvisha; Homan, Philipp; Horga, Guillermo; Sarpal, Deepak K; Argyelan, Miklos; Gallego, Juan; Cholewa, John; Barber, Anita; Kane, John M; Malhotra, Anil K (2024). Replication of a neuroimaging biomarker for striatal dysfunction in psychosis. Molecular Psychiatry:Epub ahead of print.

Meyer, Lasse; Eling, Nils; Bodenmiller, Bernd (2024). cytoviewer: an R/Bioconductor package for interactive visualization and exploration of highly multiplexed imaging data. BMC Bioinformatics, 25(1):9.

Balázs, Zsolt; Gitchev, Todor; Ivanković, Ivna; Krauthammer, Michael (2024). Fragmentstein—facilitating data reuse for cell-free DNA fragment analysis. Bioinformatics, 40(1):btae017.

Luciani, Alessandro; Devuyst, Olivier (2024). The CTNS-MTORC1 axis couples lysosomal cystine to epithelial cell fate decisions and is a targetable pathway in cystinosis. Autophagy, 20(1):202-204.

Bradová, Martina; Thompson, Lester D R; Hyrcza, Martin; Vaněček, Tomáš; Grossman, Petr; Michal, Michael; Hájková, Veronika; Taheri, Touraj; Rupp, Niels; Suster, David; Lakhani, Sunil; Nikolov, Dimitar Hadži; Žalud, Radim; Skálová, Alena; Michal, Michal; Agaimy, Abbas (2024). Branchioma: immunohistochemical and molecular genetic study of 23 cases highlighting frequent loss of retinoblastoma 1 immunoexpression. Virchows Archiv, 484(1):103-117.

Olivares, Ingrid; Tusso, Sergio; José Sanín, María; de La Harpe, Marylaure; Loiseau, Oriane; Rolland, Jonathan; Salamin, Nicolas; Kessler, Michael; Shimizu, Kentaro K; Paris, Margot (2024). Hyper-Cryptic radiation of a tropical montane plant lineage. Molecular Phylogenetics and Evolution, 190:107954.

Rhodes, Jack; Zipfel, Cyril (2024). Identification of Bioactive Phytocytokines Using Transcriptomic Data and Plant Bioassays. In: Schaller, Andreas. Plant Peptide Hormones and Growth Factors. New York: Springer, 23-35.

Volkova, Yulia L; Jucht, Agnieszka E; Scholz, Carsten C (2024). Oxomer- and Reporter Gene-Based Analysis of FIH Activity in Cells. In: Gilkes, Daniele M. Oxomer-and Reporter Gene-Based Analysis of FIH Activity in Cells. Zürich, Switzerland: Springer, 249-264.

Selcuk, Kateryna; Leitner, Alexander; Braun, Lukas; Le Blanc, Fanny; Pacak, Paulina; Pot, Simon; Vogel, Viola (2024). Tissue Transglutaminase 2 has higher affinity for relaxed than for stretched fibronectin fibers. Matrix Biology, 125:113-132.

Gupta, Shibu; Guérin, Amandine; Herger, Aline; Hou, Xiaoyu; Schaufelberger, Myriam; Roulard, Romain; Diet, Anouck; Roffler, Stefan; Lefebvre, Valérie; Wicker, Thomas; Pelloux, Jérôme; Ringli, Christoph (2024). Growth-inhibiting effects of the unconventional plant APYRASE 7 of Arabidopsis thaliana influences the LRX/RALF/FER growth regulatory module. PLoS Genetics, 20(1):e1011087.

2023

Jung, Erik; Kraimps, Anastassia; Dittmann, Silvia; Griesser, Tizian; Costafrolaz, Jordan; Mattenberger, Yves; Jurt, Simon; Viollier, Patrick H; Sander, Peter; Sievers, Susanne; Gademann, Karl (2023). Phenolic Substitution in Fidaxomicin: A Semisynthetic Approach to Antibiotic Activity Across Species. Chembiochem, 24(24):e202300570.

Lam, Andy Km; Dutzler, Raimund (2023). Mechanistic basis of ligand efficacy in the calcium-activated chloride channel TMEM16A. EMBO Journal Online, 42(24):e115030.

Arnke, Kevin; Pfister, Pablo; Reid, Gregory; Vasella, Mauro; Ruhl, Tim; Seitz, Ann-Kathrin; Lindenblatt, Nicole; Cinelli, Paolo; Kim, Bong-Sung (2023). Impact of a High-Fat Diet at a Young Age on Wound Healing in Mice. International Journal of Molecular Sciences, 24(24):17299.

Wernlé, Kendra; Thiel, Cora S; Ullrich, Oliver (2023). Increased H3K9me3 and F-Actin Reorganization in the Rapid Adaptive Response to Hypergravity in Human T Lymphocytes. International Journal of Molecular Sciences, 24(24):17232.

Tröndle, Kevin; Rizzo, Ludovica; Pichler, Roman; Zimmermann, Stefan; Lienkamp, Soeren S (2023). Flow induces common and specific transcriptional changes in renal tubular epithelial cells involving the PI3K pathway. FASEB Journal, 38(1):e23329.

Ponce, Denis A; Scheyer, Torsten M; Cerda, Ignacio A; Desojo, Julia B (2023). Palaeobiological inferences of "rauisuchians" Fasolasuchus tenax (Los Colorados Fm., Argentina) and Prestosuchus chiniquensis (Santa Maria Super sequence, Brazil) from the Middle-Upper Triassic of South America based on microstructural analyses. Journal of Anatomy, 243(6):893-909.

Fan, Mingzhen; Kiefer, Patrick; Charki, Paul; Hedberg, Christian; Seibel, Jürgen; Vorholt, Julia A; Hilbi, Hubert (2023). The Legionella autoinducer LAI-1 is delivered by outer membrane vesicles to promote interbacterial and interkingdom signaling. Journal of Biological Chemistry, 299(12):105376.

Gourdon‐Grünewaldt, Lisa; Blacque, Olivier; Gasser, Gilles; Cariou, Kevin (2023). Towards Copper(I) Clusters for Photo‐Induced Oxidation of Biological Thiols in Living Cells**. Chembiochem, 24(23):e202300496.

Munro, Victoria; Kelly, Van; Messner, Christoph B; Kustatscher, Georg (2023). Cellular control of protein levels: A systems biology perspective. Proteomics:Epub ahead of print.

Santhosh Kumar, Harshitha; Moore, James; Steiner, Adrian C; Sotirakis, Emmanuel; Schärli, Benjamin; Isnard-Petit, Patricia; Thiam, Kader; Wolfer, David P; Böttger, Erik C (2023). Mistranslation-associated perturbations of proteostasis do not promote accumulation of amyloid beta and plaque deposition in aged mouse brain. Cellular and Molecular Life Sciences, 80(12):378.

Hilti, Dominique; Wehrli, Faina; Roditscheff, Anna; Risch, Martin; Risch, Lorenz; Egli, Adrian; Bodmer, Thomas; Wohlwend, Nadia (2023). SARS-CoV-2 Nucleocapsid Protein Mutations Found in Switzerland Disrupt N-Gene Amplification in Commonly Used Multiplex RT-PCR Assay. Pathogens, 12(12):1383.

Manser, Beatrice; Zbinden, Helen; Herren, Gerhard; Steger, Joel; Isaksson, Jonatan; Bräunlich, Stephanie; Wicker, Thomas; Keller, Beat (2023). Wheat zinc finger protein TaZF interacts with both the powdery mildew AvrPm2 protein and the corresponding wheat Pm2a immune receptor. Plant Communications:online.

van der Voorn, Stephanie M; van Drie, Esmée; Proost, Virginnio; Dimitrova, Kristina; Netherlands ACM/PLN Registry; Ernst, Robert F; James, Cynthia A; Tichnell, Crystal; Murray, Brittney; Calkins, Hugh; Saguner, Ardan M; Duru, Firat; Ellinor, Patrick T; Bezzina, Connie R; Jurgens, Sean J; van Tintelen, J Peter; van Veen, Toon A B (2023). Lack of Evidence for the Role of the p.(Ser96Ala) Polymorphism in Histidine-Rich Calcium Binding Protein as a Secondary Hit in Cardiomyopathies. International Journal of Molecular Sciences, 24(21):15931.

Vokinger, Kerstin N; Glaus, Camille E G; Kesselheim, Aaron S (2023). Approval and therapeutic value of gene therapies in the US and Europe. Gene Therapy, 30(10-11):756-760.

Baumann, Christian; Chiang, Wan‐Chin; Valsecchi, Renato; Jurt, Simon; Deluigi, Mattia; Schuster, Matthias; Rosengren, Karl Johan; Plückthun, Andreas; Zerbe, Oliver (2023). Side‐chain dynamics of the <scp>α<sub>1B</sub>‐</scp>adrenergic receptor determined by <scp>NMR</scp> via methyl relaxation. Protein Science, 32(11):e4801.

Buxboim, Amnon; Kronenberg-Tenga, Rafael; Salajkova, Sarka; Avidan, Nili; Shahak, Hen; Thurston, Alice; Medalia, Ohad (2023). Scaffold, mechanics and functions of nuclear lamins. FEBS letters, 597(22):2791-2805.

Winter, Yaroslav; Hilz, Max; Beuschlein, Felix; Tsukimura, Takahiro; Seifritz, Erich; Lenders, Malte; Brand, Eva; Hennermann, Julia B; Nowak, Albina (2023). Screening for health-related quality of life and its determinants in Fabry disease: A cross-sectional multicenter study. Molecular Genetics and Metabolism, 140(3):107692.

Cuénod, Aline; Agnetti, Jessica; Seth-Smith, Helena M B; Roloff, Tim; Wälchli, Denise; Shcherbakov, Dimitri; Akbergenov, Rashid; Tschudin-Sutter, Sarah; Bassetti, Stefano; Siegemund, Martin; Nickel, Christian H; Moran-Gilad, Jacob; Keys, Timothy G; Pflüger, Valentin; Thomson, Nicholas R; Egli, Adrian (2023). Bacterial genome-wide association study substantiates papGII of Escherichia coli as a major risk factor for urosepsis. Genome Medicine, 15(1):89.

David, Shannon C; Vadas, Oscar; Glas, Irina; Schaub, Aline; Luo, Beiping; D'angelo, Giovanni; Montoya, Jonathan Paz; Bluvshtein, Nir; Hugentobler, Walter; Klein, Liviana K; Motos, Ghislain; Pohl, Marie; Violaki, Kalliopi; Nenes, Athanasios; Krieger, Ulrich K; Stertz, Silke; Peter, Thomas; Kohn, Tamar (2023). Inactivation mechanisms of influenza A virus under pH conditions encountered in aerosol particles as revealed by whole-virus HDX-MS. mSphere, 8(5):e0022623.

Vasella, Mauro; Wolf, Stefan; Francis, Eamon C; Grieb, Gerrit; Pfister, Pablo; Reid, Gregory; Bernhagen, Jürgen; Lindenblatt, Nicole; Gousopoulos, Epameinondas; Kim, Bong-Sung (2023). Involvement of the Macrophage Migration Inhibitory Factor (MIF) in Lipedema. Metabolites, 13(10):1105.

Epp, Robert; Glück, Chaim; Binder, Nadine Felizitas; El Amki, Mohamad; Weber, Bruno; Wegener, Susanne; Jenny, Patrick; Schmid, Franca (2023). The role of leptomeningeal collaterals in redistributing blood flow during stroke. PLoS Computational Biology, 19(10):e1011496.

Kelbert, Lucien; Stevens, Marc J A; Horlbog, Jule Anna; Biggel, Michael; Stephan, Roger (2023). Completely assembled genome sequence of the florfenicol-resistant $Enterococcus faecalis$ strain 90_2023 isolated from a raw sausage imported from Italy to Switzerland. Microbiology Resource Announcements, 12(10):e0061023.

Hofer, Cyrill; Lingenhag, Seraina; Serra Moncadas, Lucas; Rain-Franco, Angel; Andrei, Adrian-Stefan (2023). Q20+ Nanopore sequencing data recover a high-quality Asticcacaulis sp. genome. Microbiology Resource Announcements, 12(10):online.

Wahlsten, Adam; Stracuzzi, Alberto; Lüchtefeld, Ines; Restivo, Gaetana; Lindenblatt, Nicole; Giampietro, Costanza; Ehret, Alexander E; Mazza, Edoardo (2023). Multiscale mechanical analysis of the elastic modulus of skin. Acta Biomaterialia, 170:155-168.

Laetsch, Dominik R; Bisschop, Gertjan; Martin, Simon H; Aeschbacher, Simon; Setter, Derek; Lohse, Konrad (2023). Demographically explicit scans for barriers to gene flow using gIMble. PLoS Genetics, 19(10):e1010999.

Hartmann, K Patricia; van Gogh, Merel; Freitag, Patrick C; Kast, Florian; Nagy-Davidescu, Gabriela; Borsig, Lubor; Plückthun, Andreas (2023). FAP-retargeted Ad5 enables in vivo gene delivery to stromal cells in the tumor microenvironment. Molecular Therapy, 31(10):2914-2928.

Berg, Lisa M; Gurr, Caroline; Leyhausen, Johanna; Seelemeyer, Hanna; Bletsch, Anke; Schaefer, Tim; Pretzsch, Charlotte M; Oakley, Bethany; Loth, Eva; Floris, Dorothea L; Buitelaar, Jan K; Beckmann, Christian F; Banaschewski, Tobias; Charman, Tony; Jones, Emily J H; Tillmann, Julian; Chatham, Chris H; Bourgeron, Thomas; EU-AIMS LEAP group; Murphy, Declan G; Ecker, Christine (2023). The neuroanatomical substrates of autism and ADHD and their link to putative genomic underpinnings. Molecular Autism, 14(1):36.

Wang, Youchao; Felder, Patrick S; Mesdom, Pierre; Blacque, Olivier; Mindt, Thomas L; Cariou, Kevin; Gasser, Gilles (2023). Towards Ruthenium(II)‐Rhenium(I) Binuclear Complexes as Photosensitizers for Photodynamic Therapy. Chembiochem, 24(19):e202300467.

Perren, Leonie; Busch, Moana; Schuler, Cordelia; Ruiz, Pedro A; Foti, Federica; Weibel, Nathalie; de Vallière, Cheryl; Morsy, Yasser; Seuwen, Klaus; Hausmann, Martin; Rogler, Gerhard (2023). OGR1 (GPR68) and TDAG8 (GPR65) Have Antagonistic Effects in Models of Colonic Inflammation. International Journal of Molecular Sciences, 24(19):14855.

Zuñiga, Nikole R; Dumoulin, Alexandre; Vaccaro, Giuseppe; Stoeckli, Esther T (2023). Cables1 links Slit/Robo and Wnt/Frizzled signaling in commissural axon guidance. Development, 150(19):dev201671.

Wan, Bin; Hong, Seok-Jun; Bethlehem, Richard A I; Floris, Dorothea L; Bernhardt, Boris C; Valk, Sofie L (2023). Diverging asymmetry of intrinsic functional organization in autism. Molecular Psychiatry, 28(10):4331-4341.

Bruin, Willem B; Abe, Yoshinari; Alonso, Pino; Anticevic, Alan; Backhausen, Lea L; Balachander, Srinivas; Bargallo, Nuria; Batistuzzo, Marcelo C; Benedetti, Francesco; Bertolin Triquell, Sara; Brem, Silvia; Calesella, Federico; Couto, Beatriz; Denys, Damiaan A J P; Echevarria, Marco A N; Eng, Goi Khia; Ferreira, Sónia; Feusner, Jamie D; Grazioplene, Rachael G; Gruner, Patricia; Guo, Joyce Y; Hagen, Kristen; Hansen, Bjarne; Hirano, Yoshiyuki; Hoexter, Marcelo Q; Jahanshad, Neda; Jaspers-Fayer, Fern; Kasprzak, Selina; Walitza, Susanne; et al (2023). The functional connectome in obsessive-compulsive disorder: resting-state mega-analysis and machine learning classification for the ENIGMA-OCD consortium. Molecular Psychiatry, 28(10):4307-4319.

Yang, Tianjin; Buholzer, Karin J; Sottini, Andrea; Cao, Xiaobao; deMello, Andrew; Nettels, Daniel; Schuler, Benjamin (2023). Rapid droplet-based mixing for single-molecule spectroscopy. Nature Methods, 20(10):1479-1482.

Blekemolen, Mila C; Liu, Zunyong; Stegman, Martin; Zipfel, Cyril; Shan, Libo; Takken, Frank L W (2023). The PTI-suppressing Avr2 effector from Fusarium oxysporum suppresses mono-ubiquitination and plasma membrane dissociation of BIK1. Molecular Plant Pathology, 24(10):1273-1286.

Fischer, Jacqueline; Erkner, Estelle; Fitzel, Rahel; Radszuweit, Pia; Keppeler, Hildegard; Korkmaz, Fulya; Roti, Giovanni; Lengerke, Claudia; Schneidawind, Dominik; Schneidawind, Corina (2023). Uncovering NOTCH1 as a Promising Target in the Treatment of MLL-Rearranged Leukemia. International Journal of Molecular Sciences, 24(19):14466.

Botter, Sander M; Kessler, Thomas M (2023). Neuro-Urology and Biobanking: An Integrated Approach for Advancing Research and Improving Patient Care. International Journal of Molecular Sciences, 24(18):14281.

Eichenauer, Heike; Ehlert, Ulrike (2023). The association between prenatal famine, DNA methylation and mental disorders: a systematic review and meta-analysis. Clinical Epigenetics, 15(1):152.

Vasella, Mauro; Arnke, Kevin; Dranseikiene, Dalia; Guzzi, Elia; Melega, Francesca; Reid, Gregory; Klein, Holger Jan; Schweizer, Riccardo; Tibbitt, Mark W; Kim, Bong-Sung (2023). Methacrylated Gelatin as a Scaffold for Mechanically Isolated Stromal Vascular Fraction for Cutaneous Wound Repair. International Journal of Molecular Sciences, 24(18):13944.

Bonini, Chiara; Chapuis, Aude G; Hudecek, Michael; Guedan, Sonia; Magnani, Chiara; Qasim, Waseem (2023). Genome Editing in Engineered T Cells for Cancer Immunotherapy. Human Gene Therapy, 34(17-18):853-869.

Berková, Linda; Fazilaty, Hassan; Yang, Qiutan; Kubovčiak, Jan; Stastna, Monika; Hrckulak, Dusan; Vojtechova, Martina; Dalessi, Tosca; Brügger, Michael David; Hausmann, George; Liberali, Prisca; Korinek, Vladimir; Basler, Konrad; Valenta, Tomas (2023). Terminal differentiation of villus tip enterocytes is governed by distinct Tgfβ superfamily members. EMBO Reports, 24(9):e56454.

Pérez-Berlanga, Manuela; Wiersma, Vera I; Zbinden, Aurélie; De Vos, Laura; Wagner, Ulrich; Foglieni, Chiara; Mallona, Izaskun; Betz, Katharina M; Cléry, Antoine; Weber, Julien; Guo, Zhongning; Rigort, Ruben; de Rossi, Pierre; Manglunia, Ruchi; Tantardini, Elena; Sahadevan, Sonu; Stach, Oliver; Hruska-Plochan, Marian; Allain, Frederic H-T; Paganetti, Paolo; Polymenidou, Magdalini (2023). Loss of TDP-43 oligomerization or RNA binding elicits distinct aggregation patterns. EMBO Journal Online, 42(17):e111719.

Stier, Anna; Gilberto, Samuel; Mohamed, Weaam I; Royall, Lars N; Helenius, Jonne; Mikicic, Ivan; Sajic, Tatjana; Beli, Petra; Müller, Daniel J; Jessberger, Sebastian; Peter, Matthias (2023). The CUL4B‐based E3 ubiquitin ligase regulates mitosis and brain development by recruiting phospho‐specific DCAFs. EMBO Journal Online, 42(17):e112847.

Lone, Museer A; Zeng, Sen; Bourquin, Florence; Wang, Mengli; Huang, Shunxiang; Lin, Zhiqiang; Tang, Beisha; Zhang, Ruxu; Hornemann, Thorsten (2023). SPTLC1 p.Leu38Arg, a novel mutation associated with childhood ALS. Biochimica and Biophysica Acta. Molecular and Cell Biology of Lipids, 1868(9):159359.

Kagiampaki, Zacharoula; Rohner, Valentin; Kiss, Cedric; Curreli, Sebastiano; Dieter, Alexander; Wilhelm, Maria; Harada, Masaya; Duss, Sian N; Dernic, Jan; Bhat, Musadiq A; Zhou, Xuehan; Ravotto, Luca; Ziebarth, Tim; Wasielewski, Laura Moreno; Sönmez, Latife; Benke, Dietmar; Weber, Bruno; Bohacek, Johannes; Reiner, Andreas; Wiegert, J Simon; Fellin, Tommaso; Patriarchi, Tommaso (2023). Sensitive multicolor indicators for monitoring norepinephrine in vivo. Nature Methods, 20(9):1426-1436.

Hosogane, Tsuyoshi; Casanova, Ruben; Bodenmiller, Bernd (2023). DNA-barcoded signal amplification for imaging mass cytometry enables sensitive and highly multiplexed tissue imaging. Nature Methods, 20(9):1304-1309.

Silva de Melo, Bruno Marcel; Veras, Flávio Protásio; Zwicky, Pascale; Lima, Diógenes; Ingelfinger, Florian; Martins, Timna Varela; da Silva Prado, Douglas; Schärli, Stefanie; Publio, Gabriel; Hiroki, Carlos Hiroji; Melo, Paulo Henrique; Saraiva, André; Norbiato, Thainá; Lima, Leonardo; Ryffel, Bernhard; Vogl, Thomas; Roth, Johannes; Waisman, Ari; Nakaya, Helder I; da Silva Souza, Cacilda; Cunha, Fernando Q; Cunha, Thiago M; Becher, Burkhard; Alves-Filho, José C (2023). S100A9 Drives the Chronification of Psoriasiform Inflammation by Inducing IL-23/Type 3 Immunity. Journal of Investigative Dermatology, 143(9):1678-1688.e8.

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Bedi, Rajiv Kumar; Huang, Danzhi; Li, Yaozong; Caflisch, Amedeo (2023). Structure-Based Design of Inhibitors of the m$^{6}$A-RNA Writer Enzyme METTL3. ACS Bio & Med Chem Au, 3(4):359-370.

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Fazilaty, Hassan (2023). Restoration of embryonic gene expression patterns in tissue regeneration and disease. Nature Reviews. Molecular Cell Biology, 24(6):375-376.

Neupane, Sandesh; De Cecco, Elena; Aguzzi, Adriano (2023). The Hidden Cell-to-Cell Trail of α-Synuclein Aggregates. Journal of Molecular Biology, 435(12):167930.

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Roux, Fabrice; Frachon, Léa; Bartoli, Claudia (2023). The Genetic Architecture of Adaptation to Leaf and Root Bacterial Microbiota in Arabidopsis thaliana. Molecular Biology and Evolution, 40(5):msad093.

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Fahrner, Alexandra; Luca, Edlira; Krützfeldt, Jan (2023). microRNA-501 controls myogenin$^{+}$/CD74$^{+}$ myogenic progenitor cells during muscle regeneration. Molecular Metabolism, 71:101704.

Stawarczyk, Bogna; Roos, Malgorzata (2023). Establishing effective cross-disciplinary collaboration: Combining simple rules for reproducible computational research, a good data management plan, and good research practice. PLoS Computational Biology, 19(4):e1011052.

von Atzigen, Julia; Burger, Anna; Grünherz, Lisanne; Barbon, Carlotta; Felmerer, Gunther; Giovanoli, Pietro; Lindenblatt, Nicole; Wolf, Stefan; Gousopoulos, Epameinondas (2023). A Comparative Analysis to Dissect the Histological and Molecular Differences among Lipedema, Lipohypertrophy and Secondary Lymphedema. International Journal of Molecular Sciences, 24(8):7591.

Janker, Stefanie; Doswald, Simon; Schimmer, Roman R; Schanz, Urs; Stark, Wendelin J; Schläpfer, Martin; Beck-Schimmer, Beatrice (2023). Targeted Large-Volume Lymphocyte Removal Using Magnetic Nanoparticles in Blood Samples of Patients with Chronic Lymphocytic Leukemia: A Proof-of-Concept Study. International Journal of Molecular Sciences, 24(8):7523.

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Rossi, Valentina A; Gruebler, Martin; Monzo, Luca; Galluzzo, Alessandro; Beltrami, Matteo (2023). The Different Pathways of Epicardial Adipose Tissue across the Heart Failure Phenotypes: From Pathophysiology to Therapeutic Target. International Journal of Molecular Sciences, 24(7):6838.

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Lecoq, Jérôme A; Boehringer, Roman; Grewe, Benjamin F (2023). Deep brain imaging on the move. Nature Methods, 20(4):495-496.

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Chen, Yanjiang; Herzog, Marius; Pliego-Mendieta, Alicia; Bühler, Marco Matteo; Harnisch, Kim Jannis; Haberecker, Martina; Arnold, Fabian; Planas-Paz, Lara; Pauli, Chantal (2023). Addressing Modern Diagnostic Pathology for Patient-Derived Soft Tissue Sarcosphere Models in the Era of Functional Precision Oncology. Laboratory investigation, 103(4):100039.

Zwyer, Michaela; Rutaihwa, Liliana K; Windels, Etthel; Hella, Jerry; Menardo, Fabrizio; Sasamalo, Mohamed; Sommer, Gregor; Schmülling, Lena; Borrell, Sonia; Reinhard, Miriam; Dötsch, Anna; Hiza, Hellen; Stritt, Christoph; Sikalengo, George; Fenner, Lukas; De Jong, Bouke C; Kato-Maeda, Midori; Jugheli, Levan; Ernst, Joel D; Niemann, Stefan; Jeljeli, Leila; Ballif, Marie; Egger, Matthias; Rakotosamimanana, Niaina; Yeboah-Manu, Dorothy; Asare, Prince; Malla, Bijaya; Dou, Horng Yunn; Zetola, Nicolas; Wilkinson, Robert J; et al (2023). Back-to-Africa introductions of Mycobacterium tuberculosis as the main cause of tuberculosis in Dar es Salaam, Tanzania. PLoS Pathogens, 19(4):e1010893.

Messner, Christoph B; Demichev, Vadim; Wang, Ziyue; Hartl, Johannes; Kustatscher, Georg; Mülleder, Michael; Ralser, Markus (2023). Mass spectrometry‐based high‐throughput proteomics and its role in biomedical studies and systems biology. Proteomics, 23(7-8):e2200013.

Weber, Ronja; Streckenbach, Bettina; Welti, Lara; Inci, Demet; Kohler, Malcolm; Perkins, Nathan; Zenobi, Renato; Micic, Srdjan; Moeller, Alexander (2023). Online breath analysis with SESI/HRMS for metabolic signatures in children with allergic asthma. Frontiers in Molecular Biosciences, 10:1154536.

Mongelli, A; Panunzi, S; Nesta, M; Gottardi Zamperla, M; Atlante, S; Barbi, V; Mongiardini, V; Ferraro, F; De Martino, S; Cis, L; Re, A; Maltese, S; Bachetti, T; La Rovere, M T; Martelli, F; Pesce, M; Nanni, S; Massetti, M; Pontecorvi, A; Farsetti, A; Gaetano, C (2023). Distinguishable DNA methylation defines a cardiac-specific epigenetic clock. Clinical Epigenetics, 15(1):53.

Mastroiacovo, Daniela; Mengozzi, Alessandro; Dentali, Francesco; Pomero, Fulvio; Virdis, Agostino; Camerota, Antonio; Muselli, Mario; Necozione, Stefano; Bocale, Raffaella; Ferri, Claudio; Desideri, Giovambattista (2023). Enhanced Carotid Plaque Echolucency Is Associated with Reduced Cognitive Performance in Elderly Patients with Atherosclerotic Disease Independently on Metabolic Profile. Metabolites, 13(4):478.

Guerrero, Julien; Maevskaia, Ekaterina; Ghayor, Chafik; Bhattacharya, Indranil; Weber, Franz E (2023). Influence of Scaffold Microarchitecture on Angiogenesis and Regulation of Cell Differentiation during the Early Phase of Bone Healing: A Transcriptomics and Histological Analysis. International Journal of Molecular Sciences, 24(6):6000.

Biggel, Michael; Barmettler, Karen; Treier, Andrea; Muchaamba, Francis; Stephan, Roger (2023). Draft Genome Sequences of Two Escherichia albertii Isolates Collected from Healthy Pets in Switzerland. Microbiology Resource Announcements, 12(3):e0135622.

Stegmüller, Stefanie; Fraefel, Cornel; Kubacki, Jakub (2023). Genome Sequence of Alongshan Virus from Ixodes ricinus Ticks Collected in Switzerland. Microbiology Resource Announcements, 12(3):e0128722.

Martin, Marcy; Gähwiler, Eric K N; Generali, Melanie; Hoerstrup, Simon P; Emmert, Maximilian Y (2023). Advances in 3D Organoid Models for Stem Cell-Based Cardiac Regeneration. International Journal of Molecular Sciences, 24(6):5188.

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Stoy, Henriette; Zwicky, Katharina; Kuster, Danina; Lang, Kevin S; Krietsch, Jana; Crossley, Magdalena P; Schmid, Jonas A; Cimprich, Karlene A; Merrikh, Houra; Lopes, Massimo (2023). Direct visualization of transcription-replication conflicts reveals post-replicative DNA:RNA hybrids. Nature Structural & Molecular Biology, 30(3):348-359.

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Long, Fen; Bhatti, Memoona R; Kellenberger, Alexandra; Sun, Wenfei; Modica, Salvatore; Höring, Marcus; Liebisch, Gerhard; Krieger, Jean-Philippe; Wolfrum, Christian; Challa, Tenagne D (2023). A low-carbohydrate diet induces hepatic insulin resistance and metabolic associated fatty liver disease in mice. Molecular Metabolism, 69:101675.

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Bost, Pierre; Schulz, Daniel; Engler, Stefanie; Wasserfall, Clive; Bodenmiller, Bernd (2023). Optimizing multiplexed imaging experimental design through tissue spatial segregation estimation. Nature Methods, 20(3):418-423.

Schellhorn, Sebastian; Brücher, Dominik; Wolff, Natascha A; Schröer, Katrin; Sallard, Erwan; Mese, Kemal; Zhang, Wenli; Ehrke-Schulz, Eric; Thévenod, Frank; Plückthun, Andreas; Ehrhardt, Anja (2023). Targeting Oncolytic Adenoviruses to Cancer Cells Using a Designed Ankyrin Repeat Protein Lipocalin-2 Fusion Protein. Human Gene Therapy, 34(5-6):203-216.

Wu, Licun; Yoshihara, Kosuke; Yun, Hana; Karim, Saraf; Shokri, Nastaran; Zaeimi, Fatemeh; Man, H S Jeffrey; Zia, Amin; Felley-Bosco, Emanuela; de Perrot, Marc (2023). Prognostic Value of EMT Gene Signature in Malignant Mesothelioma. International Journal of Molecular Sciences, 24(5):4264.

Bencsik, Norbert; Oueslati Morales, Carlos Omar; Hausser, Angelika; Schlett, Katalin (2023). Endocytosis of AMPA receptors: Role in neurological conditions. In: Peñano, John Michael. Progress in Molecular Biology and Translational Science. United States: Elsevier, 59-97.

Planta, Dafni; Gerwinn, Tim; Salemi, Souzan; Horst, Maya (2023). Neurogenic Lower Urinary Tract Dysfunction in Spinal Dysraphism: Morphological and Molecular Evidence in Children. International Journal of Molecular Sciences, 24(4):3692.

Haider, Ahmed; Elghazawy, Nehal H; Dawoud, Alyaa; Gebhard, Catherine; Wichmann, Thomas; Sippl, Wolfgang; Hoener, Marius; Arenas, Ernest; Liang, Steven H (2023). Translational molecular imaging and drug development in Parkinson's disease. Molecular Neurodegeneration, 18(1):11.

Kothegala, Lakshmi; Miranda, Caroline; Singh, Meetu; Krieger, Jean-Philippe; Gandasi, Nikhil R (2023). Somatostatin Containing δ-Cell Number Is Reduced in Type-2 Diabetes. International Journal of Molecular Sciences, 24(4):3449.

Mengozzi, Alessandro; Pugliese, Nicola Riccardo; Desideri, Giovambattista; Masi, Stefano; Angeli, Fabio; Barbagallo, Carlo Maria; Bombelli, Michele; Cappelli, Federica; Casiglia, Edoardo; Cianci, Rosario; Ciccarelli, Michele; Cicero, Arrigo F G; Cirillo, Massimo; Cirillo, Pietro; Dell'Oro, Raffaella; D'Elia, Lanfranco; Ferri, Claudio; Galletti, Ferruccio; Gesualdo, Loreto; Giannattasio, Cristina; Grassi, Guido; Iaccarino, Guido; Lippa, Luciano; Mallamaci, Francesca; Maloberti, Alessandro; Masulli, Maria; Mazza, Alberto; Muiesan, Maria Lorenza; Nazzaro, Pietro; Palatini, Paolo; et al (2023). Serum Uric Acid Predicts All-Cause and Cardiovascular Mortality Independently of Hypertriglyceridemia in Cardiometabolic Patients without Established CV Disease: A Sub-Analysis of the URic acid Right for heArt Health (URRAH) Study. Metabolites, 13(2):244.

Stefanini, Camilla; Csilléry, Katalin; Ulaszewski, Bartosz; Burczyk, Jarosław; Schaepman, Michael E; Schuman, Meredith Christine (2023). A novel synthesis of two decades of microsatellite studies on European beech reveals decreasing genetic diversity from glacial refugia. Tree Genetics & Genomes, 19(1):3.

Slot, Emma M H; Bergmann, Wilhelmina; Kinaci, Ahmet; de Boer, Bart; Moayeri, Nizar; Redegeld, Saskia; van Thoor, Sander; van Doormaal, Tristan P C (2023). Histological and magnetic resonance imaging assessment of Liqoseal in a spinal in vivo pig model. Animal Models and Experimental Medicine, 6(1):74-80.

Ghielmetti, Giovanni; Seth-Smith, Helena M B; Roloff, Tim; Cernela, Nicole; Biggel, Michael; Stephan, Roger; Egli, Adrian (2023). Whole-genome-based characterization of Campylobacter jejuni from human patients with gastroenteritis collected over an 18 year period reveals increasing prevalence of antimicrobial resistance. Microbial Genomics, 9(2):mgen000941.

Xiang, Yusen; Zhai, Guanglei; Li, Yaozong; Wang, Mengge; Chen, Xixiang; Wang, Ruyu; Xie, Hang; Zhang, Weidong; Ge, Guangbo; Zhang, Qian; Xu, Yechun; Caflisch, Amedeo; Xu, Jianrong; Chen, Hongzhuan; Chen, Lili (2023). Ginkgolic acids inhibit SARS-CoV-2 and its variants by blocking the spike protein/ACE2 interplay. International journal of biological macromolecules, 226:780-792.

Vahlensieck, Christian; Thiel, Cora Sandra; Mosimann, Meret; Bradley, Timothy; Caldana, Fabienne; Polzer, Jennifer; Lauber, Beatrice Astrid; Ullrich, Oliver (2023). Transcriptional Response in Human Jurkat T Lymphocytes to a near Physiological Hypergravity Environment and to One Common in Routine Cell Culture Protocols. International Journal of Molecular Sciences, 24(2):1351.

Huemer, Markus; Mairpady Shambat, Srikanth; Hertegonne, Sanne; Bergada-Pijuan, Judith; Chang, Chun-Chi; Pereira, Sandro; Gómez-Mejia, Alejandro; Van Gestel, Lies; Bär, Julian; Vulin, Clément; Pfammatter, Sibylle; Stinear, Timothy P; Monk, Ian R; Dworkin, Jonathan; Zinkernagel, Annelies S (2023). Serine-threonine phosphoregulation by PknB and Stp contributes to quiescence and antibiotic tolerance in Staphylococcus aureus. Science Signaling, 16(766):eabj8194.

Buch, Thorsten; Jerchow, Boris; Zevnik, Branko (2023). Practical Application of the 3Rs in Rodent Transgenesis. Methods in Molecular Biology, 2631:33-51.

Petschenka, Georg; Züst, Tobias; Hastings, Amy P; Agrawal, Anurag A; Jander, Georg (2023). Quantification of plant cardenolides by HPLC, measurement of Na+/K+-ATPase inhibition activity, and characterization of target enzymes. In: Jez, Joseph. Biochemical Pathways and Environmental Responses in Plants: Part B. Cambridge MA: Elsevier, 275-302.

Wang, Chunyang; Wojtynek, Matthias; Medalia, Ohad (2023). Structural investigation of eukaryotic cells: From the periphery to the interior by cryo-electron tomography. Advances in Biological Regulation, 87:100923.

Rutz, Sonja; Deneka, Dawid; Dittmann, Antje; Sawicka, Marta; Dutzler, Raimund (2023). Structure of a volume-regulated heteromeric LRRC8A/C channel. Nature Structural & Molecular Biology, 30(1):52-61.

Liu, Guizhen; Riemer, Esther; Schneider, Robin; Cabuzu, Daniela; Bonny, Olivier; Wagner, Carsten A; Qiu, Danye; Saiardi, Adolfo; Strauss, Annett; Lahaye, Thomas; Schaaf, Gabriel; Knoll, Thomas; Jessen, Jan P; Jessen, Henning J (2023). The phytase RipBL1 enables the assignment of a specific inositol phosphate isomer as a structural component of human kidney stones. RSC Chemical Biology, 4(4):300-309.

Fiaschetti, G; Castelletti, D; Zoller, S; Schramm, A; Schroeder, C; Nagaishi, M; Stearns, D; Mittelbronn, M; Eggert, A; Westermann, F; Ohgaki, H; Shalaby, T; Pruschy, M; Arcaro, A; Grotzer, M A (2023). Correction: Bone morphogenetic protein-7 is a MYC target with prosurvival functions in childhood medulloblastoma. Oncogene, 42(2):168.

Gaul, Daniel S; Calatayud, Natacha; Pahla, Jürgen; Bonetti, Nicole R; Wang, Yu-Jen; Weber, Julien; Ambrosini, Samuele; Liberale, Luca; Costantino, Sarah; Mohammed, Shafeeq A; Kraler, Simon; Van Tits, Lambertus J; Pasterk, Lisa; Vdovenko, Daria; Akhmedov, Alexander; Ruschitzka, Frank; Paneni, Francesco; Lüscher, Thomas F; Camici, Giovanni G; Matter, Christian M (2023). Endothelial SIRT6 deficiency promotes arterial thrombosis in mice. Journal of Molecular and Cellular Cardiology, 174:56-62.

Weiler, Philipp; Van den Berge, Koen; Street, Kelly; Tiberi, Simone (2023). A Guide to Trajectory Inference and RNA Velocity. Methods in Molecular Biology, 2584:269-292.

Schweizer, Tiziano A; Hertegonne, Sanne; Vulin, Clément; Zinkernagel, Annelies S; Mairpady Shambat, Srikanth (2023). Antibacterial Neutrophil Effector Response: Ex Vivo Quantification of Regulated Cell Death Associated with Extracellular Trap Release. In: Nordenfelt, Pontus; Collin, Mattias. Bacterial Pathogenesis : Methods and Protocols. New York: Springer, 235-250.

Karakulak, Tülay; Szklarczyk, Damian; Saylan, Cemil Can; Moch, Holger; von Mering, Christian; Kahraman, Abdullah (2023). CanIsoNet: a database to study the functional impact of isoform switching events in diseases. Bioinformatics advances, 3(1):vbad050.

Gesemann, Matthias; Neuhauss, Stephan C F (2023). Evolution of visual guanylyl cyclases and their activating proteins with respect to clade and species-specific visual system adaptation. Frontiers in Molecular Neuroscience, 16:1131093.

Welin, Amanda; Hüsler, Dario; Hilbi, Hubert (2023). Imaging Flow Cytometry of Legionella-Containing Vacuoles in Intact and Homogenized Wild-Type and Mutant Dictyostelium. In: Barteneva, Natasha; Vorobjev, Ivan. Spectral and Imaging Cytometry : Methods and Protocols. New York: Springer, 63-85.

2022

Amweg, Austeja; Tusup, Marina; Cheng, Phil; Picardi, Ernesto; Dummer, Reinhard; Levesque, Mitchell P; French, Lars E; Guenova, Emmanuella; Läuchli, Severin; Kündig, Thomas; Mellett, Mark; Pascolo, Steve (2022). The A to I editing landscape in melanoma and its relation to clinical outcome. RNA biology, 19(1):996-1006.

Strubel, Alexander; Münick, Philipp; Chaikuad, Apirat; Dreier, Birgit; Schaefer, Jonas; Gebel, Jakob; Osterburg, Christian; Tuppi, Marcel; Schäfer, Birgit; Knapp, Stefan; Plückthun, Andreas; Dötsch, Volker (2022). Designed Ankyrin Repeat Proteins as a tool box for analyzing p63. Cell Death and Differentiation, 29(12):2445-2458.

Vahlensieck, Christian; Thiel, Cora Sandra; Christoffel, Swantje; Herbst, Sabrina; Polzer, Jennifer; Lauber, Beatrice Astrid; Wolter, Saskia; Layer, Liliana Elisabeth; Hinkelbein, Jochen; Tauber, Svantje; Ullrich, Oliver (2022). Rapid Downregulation of H3K4me3 Binding to Immunoregulatory Genes in Altered Gravity in Primary Human M1 Macrophages. International Journal of Molecular Sciences, 24:603.

Looden, Tristan; Floris, Dorothea L; Llera, Alberto; Chauvin, Roselyne J; Charman, Tony; Banaschewski, Tobias; Murphy, Declan; Marquand, Andre F; Buitelaar, Jan K; Beckmann, Christian F; Brandeis, Daniel; et al (2022). Patterns of connectome variability in autism across five functional activation tasks: findings from the LEAP project. Molecular Autism, 13:53.

Hendrikse, Erica R; Rees, Tayla A; Tasma, Zoe; Garelja, Michael L; Siow, Andrew; Harris, Paul W R; Pawlak, John B; Caron, Kathleen M; Blakeney, Elizabeth S; Russo, Andrew F; Sowers, Levi P; Lutz, Thomas A; Le Foll, Christelle; Walker, Christopher S; Hay, Debbie L (2022). Characterization of Antibodies against Receptor Activity-Modifying Protein 1 (RAMP1): A Cautionary Tale. International Journal of Molecular Sciences, 23(24):16035.

Agnihotri, Nishtha; Mohajeri, M Hasan (2022). Involvement of Intestinal Microbiota in Adult Neurogenesis and the Expression of Brain-Derived Neurotrophic Factor. International Journal of Molecular Sciences, 23(24):15934.

Neuhauss, Stephan C F (2022). Editorial: Insights in methods and model organisms: 2021. Frontiers in Molecular Neuroscience, 15:1104424.

Chighine, Alberto; Corona, Andrea; Catani, Gualtiero; Conte, Celeste; Demontis, Roberto; Nioi, Matteo (2022). A Fatal Case of Metastatic Pulmonary Calcification during the Puerperium. International Journal of Molecular Sciences, 23(23):15131.

Lüscher, Bernhard; Ahel, Ivan; Altmeyer, Matthias; Ashworth, Alan; Bai, Peter; Chang, Paul; et al; Hottiger, Michael O (2022). ADP‐ribosyltransferases, an update on function and nomenclature. FEBS Journal, 289(23):7399-7410.

Avar, Merve; Heinzer, Daniel; Thackray, Alana M; Liu, Yingjun; Hruska‐Plochan, Marian; Sellitto, Stefano; Schaper, Elke; Pease, Daniel P; Yin, Jiang‐An; Lakkaraju, Asvin KK; Emmenegger, Marc; Losa, Marco; Chincisan, Andra; Hornemann, Simone; Polymenidou, Magdalini; Bujdoso, Raymond; Aguzzi, Adriano (2022). An arrayed genome‐wide perturbation screen identifies the ribonucleoprotein Hnrnpk as rate‐limiting for prion propagation. EMBO Journal Online, 41(23):e112338.

Sauer, Agnes; Seeliger, Benjamin; Jandl, Katharina; Erfinanda, Lasti; Wilhelm, Jochen; Alexopoulos, Ioannis; Baal, Nelli; Birnhuber, Anna; David, Sascha; Welte, Tobias; Barreto, Guillermo; Gaertner, Ulrich; Kwapiszewska, Grazyna; Seeger, Werner; Kuebler, Wolfgang M; Schaefer, Liliana; Wygrecka, Malgorzata (2022). Circulating hyaluronic acid signature in CAP and ARDS – the role of pneumolysin in hyaluronic acid shedding. Matrix Biology, 114:67-83.

Horvath, Gabriella A; Blau, Nenad; Ferreira, Carlos R (2022). Clinical and biochemical footprints of inherited metabolic disease. V. Cerebral palsy phenotypes. Molecular Genetics and Metabolism, 137(4):445-448.

Beebe, Erin; Motamed, Zahra; Opitz, Lennart; Cheng, Phil F; Levesque, Mitchell P; Markkanen, Enni; Feldmeyer, Laurence (2022). Defining the Molecular Landscape of Cancer-Associated Stroma in Cutaneous Squamous Cell Carcinoma. Journal of Investigative Dermatology, 142(12):3304-3312.e5.

Jönsson, Åsa Lina M; Hernando, Nati; Knöpfel, Thomas; Mogensen, Susie; Bendstrup, Elisabeth; Hilberg, Ole; Christensen, Jane Hvarregaard; Simonsen, Ulf; Wagner, Carsten A (2022). Impaired phosphate transport in SLC34A2 variants in patients with pulmonary alveolar microlithiasis. Human Genomics, 16(1):13.

Dogga, Sunil Kumar; Lunghi, Matteo; Maco, Bohumil; Li, Jiagui; Claudi, Beatrice; Marq, Jean‐Baptiste; Chicherova, Natalia; Kockmann, Tobias; Bumann, Dirk; Hehl, Adrian B; Soldati‐Favre, Dominique; Hammoudi, Pierre‐Mehdi (2022). Importance of aspartyl protease 5 in the establishment of the intracellular niche during acute and chronic infection of Toxoplasma gondii. Molecular Microbiology, 118(6):601-622.

Deplazes, Sereina; Schlegel, Andrea; Song, Zhuolun; Allegri, Gabriella; Rimann, Nicole; Scherer, Tanja; Willimann, Melanie; Opitz, Lennart; Cunningham, Sharon C; Alexander, Ian E; Kipar, Anja; Häberle, Johannes; Thöny, Beat; Grisch-Chan, Hiu Man (2022). Intrabiliary infusion of naked DNA vectors targets periportal hepatocytes in mice. Molecular Therapy - Methods & Clinical Development, 27:352-367.

Himmelreich, Nastassja; Montioli, Riccardo; Garbade, Sven F; Kopesky, Jeffrey; Elsea, Sarah H; Carducci, Carla; Voltattorni, Carla B; Blau, Nenad (2022). Spectrum of DDC variants causing aromatic l-amino acid decarboxylase (AADC) deficiency and pathogenicity interpretation using ACMG-AMP/ACGS recommendations. Molecular Genetics and Metabolism, 137(4):359-381.

Yu, Gang; Derkacheva, Maria; Rufian, Jose S; Brillada, Carla; Kowarschik, Kathrin; Jiang, Shushu; Derbyshire, Paul; Ma, Miaomiao; DeFalco, Thomas A; Morcillo, Rafael J L; Stransfeld, Lena; Wei, Yali; Zhou, Jian‐Min; Menke, Frank L H; Trujillo, Marco; Zipfel, Cyril; Macho, Alberto P (2022). The Arabidopsis E3 ubiquitin ligase PUB4 regulates BIK1 and is targeted by a bacterial type-III effector. EMBO Journal Online, 41(23):e107257.

Coenye, Tom; Spittaels, Karl-Jan; Achermann, Yvonne (2022). The role of biofilm formation in the pathogenesis and antimicrobial susceptibility of Cutibacterium acnes. Biofilm, 4:100063.

Chiapperino, Luca; Paneni, Francesco (2022). Why epigenetics is (not) a biosocial science and why that matters. Clinical Epigenetics, 14(1):144.

Bazo, Andrea; Lantero, Aquilino; Mauleón, Itsaso; Neri, Leire; Poms, Martin; Häberle, Johannes; Ricobaraza, Ana; Bénichou, Bernard; Combal, Jean-Philippe; Gonzalez-Aseguinolaza, Gloria; Aldabe, Rafael (2022). Gene Therapy in Combination with Nitrogen Scavenger Pretreatment Corrects Biochemical and Behavioral Abnormalities of Infant Citrullinemia Type 1 Mice. International Journal of Molecular Sciences, 23(23):14940.

Schmidt, Felix; Nowak, Nora; Baumgartner, Patrick; Gaisl, Thomas; Malesevic, Stefan; Streckenbach, Bettina; Sievi, Noriane A; Schwarz, Esther I; Zenobi, Renato; Brown, Steven A; Kohler, Malcolm (2022). Severe Obstructive Sleep Apnea Disrupts Vigilance-State-Dependent Metabolism. International Journal of Molecular Sciences, 23(22):14052.

Rausch, Magdalena; Samodelov, Sophia L; Visentin, Michele; Kullak-Ublick, Gerd A (2022). The Farnesoid X Receptor as a Master Regulator of Hepatotoxicity. International Journal of Molecular Sciences, 23(22):13967.

Wolf, Stefan; von Atzigen, Julia; Kaiser, Bettina; Grünherz, Lisanne; Kim, Bong-Sung; Giovanoli, Pietro; Lindenblatt, Nicole; Gousopoulos, Epameinondas (2022). Is Lymphedema a Systemic Disease? A Paired Molecular and Histological Analysis of the Affected and Unaffected Tissue in Lymphedema Patients. Biomolecules, 12(11):1667.

Jacobs, Kurt; Doerdelmann, Cyril; Krietsch, Jana; González-Acosta, Daniel; Mathis, Nicolas; Kushinsky, Saul; Guarino, Estrella; Gómez-Escolar, Carmen; Martinez, Dolores; Schmid, Jonas A; Leary, Peter J; Freire, Raimundo; Ramiro, Almudena R; Eischen, Christine M; Mendez, Juan; Lopes, Massimo (2022). Stress-triggered hematopoietic stem cell proliferation relies on PrimPol-mediated repriming. Molecular Cell, 82(21):4176-4188.e8.

Armignacco, Roberta; Reel, Parminder S; Reel, Smarti; et al; Beuschlein, Felix (2022). Whole blood methylome-derived features to discriminate endocrine hypertension. Clinical Epigenetics, 14(1):142.

Hiebert, Paul; Martyts, Anastasiya; Schwestermann, Jonas; Janke, Katharina; Hafner, Jürg; Boukamp, Petra; Mazza, Edoardo; Werner, Sabine (2022). Activation of Nrf2 in fibroblasts promotes a skin aging phenotype via an Nrf2-miRNA-collagen axis. Matrix Biology, 113:39-60.

Ilie, Ioana M; Caflisch, Amedeo (2022). Antibody binding increases the flexibility of the prion protein. BBA - Proteins and Proteomics, 1870(11-12):140827.

Bakhos, David; Blasco, Hélène; Galvin, John J; Ferreira, Carlos R; Blau, Nenad (2022). Clinical and biochemical footprints of inherited metabolic diseases. IX. Metabolic ear disease. Molecular Genetics and Metabolism, 137(3):223-229.

Humar, Rok; Schaer, Dominik J; Vallelian, Florence (2022). Erythrophagocytes in hemolytic anemia, wound healing, and cancer. Trends in Molecular Medicine, 28(11):906-915.

Hines, Timothy J; Tadenev, Abigail L D; Lone, Museer A; Hatton, Courtney L; Bagasrawala, Inseyah; Stum, Morgane G; Miers, Kathy E; Hornemann, Thorsten; Burgess, Robert W (2022). Precision mouse models of Yars/dominant intermediate Charcot-Marie-Tooth disease type C and Sptlc1/hereditary sensory and autonomic neuropathy type 1. Journal of Anatomy, 241(5):1169-1185.

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Biggel, Michael; Zurfluh, Katrin; Hoehn, Sarah; Schmitt, Kira; Frei, Andrea; Jans, Christoph; Stephan, Roger (2022). Complete Genome Sequence of Hafnia paralvei Isolate AVS0177, Harboring $mcr-9$ on a Plasmid. Microbiology Resource Announcements, 11(1):e0096621.

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Atac, David; Mohn, Lucas; Feil, Silke; Maggi, Kevin; Haenni, Dominik; Seebauer, Britta; Koller, Samuel; Berger, Wolfgang (2022). Functional Characterization of an In-Frame Deletion in the Basic Domain of the Retinal Transcription Factor ATOH7. International Journal of Molecular Sciences, 23(3):1053.

Cuomo-Haymour, Nagiua; Sigrist, Hannes; Ineichen, Christian; Russo, Giancarlo; Nüesch, Ursina; Gantenbein, Felix; Kulic, Luka; Knuesel, Irene; Bergamini, Giorgio; Pryce, Christopher Robert (2022). Evidence for Effects of Extracellular Vesicles on Physical, Inflammatory, Transcriptome and Reward Behaviour Status in Mice. International Journal of Molecular Sciences, 23(3):1028.

Silva, Renata Santos; Mattoso Miskulin Cardoso, Ana Paula; Giometti, Ines Cristina; D'Aprile, Loren; Garcia Santos, Francislaine Anelize; Maruyama, Arnaldo Shindi; Medeiros de Carvalho Sousa, Liza Margareth; Unniappan, Suraj; Kowalewski, Mariusz P; de Carvalho Papa, Paula (2022). Insulin induces steroidogenesis in canine luteal cells via PI3K-MEK-MAPK. Molecular and Cellular Endocrinology, 540:111518.

Coester, Bernd; Lutz, Thomas A; Le Foll, Christelle (2022). Mouse Microglial Calcitonin Receptor Knockout Impairs Hypothalamic Amylin Neuronal pSTAT3 Signaling but Lacks Major Metabolic Consequences. Metabolites, 12(1):51.

Ahunbay, Esra; Steffen, Fabio D; Zelger-Paulus, Susann; Sigel, Roland K O (2022). Chemical Dual End-Labeling of Large Ribozymes. In: Steger, Gerhard; Rosenbach, Hannah; Span, Ingrid. DNAzymes : Methods and Protocols. New York: Springer, 191-204.

Bornstein, Stefan R; Voit-Bak, Karin; Donate, Timo; Rodionov, Roman N; Gainetdinov, Raul R; Tselmin, Sergey; Kanczkowski, Waldemar; Müller, Gregor M; Achleitner, Martin; Wang, Jun; Licinio, Julio; Bauer, Michael; Young, Allan H; Thuret, Sandrine; Bechmann, Nicole; Straube, Richard (2022). Chronic post-COVID-19 syndrome and chronic fatigue syndrome: Is there a role for extracorporeal apheresis? Molecular Psychiatry, 27(1):34-37.

Sahadevan, Sonu; Pérez-Berlanga, Manuela; Polymenidou, Magdalini (2022). Identification of RNA–RBP Interactions in Subcellular Compartments by CLIP-Seq. In: Matějů, Daniel; Chao, Jeffrey A. The Integrated Stress Response - Methods and Protocols. New York: Springer, 305-323.

Kiener, Sarah; Rostaher, Ana; Rüfenacht, Silvia; Jagannathan, Vidhya; Sundberg, John P; Welle, Monika; Leeb, Tosso (2022). Independent DSG4 frameshift variants in cats with hair shaft dystrophy. Molecular Genetics and Genomics, 297(1):147-154.

Faraone, Stephen V; Newcorn, Jeffrey H; Cipriani, Andrea; Brandeis, Daniel; Kaiser, Anna; Hohmann, Sarah; Haege, Alexander; Cortese, Samuele (2022). Placebo and nocebo responses in randomised, controlled trials of medications for ADHD: a systematic review and meta-analysis. Molecular Psychiatry, 27(1):212-219.

Spiri, Silvan; Berger, Simon; Mereu, Louisa; DeMello, Andrew; Hajnal, Alex (2022). Reciprocal EGFR signaling in the anchor cell ensures precise inter-organ connection during Caenorhabditis elegans vulval morphogenesis. Development, 149(1):dev199900.

Gegenschatz-Schmid, Katharina; Buzzi, Stefano; Grossmann, Jonas; Roschitzki, Bernd; Urbanet, Riccardo; Heuberger, Roman; Glück, Dorothea; Zucker, Arik; Ehrbar, Martin (2022). Reduced thrombogenicity of surface-treated Nitinol implants steered by altered protein adsorption. Acta Biomaterialia, 137:331-345.

Grob, Stefan (2022). Tough Tissue Hi-C. In: Sexton, Tom. Spatial Genome Organization. New York: Springer, 35-50.

Dasmeh, Pouria; Wagner, Andreas (2022). Yeast Proteins may Reversibly Aggregate like Amphiphilic Molecules. Journal of Molecular Biology, 434(2):167352.

Schilling, Johannes; Jost, Christian; Ilie, Ioana Mariuca; Schnabl, Joachim; Buechi, Oralea; Eapen, Rohan S; Truffer, Rafaela; Caflisch, Amedeo; Forrer, Patrik (2022). Thermostable designed ankyrin repeat proteins (DARPins) as building blocks for innovative drugs. Journal of Biological Chemistry, 298(1):101403.

Eugster, Anne; Bostick, Magnolia L; Gupta, Nidhi; Mariotti-Ferrandiz, Encarnita; Kraus, Gloria; Meng, Wenzhao; Soto, Cinque; Trück, Johannes; Stervbo, Ulrik; Luning Prak, Eline T (2022). AIRR Community Guide to Planning and Performing AIRR-Seq Experiments. In: Langerak, Anton W. Immunogenetics : Methods and Protocols. New York, NY: Springer, 261-278.

Nowak, Albina; Dormond, Olivier; Monzambani, Véronique; Huynh-Do, Uyen; Barbey, Frédéric (2022). Agalsidase-β should be proposed as first line therapy in classic male Fabry patients with undetectable α-galactosidase A activity. Molecular Genetics and Metabolism, 137(1-2):173-178.

van Ginkel, Willem G; Winn, Shelley R; Dudley, Sandra; Krenik, Destine; Perez, Ruby; Rimann, Nicole; Thöny, Beat; Raber, Jacob; Harding, Cary O (2022). Biochemical and behavioural profile of NTBC treated Tyrosinemie type 1 mice. Molecular Genetics and Metabolism, 137(1-2):9-17.

Frey, Nina; Schwank, Gerald (2022). CRISPR-Based Screening in Three-Dimensional Organoid Cultures to Identify TGF-β Pathway Regulators. In: Zhike, Zi; Xuedong, Liu. TGF-Beta Signaling : Methods and Protocols. New York, NY: Springer, 99-111.

Stoy, Henriette; Luethi, Joel; Roessler, Fabienne K; Riemann, Johannes; Kaech, Andres; Lopes, Massimo (2022). Direct R-Loop Visualization on Genomic DNA by Native Automated Electron Microscopy. In: Aguilera, Andrés; Ruzov, Alexey. R-Loops: Methods and Protocols. New York: Springer, 1-20.

Aguilar, Claudio; Wissmann, Ramona; Fraefel, Cornel; Eichwald, Catherine (2022). Display of Heterologous Proteins in Bacillus Subtilis Biofilms for Enteric Immunization. In: Walker, John M; Brun, Alejandro. Vaccine Technologies for Veterinary Viral Diseases. New York, NY: Springer, 73-95.

Oussalah, Abderrahim; Siblini, Youssef; Hergalant, Sébastien; et al; Froese, D Sean; Baumgartner, Matthias R (2022). Epimutations in both the TESK2 and MMACHC promoters in the Epi-cblC inherited disorder of intracellular metabolism of vitamin B12. Clinical Epigenetics, 14:52.

Oborská-Oplová, Michaela; Fischer, Ute; Altvater, Martin; Panse, Vikram Govind (2022). Eukaryotic Ribosome assembly and Nucleocytoplasmic Transport. In: Walker, John M. Ribosome Biogenesis : Methods and Protocols. New York, NY: Springer, 99-126.

Marconi, Guya Diletta; Diomede, Francesca; Trubiani, Oriana; Porcheri, Cristina; Mitsiadis, Thimios A (2022). Exosomes as Carriers for Notch Molecules. In: Dongyu, Jia. Notch Signaling Research : Methods and Protocols. New York, NY: Springer, 197-208.

Zhang, Yanbin; Richter, Nicole; König, Christine; Kremer, Andreas E; Zimmermann, Katharina (2022). Generalized resistance to pruritogen-induced scratching in the C3H/HeJ strain. Frontiers in Molecular Neuroscience, 15:934564.

Hasler, Tobias; Tavares-Gomes, Leticia; Gut, Sereina; Swayambhu, Meghna; Gysi, Mario; Hausmann, Martin; Arora, Natasha; Hennet, Thierry (2022). Increase of intestinal bacterial sialidase activity exacerbates acute colitis in mice. Frontiers in Molecular Biosciences, 9:1075459.

Rust, Ruslan; Walker, Tara L (2022). Isolation and Culture of Adult Hippocampal Precursor Cells as Free-Floating Neurospheres. In: Deleyrolle, Loic P. Neural Progenitor Cells : Methods and Protocols. New York, NY: Springer, 33-44.

Zosel, Franziska; Holla, Andrea; Schuler, Benjamin (2022). Labeling of Proteins for Single-Molecule Fluorescence Spectroscopy. In: Munoz, Victor. Protein Folding Methods and Protocols. New York: Springer, 207-233.

Stoy, Henriette; Lang, Kevin S; Merrikh, Houra; Lopes, Massimo (2022). Locus-Specific Analysis of Replication Dynamics and Detection of DNA-RNA Hybrids by Immuno Electron Microscopy. In: Aguilera, Andrés; Ruzov, Alexey. R-Loops: Methods and Protocols. New York: Springer, 67-89.

Hankel, Julia; Mösseler, Anne; Hartung, C B; Rath, Silke; Schulten, Lisa; Visscher, Christian; Kamphues, Josef; Vital, Marius (2022). Responses of Ileal and Fecal Microbiota to Withdrawal of Pancreatic Enzyme Replacement Therapy in a Porcine Model of Exocrine Pancreatic Insufficiency. International Journal of Molecular Sciences, 23(19):11700.

Hadzic, Mélodie C A S; Sigel, Roland K O; Börner, Richard (2022). Single-Molecule Kinetic Studies of Nucleic Acids by Förster Resonance Energy Transfer. In: Steger, Gerhard; Rosenbach, Hannah; Span, Ingrid. DNAzymes : Methods and Protocols. New York: Springer, 173-190.

2021

Münz, Christian (2021). Co-Stimulatory Molecules during Immune Control of Epstein Barr Virus Infection. Biomolecules, 12:38.

Bencze, János; Szarka, Máté; Kóti, Balázs; Seo, Woosung; Hortobágyi, Tibor G; Bencs, Viktor; Módis, László V; Hortobágyi, Tibor (2021). Comparison of Semi-Quantitative Scoring and Artificial Intelligence Aided Digital Image Analysis of Chromogenic Immunohistochemistry. Biomolecules, 12(1):19.

Ashton, John M; Rehrauer, Hubert; Myers, Jason; Myers, Jacqueline; Zanche, Michelle; Balys, Malene; Foox, Jonathan; Mason, Chistopher E; Steen, Robert; Kuentzel, Marcy; Aquino, Catharine; Garcia-Reyero, Natàlia; Chittur, Sridar V (2021). Comparative Analysis of Single-Cell RNA Sequencing Platforms andMethods. Journal of Biomolecular Techniques, 32(4):3fc1f5fe.3eccea01.

Mason, L; Shic, F; Falck-Ytter, T; Chakrabarti, B; Charman, T; Loth, E; Tillmann, J; Banaschewski, T; Baron-Cohen, S; Bölte, S; Buitelaar, J; Durston, S; Oranje, B; Persico, A M; Beckmann, C; Bougeron, T; Dell'Acqua, F; Ecker, C; Moessnang, C; Murphy, D; Johnson, M H; Jones, E J H; LEAP Team; et al; Brandeis, Daniel (2021). Preference for biological motion is reduced in ASD: implications for clinical trials and the search for biomarkers. Molecular Autism, 12:74.

Miró‐Vinyals, Carla; Stein, Alina; Fischer, Sandro; Ward, Thomas R; Deliz Liang, Alexandria (2021). HaloTag Engineering for Enhanced Fluorogenicity and Kinetics with a Styrylpyridium Dye. Chembiochem, 22(24):3398-3401.

Tseilikman, Vadim; Komelkova, Maria; Kondashevskaya, Marina V; Manukhina, Eugenia; Downey, H Fred; Chereshnev, Valerii; Chereshneva, Margarita; Platkovskii, Pavel; Goryacheva, Anna; Pashkov, Anton; Fedotova, Julia; Tseilikman, Olga; Maltseva, Natalya; Cherkasova, Olga; Steenblock, Charlotte; Bornstein, Stefan R; Ettrich, Barbara; Chrousos, George P; Ullmann, Enrico (2021). A Rat Model of Post-Traumatic Stress Syndrome Causes Phenotype-Associated Morphological Changes and Hypofunction of the Adrenal Gland. International Journal of Molecular Sciences, 22(24):13235.

De Rossi, Pierre; Lewis, Amanda J; Furrer, Johanna; De Vos, Laura; Demeter, Tomas; Zbinden, Aurélie; Zhong, Weijia; Wiersma, Vera I; Scialo, Carlo; Weber, Julien; Guo, Zhongning; Scaramuzza, Stefano; Di Fabrizio, Marta; Böing, Carolin; Castaño‐Díez, Daniel; Al‐Amoudi, Ashraf; Pérez-Berlanga, Manuela; Lashley, Tammaryn; Stahlberg, Henning; Polymenidou, Magdalini (2021). FTLD‐TDP assemblies seed neoaggregates with subtype‐specific features via a prion‐like cascade. EMBO Reports, 22(12):e53877.

Zhang, Xiang; Schuhmachers, Patrick; Mourão, André; et al; Murer, Anita; Münz, Christian (2021). PLK1-dependent phosphorylation restrains EBNA2 activity and lymphomagenesis in EBV-infected mice. EMBO Reports, 22(12):e53007.

Panagopoulos, Andreas; Altmeyer, Matthias (2021). When the RAP (80) fades out, you can hear BRCA1 RING. EMBO Reports, 22(12):e54116.

Emmenegger, Marc; Kumar, Sreedhar Saseendran; Emmenegger, Vishalini; Malinauskas, Tomas; Buettner, Thomas; Rose, Laura; Schierack, Peter; Sprinzl, Martin F; Sommer, Clemens J; Lackner, Karl J; Aguzzi, Adriano; Roggenbuck, Dirk; Frauenknecht, Katrin B M (2021). Anti-prothrombin autoantibodies enriched after infection with SARS-CoV-2 and influenced by strength of antibody response against SARS-CoV-2 proteins. PLoS Pathogens, 17(12):e1010118.

Shchelik, Inga S; Molino, João V D; Gademann, Karl (2021). Biohybrid microswimmers against bacterial infections. Acta Biomaterialia, 136:99-110.

Zerbi, V; Pagani, M; Markicevic, M; Matteoli, M; Pozzi, D; Fagiolini, M; Bozzi, Y; Galbusera, A; Scattoni, M L; Provenzano, G; Banerjee, A; Helmchen, F; Basson, M A; Ellegood, J; Lerch, J P; Rudin, M; Gozzi, A; Wenderoth, N (2021). Brain mapping across 16 autism mouse models reveals a spectrum of functional connectivity subtypes. Molecular Psychiatry, 26(12):7610-7620.

Gerber, Reto; Robinson, Mark D (2021). Censcyt: censored covariates in differential abundance analysis in cytometry. BMC Bioinformatics, 22(1):235.

Le Verger, Kévin; González Ruiz, Laureano R; Billet, Guillaume (2021). Comparative anatomy and phylogenetic contribution of intracranial osseous canals and cavities in armadillos and glyptodonts (Xenarthra, Cingulata). Journal of Anatomy, 239(6):1473-1502.

Avilla-Royo, Eva; Gegenschatz-Schmid, Katharina; Grossmann, Jonas; Kockmann, Tobias; Zimmermann, Roland; Snedeker, Jess Gerrit; Ochsenbein-Kölble, Nicole; Ehrbar, Martin (2021). Comprehensive quantitative characterization of the human term amnion proteome. Matrix Biology Plus, 12:100084.

Sobottka-Brillout, Bettina; Nowak, Marta; Frei, Anja Laura; Haberecker, Martina; Merki, Samuel; Tumor Profiler Consortium; Levesque, Mitchell P; Dummer, Reinhard; Moch, Holger; Koelzer, Viktor Hendrik (2021). Correction: Establishing standardized immune phenotyping of metastatic melanoma by digital pathology. Laboratory investigation, 101(12):1637.

Mathis, Déborah; Sass, Jörn Oliver; Graubner, Claudia; Schoster, Angelika (2021). Diagnosis of atypical myopathy based on organic acid and acylcarnitine profiles and evolution of biomarkers in surviving horses. Molecular Genetics and Metabolism Reports, 29:100827.

Sobottka-Brillout, Bettina; Nowak, Marta; Frei, Anja Laura; Haberecker, Martina; Merki, Samuel; Dummer, Reinhard; Levesque, Mitchell P; Moch, Holger; Koelzer, Viktor Hendrik (2021). Establishing standardized immune phenotyping of metastatic melanoma by digital pathology. Laboratory investigation, 101(12):1561-1570.

Boehi, Flurina; Manetsch, Patrick; Hottiger, Michael O (2021). Interplay between ADP-ribosyltransferases and essential cell signaling pathways controls cellular responses. Cell Discovery, 7(1):104.

de Marco Zompit, Mara; Stucki, Manuel (2021). Mechanisms of genome stability maintenance during cell division. DNA repair, 108:103215.

Aboouf, Mostafa A; Armbruster, Julia; Thiersch, Markus; Gassmann, Max; Gödecke, Axel; Gnaiger, Erich; Kristiansen, Glen; Bicker, Anne; Hankeln, Thomas; Zhu, Hao; Gorr, Thomas A (2021). Myoglobin, expressed in brown adipose tissue of mice, regulates the content and activity of mitochondria and lipid droplets. Biochimica and Biophysica Acta. Molecular and Cell Biology of Lipids, 1866(12):159026.

Bernardo-Faura, Marti; Rinas, Melanie; Wirbel, Jakob; Pertsovskaya, Inna; Pliaka, Vicky; Messinis, Dimitris E; Vila, Gemma; Sakellaropoulos, Theodore; Faigle, Wolfgang; Stridh, Pernilla; Behrens, Janina R; Olsson, Tomas; Martin, Roland; Paul, Friedemann; Alexopoulos, Leonidas G; Villoslada, Pablo; Saez-Rodriguez, Julio (2021). Prediction of combination therapies based on topological modeling of the immune signaling network in multiple sclerosis. Genome Medicine, 13:117.

Greber, Urs F (2021). Two years into COVID-19 – Lessons in SARS-CoV-2 and a perspective from papers in FEBS Letters. FEBS letters, 595(23):2847-2853.

Brulefert, Adrien; Kraemer, Melanie; Cumin, Marie; Selle, Amandine; Hoste, Astrid; Gad, Hans-Henrik; Rühl, Julia; Madinier, Jean-Baptiste; Chaloin, Olivier; Münz, Christian; Desprès, Philippe; Mueller, Christopher George; Flacher, Vincent (2021). Chikungunya Virus Envelope Protein E2 Provides a Vector for Targeted Antigen Delivery to Human Dermal CD14+ Dendritic Cells. Journal of Investigative Dermatology, 141(12):2985-2989.e5.

Münz, Christian (2021). Non-canonical functions of autophagy proteins in immunity and infection. Molecular Aspects of Medicine, 82:100987.

Pape, Thorben; Hunkemöller, Anna Maria; Kümpers, Philipp; Haller, Hermann; David, Sascha; Stahl, Klaus (2021). Targeting the "sweet spot" in septic shock - A perspective on the endothelial glycocalyx regulating proteins Heparanase-1 and -2. Matrix Biology Plus, 12:100095.

Neuber, Sebastian; Emmert, Maximilian Y; Nazari-Shafti, Timo Z (2021). Hopes and Hurdles of Employing Mesenchymal Stromal Cells in the Treatment of Cardiac Fibrosis. International Journal of Molecular Sciences, 22(23):13000.

Meier-Schiesser, Barbara; Mellett, Mark; Ramirez-Fort, Marigdalia K; Maul, Julia-Tatjana; Klug, Annika; Winkelbeiner, Nicola; Fenini, Gabriele; Schafer, Peter; Contassot, Emmanuel; French, Lars E (2021). Phosphodiesterase-4 Inhibition Reduces Cutaneous Inflammation and IL-1β Expression in a Psoriasiform Mouse Model but Does Not Inhibit Inflammasome Activation. International Journal of Molecular Sciences, 22(23):12878.

Strekalova, Tatyana; Veniaminova, Ekaterina; Svirin, Evgeniy; Kopeikina, Ekaterina; Veremeyko, Tatyana; Yung, Amanda W Y; Proshin, Andrey; Tan, Shawn Zheng Kai; Khairuddin, Sharafuddin; Lim, Lee Wei; Lesch, Klaus-Peter; Walitza, Susanne; Anthony, Daniel C; Ponomarev, Eugene D (2021). Sex-Specific ADHD-like Behaviour, Altered Metabolic Functions, and Altered EEG Activity in Sialyltransferase ST3GAL5-Deficient Mice. Biomolecules, 11(12):1759.

Wang, Ting; Wang, Zheng; de Fabritus, Lauriane; Tao, Jinglian; Saied, Essa M; Lee, Ho-Joon; Ramazanov, Bulat R; Jackson, Benjamin; Burkhardt, Daniel; Parker, Mikhail; Gleinich, Anne S; Wang, Zhirui; Seo, Dong Eun; Zhou, Ting; Xu, Shihao; Alecu, Irina; Azadi, Parastoo; Arenz, Christoph; Hornemann, Thorsten; Krishnaswamy, Smita; van de Pavert, Serge A; Kaech, Susan M; Ivanova, Natalia B; Santori, Fabio R (2021). 1-deoxysphingolipids bind to COUP-TF to modulate lymphatic and cardiac cell development. Developmental Cell, 56(22):3128-3145.e15.

Marconi, Guya Diletta; Porcheri, Cristina; Trubiani, Oriana; Mitsiadis, Thimios A (2021). Three-Dimensional Culture Systems for Dissecting Notch Signalling in Health and Disease. International Journal of Molecular Sciences, 22(22):12473.

Glasauer, Stella M K; Triemer, Therese; Neef, Anne B; Neuhauss, Stephan C F; Luedtke, Nathan W (2021). DNA template strand segregation in developing zebrafish. Cell Chemical Biology, 28(11):1638-1647.e4.

Liu, Sanxiong; Aldinger, Kimberly A; Cheng, Chi Vicky; Kiyama, Takae; Dave, Mitali; McNamara, Hanna K; Zhao, Wukui; Stafford, James M; Descostes, Nicolas; Lee, Pedro; Caraffi, Stefano G; Ivanovski, Ivan; Errichiello, Edoardo; Zweier, Christiane; Zuffardi, Orsetta; Schneider, Michael; Papavasiliou, Antigone S; Perry, M Scott; Humberson, Jennifer; Cho, Megan T; Weber, Astrid; Swale, Andrew; Badea, Tudor C; Mao, Chai-An; Garavelli, Livia; Dobyns, William B; Reinberg, Danny (2021). NRF1 association with AUTS2-Polycomb mediates specific gene activation in the brain. Molecular Cell, 81(22):4757.

Peña‐Hernández, Rodrigo; Aprigliano, Rossana; Carina Frommel, Sandra; Pietrzak, Karolina; Steiger, Seraina; Roganowicz, Marcin; Lerra, Luigi; Bizzarro, Juliana; Santoro, Raffaella (2021). BAZ2A‐mediated repression via H3K14ac‐marked enhancers promotes prostate cancer stem cells. EMBO Reports, 22(11):e53014.

Malhis, Marwa; Kaniyappan, Senthilvelrajan; Aillaud, Isabelle; Chandupatla, Ram Reddy; Ramirez, Lisa Marie; Zweckstetter, Markus; Horn, Anselm H C; Mandelkow, Eckhard; Sticht, Heinrich; Funke, Susanne Aileen (2021). Potent Tau Aggregation Inhibitor D-Peptides Selected against Tau-Repeat 2 Using Mirror Image Phage Display. Chembiochem, 22(21):3049-3059.

Srimat Kandadai, Keertana; Kotur, Monika B; Dokalis, Nikolaos; Amrein, Irmgard; Keller, Christian W; Münz, Christian; Wolfer, David; Prinz, Marco; Lünemann, Jan D (2021). ATG5 in microglia does not contribute vitally to autoimmune neuroinflammation in mice. Autophagy, 17(11):3566-3576.

Hirota, Shun K; Yasumoto, Akiko A; Nitta, Kozue; Tagane, Misa; Miki, Nozomu; Suyama, Yoshihisa; Yahara, Tetsukazu (2021). Evolutionary history of Hemerocallis in Japan inferred from chloroplast and nuclear phylogenies and levels of interspecific gene flow. Molecular Phylogenetics and Evolution, 164:107264.

Luciani, Alessandro; Denley, Matthew C S; Govers, Larissa P; Sorrentino, Vincenzo; Froese, D Sean (2021). Mitochondrial disease, mitophagy, and cellular distress in methylmalonic acidemia. Cellular and Molecular Life Sciences, 78(21-22):6851-6867.

Deán‐Ben, Xosé Luís; Razansky, Daniel (2021). Optoacoustic imaging of the skin. Experimental Dermatology, 30(11):1598-1609.

Zheng, Jia; Guo, Ning; Wagner, Andreas (2021). Mistranslation Reduces Mutation Load in Evolving Proteins through Negative Epistasis with DNA Mutations. Molecular Biology and Evolution, 38(11):4792-4804.

Heinzer, Daniel; Avar, Merve; Pease, Daniel Patrick; Dhingra, Ashutosh; Yin, Jiang-An; Schaper, Elke; Doğançay, Berre; Emmenegger, Marc; Spinelli, Anna; Maggi, Kevin; Chincisan, Andra; Mead, Simon; Hornemann, Simone; Heutink, Peter; Aguzzi, Adriano (2021). Novel regulators of PrPC biosynthesis revealed by genome-wide RNA interference. PLoS Pathogens, 17(10):e1010013.

Balakrishna, Suraj; Salazar-Vizcaya, Luisa; Schmidt, Axel J; Kachalov, Viacheslav; Kusejko, Katharina; Thurnheer, Maria Christine; Roth, Jan A; Nicca, Dunja; Cavassini, Matthias; Battegay, Manuel; Schmid, Patrick; Bernasconi, Enos; Günthard, Huldrych F; Rauch, Andri; Kouyos, Roger D; Swiss HIV Cohort Study (2021). Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: A modelling study. PLoS Computational Biology, 17(10):e1009529.

Flores Ramos, Stephany; Brugger, Silvio D; Escapa, Isabel Fernandez; Skeete, Chelsey A; Cotton, Sean L; Eslami, Sara M; Gao, Wei; Bomar, Lindsey; Tran, Tommy H; Jones, Dakota S; Minot, Samuel; Roberts, Richard J; Johnston, Christopher D; Lemon, Katherine P (2021). Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome. mSystems, 6(5):e0042521.

Storti, Gabriele; Favi, Evaldo; Albanesi, Francesca; Kim, Bong-Sung; Cervelli, Valerio (2021). Adipose-Derived Stem/Stromal Cells in Kidney Transplantation: Status Quo and Future Perspectives. International Journal of Molecular Sciences, 22(20):11188.

Divari, Sara; Danelli, Marta; Pregel, Paola; Ghielmetti, Giovanni; Borel, Nicole; Bollo, Enrico (2021). Biomolecular investigation of Bartonella spp. in wild rodents of two Swiss regions. Pathogens, 10(10):1331.

Elstner, Matthias; Olszewski, Konrad; Prokisch, Holger; Klopstock, Thomas; Murgia, Marta (2021). Multi-Omics Approach to Mitochondrial DNA Damage in Human Muscle Fibers. International Journal of Molecular Sciences, 22(20):11080.

Klemmer, Viviane Anna; Khera, Nupur; Siegenthaler, Barbara M; Bhattacharya, Indranil; Weber, Franz E; Ghayor, Chafik (2021). Effect of N-Vinyl-2-Pyrrolidone (NVP), a Bromodomain-Binding Small Chemical, on Osteoblast and Osteoclast Differentiation and Its Potential Application for Bone Regeneration. International Journal of Molecular Sciences, 22(20):11052.

Zalcman, Nomi; Gutreiman, Mijal; Shahar, Tal; Weller, Michael; Lavon, Iris (2021). Androgen Receptor Activation in Glioblastoma Can Be Achieved by Ligand-Independent Signaling through EGFR-A Potential Therapeutic Target. International Journal of Molecular Sciences, 22(20):10954.

Börold, Jacob; Eletto, Davide; Busnadiego, Idoia; Mair, Nina K; Moritz, Eva; Schiefer, Samira; Schmidt, Nora; Petric, Philipp P; Wong, W Wei-Lynn; Schwemmle, Martin; Hale, Benjamin G (2021). BRD9 is a druggable component of interferon-stimulated gene expression and antiviral activity. EMBO Reports, 22(10):e52823.

Haas, Dorothea; Hauke, Jana; Schwarz, Kathrin V; Consalvi, Lucia; Trefz, Friedrich K; Blau, Nenad; Hoffmann, Georg F; Burgard, Peter; Garbade, Sven F; Okun, Jürgen G (2021). Differences of Phenylalanine Concentrations in Dried Blood Spots and in Plasma: Erythrocytes as a Neglected Component for This Observation. Metabolites, 11(10):680.

Kiessling, Eva; Nötzli, Sarah; Todorova, Vyara; Forny, Merima; Baumgartner, Matthias R; Samardzija, Marijana; Krijt, Jakub; Kožich, Viktor; Grimm, Christian; Froese, D Sean (2021). Absence of MMACHC in peripheral retinal cells does not lead to an ocular phenotype in mice. Biochimica et Biophysica Acta. Molecular Basis of Disease, 1867(10):166201.

Säle, Verena; Palenzuela, Javier; Azcón-Aguilar, Concepción; Sánchez-Castro, Iván; da Silva, Gladstone Alves; Seitz, Benjamin; Sieverding, Ewald; van der Heijden, Marcel G A; Oehl, Fritz (2021). Ancient lineages of arbuscular mycorrhizal fungi provide little plant benefit. Mycorrhiza, 31(5):559-576.

Klionsky, Daniel J; Petroni, Giulia; Amaravadi, Ravi K; et al; Münz, Christian (2021). Autophagy in major human diseases. EMBO Journal Online, 40(19):e108863.

Zimoch, Jakub; Zielinska, Dominika; Michalak-Micka, Katarzyna; Rütsche, Dominic; Böni, Roland; Biedermann, Thomas; Klar, Agnes S (2021). Bio-engineering a prevascularized human tri-layered skin substitute containing a hypodermis. Acta Biomaterialia, 134:215-227.

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Wueest, Stephan; Seelig, Eleonora; Timper, Katharina; Lyngbaek, Mark P; Karstoft, Kristian; Donath, Marc Y; Ellingsgaard, Helga; Konrad, Daniel (2021). IL-6 Receptor Blockade Increases Circulating Adiponectin Levels in People with Obesity: An Explanatory Analysis. Metabolites, 11(2):79.

Kachalov, Viacheslav N; Nguyen, Huyen; Balakrishna, Suraj; Salazar-Vizcaya, Luisa; Sommerstein, Rami; Kuster, Stefan P; Hauser, Anthony; Abel Zur Wiesch, Pia; Klein, Eili; Kouyos, Roger D (2021). Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level. PLoS Computational Biology, 17:e1008446.

Karnaukhova, Elena; Owczarek, Catherine; Schmidt, Peter; Schaer, Dominik J; Buehler, Paul W (2021). Human Plasma and Recombinant Hemopexins: Heme Binding Revisited. International Journal of Molecular Sciences, 22(3):1199.

Ahlfeld, Tilman; Lode, Anja; Richter, Richard Frank; Pradel, Winnie; Franke, Adrian; Rauner, Martina; Stadlinger, Bernd; Lauer, Günter; Gelinsky, Michael; Korn, Paula (2021). Toward Biofabrication of Resorbable Implants Consisting of a Calcium Phosphate Cement and Fibrin-A Characterization In Vitro and In Vivo. International Journal of Molecular Sciences, 22(3):1218.

Devrim-Lanpir, Aslı; Hill, Lee; Knechtle, Beat (2021). How N-Acetylcysteine Supplementation Affects Redox Regulation, Especially at Mitohormesis and Sarcohormesis Level: Current Perspective. Antioxidants, 10(2):153.

Fiedorowicz, Michal; Choragiewicz, Tomasz; Turski, Waldemar A; Kocki, Tomasz; Nowakowska, Dominika; Wertejuk, Kamila; Kamińska, Agnieszka; Avitabile, Teresio; Wełniak-Kaminska, Marlena; Grieb, Pawel; Zweifel, Sandrine; Rejdak, Robert; Toro, Mario Damiano (2021). Tryptophan Pathway Abnormalities in a Murine Model of Hereditary Glaucoma. International Journal of Molecular Sciences, 22(3):1039.

Posada-Céspedes, Susana; Seifert, David; Topolsky, Ivan; Jablonski, Kim Philipp; Metzner, Karin J; Beerenwinkel, Niko (2021). V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data. Bioinformatics, 37(12):1673-1680.

Almiñana, Carmen; Rudolf Vegas, Alba; Tekin, Muhittin; Hassan, Mubbashar; Uzbekov, Rustem; Fröhlich, Thomas; Bollwein, Heiner; Bauersachs, Stefan (2021). Isolation and characterization of equine uterine extracellular vesicles: a comparative methodological study. International Journal of Molecular Sciences, 22(2):979.

Mukherjee, Debanjan; Wagh, Ganesh; Mokalled, Mayssa H; Kontarakis, Zacharias; Dickson, Amy L; Rayrikar, Amey; Günther, Stefan; Poss, Kenneth D; Stainier, Didier Y R; Patra, Chinmoy (2021). Ccn2a is an injury-induced matricellular factor that promotes cardiac regeneration in zebrafish. Development, 148(2):dev193219.

Conde, Javier; Schwarzfischer, Marlene; Katkeviciute, Egle; Häfliger, Janine; Niechcial, Anna; Brillant, Nathalie; Manzini, Roberto; Bäbler, Katharina; Atrott, Kirstin; Lang, Silvia; Scharl, Michael (2021). Titanium Dioxide Presents a Different Profile in Dextran Sodium Sulphate-Induced Experimental Colitis in Mice Lacking the IBD Risk Gene Ptpn2 in Myeloid Cells. International Journal of Molecular Sciences, 22(2):772.

Tusup, Marina; Cheng, Phil F; Picardi, Ernesto; Raziunaite, Austeja; Dummer, Reinhard; Levesque, Mitchell P; French, Lars E; Guenova, Emmanuella; Kundig, Thomas M; Pascolo, Steve (2021). Evaluation of the Interplay between the ADAR Editome and Immunotherapy in Melanoma. Non-Coding RNA, 7:5.

Bierbaumer, Lisa; Katschnig, Anna M; Radic-Sarikas, Branka; Kauer, Maximilian O; Petro, Jeffrey A; Högler, Sandra; Gurnhofer, Elisabeth; Pedot, Gloria; Schäfer, Beat W; Schwentner, Raphaela; Mühlbacher, Karin; Kromp, Florian; Aryee, Dave N T; Kenner, Lukas; Uren, Aykut; Kovar, Heinrich (2021). YAP/TAZ inhibition reduces metastatic potential of Ewing sarcoma cells. Oncogenesis, 10:2.

Kubacki, Jakub; Hardmeier, Isabelle; Qi, Weihong; Flacio, Eleonora; Tonolla, Mauro; Fraefel, Cornel (2021). Complete genome sequence of a Rhabdovirus strain from culex mosquitos collected in Southern Switzerland. Microbiology Resource Announcements, 10(1):e01234-20.

Goba, Inguna; Goricanec, David; Schum, Dominik; Hillenbrand, Matthias; Plückthun, Andreas; Hagn, Franz (2021). Probing the Conformation States of Neurotensin Receptor 1 Variants by NMR Site-Directed Methyl Labeling. Chembiochem, 22(1):139-146.

Teale, William D; Pasternak, Taras; Dal Bosco, Cristina; Dovzhenko, Alexander; Kratzat, Krystyna; Bildl, Wolfgang; Schwörer, Manuel; Falk, Thorsten; Ruperti, Benadetto; Schaefer, Jonas V; Shahriari, Mojgan; Pilgermayer, Lena; Li, Xugang; Lübben, Florian; Plückthun, Andreas; Schulte, Uwe; Palme, Klaus (2021). Flavonol-mediated stabilization of PIN efflux complexes regulates polar auxin transport. EMBO Journal Online, 40:e104416.

Moura, Rita; Borges, Margarida; Vila Pouca, Maria C P; Oliveira, Dulce A; Parente, Marco P L; Kimmich, Nina; Mascarenhas, Teresa; Natal, Renato M (2021). A numerical study on fetal head molding during labor. International Journal for Numerical Methods in Biomedical Engineering, 37(1):e3411.

Sticco, Matthew J; Peña Palomino, Perla A; Lukacsovich, David; Thompson, Brianna L; Földy, Csaba; Ressl, Susanne; Martinelli, David C (2021). C1QL3 promotes cell‐cell adhesion by mediating complex formation between ADGRB3/BAI3 and neuronal pentraxins. FASEB Journal, 35(1):e21194.

Brown, Steven A; Sinues, Pablo (2021). Circadian Metabolomics from Breath. In: Brown, Steven A. Circadian Clocks : Methods and Protocols. New York: Springer, 149-156.

Zabulica, Mihaela; Srinivasan, Raghuraman C; Akcakaya, Pinar; Allegri, Gabriella; Bestas, Burcu; Firth, Mike; Hammarstedt, Christina; Jakobsson, Tomas; Jakobsson, Towe; Ellis, Ewa; Jorns, Carl; Makris, Georgios; Scherer, Tanja; Rimann, Nicole; van Zuydam, Natalie R; Gramignoli, Roberto; Forslöw, Anna; Engberg, Susanna; Maresca, Marcello; Rooyackers, Olav; Thöny, Beat; Häberle, Johannes; Rosen, Barry; Strom, Stephen C (2021). Correction of a urea cycle defect after ex vivo gene editing of human hepatocytes. Molecular Therapy, 29(5):1903-1917.

Tayyrov, Annageldi; Schnetzler, Michèle; Gillis-Germitsch, Nina; Schnyder, Manuela (2021). Genetic diversity of the cardiopulmonary canid nematode Angiostrongylus vasorum within and between rural and urban fox populations. Infection, Genetics and Evolution, 87:104618.

Mathew, Corina; Weiß, R Gregor; Giese, Christoph; Lin, Chia-Wei; Losfeld, Marie-Estelle; Glockshuber, Rudi; Riniker, Sereina; Aebi, Markus (2021). Glycan–protein interactions determine kinetics of N-glycan remodeling. RSC Chemical Biology, 2(3):917-931.

Thieme, Michael; Roulin, Anne C (2021). Identification of Active Transposable Elements in Plants: The Mobilome-Seq Approach. In: Cho, Jungnam. Plant Transposable Elements. New York: Springer, 95-102.

Hopp, Ann-Katrin; Hottiger, Michael O (2021). Investigation of Mitochondrial Via Immunofluorescence. In: Weissig, V; Edeas, M. Mitochondiral Medicine. New York: Springer, 165-171.

Du, Ngoc-Hien; Brown, Steven A (2021). Measuring Circadian Rhythms in Human Cells. In: Brown, Steven A. Circadian Clocks : Methods and Protocols. New York: Springer, 53-67.

Hopp, Ann-Katrin; Teloni, Federico; Bisceglie, Lavinia; Gondrand, Corentin; Raith, Fabio; Nowak, Kathrin; Muskalla, Lukas; Howald, Anna; Pedrioli, Patrick G A; Johnsson, Kai; Altmeyer, Matthias; Pedrioli, Deena M Leslie; Hottiger, Michael O (2021). Mitochondrial NAD+ Controls Nuclear ARTD1-Induced ADP-Ribosylation. Molecular Cell, 81(2):340-354.e5.

Hernando, Nati; Gagnon, Kenneth; Lederer, Eleanor (2021). Phosphate Transport in Epithelial and Nonepithelial Tissue. Physiological reviews, 101(1):1-35.

Eyring, Jillianne; Lin, Chia-Wei; Ngwa, Elsy Mankah; Boilevin, Jérémy; Pesciullesi, Giorgio; Locher, Kaspar P; Darbre, Tamis; Reymond, Jean-Louis; Aebi, Markus (2021). Substrate specificities and reaction kinetics of the yeast oligosaccharyltransferase isoforms. Journal of Biological Chemistry, 296:100809.

Gysin, Tina; Kowalewski, Mariusz P (2021). The involvement of hypoxia-inducible factor 1α (HIF1α)-stabilising factors in steroidogenic acute regulatory (STAR) protein-dependent steroidogenesis in murine KK1 granulosa cells in vitro. Reproduction, Fertility and Development, 33(18):865-880.

Carlantoni, Claudia; Allanki, Srinivas; Kontarakis, Zacharias; Rossi, Andrea; Piesker, Janett; Günther, Stefan; Stainier, Didier Y R (2021). Tie1 regulates zebrafish cardiac morphogenesis through Tolloid-like 1 expression. Developmental Biology, 469:54-67.

Skaria, Tom; Wälchli, Thomas; Vogel, Johannes (2021). CGRP receptor antagonism in COVID-19: potential cardiopulmonary adverse effects. Trends in Molecular Medicine, 27(1):7-10.

Jahn, Tabea; Clark, Christopher; Kerksiek, Anja; Lewczuk, Piotr; Lütjohann, Dieter; Popp, Julius (2021). Cholesterol metabolites and plant sterols in cerebrospinal fluid are associated with Alzheimer's cerebral pathology and clinical disease progression. Journal of Steroid Biochemistry and Molecular Biology, 205:105785.

Klionsky, Daniel J; Abdel-Aziz, Amal Kamal; Abdelfatah, Sara; et al; Bornhauser, Beat C (2021). Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy, 17(1):1-382.

Werdermann, Martin; Berger, Ilona; Scriba, Laura D; Santambrogio, Alice; Schlinkert, Pia; Brendel, Heike; Morawietz, Henning; Schedl, Andreas; Peitzsch, Mirko; King, Aileen J F; Andoniadou, Cynthia L; Bornstein, Stefan R; Steenblock, Charlotte (2021). Insulin and obesity transform hypothalamic-pituitary-adrenal axis stemness and function in a hyperactive state. Molecular Metabolism, 43:101112.

Pánisová, Elena; Unger, Wendy W J; Berger, Christoph; Meyer Sauteur, Patrick M (2021). Mycoplasma pneumoniae-Specific IFN-γ-Producing CD4 Effector-Memory T Cells Correlate with Pulmonary Disease. American Journal of Respiratory Cell and Molecular Biology, 64(1):143-146.

Mun, YeVin; Nombela-Arrieta, César (2021). 3D Microscopy of Murine Bone Marrow Hematopoietic Tissues. Methods in Molecular Biology, 2308:127-138.

Schwarz, Kyriakos; Allam, Ahmed; Perez Gonzalez, Nicolas Andres; Krauthammer, Michael (2021). AttentionDDI: Siamese attention‑based deep learning method for drug–drug interaction predictions. BMC Bioinformatics, 22(1):412.

Pischedda, Sara; O’Connor, Daniel; Fairfax, Benjamin P; Salas, Antonio; Martinon-Torres, Federico; Pollard, Andrew J; Trück, Johannes (2021). Changes in epigenetic profiles throughout early childhood and their relationship to the response to pneumococcal vaccination. Clinical Epigenetics, 13:29.

Mujakić, Izabela; Andrei, Adrian-Stefan; Shabarova, Tanja; Fecskeová, Lívia Kolesár; Salcher, Michaela M; Piwosz, Kasia; Ghai, Rohit; Koblížek, Michal (2021). Common Presence of Phototrophic Gemmatimonadota in Temperate Freshwater Lakes. mSystems, 6(2):01241-20.

Stritt, Christoph; Roulin, Anne C (2021). Detecting Signatures of TE Polymorphisms in Short-Read Sequencing Data. In: Cho, Jungnam. Plant transposable elements. New York: Springer, 177-187.

Bulzu, Paul-Adrian; Kavagutti, Vinicius Silva; Chiriac, Maria-Cecilia; Vavourakis, Charlotte D; Inoue, Keiichi; Kandori, Hideki; Andrei, Adrian-Stefan; Ghai, Rohit (2021). Heliorhodopsin Evolution Is Driven by Photosensory Promiscuity in Monoderms. mSphere, 6(6):e00661-21.

Cervantes-Gracia, Karla; Chahwan, Richard; Husi, Holger (2021). Integrative Analysis of Incongruous Cancer Genomics and Proteomics Datasets. Methods in Molecular Biology, 2361:291-305.

Karakulak, Tülay; Moch, Holger; von Mering, Christian; Kahraman, Abdullah (2021). Probing Isoform Switching Events in Various Cancer Types: Lessons From Pan-Cancer Studies. Frontiers in Molecular Biosciences, 8:726902.

2020

Amaral, Ana R; Chanfana, Cátia; Smith, Brian D; Mansur, Rubaiyat; Collins, Tim; Baldwin, Robert; Minton, Gianna; Parra, Guido J; Krützen, Michael; Jefferson, Thomas A; Karczmarski, Leszek; Guissamulo, Almeida; Brownell, Robert L; Rosenbaum, Howard C (2020). Genomics of Population Differentiation in Humpback Dolphins, Sousa spp. in the Indo-Pacific Ocean. Journal of Heredity, 111(7):652-660.

Saikia, Eashan; Läubli, Nino F; Burri, Jan T; Rüggeberg, Markus; Schlepütz, Christian M; Vogler, Hannes; Burgert, Ingo; Herrmann, Hans J; Nelson, Bradley J; Grossniklaus, Ueli; Wittel, Falk K (2020). Kinematics governing mechanotransduction in the sensory hair of the Venus flytrap. International Journal of Molecular Sciences, 22:280.

Stark, Stefan G; Ficek, Joanna; Locatello, Francesco; Bonilla, Ximena; Chevrier, Stéphane; Singer, Franziska; Tumor Profiler Consortium; Rätsch, Gunnar; Lehmann, Kjong-Van (2020). SCIM: universal single-cell matching with unpaired feature sets. Bioinformatics, 36(Supp.):i919-i927.

Bischoff, Nicolaj S; de Kok, Theo M; Sijm, Dick T H M; van Breda, Simone G; Briedé, Jacco J; Castenmiller, Jacqueline J M; Opperhuizen, Antoon; Chirino, Yolanda I; Dirven, Hubert; Gott, David; Houdeau, Eric; Oomen, Agnes G; Poulsen, Morten; Rogler, Gerhard; van Loveren, Henk (2020). Possible Adverse Effects of Food Additive E171 (Titanium Dioxide) Related to Particle Specific Human Toxicity, Including the Immune System. International Journal of Molecular Sciences, 22:207.

Estrada Brull, Anna; Rost, Felix; Oderbolz, Josua; Kirchner, Florian R; Leibundgut-Landmann, Salomé; Oxenius, Annette; Joller, Nicole (2020). CD85k Contributes to Regulatory T Cell Function in Chronic Viral Infections. International Journal of Molecular Sciences, 22(1):31.

Kandaswamy, Dinesh Kumar; Prakash, Makarla Venkata Sathya; Graw, Jochen; Koller, Samuel; Magyar, István; Tiwari, Amit; Berger, Wolfgang; Santhiya, Sathiyaveedu Thyagarajan (2020). Application of WES Towards Molecular Investigation of Congenital Cataracts: Identification of Novel Alleles and Genes in a Hospital-Based Cohort of South India. International Journal of Molecular Sciences, 21(24):9569.

Cheng, Donghang; Gao, Guozhen; Di Lorenzo, Alessandra; Jayne, Sandrine; Hottiger, Michael O; Richard, Stephane; Bedford, Mark T (2020). Genetic evidence for partial redundancy between the arginine methyltransferases CARM1 and PRMT6. Journal of Biological Chemistry, 295(50):17060-17070.

Huemer, Markus; Mairpady Shambat, Srikanth; Brugger, Silvio D; Zinkernagel, Annelies S (2020). Antibiotic resistance and persistence—Implications for human health and treatment perspectives. EMBO Reports, 21(12):0.

Dalcher, Damian; Tan, Jennifer Yihong; Bersaglieri, Cristiana; Peña-Hernández, Rodrigo; Vollenweider, Eva; Zeyen, Stefan; Schmid, Marc W; Bianchi, Valerio; Butz, Stefan;