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2022

Komlósi, Zsolt I; van de Veen, Willem; Kovács, Nóra; Szűcs, Gergő; Sokolowska, Milena; O'Mahony, Liam; Akdis, Mubeccel; Akdis, Cezmi A (2022). Cellular and molecular mechanisms of allergic asthma. Molecular Aspects of Medicine, 85:100995.

Vasella, Mauro; Wagner, Ulrich; Fritz, Christine; Seidl, Kati; Giudici, Luca; Exner, Gerhard Ulrich; Moch, Holger; Wild, Peter Johannes; Bode-Lesniewska, Beata (2022). Novel RGAG1-BCOR gene fusion revealed in a somatic soft tissue sarcoma with a long follow-up. Virchows Archiv, 480(5):1107-1114.

Deibel, Ansgar; Meyer zu Schwabedissen, Cordula; Husmann, Lars; Grimm, Felix; Deplazes, Peter; Reiner, Cäcilia S; Müllhaupt, Beat (2022). Characteristics and Clinical Course of Alveolar Echinococcosis in Patients with Immunosuppression-Associated Conditions: A Retrospective Cohort Study. Pathogens, 11(4):441.

Dzung, Andreas; Saltari, Annalisa; Tiso, Natascia; Lyck, Ruth; Dummer, Reinhard; Levesque, Mitchell P (2022). STK11 Prevents Invasion through Signal Transducer and Activator of Transcription 3/5 and FAK Repression in Cutaneous Melanoma. Journal of Investigative Dermatology, 142(4):1171-1182.e10.

Sieber-Ruckstuhl, Nadja S; Tham, Wai Kin; Baumgartner, Franziska; Selva, Jeremy John; Wenk, Markus R; Burla, Bo; Boretti, Felicitas S (2022). Serum Lipidome Signatures of Dogs with Different Endocrinopathies Associated with Hyperlipidemia. Metabolites, 12(4):306.

Marti, Hanna; Jelocnik, Martina (2022). Animal Chlamydiae: A Concern for Human and Veterinary Medicine. Pathogens, 11(3):364.

Alfsen, G Cecilie; Gulczyński, Jacek; Kholová, Ivana; Latten, Bart; Martinez, Javier; Metzger, Myriam; Michaud, Katarzyna; Pontinha, Carlos M; Rakislova, Natalia; Rotman, Samuel; Varga, Zsuzsanna; Wassilew, Katharina; Zinserling, Vsevolod (2022). Code of practice for medical autopsies: a minimum standard position paper for pathology departments performing medical (hospital) autopsies in adults. Virchows Archiv, 480(3):509-517.

Chan, Tatjana; Grisch-Chan, Hiu Man; Schmierer, Philipp; Subotic, Ulrike; Rimann, Nicole; Scherer, Tanja; Hetzel, Udo; Bozza, Matthias; Harbottle, Richard; Williams, James A; Steblaj, Barbara; Ringer, Simone K; Häberle, Johannes; Sidler, Xaver; Thöny, Beat (2022). Delivery of non-viral naked DNA vectors to liver in small weaned pigs by hydrodynamic retrograde intrabiliary injection. Molecular Therapy - Methods & Clinical Development, 24:268-279.

Tusup, Marina; Kündig, Thomas M; Pascolo, Steve (2022). Epitranscriptomics modifier pentostatin indirectly triggers Toll-like receptor 3 and can enhance immune infiltration in tumors. Molecular Therapy, 30(3):1163-1170.

Herger, Nick; Bermudez-Lekerika, Paola; Farshad, Mazda; Albers, Christoph E; Distler, Oliver; Gantenbein, Benjamin; Dudli, Stefan (2022). Should Degenerated Intervertebral Discs of Patients with Modic Type 1 Changes Be Treated with Mesenchymal Stem Cells? International Journal of Molecular Sciences, 23(5):2721.

Potente, Giacomo; Léveillé-Bourret, Étienne; Yousefi, Narjes; Choudhury, Rimjhim Roy; Keller, Barbara; Diop, Seydina Issa; Duijsings, Daniël; Pirovano, Walter; Lenhard, Michael; Szövényi, Péter; Conti, Elena (2022). Comparative Genomics Elucidates the Origin of a Supergene Controlling Floral Heteromorphism. Molecular Biology and Evolution, 39(2):msac035.

Emmenegger, Marc; Kumar, Sreedhar Saseendran; Emmenegger, Vishalini; Malinauskas, Tomas; Buettner, Thomas; Rosen, Laura E; Schierack, Peter; Sprinzl, Martin F; Sommer, Clemens J; Lackner, Karl J; Aguzzi, Adriano; Roggenbuck, Dirk; Frauenknecht, Katrin Barbara Magda (2022). Correction: Anti-prothrombin autoantibodies enriched after infection with SARS-CoV-2 and influenced by strength of antibody response against SARS-CoV-2 proteins. PLoS Pathogens, 18(2):e1010289.

Panetti, Camilla; Kao, Kung‐Chi; Joller, Nicole (2022). Dampening antiviral immunity can protect the host. FEBS Journal, 289(3):634-646.

De Cuyper, Annelies; Winkler, Daniela E; Tütken, Thomas; Bosch, Guido; Hummel, Jürgen; Kreuzer, Michael; Muñoz Saravia, Arturo; Janssens, Geert P J; Clauss, Marcus (2022). Digestion of bamboo compared to grass and lucerne in a small hindgut fermenting herbivore, the guinea pig (Cavia porcellus). Journal of Experimental Zoology. Part A, Ecological and Integrative Physiology, 337(2):128-140.

Heckmeier, Philipp J; Ruf, Jeannette; Buhrke, David; Janković, Brankica G; Hamm, Peter (2022). Signal Propagation Within the MCL-1/BIM Protein Complex. Journal of Molecular Biology:Epub ahead of print.

Cuomo-Haymour, Nagiua; Bergamini, Giorgio; Russo, Giancarlo; Kulic, Luka; Knuesel, Irene; Martin, Roland; Huss, André; Tumani, Hayrettin; Otto, Markus; Pryce, Christopher R (2022). Differential Expression of Serum Extracellular Vesicle miRNAs in Multiple Sclerosis: Disease-Stage Specificity and Relevance to Pathophysiology. International Journal of Molecular Sciences, 23(3):1664.

Alphandéry, Edouard (2022). Nanomaterials as Ultrasound Theragnostic Tools for Heart Disease Treatment/Diagnosis. International Journal of Molecular Sciences, 23(3):1683.

Ruiz-Serrano, Amalia; Boyle, Christina N; Monné Rodríguez, Josep M; Günter, Julia; Jucht, Agnieszka E; Pfundstein, Svende; Bapst, Andreas M; Lutz, Thomas A; Wenger, Roland H; Scholz, Carsten C (2022). The Deubiquitinase OTUB1 Is a Key Regulator of Energy Metabolism. International Journal of Molecular Sciences, 23(3):1536.

Zizmare, Laimdota; Boyle, Christina N; Buss, Sabrina; Louis, Sandrine; Kuebler, Laura; Mulay, Ketki; Krüger, Ralf; Steinhauer, Lara; Mack, Isabelle; Rodriguez Gomez, Manuel; Herfert, Kristina; Ritze, Yvonne; Trautwein, Christoph (2022). Roux-En-Y Gastric Bypass (RYGB) Surgery during High Liquid Sucrose Diet Leads to Gut Microbiota-Related Systematic Alterations. International Journal of Molecular Sciences, 23(3):1126.

Cuomo-Haymour, Nagiua; Sigrist, Hannes; Ineichen, Christian; Russo, Giancarlo; Nüesch, Ursina; Gantenbein, Felix; Kulic, Luka; Knuesel, Irene; Bergamini, Giorgio; Pryce, Christopher Robert (2022). Evidence for Effects of Extracellular Vesicles on Physical, Inflammatory, Transcriptome and Reward Behaviour Status in Mice. International Journal of Molecular Sciences, 23(3):1028.

Silva, Renata Santos; Mattoso Miskulin Cardoso, Ana Paula; Giometti, Ines Cristina; D'Aprile, Loren; Garcia Santos, Francislaine Anelize; Maruyama, Arnaldo Shindi; Medeiros de Carvalho Sousa, Liza Margareth; Unniappan, Suraj; Kowalewski, Mariusz P; de Carvalho Papa, Paula (2022). Insulin induces steroidogenesis in canine luteal cells via PI3K-MEK-MAPK. Molecular and Cellular Endocrinology, 540:111518.

Vallelian, Florence; Buzzi, Raphael M; Pfefferlé, Marc; Yalamanoglu, Ayla; Dubach, Irina L; Wassmer, Andreas; Gentinetta, Thomas; Hansen, Kerstin; Humar, Rok; Schulthess, Nadja; Schaer, Christian A; Schaer, Dominik J (2022). Heme-stress activated NRF2 skews fate trajectories of bone marrow cells from dendritic cells towards red pulp-like macrophages in hemolytic anemia. Cell Death and Differentiation:Epub ahead of print.

Coester, Bernd; Lutz, Thomas A; Le Foll, Christelle (2022). Mouse Microglial Calcitonin Receptor Knockout Impairs Hypothalamic Amylin Neuronal pSTAT3 Signaling but Lacks Major Metabolic Consequences. Metabolites, 12(1):51.

Bornstein, Stefan R; Voit-Bak, Karin; Donate, Timo; Rodionov, Roman N; Gainetdinov, Raul R; Tselmin, Sergey; Kanczkowski, Waldemar; Müller, Gregor M; Achleitner, Martin; Wang, Jun; Licinio, Julio; Bauer, Michael; Young, Allan H; Thuret, Sandrine; Bechmann, Nicole; Straube, Richard (2022). Chronic post-COVID-19 syndrome and chronic fatigue syndrome: Is there a role for extracorporeal apheresis? Molecular Psychiatry, 27(1):34-37.

Kiener, Sarah; Rostaher, Ana; Rüfenacht, Silvia; Jagannathan, Vidhya; Sundberg, John P; Welle, Monika; Leeb, Tosso (2022). Independent DSG4 frameshift variants in cats with hair shaft dystrophy. Molecular Genetics and Genomics, 297(1):147-154.

Faraone, Stephen V; Newcorn, Jeffrey H; Cipriani, Andrea; Brandeis, Daniel; Kaiser, Anna; Hohmann, Sarah; Haege, Alexander; Cortese, Samuele (2022). Placebo and nocebo responses in randomised, controlled trials of medications for ADHD: a systematic review and meta-analysis. Molecular Psychiatry, 27(1):212-219.

Spiri, Silvan; Berger, Simon; Mereu, Louisa; DeMello, Andrew; Hajnal, Alex (2022). Reciprocal EGFR signaling in the anchor cell ensures precise inter-organ connection during Caenorhabditis elegans vulval morphogenesis. Development, 149(1):Epub ahead of print.

Gegenschatz-Schmid, Katharina; Buzzi, Stefano; Grossmann, Jonas; Roschitzki, Bernd; Urbanet, Riccardo; Heuberger, Roman; Glück, Dorothea; Zucker, Arik; Ehrbar, Martin (2022). Reduced thrombogenicity of surface-treated Nitinol implants steered by altered protein adsorption. Acta Biomaterialia, 137:331-345.

Dasmeh, Pouria; Wagner, Andreas (2022). Yeast Proteins may Reversibly Aggregate like Amphiphilic Molecules. Journal of Molecular Biology, 434(2):167352.

Zosel, Franziska; Holla, Andrea; Schuler, Benjamin (2022). Labeling of Proteins for Single-Molecule Fluorescence Spectroscopy. In: Munoz, Victor. Protein Folding Methods and Protocols. New York: Springer, 207-233.

2021

Münz, Christian (2021). Co-Stimulatory Molecules during Immune Control of Epstein Barr Virus Infection. Biomolecules, 12:38.

Mason, L; Shic, F; Falck-Ytter, T; Chakrabarti, B; Charman, T; Loth, E; Tillmann, J; Banaschewski, T; Baron-Cohen, S; Bölte, S; Buitelaar, J; Durston, S; Oranje, B; Persico, A M; Beckmann, C; Bougeron, T; Dell'Acqua, F; Ecker, C; Moessnang, C; Murphy, D; Johnson, M H; Jones, E J H; LEAP Team; et al; Brandeis, Daniel (2021). Preference for biological motion is reduced in ASD: implications for clinical trials and the search for biomarkers. Molecular Autism, 12:74.

Tseilikman, Vadim; Komelkova, Maria; Kondashevskaya, Marina V; Manukhina, Eugenia; Downey, H Fred; Chereshnev, Valerii; Chereshneva, Margarita; Platkovskii, Pavel; Goryacheva, Anna; Pashkov, Anton; Fedotova, Julia; Tseilikman, Olga; Maltseva, Natalya; Cherkasova, Olga; Steenblock, Charlotte; Bornstein, Stefan R; Ettrich, Barbara; Chrousos, George P; Ullmann, Enrico (2021). A Rat Model of Post-Traumatic Stress Syndrome Causes Phenotype-Associated Morphological Changes and Hypofunction of the Adrenal Gland. International Journal of Molecular Sciences, 22(24):13235.

Hines, Timothy J; Tadenev, Abigail L D; Lone, Museer A; Hatton, Courtney L; Bagasrawala, Inseyah; Stum, Morgane G; Miers, Kathy E; Hornemann, Thorsten; Burgess, Robert W (2021). Precision mouse models of Yars/dominant intermediate Charcot-Marie-Tooth disease type C and Sptlc1/hereditary sensory and autonomic neuropathy type 1. Journal of Anatomy:Epub ahead of print.

De Rossi, Pierre; Lewis, Amanda J; Furrer, Johanna; De Vos, Laura; Demeter, Tomas; Zbinden, Aurélie; Zhong, Weijia; Wiersma, Vera I; Scialo, Carlo; Weber, Julien; Guo, Zhongning; Scaramuzza, Stefano; Di Fabrizio, Marta; Böing, Carolin; Castaño‐Díez, Daniel; Al‐Amoudi, Ashraf; Pérez‐Berlanga, Manuela; Lashley, Tammaryn; Stahlberg, Henning; Polymenidou, Magdalini (2021). FTLD‐TDP assemblies seed neoaggregates with subtype‐specific features via a prion‐like cascade. EMBO Reports, 22(12):e53877.

Zhang, Xiang; Schuhmachers, Patrick; Mourão, André; et al; Murer, Anita; Münz, Christian (2021). PLK1-dependent phosphorylation restrains EBNA2 activity and lymphomagenesis in EBV-infected mice. EMBO Reports, 22(12):e53007.

Panagopoulos, Andreas; Altmeyer, Matthias (2021). When the RAP (80) fades out, you can hear BRCA1 RING. EMBO Reports, 22(12):e54116.

Emmenegger, Marc; Kumar, Sreedhar Saseendran; Emmenegger, Vishalini; Malinauskas, Tomas; Buettner, Thomas; Rose, Laura; Schierack, Peter; Sprinzl, Martin F; Sommer, Clemens J; Lackner, Karl J; Aguzzi, Adriano; Roggenbuck, Dirk; Frauenknecht, Katrin B M (2021). Anti-prothrombin autoantibodies enriched after infection with SARS-CoV-2 and influenced by strength of antibody response against SARS-CoV-2 proteins. PLoS Pathogens, 17(12):e1010118.

Shchelik, Inga S; Molino, João V D; Gademann, Karl (2021). Biohybrid microswimmers against bacterial infections. Acta Biomaterialia, 136:99-110.

Zerbi, V; Pagani, M; Markicevic, M; Matteoli, M; Pozzi, D; Fagiolini, M; Bozzi, Y; Galbusera, A; Scattoni, M L; Provenzano, G; Banerjee, A; Helmchen, F; Basson, M A; Ellegood, J; Lerch, J P; Rudin, M; Gozzi, A; Wenderoth, N (2021). Brain mapping across 16 autism mouse models reveals a spectrum of functional connectivity subtypes. Molecular Psychiatry, 26(12):7610-7620.

Gerber, Reto; Robinson, Mark D (2021). Censcyt: censored covariates in differential abundance analysis in cytometry. BMC Bioinformatics, 22(1):235.

Le Verger, Kévin; González Ruiz, Laureano R; Billet, Guillaume (2021). Comparative anatomy and phylogenetic contribution of intracranial osseous canals and cavities in armadillos and glyptodonts (Xenarthra, Cingulata). Journal of Anatomy, 239(6):1473-1502.

Sobottka, Bettina; Nowak, Marta; Frei, Anja Laura; Haberecker, Martina; Merki, Samuel; Tumor Profiler Consortium; Levesque, Mitchell P; Dummer, Reinhard; Moch, Holger; Koelzer, Viktor Hendrik (2021). Correction: Establishing standardized immune phenotyping of metastatic melanoma by digital pathology. Laboratory investigation, 101(12):1637.

Mathis, Déborah; Sass, Jörn Oliver; Graubner, Claudia; Schoster, Angelika (2021). Diagnosis of atypical myopathy based on organic acid and acylcarnitine profiles and evolution of biomarkers in surviving horses. Molecular Genetics and Metabolism Reports, 29:100827.

Sobottka, Bettina; Nowak, Marta; Frei, Anja Laura; Haberecker, Martina; Merki, Samuel; Dummer, Reinhard; Levesque, Mitchell P; Moch, Holger; Koelzer, Viktor Hendrik (2021). Establishing standardized immune phenotyping of metastatic melanoma by digital pathology. Laboratory investigation, 101(12):1561-1570.

Boehi, Flurina; Manetsch, Patrick; Hottiger, Michael O (2021). Interplay between ADP-ribosyltransferases and essential cell signaling pathways controls cellular responses. Cell Discovery, 7(1):104.

de Marco Zompit, Mara; Stucki, Manuel (2021). Mechanisms of genome stability maintenance during cell division. DNA repair, 108:103215.

Aboouf, Mostafa A; Armbruster, Julia; Thiersch, Markus; Gassmann, Max; Gödecke, Axel; Gnaiger, Erich; Kristiansen, Glen; Bicker, Anne; Hankeln, Thomas; Zhu, Hao; Gorr, Thomas A (2021). Myoglobin, expressed in brown adipose tissue of mice, regulates the content and activity of mitochondria and lipid droplets. Biochimica and Biophysica Acta. Molecular and Cell Biology of Lipids, 1866(12):159026.

Bernardo-Faura, Marti; Rinas, Melanie; Wirbel, Jakob; Pertsovskaya, Inna; Pliaka, Vicky; Messinis, Dimitris E; Vila, Gemma; Sakellaropoulos, Theodore; Faigle, Wolfgang; Stridh, Pernilla; Behrens, Janina R; Olsson, Tomas; Martin, Roland; Paul, Friedemann; Alexopoulos, Leonidas G; Villoslada, Pablo; Saez-Rodriguez, Julio (2021). Prediction of combination therapies based on topological modeling of the immune signaling network in multiple sclerosis. Genome Medicine, 13:117.

Greber, Urs F (2021). Two years into COVID-19 – Lessons in SARS-CoV-2 and a perspective from papers in FEBS Letters. FEBS letters, 595(23):2847-2853.

Brulefert, Adrien; Kraemer, Melanie; Cumin, Marie; Selle, Amandine; Hoste, Astrid; Gad, Hans-Henrik; Rühl, Julia; Madinier, Jean-Baptiste; Chaloin, Olivier; Münz, Christian; Desprès, Philippe; Mueller, Christopher George; Flacher, Vincent (2021). Chikungunya Virus Envelope Protein E2 Provides a Vector for Targeted Antigen Delivery to Human Dermal CD14+ Dendritic Cells. Journal of Investigative Dermatology, 141(12):2985-2989.e5.

Münz, Christian (2021). Non-canonical functions of autophagy proteins in immunity and infection. Molecular Aspects of Medicine, 82:100987.

Pape, Thorben; Hunkemöller, Anna Maria; Kümpers, Philipp; Haller, Hermann; David, Sascha; Stahl, Klaus (2021). Targeting the "sweet spot" in septic shock - A perspective on the endothelial glycocalyx regulating proteins Heparanase-1 and -2. Matrix Biology Plus, 12:100095.

Neuber, Sebastian; Emmert, Maximilian Y; Nazari-Shafti, Timo Z (2021). Hopes and Hurdles of Employing Mesenchymal Stromal Cells in the Treatment of Cardiac Fibrosis. International Journal of Molecular Sciences, 22(23):13000.

Meier-Schiesser, Barbara; Mellett, Mark; Ramirez-Fort, Marigdalia K; Maul, Julia-Tatjana; Klug, Annika; Winkelbeiner, Nicola; Fenini, Gabriele; Schafer, Peter; Contassot, Emmanuel; French, Lars E (2021). Phosphodiesterase-4 Inhibition Reduces Cutaneous Inflammation and IL-1β Expression in a Psoriasiform Mouse Model but Does Not Inhibit Inflammasome Activation. International Journal of Molecular Sciences, 22(23):12878.

Strekalova, Tatyana; Veniaminova, Ekaterina; Svirin, Evgeniy; Kopeikina, Ekaterina; Veremeyko, Tatyana; Yung, Amanda W Y; Proshin, Andrey; Tan, Shawn Zheng Kai; Khairuddin, Sharafuddin; Lim, Lee Wei; Lesch, Klaus-Peter; Walitza, Susanne; Anthony, Daniel C; Ponomarev, Eugene D (2021). Sex-Specific ADHD-like Behaviour, Altered Metabolic Functions, and Altered EEG Activity in Sialyltransferase ST3GAL5-Deficient Mice. Biomolecules, 11(12):1759.

Wang, Ting; Wang, Zheng; de Fabritus, Lauriane; Tao, Jinglian; Saied, Essa M; Lee, Ho-Joon; Ramazanov, Bulat R; Jackson, Benjamin; Burkhardt, Daniel; Parker, Mikhail; Gleinich, Anne S; Wang, Zhirui; Seo, Dong Eun; Zhou, Ting; Xu, Shihao; Alecu, Irina; Azadi, Parastoo; Arenz, Christoph; Hornemann, Thorsten; Krishnaswamy, Smita; van de Pavert, Serge A; Kaech, Susan M; Ivanova, Natalia B; Santori, Fabio R (2021). 1-deoxysphingolipids bind to COUP-TF to modulate lymphatic and cardiac cell development. Developmental Cell, 56(22):3128-3145.e15.

Marconi, Guya Diletta; Porcheri, Cristina; Trubiani, Oriana; Mitsiadis, Thimios A (2021). Three-Dimensional Culture Systems for Dissecting Notch Signalling in Health and Disease. International Journal of Molecular Sciences, 22(22):12473.

Glasauer, Stella M K; Triemer, Therese; Neef, Anne B; Neuhauss, Stephan C F; Luedtke, Nathan W (2021). DNA template strand segregation in developing zebrafish. Cell Chemical Biology, 28(11):1638-1647.e4.

Liu, Sanxiong; Aldinger, Kimberly A; Cheng, Chi Vicky; Kiyama, Takae; Dave, Mitali; McNamara, Hanna K; Zhao, Wukui; Stafford, James M; Descostes, Nicolas; Lee, Pedro; Caraffi, Stefano G; Ivanovski, Ivan; Errichiello, Edoardo; Zweier, Christiane; Zuffardi, Orsetta; Schneider, Michael; Papavasiliou, Antigone S; Perry, M Scott; Humberson, Jennifer; Cho, Megan T; Weber, Astrid; Swale, Andrew; Badea, Tudor C; Mao, Chai-An; Garavelli, Livia; Dobyns, William B; Reinberg, Danny (2021). NRF1 association with AUTS2-Polycomb mediates specific gene activation in the brain. Molecular Cell, 81(22):4757.

Peña‐Hernández, Rodrigo; Aprigliano, Rossana; Carina Frommel, Sandra; Pietrzak, Karolina; Steiger, Seraina; Roganowicz, Marcin; Lerra, Luigi; Bizzarro, Juliana; Santoro, Raffaella (2021). BAZ2A‐mediated repression via H3K14ac‐marked enhancers promotes prostate cancer stem cells. EMBO Reports, 22(11):e53014.

Srimat Kandadai, Keertana; Kotur, Monika B; Dokalis, Nikolaos; Amrein, Irmgard; Keller, Christian W; Münz, Christian; Wolfer, David; Prinz, Marco; Lünemann, Jan D (2021). ATG5 in microglia does not contribute vitally to autoimmune neuroinflammation in mice. Autophagy, 17(11):3566-3576.

Hirota, Shun K; Yasumoto, Akiko A; Nitta, Kozue; Tagane, Misa; Miki, Nozomu; Suyama, Yoshihisa; Yahara, Tetsukazu (2021). Evolutionary history of Hemerocallis in Japan inferred from chloroplast and nuclear phylogenies and levels of interspecific gene flow. Molecular Phylogenetics and Evolution, 164:107264.

Luciani, Alessandro; Denley, Matthew C S; Govers, Larissa P; Sorrentino, Vincenzo; Froese, D Sean (2021). Mitochondrial disease, mitophagy, and cellular distress in methylmalonic acidemia. Cellular and Molecular Life Sciences, 78(21-22):6851-6867.

Deán‐Ben, Xosé Luís; Razansky, Daniel (2021). Optoacoustic imaging of the skin. Experimental Dermatology, 30(11):1598-1609.

Zheng, Jia; Guo, Ning; Wagner, Andreas (2021). Mistranslation Reduces Mutation Load in Evolving Proteins through Negative Epistasis with DNA Mutations. Molecular Biology and Evolution, 38(11):4792-4804.

Heinzer, Daniel; Avar, Merve; Pease, Daniel Patrick; Dhingra, Ashutosh; Yin, Jiang-An; Schaper, Elke; Doğançay, Berre; Emmenegger, Marc; Spinelli, Anna; Maggi, Kevin; Chincisan, Andra; Mead, Simon; Hornemann, Simone; Heutink, Peter; Aguzzi, Adriano (2021). Novel regulators of PrPC biosynthesis revealed by genome-wide RNA interference. PLoS Pathogens, 17(10):e1010013.

Balakrishna, Suraj; Salazar-Vizcaya, Luisa; Schmidt, Axel J; Kachalov, Viacheslav; Kusejko, Katharina; Thurnheer, Maria Christine; Roth, Jan A; Nicca, Dunja; Cavassini, Matthias; Battegay, Manuel; Schmid, Patrick; Bernasconi, Enos; Günthard, Huldrych F; Rauch, Andri; Kouyos, Roger D; Swiss HIV Cohort Study (2021). Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: A modelling study. PLoS Computational Biology, 17(10):e1009529.

Flores Ramos, Stephany; Brugger, Silvio D; Escapa, Isabel Fernandez; Skeete, Chelsey A; Cotton, Sean L; Eslami, Sara M; Gao, Wei; Bomar, Lindsey; Tran, Tommy H; Jones, Dakota S; Minot, Samuel; Roberts, Richard J; Johnston, Christopher D; Lemon, Katherine P (2021). Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome. mSystems, 6(5):e0042521.

Storti, Gabriele; Favi, Evaldo; Albanesi, Francesca; Kim, Bong-Sung; Cervelli, Valerio (2021). Adipose-Derived Stem/Stromal Cells in Kidney Transplantation: Status Quo and Future Perspectives. International Journal of Molecular Sciences, 22(20):11188.

Divari, Sara; Danelli, Marta; Pregel, Paola; Ghielmetti, Giovanni; Borel, Nicole; Bollo, Enrico (2021). Biomolecular investigation of Bartonella spp. in wild rodents of two Swiss regions. Pathogens, 10(10):1331.

Klemmer, Viviane A; Khera, Nupur; Siegenthaler, Barbara M; Bhattacharya, Indranil; Weber, Franz E; Ghayor, Chafik (2021). Effect of N-Vinyl-2-Pyrrolidone (NVP), a Bromodomain-Binding Small Chemical, on Osteoblast and Osteoclast Differentiation and Its Potential Application for Bone Regeneration. International Journal of Molecular Sciences, 22(20):11052.

Zalcman, Nomi; Gutreiman, Mijal; Shahar, Tal; Weller, Michael; Lavon, Iris (2021). Androgen Receptor Activation in Glioblastoma Can Be Achieved by Ligand-Independent Signaling through EGFR-A Potential Therapeutic Target. International Journal of Molecular Sciences, 22(20):10954.

Börold, Jacob; Eletto, Davide; Busnadiego, Idoia; Mair, Nina K; Moritz, Eva; Schiefer, Samira; Schmidt, Nora; Petric, Philipp P; Wong, W Wei-Lynn; Schwemmle, Martin; Hale, Benjamin G (2021). BRD9 is a druggable component of interferon-stimulated gene expression and antiviral activity. EMBO Reports, 22(10):e52823.

Haas, Dorothea; Hauke, Jana; Schwarz, Kathrin V; Consalvi, Lucia; Trefz, Friedrich K; Blau, Nenad; Hoffmann, Georg F; Burgard, Peter; Garbade, Sven F; Okun, Jürgen G (2021). Differences of Phenylalanine Concentrations in Dried Blood Spots and in Plasma: Erythrocytes as a Neglected Component for This Observation. Metabolites, 11(10):680.

Kiessling, Eva; Nötzli, Sarah; Todorova, Vyara; Forny, Merima; Baumgartner, Matthias R; Samardzija, Marijana; Krijt, Jakub; Kožich, Viktor; Grimm, Christian; Froese, D Sean (2021). Absence of MMACHC in peripheral retinal cells does not lead to an ocular phenotype in mice. Biochimica et Biophysica Acta. Molecular Basis of Disease, 1867(10):166201.

Säle, Verena; Palenzuela, Javier; Azcón-Aguilar, Concepción; Sánchez-Castro, Iván; da Silva, Gladstone Alves; Seitz, Benjamin; Sieverding, Ewald; van der Heijden, Marcel G A; Oehl, Fritz (2021). Ancient lineages of arbuscular mycorrhizal fungi provide little plant benefit. Mycorrhiza, 31(5):559-576.

Klionsky, Daniel J; Petroni, Giulia; Amaravadi, Ravi K; et al; Münz, Christian (2021). Autophagy in major human diseases. EMBO Journal Online, 40(19):e108863.

Zimoch, Jakub; Zielinska, Dominika; Michalak-Micka, Katarzyna; Rütsche, Dominic; Böni, Roland; Biedermann, Thomas; Klar, Agnes S (2021). Bio-engineering a prevascularized human tri-layered skin substitute containing a hypodermis. Acta Biomaterialia, 134:215-227.

Birch, Joanne L; Kocyan, Alexander (2021). Biogeography of the monocotyledon astelioid clade (Asparagales): A history of long-distance dispersal and diversification with emerging habitats. Molecular Phylogenetics and Evolution, 163:107203.

Spegg, Vincent; Altmeyer, Matthias (2021). Biomolecular condensates at sites of DNA damage: More than just a phase. DNA repair, 106:103179.

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Ahlfeld, Tilman; Lode, Anja; Richter, Richard Frank; Pradel, Winnie; Franke, Adrian; Rauner, Martina; Stadlinger, Bernd; Lauer, Günter; Gelinsky, Michael; Korn, Paula (2021). Toward Biofabrication of Resorbable Implants Consisting of a Calcium Phosphate Cement and Fibrin-A Characterization In Vitro and In Vivo. International Journal of Molecular Sciences, 22(3):1218.

Devrim-Lanpir, Aslı; Hill, Lee; Knechtle, Beat (2021). How N-Acetylcysteine Supplementation Affects Redox Regulation, Especially at Mitohormesis and Sarcohormesis Level: Current Perspective. Antioxidants, 10(2):153.

Fiedorowicz, Michal; Choragiewicz, Tomasz; Turski, Waldemar A; Kocki, Tomasz; Nowakowska, Dominika; Wertejuk, Kamila; Kamińska, Agnieszka; Avitabile, Teresio; Wełniak-Kaminska, Marlena; Grieb, Pawel; Zweifel, Sandrine; Rejdak, Robert; Toro, Mario Damiano (2021). Tryptophan Pathway Abnormalities in a Murine Model of Hereditary Glaucoma. International Journal of Molecular Sciences, 22(3):1039.

Posada-Céspedes, Susana; Seifert, David; Topolsky, Ivan; Jablonski, Kim Philipp; Metzner, Karin J; Beerenwinkel, Niko (2021). V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data. Bioinformatics, 37(12):1673-1680.

Almiñana, Carmen; Rudolf Vegas, Alba; Tekin, Muhittin; Hassan, Mubbashar; Uzbekov, Rustem; Fröhlich, Thomas; Bollwein, Heiner; Bauersachs, Stefan (2021). Isolation and characterization of equine uterine extracellular vesicles: a comparative methodological study. International Journal of Molecular Sciences, 22(2):979.

Mukherjee, Debanjan; Wagh, Ganesh; Mokalled, Mayssa H; Kontarakis, Zacharias; Dickson, Amy L; Rayrikar, Amey; Günther, Stefan; Poss, Kenneth D; Stainier, Didier Y R; Patra, Chinmoy (2021). Ccn2a is an injury-induced matricellular factor that promotes cardiac regeneration in zebrafish. Development, 148(2):dev193219.

Conde, Javier; Schwarzfischer, Marlene; Katkeviciute, Egle; Häfliger, Janine; Niechcial, Anna; Brillant, Nathalie; Manzini, Roberto; Bäbler, Katharina; Atrott, Kirstin; Lang, Silvia; Scharl, Michael (2021). Titanium Dioxide Presents a Different Profile in Dextran Sodium Sulphate-Induced Experimental Colitis in Mice Lacking the IBD Risk Gene Ptpn2 in Myeloid Cells. International Journal of Molecular Sciences, 22(2):772.

Tusup, Marina; Cheng, Phil F; Picardi, Ernesto; Raziunaite, Austeja; Dummer, Reinhard; Levesque, Mitchell P; French, Lars E; Guenova, Emmanuella; Kundig, Thomas M; Pascolo, Steve (2021). Evaluation of the Interplay between the ADAR Editome and Immunotherapy in Melanoma. Non-Coding RNA, 7:5.

Bierbaumer, Lisa; Katschnig, Anna M; Radic-Sarikas, Branka; Kauer, Maximilian O; Petro, Jeffrey A; Högler, Sandra; Gurnhofer, Elisabeth; Pedot, Gloria; Schäfer, Beat W; Schwentner, Raphaela; Mühlbacher, Karin; Kromp, Florian; Aryee, Dave N T; Kenner, Lukas; Uren, Aykut; Kovar, Heinrich (2021). YAP/TAZ inhibition reduces metastatic potential of Ewing sarcoma cells. Oncogenesis, 10:2.

Kubacki, Jakub; Hardmeier, Isabelle; Qi, Weihong; Flacio, Eleonora; Tonolla, Mauro; Fraefel, Cornel (2021). Complete genome sequence of a Rhabdovirus strain from culex mosquitos collected in Southern Switzerland. Microbiology Resource Announcements, 10(1):e01234-20.

Goba, Inguna; Goricanec, David; Schum, Dominik; Hillenbrand, Matthias; Plückthun, Andreas; Hagn, Franz (2021). Probing the Conformation States of Neurotensin Receptor 1 Variants by NMR Site-Directed Methyl Labeling. Chembiochem, 22(1):139-146.

Teale, William D; Pasternak, Taras; Dal Bosco, Cristina; Dovzhenko, Alexander; Kratzat, Krystyna; Bildl, Wolfgang; Schwörer, Manuel; Falk, Thorsten; Ruperti, Benadetto; Schaefer, Jonas V; Shahriari, Mojgan; Pilgermayer, Lena; Li, Xugang; Lübben, Florian; Plückthun, Andreas; Schulte, Uwe; Palme, Klaus (2021). Flavonol-mediated stabilization of PIN efflux complexes regulates polar auxin transport. EMBO Journal Online, 40:e104416.

Moura, Rita; Borges, Margarida; Vila Pouca, Maria C P; Oliveira, Dulce A; Parente, Marco P L; Kimmich, Nina; Mascarenhas, Teresa; Natal, Renato M (2021). A numerical study on fetal head molding during labor. International Journal for Numerical Methods in Biomedical Engineering, 37(1):e3411.

Sticco, Matthew J; Peña Palomino, Perla A; Lukacsovich, David; Thompson, Brianna L; Földy, Csaba; Ressl, Susanne; Martinelli, David C (2021). C1QL3 promotes cell‐cell adhesion by mediating complex formation between ADGRB3/BAI3 and neuronal pentraxins. FASEB Journal, 35(1):e21194.

Brown, Steven A; Sinues, Pablo (2021). Circadian Metabolomics from Breath. In: Brown, Steven A. Circadian Clocks : Methods and Protocols. New York: Springer, 149-156.

Zabulica, Mihaela; Srinivasan, Raghuraman C; Akcakaya, Pinar; Allegri, Gabriella; Bestas, Burcu; Firth, Mike; Hammarstedt, Christina; Jakobsson, Tomas; Jakobsson, Towe; Ellis, Ewa; Jorns, Carl; Makris, Georgios; Scherer, Tanja; Rimann, Nicole; van Zuydam, Natalie R; Gramignoli, Roberto; Forslöw, Anna; Engberg, Susanna; Maresca, Marcello; Rooyackers, Olav; Thöny, Beat; Häberle, Johannes; Rosen, Barry; Strom, Stephen C (2021). Correction of a urea cycle defect after ex vivo gene editing of human hepatocytes. Molecular Therapy, 29(5):1903-1917.

Tayyrov, Annageldi; Schnetzler, Michèle; Gillis-Germitsch, Nina; Schnyder, Manuela (2021). Genetic diversity of the cardiopulmonary canid nematode Angiostrongylus vasorum within and between rural and urban fox populations. Infection, Genetics and Evolution, 87:104618.

Mathew, Corina; Weiß, R Gregor; Giese, Christoph; Lin, Chia-wei; Losfeld, Marie-Estelle; Glockshuber, Rudi; Riniker, Sereina; Aebi, Markus (2021). Glycan–protein interactions determine kinetics of N-glycan remodeling. RSC Chemical Biology, 2(3):917-931.

Thieme, Michael; Roulin, Anne C (2021). Identification of Active Transposable Elements in Plants: The Mobilome-Seq Approach. In: Cho, Jungnam. Plant Transposable Elements. New York: Springer, 95-102.

Hopp, Ann-Katrin; Hottiger, Michael O (2021). Investigation of Mitochondrial Via Immunofluorescence. In: Weissig, V; Edeas, M. Mitochondiral Medicine. New York: Springer, 165-171.

Du, Ngoc-Hien; Brown, Steven A (2021). Measuring Circadian Rhythms in Human Cells. In: Brown, Steven A. Circadian Clocks : Methods and Protocols. New York: Springer, 53-67.

Hopp, Ann-Katrin; Teloni, Federico; Bisceglie, Lavinia; Gondrand, Corentin; Raith, Fabio; Nowak, Kathrin; Muskalla, Lukas; Howald, Anna; Pedrioli, Patrick G A; Johnsson, Kai; Altmeyer, Matthias; Pedrioli, Deena M Leslie; Hottiger, Michael O (2021). Mitochondrial NAD+ Controls Nuclear ARTD1-Induced ADP-Ribosylation. Molecular Cell, 81(2):340-354.e5.

Hernando, Nati; Gagnon, Kenneth; Lederer, Eleanor (2021). Phosphate Transport in Epithelial and Nonepithelial Tissue. Physiological reviews, 101(1):1-35.

Eyring, Jillianne; Lin, Chia-Wei; Ngwa, Elsy Mankah; Boilevin, Jérémy; Pesciullesi, Giorgio; Locher, Kaspar P; Darbre, Tamis; Reymond, Jean-Louis; Aebi, Markus (2021). Substrate specificities and reaction kinetics of the yeast oligosaccharyltransferase isoforms. Journal of Biological Chemistry, 296:100809.

Gysin, Tina; Kowalewski, Mariusz P (2021). The involvement of hypoxia-inducible factor 1α (HIF1α)-stabilising factors in steroidogenic acute regulatory (STAR) protein-dependent steroidogenesis in murine KK1 granulosa cells in vitro. Reproduction, Fertility and Development, 33(18):865-880.

Carlantoni, Claudia; Allanki, Srinivas; Kontarakis, Zacharias; Rossi, Andrea; Piesker, Janett; Günther, Stefan; Stainier, Didier Y R (2021). Tie1 regulates zebrafish cardiac morphogenesis through Tolloid-like 1 expression. Developmental Biology, 469:54-67.

Skaria, Tom; Wälchli, Thomas; Vogel, Johannes (2021). CGRP receptor antagonism in COVID-19: potential cardiopulmonary adverse effects. Trends in Molecular Medicine, 27(1):7-10.

Jahn, Tabea; Clark, Christopher; Kerksiek, Anja; Lewczuk, Piotr; Lütjohann, Dieter; Popp, Julius (2021). Cholesterol metabolites and plant sterols in cerebrospinal fluid are associated with Alzheimer's cerebral pathology and clinical disease progression. Journal of Steroid Biochemistry and Molecular Biology, 205:105785.

Klionsky, Daniel J; Abdel-Aziz, Amal Kamal; Abdelfatah, Sara; et al; Bornhauser, Beat (2021). Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1. Autophagy, 17(1):1-382.

Werdermann, Martin; Berger, Ilona; Scriba, Laura D; Santambrogio, Alice; Schlinkert, Pia; Brendel, Heike; Morawietz, Henning; Schedl, Andreas; Peitzsch, Mirko; King, Aileen J F; Andoniadou, Cynthia L; Bornstein, Stefan R; Steenblock, Charlotte (2021). Insulin and obesity transform hypothalamic-pituitary-adrenal axis stemness and function in a hyperactive state. Molecular Metabolism, 43:101112.

Pánisová, Elena; Unger, Wendy W J; Berger, Christoph; Meyer Sauteur, Patrick M (2021). Mycoplasma pneumoniae-Specific IFN-γ-Producing CD4 Effector-Memory T Cells Correlate with Pulmonary Disease. American Journal of Respiratory Cell and Molecular Biology, 64(1):143-146.

Mun, YeVin; Nombela-Arrieta, César (2021). 3D Microscopy of Murine Bone Marrow Hematopoietic Tissues. Methods in Molecular Biology, 2308:127-138.

Stritt, Christoph; Roulin, Anne C (2021). Detecting Signatures of TE Polymorphisms in Short-Read Sequencing Data. In: Cho, Jungnam. Plant transposable elements. New York: Springer, 177-187.

Cervantes-Gracia, Karla; Chahwan, Richard; Husi, Holger (2021). Integrative Analysis of Incongruous Cancer Genomics and Proteomics Datasets. Methods in Molecular Biology, 2361:291-305.

Karakulak, Tülay; Moch, Holger; von Mering, Christian; Kahraman, Abdullah (2021). Probing Isoform Switching Events in Various Cancer Types: Lessons From Pan-Cancer Studies. Frontiers in Molecular Biosciences, 8:726902.

2020

Amaral, Ana R; Chanfana, Cátia; Smith, Brian D; Mansur, Rubaiyat; Collins, Tim; Baldwin, Robert; Minton, Gianna; Parra, Guido J; Krützen, Michael; Jefferson, Thomas A; Karczmarski, Leszek; Guissamulo, Almeida; Brownell, Robert L; Rosenbaum, Howard C (2020). Genomics of Population Differentiation in Humpback Dolphins, Sousa spp. in the Indo-Pacific Ocean. Journal of Heredity, 111(7):652-660.

Saikia, Eashan; Läubli, Nino F; Burri, Jan T; Rüggeberg, Markus; Schlepütz, Christian M; Vogler, Hannes; Burgert, Ingo; Herrmann, Hans J; Nelson, Bradley J; Grossniklaus, Ueli; Wittel, Falk K (2020). Kinematics governing mechanotransduction in the sensory hair of the Venus flytrap. International Journal of Molecular Sciences, 22:280.

Stark, Stefan G; Ficek, Joanna; Locatello, Francesco; Bonilla, Ximena; Chevrier, Stéphane; Singer, Franziska; Tumor Profiler Consortium; Rätsch, Gunnar; Lehmann, Kjong-Van (2020). SCIM: universal single-cell matching with unpaired feature sets. Bioinformatics, 36(Supp.):i919-i927.

Bischoff, Nicolaj S; de Kok, Theo M; Sijm, Dick T H M; van Breda, Simone G; Briedé, Jacco J; Castenmiller, Jacqueline J M; Opperhuizen, Antoon; Chirino, Yolanda I; Dirven, Hubert; Gott, David; Houdeau, Eric; Oomen, Agnes G; Poulsen, Morten; Rogler, Gerhard; van Loveren, Henk (2020). Possible Adverse Effects of Food Additive E171 (Titanium Dioxide) Related to Particle Specific Human Toxicity, Including the Immune System. International Journal of Molecular Sciences, 22:207.

Estrada Brull, Anna; Rost, Felix; Oderbolz, Josua; Kirchner, Florian R; Leibundgut-Landmann, Salomé; Oxenius, Annette; Joller, Nicole (2020). CD85k Contributes to Regulatory T Cell Function in Chronic Viral Infections. International Journal of Molecular Sciences, 22(1):31.

Kandaswamy, Dinesh Kumar; Prakash, Makarla Venkata Sathya; Graw, Jochen; Koller, Samuel; Magyar, István; Tiwari, Amit; Berger, Wolfgang; Santhiya, Sathiyaveedu Thyagarajan (2020). Application of WES Towards Molecular Investigation of Congenital Cataracts: Identification of Novel Alleles and Genes in a Hospital-Based Cohort of South India. International Journal of Molecular Sciences, 21(24):9569.

Cheng, Donghang; Gao, Guozhen; Di Lorenzo, Alessandra; Jayne, Sandrine; Hottiger, Michael O; Richard, Stephane; Bedford, Mark T (2020). Genetic evidence for partial redundancy between the arginine methyltransferases CARM1 and PRMT6. Journal of Biological Chemistry, 295(50):17060-17070.

Huemer, Markus; Mairpady Shambat, Srikanth; Brugger, Silvio D; Zinkernagel, Annelies S (2020). Antibiotic resistance and persistence—Implications for human health and treatment perspectives. EMBO Reports, 21(12):0.

Dalcher, Damian; Tan, Jennifer Yihong; Bersaglieri, Cristiana; Peña-Hernández, Rodrigo; Vollenweider, Eva; Zeyen, Stefan; Schmid, Marc W; Bianchi, Valerio; Butz, Stefan; Roganowicz, Marcin; Kuzyakiv, Rostyslav; Baubec, Tuncay; Marques, Ana Claudia; Santoro, Raffaella (2020). BAZ2A safeguards genome architecture of ground-state pluripotent stem cells. EMBO Journal Online, 39(23):e105606.

Tillmann, J; Uljarevic, M; Crawley, D; Dumas, G; Loth, E; Murphy, D; Buitelaar, J; Charman, T (2020). Dissecting the phenotypic heterogeneity in sensory features in autism spectrum disorder: a factor mixture modelling approach. Molecular Autism, 11(1):67.

Zughdani, Mhmuod; Yusufoğlu, Hasan Soliman; Ekiz, Güner; Linden, Anthony; Çalış, İhsan (2020). Ecdysteroids from the underground parts of Rhaponticum acaule (L.) DC. Phytochemistry, 180:112530.

Antoine, Daniel James; Williams, Dominic P; Kipar, Anja; Laverty, Hugh; Park, B Kevin (2020). Expression of Concern to: Diet restriction inhibits apoptosis and HMGB1 oxidation and promotes inflammatory cell recruitment during acetaminophen hepatoxicity. Molecular Medicine, 26:13.

van Steenwyk, Gretchen; Gapp, Katharina; Jawaid, Ali; Germain, Pierre‐Luc; Manuella, Francesca; Tanwar, Deepak K; Zamboni, Nicola; Gaur, Niharika; Efimova, Anastasiia; Thumfart, Kristina M; Miska, Eric A; Mansuy, Isabelle M (2020). Involvement of circulating factors in the transmission of paternal experiences through the germline. EMBO Journal Online, 39:e104579.

Antoine, Daniel James; Williams, Dominic P; Kipar, Anja; Laverty, Hugh; Park, B Kevin (2020). Retraction Note: Diet restriction inhibits apoptosis and HMGB1 oxidation and promotes inflammatory cell recruitment during acetaminophen hepatotoxicity. Molecular Medicine, 26(1):130.

Thomas, Christoph; Aller, Stephen G; Beis, Konstantinos; Carpenter, Elisabeth P; et al; Martinoia, Enrico (2020). Structural and functional diversity calls for a new classification of ABC transporters. FEBS letters, 594(23):3767-3775.

Bertok, Tomas; Jane, Eduard; Chrenekova, Nikola; Hroncekova, Stefania; Bertokova, Aniko; Hires, Michal; Vikartovska, Alica; Kubanikova, Petra; Sokol, Roman; Fillo, Juraj; Kasak, Peter; Borsig, Lubor; Tkac, Jan (2020). Analysis of serum glycome by lectin microarrays for prostate cancer patients - a search for aberrant glycoforms. Glycoconjugate journal, 37(6):703-711.

Caduff, Nicole; McHugh, Donal; Murer, Anita; Rämer, Patrick; Raykova, Ana; Landtwing, Vanessa; Rieble, Lisa; Keller, Christian W; Prummer, Michael; Hoffmann, Laurent; Lam, Janice K P; Chiang, Alan K S; Raulf, Friedrich; Azzi, Tarik; Berger, Christoph; Rubic-Schneider, Tina; Traggiai, Elisabetta; Lünemann, Jan D; Kammüller, Michael; Münz, Christian (2020). Correction: Immunosuppressive FK506 treatment leads to more frequent EBV-associated lymphoproliferative disease in humanized mice. PLoS Pathogens, 16(12):e1009167.

San Roman, Magdalena; Wagner, Andreas (2020). Acetate and glycerol are not uniquely suited for the evolution of cross-feeding in E. coli. PLoS Computational Biology, 16(11):e1008433.

Brugger, Daniel; Hanauer, Martin; Ortner, Johanna; Windisch, Wilhelm M (2020). The response of zinc transporter gene expression of selected tissues in a pig model of subclinical zinc deficiency. Journal of Nutritional Biochemistry, 90:108576.

Courtoy, Guillaume E; Leclercq, Isabelle; Froidure, Antoine; Schiano, Guglielmo; Morelle, Johann; Devuyst, Olivier; Huaux, François; Bouzin, Caroline (2020). Digital Image Analysis of Picrosirius Red Staining: A Robust Method for Multi-Organ Fibrosis Quantification and Characterization. Biomolecules, 10(11):1585.

Bordignon, Enrica; Seeger, Markus A; Galazzo, Laura; Meier, Gianmarco (2020). From in vitro towards in situ: structure-based investigation of ABC exporters by electron paramagnetic resonance spectroscopy. FEBS letters, 594:3839-3856.

Jaguva Vasudevan, Ananda Ayyappan; Balakrishnan, Kannan; Gertzen, Christoph G W; Borvető, Fanni; Zhang, Zeli; Sangwiman, Anucha; Held, Ulrike; Küstermann, Caroline; Banerjee, Sharmistha; Schumann, Gerald G; Häussinger, Dieter; Bravo, Ignacio G; Gohlke, Holger; Münk, Carsten (2020). Loop 1 of APOBEC3C Regulates its Antiviral Activity against HIV-1. Journal of Molecular Biology, 432(23):6200-6227.

Khayat, Maayan; Deri, Shani; Wolf, David; Trigano, Tom; Medalia, Ohad; Ben-Harush, Kfir (2020). Biomimetic nuclear lamin fibers with remarkable toughness and stiffness. International journal of biological macromolecules, 163:2060-2067.

Niu, Yiying; Yang, Lingguang; Gao, Teng; Dong, Changpeng; Zhang, Buyu; Yin, Peipei; Hopp, Ann-Katrin; Li, Dongdong; Gan, Rui; Wang, Hongou; Liu, Xi; Cao, Xueli; Xie, Yongchao; Meng, Xianbin; Deng, Haiteng; Zhang, Xiaohui; Ren, Jie; Hottiger, Michael O; Chen, Zeliang; Zhang, Yi; Liu, Xiaoyun; Feng, Yue (2020). A Type I-F Anti-CRISPR Protein Inhibits the CRISPR-Cas Surveillance Complex by ADP-Ribosylation. Molecular Cell, 80(3):512-524.e5.

Wambui, Joseph; Cernela, Nicole; Stevens, Marc J A; Ghielmetti, Giovanni; Stephan, Roger (2020). Draft genome sequences of two clostridium algidicarnis strains isolated from meat juice samples of chilled vacuum-packed lamb meat. Microbiology Resource Announcements, 9(45):e00983-20.

Rupp, Niels J; Moch, Holger (2020). ALK-rearranged renal cell carcinoma-different morphological faces of a rare tumor : Editorial to Hang et al.: ALK-rearranged renal cell carcinoma with a novel PLEKHA7-ALK translocation and metanephric adenoma-like morphology. Virchows Archiv, 477(5):759-760.

Patriarchi, Tommaso; Mohebi, Ali; Sun, Junqing; Marley, Aaron; Liang, Ruqiang; Dong, Chunyang; Puhger, Kyle; Mizuno, Grace Or; Davis, Carolyn M; Wiltgen, Brian; von Zastrow, Mark; Berke, Joshua D; Tian, Lin (2020). An expanded palette of dopamine sensors for multiplex imaging in vivo. Nature Methods, 17(11):1147-1155.

Andronic, Octavian; Ernstbrunner, Lukas; Jüngel, Astrid; Wieser, Karl; Bouaicha, Samy (2020). Biomarkers associated with idiopathic frozen shoulder: a systematic review. Connective Tissue Research, 61(6):509-516.

Lanfear, Joseph H; Voegel, Clarissa D; Binz, Tina M; Paul, Richard A (2020). Hair cortisol measurement in older adults: Influence of demographic and physiological factors and correlation with perceived stress. Steroids, 163:108712.

Boccia, Lavinia; Le Foll, Christelle; Lutz, Thomas A (2020). Noradrenaline signaling in the LPBN mediates amylin's and salmon calcitonin's hypophagic effect in male rats. FASEB Journal, 34(11):15448-15461.

Rühl, Julia; Leung, Carol S; Münz, Christian (2020). Vaccination against the Epstein–Barr virus. Cellular and Molecular Life Sciences, 77(21):4315-4324.

Mattei, Daniele; Ivanov, Andranik; van Oostrum, Marc; Pantelyushin, Stanislav; Richetto, Juliet; Mueller, Flavia; Beffinger, Michal; Schellhammer, Linda; vom Berg, Johannes; Wollscheid, Bernd; Beule, Dieter; Paolicelli, Rosa Chiara; Meyer, Urs (2020). Enzymatic Dissociation Induces Transcriptional and Proteotype Bias in Brain Cell Populations. International Journal of Molecular Sciences, 21(21):7944.

Schmutzer, Michael; Wagner, Andreas (2020). Gene expression noise can promote the fixation of beneficial mutations in fluctuating environments. PLoS Computational Biology, 16(10):e1007727.

Samodelov, Sophia L; Kullak-Ublick, Gerd A; Gai, Zhibo; Visentin, Michele (2020). Organic Cation Transporters in Human Physiology, Pharmacology, and Toxicology. International Journal of Molecular Sciences, 21(21):7890.

Lewinson, Oded; Orelle, Cédric; Seeger, Markus A (2020). Structures of ABC transporters: handle with care. FEBS letters, 594(23):3799-3814.

Han, Ruocheng; Luber, Sandra (2020). Trajectory-based machine learning method and its application to molecular dynamics. Molecular Physics, 118(19-20):e1788189.

Wambui, Joseph; Cernela, Nicole; Stevens, Marc J A; Corti, Sabrina; Stephan, Roger (2020). Draft genome sequences of two phylogenetically distinct clostridium gasigenes strains, CM001 and CM004, isolated from chilled vacuum-packed meat. Microbiology Resource Announcements, 9(42):e01128-20.

Gualdani, Roberta; Seghers, François; Yerna, Xavier; Schakman, Olivier; Tajeddine, Nicolas; Achouri, Younès; Tissir, Fadel; Devuyst, Olivier; Gailly, Philippe (2020). Mechanical activation of TRPV4 channels controls albumin reabsorption by proximal tubule cells. Science Signaling, 13(653):eabc6967.

Sidler, Xaver; Sydler, Titus; Mateos, José Maria; Klausmann, Stefanie; Brugnera, Enrico (2020). Porcine Circovirus Type 2 Pathogenicity Alters Host’s Central Tolerance for Propagation. Pathogens, 9(10):839.

Ullmann, Enrico; Chrousos, George; Perry, Seth W; Wong, Ma-Li; Licinio, Julio; Bornstein, Stefan R; Tseilikman, Olga; Komelkova, Maria; Lapshin, Maxim S; Vasilyeva, Maryia; Zavjalov, Evgenii; Shevelev, Oleg; Khotskin, Nikita; Koncevaya, Galina; Khotskina, Anna S; Moshkin, Mikhail; Cherkasova, Olga; Sarapultsev, Alexey; Ibragimov, Roman; Kritsky, Igor; Fegert, Jörg M; Tseilikman, Vadim; Yehuda, Rachel (2020). Offensive Behavior, Striatal Glutamate Metabolites, and Limbic-Hypothalamic-Pituitary-Adrenal Responses to Stress in Chronic Anxiety. International Journal of Molecular Sciences, 21(20):7440.

Tendl-Schulz, Kristina A; Rössler, Fabian; Wimmer, Philipp; Heber, Ulrike M; Mittlböck, Martina; Kozakowski, Nicolas; Pinker, Katja; Bartsch, Rupert; Dubsky, Peter; Fitzal, Florian; Filipits, Martin; Eckel, Fanny Carolina; Langthaler, Eva-Maria; Steger, Günther; Gnant, Michael; Singer, Christian F; Helbich, Thomas H; Bago-Horvath, Zsuzsanna (2020). Factors influencing agreement of breast cancer luminal molecular subtype by Ki67 labeling index between core needle biopsy and surgical resection specimens. Virchows Archiv, 477(4):545-555.

Zbinden, Aurélie; Pérez-Berlanga, Manuela; De Rossi, Pierre; Polymenidou, Magdalini (2020). Phase separation and neurodegenerative diseases: a disturbance in the force. Developmental Cell, 55(1):45-68.

Alberto, Roger (2020). The “Carbonyl Story” and Beyond; Experiences, Lessons and Implications. Chembiochem, 21(19):2743-2749.

Lucas, Teghan; Kumaratilake, Jaliya; Henneberg, Maciej (2020). Recently increased prevalence of the human median artery of the forearm: A microevolutionary change. Journal of Anatomy, 237(4):623-631.

Tenga, Rafael; Medalia, Ohad (2020). Structure and unique mechanical aspects of nuclear lamin filaments. Current Opinion in Structural Biology, 64:152-159.

Wenger, Roland H (2020). Thin air - thick science. Nature Reviews. Molecular Cell Biology, 21(10):567.

Henco, Lara; Diaconescu, Andreea O; Lahnakoski, Juha M; Brandi, Marie-Luise; Hörmann, Sophia; Hennings, Johannes; Hasan, Alkomiet; Papazova, Irina; Strube, Wolfgang; Bolis, Dimitris; Schilbach, Leonhard; Mathys, Christoph (2020). Aberrant computational mechanisms of social learning and decision-making in schizophrenia and borderline personality disorder. PLoS Computational Biology, 16(9):e1008162.

Eisenbeiss, Lisa; Binz, Tina Maria; Baumgartner, Markus R; Kraemer, Thomas; Steuer, Andrea Eva (2020). Towards best practice in hair metabolomic studies: Systematic investigation on the impact of hair length and color. Metabolites, 10(10):381.

Liberale, Luca; Bertolotto, Maria; Minetti, Silvia; Contini, Paola; Verzola, Daniela; Ameri, Pietro; Ghigliotti, Giorgio; Pende, Aldo; Camici, Giovanni G; Carbone, Federico; Montecucco, Fabrizio (2020). Recombinant Tissue Plasminogen Activator (r-tPA) Induces In-Vitro Human Neutrophil Migration via Low Density Lipoprotein Receptor-Related Protein 1 (LRP-1). International Journal of Molecular Sciences, 21:19.

Nazari-Shafti, Timo Z; Neuber, Sebastian; Duran, Ana G; Exarchos, Vasileios; Beez, Christien M; Meyborg, Heike; Krüger, Katrin; Wolint, Petra; Buschmann, Johanna; Böni, Roland; Seifert, Martina; Falk, Volkmar; Emmert, Maximilian Y (2020). MiRNA Profiles of Extracellular Vesicles Secreted by Mesenchymal Stromal Cells-Can They Predict Potential Off-Target Effects? Biomolecules, 10(9):1353.

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Agca, Cavit; Grimm, Christian (2020). A simple guide for generating BAC transgenic animals for retinal research. Methods in Molecular Biology, 2092:109-122.

Bidla, Gawa; Watkins, David; Chéry, Céline; Froese, D. Sean; Ells, Courtney; Kerachian, Matin; Saskin, Avi; Christensen, Karen E; Gilfix, Brian M; Guéant, Jean-Louis; Rosenblatt, David S (2020). Biochemical analysis of patients with mutations in MTHFD1 and a diagnosis of methylenetetrahydrofolate dehydrogenase 1 deficiency. Molecular Genetics and Metabolism, 130(3):179-182.

Kuhn, Benedikt T; Zimmermann, Iwan; Egloff, Pascal; Hürlimann, Lea M; Hutter, Cedric A J; Miscenic, Christian; Dawson, Roger J P; Seeger, Markus A; Geertsma, Eric R (2020). Biotinylation of Membrane Proteins for Binder Selections. In: Perez, Camilo; Maier, Timm. Expression, Purification, and Structural Biology of Membrane Proteins. Switzerland: Springer, 151-165.

Shaul, Merav E; Eyal, Ophir; Guglietta, Silvia; Aloni, Pazzit; Zlotnik, Asaf; Forkosh, Ester; Levy, Liran; Weber, Lukas M; Levin, Yonathan; Pomerantz, Alon; Nechushtan, Hovav; Eruslanov, Evgeniy; Singhal, Sunil; Robinson, Mark D; Krieg, Carsten; Fridlender, Zvi G (2020). Circulating neutrophil subsets in advanced lung cancer patients exhibit unique immune signature and relate to prognosis. FASEB Journal, 34(3):4204-4218.

Willi, Yvonne; Fracassetti, Marco; Bachmann, Olivier; Van Buskirk, Josh (2020). Demographic Processes Linked to Genetic Diversity and Positive Selection across a Species' Range. Plant Communications, 1(6):100111.

Tsapara, Georgia; Andermatt, Irwin; Stoeckli, Esther T (2020). Gene Silencing in Chicken Brain Development. In: Sprecher, Simon G. Brain Development. Humana, New York, NY: Springer, 439-456.

Ludwig, Barbara; Wolf, Eckhard; Schönmann, Uwe; Ludwig, Stefan (2020). Large Animal Models of Diabetes. Methods in Molecular Biology, 2128:115-134.

Hussung, Saskia; Fritsch, Ralph M (2020). Multi-target ddPCR Assays zur Detektion von KRAS- und NRAS-Mutationen. BIOspektrum, 26(6):629-634.

Seyffert, Michael; Fraefel, Cornel (2020). Multifluorescence live analysis of herpes simplex virus type-1 replication. In: Diefenbach, Russel J; Fraefel, Cornel. Herpes Simplex Virus. Totowa, NJ: Springer, 365-376.

Kakui, Hiroyuki; Yamazaki, Misako; Hamaya, Naoto-Benjamin; Shimizu, Kentaro K (2020). Pollen Grain Counting Using a Cell Counter. In: Geitmann, Anja. Methods in Molecular Biology: Pollen and Pollen Tube Biology. Berlin: Springer, 1-11.

Haudry, A; Laurent, S; Kapun, Martin (2020). Population Genomics on the Fly: Recent Advances in Drosophila. In: Dutheil, Julien Y. Statistical Population Genomics. Basel: Springer, 357-396.

Baubec, Tuncay; Defossez, Pierre-Antoine (2020). Reading DNA Modifications. Journal of Molecular Biology, 432(6):1599-1601.

Azpeitia, Eugenio; Balanzario, Eugenio P; Wagner, Andreas (2020). Signaling pathways have an inherent need for noise to acquire information. BMC Bioinformatics, 21:462.

Borrelli, Costanza; Moor, Andreas E (2020). Single-Molecule RNA FISH in Whole-Mount Organoids. In: Ordóñez-Morán, Paloma. Intestinal Stem Cells. Nottingham, UK: Springer, 237-247.

Panagopoulos, Andreas; Altmeyer, Matthias (2020). The Hammer and the Dance of Cell Cycle Control. Trends in Biochemical Sciences, 46(4):301-314.

2019

Nur, Selim; Sparber, Florian; Lemberg, Christina; Guiducci, Eva; Schweizer, Tiziano A; Zwicky, Pascale; Becher, Burkhard; LeibundGut-Landmann, Salomé (2019). IL-23 supports host defense against systemic Candida albicans infection by ensuring myeloid cell survival. PLoS Pathogens, 15(12):e1008115.

Galindo‐Trigo, Sergio; Blanco‐Touriñán, Noel; DeFalco, Thomas A; Wells, Eloise S; Gray, Julie E; Zipfel, Cyril; Smith, Lisa M (2019). Cr RLK 1L receptor‐like kinases HERK 1 and ANJEA are female determinants of pollen tube reception. EMBO Reports:e48466.

Storti, Gabriele; Scioli, Maria Giovanna; Kim, Bong-Sung; Orlandi, Augusto; Cervelli, Valerio (2019). Adipose-Derived Stem Cells in Bone Tissue Engineering: Useful Tools with New Applications. Stem Cells International, 2019:3673857.

Noreen, Faiza; Küng, Taya; Tornillo, Luigi; Parker, Hannah; Silva, Miguel; Weis, Stefan; Marra, Giancarlo; Rad, Roland; Truninger, Kaspar; Schär, Primo (2019). DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways. Clinical Epigenetics, 11:196.

Gatien, Julie; Mermillod, Pascal; Tsikis, Guillaume; Bernardi, Ophélie; Janati Idrissi, Sarah; Uzbekov, Rustem; Le Bourhis, Daniel; Salvetti, Pascal; Almiñana, Carmen; Saint-Dizier, Marie (2019). Metabolomic profile of oviductal extracellular vesicles across the estrous cycle in cattle. International Journal of Molecular Sciences, 20(24):E6339.

Zhang, Lu; Fu, Xianjun; Gui, Ting; Wang, Tianqi; Wang, Zhenguo; Kullak-Ublick, Gerd A; Gai, Zhibo (2019). Effects of Farnesiferol B on Ischemia-Reperfusion-Induced Renal Damage, Inflammation, and NF-κB Signaling. International Journal of Molecular Sciences, 20(24):6280.

Decker, Sarah; Zwick, Anabel; Khaja Saleem, Shifa; Kissel, Sandra; Rettig, Andres; Aumann, Konrad; Dierks, Christine (2019). Optimized xenograft protocol for chronic lymphocytic leukemia results in high engraftment efficiency for All CLL subgroups. International Journal of Molecular Sciences, 20(24):E6277.

Belavgeni, Alexia; Bornstein, Stefan R; Linkermann, Andreas (2019). Prominin-2 Suppresses Ferroptosis Sensitivity. Developmental Cell, 51(5):548-549.

Mueller, Simon M; Mueller, Felix; Reinhardt, Julia; Itin, Peter; Navarini, Alexander; Stippich, Christoph; Borgwardt, Stefan (2019). Assessment of the impact of sex in intensity, skin flares and central processing of histaminergic itch - a pilot study. Experimental Dermatology, 28(12):1493-1500.

Kallenberger, Lia; Erb, Rachel; Kralickova, Lucie; Patrignani, Andrea; Stöckli, Esther; Jiricny, Josef (2019). Ectopic Methylation of a Single Persistently Unmethylated CpG in the Promoter of the Vitellogenin Gene Abolishes Its Inducibility by Estrogen through Attenuation of Upstream Stimulating Factor Binding. Molecular and Cellular Biology, 39(23):00436-19.

Begemann, Anaïs; Acuña, Mario A; Zweier, Markus; Vincent, Marie; Steindl, Katharina; Bachmann-Gagescu, Ruxandra; Hackenberg, Annette; Abela, Lucia; Plecko, Barbara; Kroell-Seger, Judith; Baumer, Alessandra; Yamakawa, Kazuhiro; Inoue, Yushi; Asadollahi, Reza; Sticht, Heinrich; Zeilhofer, Hanns Ulrich; Rauch, Anita (2019). Further corroboration of distinct functional features in SCN2A variants causing intellectual disability or epileptic phenotypes. Molecular Medicine, 25:6.

Fragni, Martina; Palma Lopez, Lilian Patricia; Rossini, Elisa; Abate, Andrea; Cosentini, Deborah; Salvi, Valentina; Vezzoli, Sara; Poliani, Pietro Luigi; Bosisio, Daniela; Hantel, Constanze; Tiberio, Guido A M; Grisanti, Salvatore; Memo, Maurizio; Terzolo, Massimo; Berruti, Alfredo; Sigala, Sandra (2019). In vitro cytotoxicity of cabazitaxel in adrenocortical carcinoma cell lines and human adrenocortical carcinoma primary cell cultures. Molecular and Cellular Endocrinology, 498:110585.

Freyre, Christophe A C; Rauher, Pascal C; Ejsing, Christer S; Klemm, Robin W (2019). MIGA2 Links Mitochondria, the ER, and Lipid Droplets and Promotes De Novo Lipogenesis in Adipocytes. Molecular Cell, 76(5):811-825.e14.

Baeza-Lehnert, Felipe; Saab, Aiman S; Gutiérrez, Robin; Larenas, Valeria; Díaz, Esteban; Horn, Melanie; Vargas, Miriam; Hösli, Ladina; Stobart, Jillian; Hirrlinger, Johannes; Weber, Bruno; Barros, L Felipe (2019). Non-Canonical Control of Neuronal Energy Status by the Na+ Pump. Cell Metabolism, 29(3):668-680.e4.

Barbieri, Chiara; Barquera, Rodrigo; Arias, Leonardo; Sandoval, José R; Acosta, Oscar; Zurita, Camilo; Aguilar-Campos, Abraham; Tito-Álvarez, Ana M; Serrano-Osuna, Ricardo; Gray, Russell D; Heggarty, Paul; Shimizu, Kentaro K; Fujita, Ricardo; Stoneking, Mark; Pugach, Irina; Fehren-Schmitz, Lars (2019). The current genomic landscape of western South America: Andes, Amazonia and Pacific Coast. Molecular Biology and Evolution, 36(12):2698-2713.

Baral, Pravas K; Yin, Jiang; Aguzzi, Adriano; James, Michael N G (2019). Transition of the prion protein from a structured cellular form (PrPC) to the infectious scrapie agent (PrPSc). Protein Science, 28(12):2055-2063.

Heller, Davide; Szklarczyk, Damian; von Mering, Christian (2019). Tree reconciliation combined with subsampling improves large scale inference of orthologous group hierarchies. BMC Bioinformatics, 20(1):228.

Allain, Frédéric H-T; Jinek, Martin (2019). Editorial overview: Protein-nucleic acid interactions - cryo-EM, what else? Current Opinion in Structural Biology, 59:vi-viii.

Denoth-Lippuner, Annina; Jessberger, Sebastian (2019). Mechanisms of cellular rejuvenation. FEBS letters, 593(23):3381-3392.

Kumar, Ananthanarayanan; Clerici, Marcello; Muckenfuss, Lena M; Passmore, Lori A; Jinek, Martin (2019). Mechanistic insights into mRNA 3'-end processing. Current Opinion in Structural Biology, 59:143-150.

Ehrenmann, Janosch; Schöppe, Jendrik; Klenk, Christoph; Plückthun, Andreas (2019). New views into class B GPCRs from the crystal structure of PTH1R. FEBS Journal, 286(24):4852-4860.

Troxler, Lukas J; Werren, Joel P; Schaffner, Thierry O; Mostacci, Nadezda; Vermathen, Peter; Vermathen, Martina; Wüthrich, Daniel; Simillion, Cedric; Brugger, Silvio D; Bruggmann, Rémy; Hathaway, Lucy J; Furrer, Julien; Hilty, Markus (2019). Carbon source regulates polysaccharide capsule biosynthesis in Streptococcus pneumoniae. Journal of Biological Chemistry, 294(46):17224-17238.

Grosskurth, Elmar D; Bach, Dominik R; Economides, Marcos; Huys, Quentin J M; Holper, Lisa (2019). No substantial change in the balance between model-free and model-based control via training on the two-step task. PLoS Computational Biology, 15(11):e1007443.

Lucienne, Marie; Aguilar-Pimentel, Juan Antonio; Amarie, Oana V; Becker, Lore; Calzada-Wack, Julia; da Silva-Buttkus, Patricia; Garrett, Lillian; Hölter, Sabine M; Mayer-Kuckuk, Philipp; Rathkolb, Birgit; Rozman, Jan; Spielmann, Nadine; Treise, Irina; Busch, Dirk H; Klopstock, Thomas; Schmidt-Weber, Carsten; Wolf, Eckhard; Wurst, Wolfgang; Forny, Merima; Mathis, Déborah; Fingerhut, Ralph; Froese, D Sean; Gailus-Durner, Valerie; Fuchs, Helmut; de Angelis, Martin Hrabě; Baumgartner, Matthias R (2019). In-depth phenotyping reveals common and novel disease symptoms in a hemizygous knock-in mouse model (Mut-ko/ki) of mut-type methylmalonic aciduria. Biochimica et Biophysica Acta. Molecular Basis of Disease:165622.

Saunders, Gary; Baudis, Michael; Becker, Regina; Beltran, Sergi; Béroud, Christophe; Birney, Ewan; Brooksbank, Cath; Brunak, Søren; Van den Bulcke, Marc; Drysdale, Rachel; Capella-Gutierrez, Salvador; Flicek, Paul; Florindi, Francesco; Goodhand, Peter; Gut, Ivo; Heringa, Jaap; Holub, Petr; Hooyberghs, Jef; Juty, Nick; Keane, Thomas M; Korbel, Jan O; Lappalainen, Ilkka; Leskosek, Brane; Matthijs, Gert; Mayrhofer, Michaela Th; Metspalu, Andres; Navarro, Arcadi; Newhouse, Steven; Nyrönen, Tommi; Page, Angela; et al (2019). Leveraging European infrastructures to access 1 million human genomes by 2022. Nature Reviews. Genetics, 20(11):693-701.

Voigt, Fabian F; Kirschenbaum, Daniel; Platonova, Evgenia; Pagès, Stéphane; Campbell, Robert A A; Kastli, Rahel; Schaettin, Martina; Egolf, Ladan; van der Bourg, Alexander; Bethge, Philipp; Haenraets, Karen; Frézel, Noémie; Topilko, Thomas; Perin, Paola; Hillier, Daniel; Hildebrand, Sven; Schueth, Anna; Roebroeck, Alard; Roska, Botond; Stoeckli, Esther T; Pizzala, Roberto; Renier, Nicolas; Zeilhofer, Hanns Ulrich; Karayannis, Theofanis; Ziegler, Urs; Batti, Laura; Holtmaat, Anthony; Lüscher, Christian; Aguzzi, Adriano; Helmchen, Fritjof (2019). The mesoSPIM initiative: open-source light-sheet microscopes for imaging cleared tissue. Nature Methods, 16(11):1105-1108.

Nasyrov, Emil; Nolan, Karen A; Wenger, Roland H; Marti, Hugo H; Kunze, Reiner (2019). The neuronal oxygen-sensing pathway controls postnatal vascularization of the murine brain. FASEB Journal, 33(11):12812-12824.

Izuno, Ayako; Wicker, Thomas; Hatakeyama, Masaomi; Copetti, Dario; Shimizu, Kentaro K (2019). Updated Genome Assembly and Annotation for Metrosideros polymorpha, an Emerging Model Tree Species of Ecological Divergence. G3 : Genes, Genomes, Genetics, 9(11):3513-3520.

Valaperti, Alan; Bezel, Pascal; Vonow-Eisenring, Maya; Franzen, Daniel; Steiner, Urs C (2019). Variability of cytokine concentration in whole blood serum and bronchoalveolar lavage over time. Cytokine, 123:154768.

Boneberg, Franziska M; Brandmann, Tobias; Kobel, Lena; van den Heuvel, Jasmin; Bargsten, Katja; Bammert, Lukas; Kutay, Ulrike; Jinek, Martin (2019). Corrigendum: Molecular mechanism of the RNA helicase DHX37 and its activation by UTP14A in ribosome biogenesis. RNA, 25(11):1576.

Lemmin, Thomas; Soto, Cinque (2019). Glycosylator: a Python framework for the rapid modeling of glycans. BMC Bioinformatics, 20(1):513.

Schubert, Mario; Binnewerg, Björn; Voronkina, Alona; Muzychka, Lyubov; Wysokowski, Marcin; Petrenko, Iaroslav; Kovalchuk, Valentine; Tsurkan, Mikhail; Martinovic, Rajko; Bechmann, Nicole; Ivanenko, Viatcheslav N; Fursov, Andriy; Smolii, Oleg B; Fromont, Jane; Joseph, Yvonne; Bornstein, Stefan R; Giovine, Marco; Erpenbeck, Dirk; Guan, Kaomei; Ehrlich, Hermann (2019). Naturally Prefabricated Marine Biomaterials: Isolation and Applications of Flat Chitinous 3D Scaffolds from (Demospongiae: Verongiida). International Journal of Molecular Sciences, 20(20):online.

Singh, Abhay Narayan; Oehler, Judith; Torrecilla, Ignacio; Kilgas, Susan; Li, Shudong; Vaz, Bruno; Guérillon, Claire; Fielden, John; Hernandez-Carralero, Esperanza; Cabrera, Elisa; Tullis, Iain Dc; Meerang, Mayura; Barber, Paul R; Freire, Raimundo; Parsons, Jason; Vojnovic, Borivoj; Kiltie, Anne E; Mailand, Niels; Ramadan, Kristijan (2019). The p97-Ataxin 3 complex regulates homeostasis of the DNA damage response E3 ubiquitin ligase RNF8. EMBO Journal Online, 38(21):e102361.

Zhang, Hanlin; Alsaleh, Ghada; Feltham, Jack; Sun, Yizhe; Napolitano, Gennaro; Riffelmacher, Thomas; Charles, Philip; Frau, Lisa; Hublitz, Philip; Yu, Zhanru; Mohammed, Shabaz; Ballabio, Andrea; Balabanov, Stefan; Mellor, Jane; Simon, Anna Katharina (2019). Polyamines Control eIF5A Hypusination, TFEB Translation, and Autophagy to Reverse B Cell Senescence. Molecular Cell, 76(1):110-125.e9.

Generali, Melanie; Casanova, Elisa A; Kehl, Debora; Wanner, Debora; Hoerstrup, Simon P; Cinelli, Paolo; Weber, Benedikt (2019). Autologous endothelialized small-caliber vascular grafts engineered from blood-derived induced pluripotent stem cells. Acta Biomaterialia, 97:333-343.

Rauschmeier, René; Gustafsson, Charlotte; Reinhardt, Annika; A‐Gonzalez, Noelia; Tortola, Luigi; Cansever, Dilay; Subramanian, Sethuraman; Taneja, Reshma; Rossner, Moritz J; Sieweke, Michael H; Greter, Melanie; Månsson, Robert; Busslinger, Meinrad; Kreslavsky, Taras (2019). Bhlhe40 and Bhlhe41 transcription factors regulate alveolar macrophage self‐renewal and identity. EMBO Journal Online, 38(19):e101233.

Drinnenberg, Ines A; Berger, Frédéric; Elsässer, Simon J; Andersen, Peter R; Ausió, Juan; Bickmore, Wendy A; Blackwell, Alexander R; Erwin, Douglas H; Gahan, James M; Gaut, Brandon S; Harvey, Zachary H; Henikoff, Steven; Kao, Joyce Y; Kurdistani, Siavash K; Lemos, Bernardo; Levine, Mia T; Luger, Karolin; Malik, Harmit S; Martín-Durán, José M; Peichel, Catherine L; Renfree, Marilyn B; Rutowicz, Kinga; Sarkies, Peter; Schmitz, Robert J; Technau, Ulrich; Thornton, Joseph W; Warnecke, Tobias; Wolfe, Kenneth H (2019). EvoChromo: towards a synthesis of chromatin biology and evolution. Development, 146(19):dev178962.

Heywood, Wendy E; Doykov, Ivan; Spiewak, Justyna; Hallqvist, Jenny; Mills, Kevin; Nowak, Albina (2019). Global glycosphingolipid analysis in urine and plasma of female Fabry disease patients. Biochimica et Biophysica Acta. Molecular Basis of Disease, 1865(10):2726-2735.

Deretic, Vojo; Prossnitz, Eric; Burge, Mark; Campen, Matthew J; Cannon, Judy; Liu, Ke Jian; Liu, Meilian; Hall, Pamela; Sklar, Larry A; Allers, Lee; Mariscal, Luisa; Garcia, Sally Ann; Weaver, John; Baehrecke, Eric H; Behrends, Christian; Cecconi, Francesco; Codogno, Patrice; Chen, Guang-Chao; Elazar, Zvulun; Eskelinen, Eeva-Liisa; Fourie, Bernard; Gozuacik, Devrim; Hong, Wanjin; Jo, Eun-Kyeong; Johansen, Terje; Juhász, Gábor; Kimchi, Adi; Ktistakis, Nicholas; Kroemer, Guido; Mizushima, Noboru; et al (2019). Autophagy, Inflammation, and Metabolism (AIM) Center in its second year. Autophagy, 15(10):1829-1833.

Smith, Neil; Longo, Nicola; Levert, Keith; Hyland, Keith; Blau, Nenad (2019). Exploratory study of the effect of one week of orally administered CNSA-001 (sepiapterin) on CNS levels of tetrahydrobiopterin, dihydrobiopterin and monoamine neurotransmitter metabolites in healthy volunteers. Molecular Genetics and Metabolism, 21:100500.

Li, Chao; Li, Yunlun; Gai, Zhibo (2019). Bile Acids and Farnesoid X Receptor: Novel Target for the Treatment of Diabetic Cardiomyopathy. Current Protein & Peptide Science, 20(10):976-983.

König, Désirée; Dagenais, Paule; Senk, Anita; Djonov, Valentin; Aegerter, Christof M; Jaźwińska, Anna (2019). Distribution and Restoration of Serotonin-Immunoreactive Paraneuronal Cells During Caudal Fin Regeneration in Zebrafish. Frontiers in Molecular Neuroscience:12:227.

Genov, Nikolai; Castellana, Stefano; Scholkmann, Felix; Capocefalo, Daniele; Truglio, Mauro; Rosati, Jessica; Turco, Elisa Maria; Biagini, Tommaso; Carbone, Annalucia; Mazza, Tommaso; Relógio, Angela; Mazzoccoli, Gianluigi (2019). A Multi-Layered Study on Harmonic Oscillations in Mammalian Genomics and Proteomics. International Journal of Molecular Sciences, 20(18):4585.

Asquith, Christopher R M; Sil, Bruno C; Laitinen, Tuomo; Tizzard, Graham J; Coles, Simon J; Poso, Antti; Hofmann-Lehmann, Regina; Hilton, Stephen T (2019). Novel epidithiodiketopiperazines as anti-viral zinc ejectors of the Feline Immunodeficiency Virus (FIV) nucleocapsid protein as a model for HIV infection. Bioorganic & Medicinal Chemistry, 27(18):4174-4184.

Cimadamore, Alessia; Massari, Francesco; Santoni, Matteo; Mollica, Veronica; Di Nunno, Vincenzo; Cheng, Liang; Lopez-Beltran, Antonio; Scarpelli, Marina; Montironi, Rodolfo; Moch, Holger (2019). Molecular characterization and diagnostic criteria of renal cell carcinoma with emphasis on liquid biopsies. Expert Review of Molecular Diagnostics:1-10.

Anderegg, Linda; Im Hof Gut, Michelle; Hetzel, Udo; Howerth, Elizabeth W; Leuthard, Fabienne; Kyöstilä, Kaisa; Lohi, Hannes; Pettitt, Louise; Mellersh, Cathryn; Minor, Katie M; Mickelson, James R; Batcher, Kevin; Bannasch, Danika; Jagannathan, Vidhya; Leeb, Tosso (2019). NME5 frameshift variant in Alaskan Malamutes with primary ciliary dyskinesia. PLoS Genetics, 15(9):e1008378.

Wegleiter, Thomas; Jessberger, Sebastian (2019). Sleep or deplete: how the choroid plexus helps to keep neural stem cells in balance. EMBO Journal Online, 38(17):e103013.

Ramaekers, Ariane; Claeys, Annelies; Kapun, Martin; Mouchel-Vielh, Emmanuèle; Potier, Delphine; Weinberger, Simon; Grillenzoni, Nicola; Dardalhon-Cuménal, Delphine; Yan, Jiekun; Wolf, Reinhard; Flatt, Thomas; Buchner, Erich; Hassan, Bassem A (2019). Altering the temporal regulation of one transcription factor drives evolutionary trade-offs between head sensory organs. Developmental Cell, 50(6):780-792.

Przybyło, Marcin; Hummel, Jürgen; Ortmann, Sylvia; Codron, Daryl; Kohlschein, Gina-Marie; Kilga, Daniela; Smithyman, Juliet; Przybyło, Urszula; Świerk, Samanta; Hammer, Sven; Hatt, Jean-Michel; Górka, Paweł; Clauss, Marcus (2019). Digesta passage in nondomestic ruminants: separation mechanisms in ‘moose-type’ and ‘cattle-type’ species, and seemingly atypical browsers. Comparative Biochemistry and Physiology. Part A, Molecular & Integrative Physiology, 235:180-192.

Clauss, Marcus; Hagen, Katharina B; Frei, Samuel; Ortmann, Sylvia; Lawrenz, Arne; Głogowski, Robert; Fritz, Julia; Flach, Edmund; Kreuzer, Michael (2019). Digestive anatomy, physiology, resting metabolism and methane production of captive maras (Dolichotis patagonum). Comparative Biochemistry and Physiology. Part A, Molecular & Integrative Physiology, 235:82-89.

Jang, Cholsoon; Hui, Sheng; Zeng, Xianfeng; Cowan, Alexis J; Wang, Lin; Chen, Li; Morscher, Raphael J; Reyes, Jorge; Frezza, Christian; Hwang, Ho Young; Imai, Akito; Saito, Yoshiaki; Okamoto, Keitaro; Vaspoli, Christine; Kasprenski, Loewe; Zsido, Gerald A; Gorman, Joseph H; Gorman, Robert C; Rabinowitz, Joshua D (2019). Metabolite Exchange between Mammalian Organs Quantified in Pigs. Cell Metabolism, 30(3):594-606.e3.

Diaconescu, Andreea Oliviana; Hauke, Daniel Jonas; Borgwardt, Stefan (2019). Models of persecutory delusions: a mechanistic insight into the early stages of psychosis. Molecular Psychiatry, 24(9):1258-1267.

Choobdar, Sarvenaz; Ahsen, Mehmet E; Crawford, Jake; Tomasoni, Mattia; Fang, Tao; Lamparter, David; Lin, Junyuan; Hescott, Benjamin; Hu, Xiaozhe; Mercer, Johnathan; Natoli, Ted; Narayan, Rajiv; von Mering, C; Subramanian, Aravind; Zhang, Jitao D; Stolovitzky, Gustavo; Kutalik, Zoltán; Lage, Kasper; Slonim, Donna K; Saez-Rodriguez, Julio; Cowen, Lenore J; Bergmann, Sven; Marbach, Daniel (2019). Assessment of network module identification across complex diseases. Nature Methods, 16(9):843-852.

Madadi, Soheil; Schwarzenbach, Heidi; Lorenzen, Johan; Soleimani, Meysam (2019). MicroRNA expression studies: challenge of selecting reliable reference controls for data normalization. Cellular and Molecular Life Sciences, 76(18):3497-3514.

Lee, Hyung-Ok; Gallego-Villar, Lorena; Grisch-Chan, Hiu Man; Häberle, Johannes; Thöny, Beat; Kruger, Warren D (2019). Treatment of Cystathionine β-Synthase Deficiency in Mice Using a Minicircle-Based Naked DNA Vector. Human Gene Therapy, 30(9):1093-1100.

Schmid, Franca; Barrett, Matthew J P; Obrist, Dominik; Weber, Bruno; Jenny, Patrick (2019). Red blood cells stabilize flow in brain microvascular networks. PLoS Computational Biology, 15(8):e1007231.

Konietzko, Uwe; Gersbacher, Manuel T; Streuli, Jeremy; Krüger, Maik; Thöni, Sarina; Kins, Stefan; Nitsch, Roger M (2019). A fluorescent protein-readout for transcriptional activity reveals regulation of APP nuclear signaling by phosphorylation sites. Biological Chemistry, 400(9):1191-1203.

Rizk, John; Kaplinsky, Joseph; Agerholm, Rasmus; Kadekar, Darshana; Ivars, Fredrik; Agace, William W; Wong, W Wei-Lynn; Szucs, Matthew J; Myers, Samuel A; Carr, Steven A; Waisman, Ari; Bekiaris, Vasileios (2019). SMAC mimetics promote NIK-dependent inhibition of CD4+ TH17 cell differentiation. Science Signaling, 12(596):eaaw3469.

Koppe, Georgia; Toutounji, Hazem; Kirsch, Peter; Lis, Stefanie; Durstewitz, Daniel (2019). Identifying nonlinear dynamical systems via generative recurrent neural networks with applications to fMRI. PLoS Computational Biology, 15(8):e1007263.

Fabris, Luca; Spirli, Carlo; Mertens, Joachim (2019). Cell Interactions in Biliary Diseases: Clues from Pathophysiology and Repair Mechanisms to Foster Early Assessment. International Journal of Molecular Sciences, 20(16):3961.

Hurley, Daniel; Luque-Sastre, Laura; Parker, Craig T; Huynh, Steven; Eshwar, Athmanya K; Nguyen, Scott V; Andrews, Nicholas; Moura, Alexandra; Fox, Edward M; Jordan, Kieran; Lehner, Angelika; Stephan, Roger; Fanning, Séamus (2019). Whole-genome sequencing-based characterization of 100 Listeria monocytogenes isolates collected from food processing environments over a four-year period. mSphere, 4(4):e00252-19.

Puleston, Daniel J; Buck, Michael D; Klein Geltink, Ramon I; et al; Pällman, Nora; Balabanov, Stefan (2019). Polyamines and eIF5A Hypusination Modulate Mitochondrial Respiration and Macrophage Activation. Cell Metabolism, 30(2):352-363.e8.

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