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2021

Romito, Marianna; Juillerat, Alexandre; Kok, Yik Lim; Hildenbeutel, Markus; Rhiel, Manuel; Andrieux, Geoffroy; Geiger, Johannes; Rudolph, Carsten; Mussolino, Claudio; Duclert, Aymeric; Metzner, Karin J; Duchateau, Philippe; Cathomen, Toni; Cornu, Tatjana I (2021). Preclinical Evaluation of a Novel TALEN Targeting CCR5 Confirms Efficacy and Safety in Conferring Resistance to HIV-1 Infection. Biotechnology Journal, 16(1):2000023.

2020

Straub, Hervé; Eberl, Leo; Zinn, Manfred; Rossi, René M; Maniura-Weber, Katharina; Ren, Qun (2020). A microfluidic platform for in situ investigation of biofilm formation and its treatment under controlled conditions. Journal of Nanobiotechnology, 18:166.

Heredia-Ponce, Zaira; Gutiérrez-Barranquero, Jose Antonio; Purtschert-Montenegro, Gabriela; Eberl, Leo; Cazorla, Francisco M; de Vicente, Antonio (2020). Biological role of EPS from Pseudomonas syringae pv. syringae UMAF0158 extracellular matrix, focusing on a Psl-like polysaccharide. npj Biofilms and Microbiomes, 6:875.

Dutkowski, Philipp; Mueller, Matteo; Eshmuminov, Dilmurodjon; Bautista Borrego, Lucia; Becker, Dustin; Hefti, Max; Schuler, Martin J; Rudolf von Rohr, Philipp; Clavien, Pierre-Alain (2020). Reply to: Lactate Measurements in an Integrated Perfusion Machine for Human Livers. Nature Biotechnology, 38(11):1263-1264.

Gray, Alison; Bradbury, Andrew R M; Knappik, Achim; Plückthun, Andreas; Borrebaeck, Carl A K; Dübel, Stefan (2020). Animal-free alternatives and the antibody iceberg. Nature Biotechnology, 38(11):1234-1239.

Šimek, Karel; Grujčić, Vesna; Mukherjee, Indranil; Kasalický, Vojtěch; Nedoma, Jiří; Posch, Thomas; Mehrshad, Maliheh; Salcher, Michaela M (2020). Cascading effects in freshwater microbial food webs by predatory Cercozoa, Katablepharidacea and ciliates feeding on aplastidic bacterivorous cryptophytes. FEMS Microbiology Ecology, 96(10):fiaa121.

Anderson, Annette Carola; Rothballer, Michael; Altenburger, Markus Jörg; Woelber, Johan Peter; Karygianni, Lamprini; Vach, Kirstin; Hellwig, Elmar; Al-Ahmad, Ali (2020). Long-Term Fluctuation of Oral Biofilm Microbiota following Different Dietary Phases. Applied and Environmental Microbiology, 86(20):e01421.

Gimeno, A; Kägi, A; Drakopoulos, D; Bänziger, I; Lehmann, E; Forrer, H‐R; Keller, Beat; Vogelgsang, S (2020). From laboratory to the field: biological control of Fusarium graminearum on infected maize crop residues. Journal of applied microbiology, 129(3):680-694.

Gu, Shaohua; Wei, Zhong; Shao, Zhengying; Friman, Ville-Petri; Cao, Kehao; Yang, Tianjie; Kramer, Jos; Wang, Xiaofang; Li, Mei; Mei, Xinlan; Xu, Yangchun; Shen, Qirong; Kümmerli, Rolf; Jousset, Alexandre (2020). Competition for iron drives phytopathogen control by natural rhizosphere microbiomes. Nature Microbiology, 5(8):1002-1010.

Niggli, Selina; Kümmerli, Rolf (2020). Strain Background, Species Frequency, and Environmental Conditions Are Important in Determining Pseudomonas aeruginosa and Staphylococcus aureus Population Dynamics and Species Coexistence. Applied and Environmental Microbiology, 86(18):e00962-20.

Villaseñor, Rodrigo; Pfaendler, Ramon; Ambrosi, Christina; Butz, Stefan; Giuliani, Sara; Bryan, Elana; Sheahan, Thomas W; Gable, Annika L; Schmolka, Nina; Manzo, Massimiliano; Wirz, Joël; Feller, Christian; von Mering, Christian; Aebersold, Ruedi; Voigt, Philipp; Baubec, Tuncay (2020). ChromID identifies the protein interactome at chromatin marks. Nature Biotechnology, 38(6):728-736.

Villaseñor, Rodrigo; Pfaendler, Ramon; Ambrosi, Christina; Butz, Stefan; Giuliani, Sara; Bryan, Elana; Sheahan, Thomas W; Gable, Annika L; Schmolka, Nina; Manzo, Massimiliano; Wirz, Joël; Feller, Christian; von Mering, Christian; Aebersold, Ruedi; Voigt, Philipp; Baubec, Tuncay (2020). Publisher Correction: ChromID identifies the protein interactome at chromatin marks. Nature Biotechnology, 38(6):757.

Kletzmayr, Anna; Clement Frey, Flurina; Zimmermann, Miriam; Eberli, Daniel; Millan, Christopher (2020). An automatable hydrogel culture platform for evaluating efficacy of antibody-based therapeutics in overcoming chemoresistance. Biotechnology Journal, 15(5):e1900439.

Friker, Brian; Morach, Marina; Püntener, Sabrina; Cernela, Nicole; Horlbog, Jule Anna; Stephan, Roger (2020). Assessing the microbiological quality of raw goats' and ewes' tank milk samples in Switzerland. International Dairy Journal, 102:104609.

Sanders, Ashley D; Meiers, Sascha; Ghareghani, Maryam; Porubsky, David; Jeong, Hyobin; van Vliet, M Alexandra C C; Rausch, Tobias; Richter-Pechańska, Paulina; Kunz, Joachim B; Jenni, Silvia; Bolognini, Davide; Longo, Gabriel M C; Raeder, Benjamin; Kinanen, Venla; Zimmermann, Jürgen; Benes, Vladimir; Schrappe, Martin; Mardin, Balca R; Kulozik, Andreas E; Bornhauser, Beat; Bourquin, Jean-Pierre; Marschall, Tobias; Korbel, Jan O (2020). Single-cell analysis of structural variations and complex rearrangements with tri-channel processing. Nature Biotechnology, 38(3):343-354.

Eshmuminov, Dilmurodjon; Becker, Dustin; Bautista Borrego, Lucia; Hefti, Max; Schuler, Martin J; Hagedorn, Catherine; Muller, Xavier; Mueller, Matteo; Onder, Christopher; Graf, Rolf; Weber, Achim; Dutkowski, Philipp; Rudolf von Rohr, Philipp; Clavien, Pierre-Alain (2020). An Integrated Perfusion Machine Preserves Injured Human Livers For 1 Week. Nature Biotechnology, 38(2):189-198.

Aalto-Araneda, Mariella; Pöntinen, Anna; Pesonen, Maiju; Corander, Jukka; Markkula, Annukka; Tasara, Taurai; Stephan, Roger; Korkeala, Hannu (2020). Strain variability of Listeria monocytogenes under NaCl stress elucidated by a high-throughput microbial growth data assembly and analysis protocol. Applied and Environmental Microbiology, 86(6):e02378-19.

Kramer, Jos; López Carrasco, Miguel Ángel; Kümmerli, Rolf (2020). Positive linkage between bacterial social traits reveals that homogeneous rather than specialised behavioral repertoires prevail in natural Pseudomonas communities. FEMS Microbiology Ecology, 96(1):fiz185.

2019

Doswald, Simon; Stark, Wendelin Jan; Beck-Schimmer, Beatrice (2019). Biochemical functionality of magnetic particles as nanosensors: how far away are we to implement them into clinical practice? Journal of Nanobiotechnology, 17:73.

Negrete, Flavia; Jang, Hyein; Gangiredla, Jayanthi; Woo, JungHa; Lee, YouYoung; Patel, Isha R; Chase, Hannah R; Finkelstein, Samantha; Wang, Caroline Z; Srikumar, Shabarinath; Nguyen, Scott; Eshwar, Athmanya; Stephan, Roger; Lehner, Angelika; Fanning, Séamus; Tall, Ben D; Gopinath, Gopal R (2019). Genome-wide survey of efflux pump-coding genes associated with Cronobacter survival, osmotic adaptation, and persistence. Current Opinion in Food Science, 30:32-42.

Silva, Marisa O D; Pernthaler, Jakob (2019). Priming of microcystin degradation in carbon-amended membrane biofilm communities is promoted by oxygen-limited conditions. FEMS Microbiology Ecology, 95(11):157.

Bulzu, Paul-Adrian; Andrei, Adrian-Ştefan; Salcher, Michaela M; Mehrshad, Maliheh; Inoue, Keiichi; Kandori, Hideki; Beja, Oded; Ghai, Rohit; Banciu, Horia L (2019). Casting light on Asgardarchaeota metabolism in a sunlit microoxic niche. Nature Microbiology, 4(7):1129-1137.

Rocha Martin, Vanesa Natalin; Lacroix, Christophe; Killer, Jiri; Bunesova, Vera; Voney, Evelyn; Braegger, Christian; Schwab, Clarissa (2019). Cutibacterium avidum is phylogenetically diverse with a subpopulation being adapted to the infant gut. Systematic and Applied Microbiology, 42(4):506-516.

Fiume, Marc; Cupak, Miroslav; Keenan, Stephen; Rambla, Jordi; de la Torre, Sabela; Dyke, Stephanie O M; Brookes, Anthony J; Carey, Knox; Lloyd, David; Goodhand, Peter; Haeussler, Maximilian; Baudis, Michael; Stockinger, Heinz; Dolman, Lena; Lappalainen, Ilkka; Törnroos, Juha; Linden, Mikael; Spalding, J Dylan; Ur-Rehman, Saif; Page, Angela; Flicek, Paul; Sherry, Stephen; Haussler, David; Varma, Susheel; Saunders, Gary; Scollen, Serena (2019). Federated discovery and sharing of genomic data using Beacons. Nature Biotechnology, 37(3):220-224.

Rocha Martin, Vanesa Natalin; Schwab, Clarissa; Krych, Lukasz; Voney, Evelyn; Geirnaert, Annelies; Braegger, Christian; Lacroix, Christophe (2019). Colonization of Cutibacterium avidum during infant gut microbiota establishment. FEMS Microbiology Ecology, 95(1):fiy215.

2018

Winkler, Hans Christian; Notter, Tina; Meyer, Urs; Naegeli, Hanspeter (2018). Critical review of the safety assessment of titanium dioxide additives in food. Journal of Nanobiotechnology, 16(1):51.

Vogt, Cédric M; Hilbe, Monika; Ackermann, Mathias; Aguilar, Claudi; Eichwald, Catherine (2018). Mouse intestinal microbiota reduction favors local intestinal immunity triggered by antigens displayed in Bacillus subtilis biofilm. Microbial Cell Factories, 17(1):187.

Srikumar, Shabarinath; Cao, Yu; Yan, Qiongqiong; Van Hoorde, Koenraad; Nguyen, Scott; Cooney, Shane; Gopinath, Gopal R; Tall, Ben D; Sivasankaran, Sathesh K; Lehner, Angelika; Stephan, Roger; Fanning, Séamus (2018). RNA sequencing-based transcriptional overview of Xerotolerance in Cronobacter sakazakii SP291. Applied and Environmental Microbiology, 85(3):pii: e01993-18.

Alfreider, Albin; Grimus, Victoria; Luger, Martin; Ekblad, Anja; Salcher, Michaela M; Summerer, Monika (2018). Autotrophic carbon fixation strategies used by nitrifying prokaryotes in freshwater lakes. FEMS Microbiology Ecology, 94(10):fiy163.

Welin, Amanda; Weber, Stephen; Hilbi, Hubert (2018). Quantitative Imaging Flow Cytometry of Legionella-Infected Dictyostelium Amoebae Reveals the Impact of Retrograde Trafficking on Pathogen Vacuole Composition. Applied and Environmental Microbiology, 84(11):e00158.

Silva, Marisa O D; Blom, Judith F; Yankova, Yana; Villiger, Jörg; Pernthaler, Jakob (2018). Priming of microbial microcystin degradation in biomass-fed gravity driven membrane filtration biofilms. Systematic and Applied Microbiology, 41(3):221-231.

Ramirez, Kelly S; Knight, Christopher G; de Hollander, Mattias; Brearley, Francis Q; Constantinides, Bede; Cotton, Anne; et al; Crowther, Thomas W; Hartman, Kyle; van der Heijden, Marcel G A (2018). Detecting macroecological patterns in bacterial communities across independent studies of global soils. Nature Microbiology, 3(2):189-196.

Schwarz, Carsten; Hartl, Dominik; Eickmeier, Olaf; Hector, Andreas; Benden, Christian; Durieu, Isabelle; Sole, Amparo; Gartner, Silvia; Milla, Carlos E; Barry, Peter James (2018). Progress in Definition, Prevention and Treatment of Fungal Infections in Cystic Fibrosis. Mycopathologia, 183(1):21-32.

Bao, Kai; Bostanci, Nagihan; Thurnheer, Thomas; Grossmann, Jonas; Wolski, Witold E; Thay, Bernard; Belibasakis, Georgios N; Oscarsson, Jan (2018). Aggregatibacter actinomycetemcomitans H-NS promotes biofilm formation and alters protein dynamics of other species within a polymicrobial oral biofilm. npj Biofilms and Microbiomes, 4:12.

2017

Rongvaux, A; Willinger, T; Martinek, J; Strowig, T; Gearty, S V; Teichmann, L L; Saito, Y; Marches, F; Halene, S; Palucka, A K; Manz, M G; Flavell, R A (2017). Corrigendum: Development and function of human innate immune cells in a humanized mouse model. Nature Biotechnology, 35(12):1211.

Agnoli, Kirsty; Freitag, Roman; Gomes, Margarida C; Jenul, Christian; Suppiger, Angela; Mannweiler, Olga; Frauenknecht, Carmen; Janser, Daniel; Vergunst, Annette C; Eberl, Leo (2017). Use of Synthetic Hybrid Strains To Determine the Role of Replicon 3 in Virulence of the Burkholderia cepacia Complex. Applied and Environmental Microbiology, 83(13):e00461-17.

O'Rourke, Kevin P; Loizou, Evangelia; Livshits, Geulah; Schatoff, Emma M; Baslan, Timour; Manchado, Eusebio; Simon, Janelle; Romesser, Paul B; Leach, Benjamin; Han, Teng; Pauli, Chantal; Beltran, Himisha; Rubin, Mark A; Dow, Lukas E; Lowe, Scott W (2017). Transplantation of engineered organoids enables rapid generation of metastatic mouse models of colorectal cancer. Nature Biotechnology, 35(6):1-8.

Thind, Anupriya Kaur; Wicker, Thomas; Šimková, Hana; Fossati, Dario; Moullet, Odile; Brabant, Cécile; Vrána, Jan; Doležel, Jaroslav; Krattinger, Simon G (2017). Rapid cloning of genes in hexaploid wheat using cultivar-specific long-range chromosome assembly. Nature Biotechnology, 35(8):793-796.

Althaus, Denise; Jermini, Marco; Giannini, Petra; Martinetti, Gladys; Reinholz, Danuta; Nüesch-Inderbinen, Magdalena; Lehner, Angelika; Stephan, Roger (2017). Local outbreak of Listeria monocytogenes serotype 4b sequence type 6 due to contaminated meat pâté. Foodborne Pathogens and Disease, 14(4):219-222.

Lun, Xiao-Kang; Zanotelli, Vito R T; Wade, James D; Schapiro, Denis; Tognetti, Marco; Dobberstein, Nadine; Bodenmiller, Bernd (2017). Influence of node abundance on signaling network state and dynamics analyzed by mass cytometry. Nature Biotechnology, 35(2):164-172.

Carlier, Aurelien; Cnockaert, Margo; Fehr, Linda; Vandamme, Peter; Eberl, Leo (2017). Draft genome and description of Orrella dioscoreae gen. nov. sp. nov., a new species of Alcaligenaceae isolated from leaf acumens of Dioscorea sansibarensis. Systematic and Applied Microbiology, 40(1):11-21.

Frueh, Florian S; Menger, Michael D; Lindenblatt, Nicole; Giovanoli, Pietro; Laschke, Matthias W (2017). Current and emerging vascularization strategies in skin tissue engineering. Critical Reviews in Biotechnology, 37(5):613-625.

Vahdati, Ali R; Sprouffske, Kathleen; Wagner, Andreas (2017). Effect of population size and mutation rate on the evolution of RNA sequences on an adaptive landscape determined by RNA folding. International Journal of Biological Sciences, 13(9):1138-1151.

2016

Hinger, Doris; Gräfe, Susanna; Navarro, Fabrice; Spingler, Bernhard; Pandiarajan, Devaraj; Walt, Heinrich; Couffin, Anne-Claude; Maake, Caroline (2016). Lipid nanoemulsions and liposomes improve photodynamic treatment efficacy and tolerance in CAL-33 tumor bearing nude mice. Journal of Nanobiotechnology, 14:71.

Hinger, Doris; Navarro, Fabrice; Käch, Andres; Thomann, Jean-Sébastien; Mittler, Frédérique; Couffin, Anne-Claude; Maake, Caroline (2016). Photoinduced effects of m-tetrahydroxyphenylchlorin loaded lipid nanoemulsions on multicellular tumor spheroids. Journal of Nanobiotechnology, 14:68.

Manske, Christian; Schell, Ursula; Hilbi, Hubert (2016). Metabolism of myo-inositol by legionella pneumophila promotes infection of amoebae and macrophages. Applied and Environmental Microbiology, 82(16):5000-5014.

Lindsay, Helen; Burger, Alexa; Biyong, Berthin; Felker, Anastasia; Hess, Christopher; Zaugg, Jonas; Chiavacci, Elena; Anders, Carolin; Jinek, Martin; Mosimann, Christian; Robinson, Mark D (2016). CrispRVariants charts the mutation spectrum of genome engineering experiments. Nature Biotechnology, 34(7):701-702.

Johler, Sophia; Stephan, Roger; Althaus, Denise; Ehling-Schulz, Monika; Grunert, Tom (2016). High-resolution subtyping of Staphylococcus aureus strains by means of Fourier-transform infrared spectroscopy. Systematic and Applied Microbiology, 39(3):189-194.

Vogt, Cédric M; Schraner, Elisabeth M; Aguilar, Claudio; Eichwald, Catherine (2016). Heterologous expression of antigenic peptides in Bacillus subtilis biofilms. Microbial Cell Factories, 15:137.

Arora, Natasha; Schuenemann, Verena J; Jäger, Günter; Peltzer, Alexander; Seitz, Alexander; Herbig, Alexander; Strouhal, Michal; Grillová, Linda; Sánchez-Busó, Leonor; Kühnert, Denise; Bos, Kirsten I; Davis, Leyla Rivero; Mikalová, Lenka; Bruisten, Sylvia; Komericki, Peter; French, Patrick; Grant, Paul R; Pando, María A; Vaulet, Lucía Gallo; Fermepin, Marcelo Rodríguez; Martinez, Antonio; Centurion Lara, Arturo; Giacani, Lorenzo; Norris, Steven J; Šmajs, David; Bosshard, Philipp P; González-Candelas, Fernando; Nieselt, Kay; Krause, Johannes; Bagheri, Homayoun C (2016). Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster. Nature Microbiology, 2:16245.

Dirren, Sebastian; Posch, Thomas (2016). Promiscuous and specific bacterial symbiont acquisition in the amoeboid genus Nuclearia (Opisthokonta). FEMS Microbiology Ecology, 92(8):fiw105.

Guldimann, Claudia; Boor, Kathryn J; Wiedmann, Martin; Guariglia-Oropeza, Veronica (2016). Resilience in the face of uncertainty: Sigma Factor B fine-tunes gene expression to support homeostasis in gram-positive bacteria. Applied and Environmental Microbiology, 82(15):4456-4469.

Schiavi, Elisa; Gleinser, Marita; Molloy, Evelyn; Groeger, David; Frei, Remo; Ferstl, Ruth; Rodriguez-Perez, Noelia; Ziegler, Mario; Grant, Ray; Moriarty, Thomas Fintan; Plattner, Stephan; Healy, Selena; O'Connell Motherway, Mary; Akdis, Cezmi A; Roper, Jennifer; Altmann, Friedrich; van Sinderen, Douwe; O'Mahony, Liam (2016). The surface-associated exopolysaccharide of bifidobacterium longum 35624 plays an essential role in dampening host proinflammatory responses and repressing local TH17 responses. Applied and Environmental Microbiology, 82(24):7185-7196.

2015

Krause, Sascha; Niklaus, Pascal A; Badwan Morcillo, Sara; Meima Franke, Marion; Lüke, Claudia; Reim, Andreas; Bodelier, Paul L E (2015). Compositional and functional stability of aerobic methane consuming communities in drained and rewetted peat meadows. FEMS Microbiology Ecology, 91(11):fiv119.

Biller-Andorno, Nikola; Grimm, Herwig; Walker, Rebecca L (2015). Professionalism and ethics in animal research. Nature Biotechnology, 33(10):1027-1028.

Keil, Daniel; Niklaus, Pascal A; von Riedmatten, Lars R; Boeddinghaus, Runa S; Dormann, Carsten F; Scherer-Lorenzen, Michael; Kandeler, Ellen; Marhan, Sven (2015). Effects of warming and drought on potential N2O emissions and denitrifying bacteria abundance in grasslands with different land-use. FEMS Microbiology Ecology, 91(7):fiv066.

Takeuchi, Yayoi; Chaffron, Samuel; Salcher, Michaela M; Shimizu-Inatsugi, Rie; Kobayashi, Masaki J; Diway, Bibian; von Mering, Christian; Pernthaler, Jakob; Shimizu, Kentaro K (2015). Bacterial diversity and composition in the fluid of pitcher plants of the genus Nepenthes. Systematic and Applied Microbiology, 38(5):330-339.

Yan, Q; Wang, J; Gangiredla, J; Cao, Y; Martins, M; Gopinath, Gopal R; Stephan, Roger; Lampel, K; Tall, Ben D (2015). Comparative genotypic and phenotypic analysis of Cronobacter species cultured from four powdered infant formula production facilities: indication of pathoadaptation along the food chain. Applied and Environmental Microbiology, 81(13):4388-4402.

Küffner, Robert; Zach, Neta; Norel, Raquel; Hawe, Johann; Schoenfeld, David; Wang, Liuxia; Li, Guang; Fang, Lilly; Mackey, Lester; Hardiman, Orla; Cudkowicz, Merit; Sherman, Alexander; Ertaylan, Gokhan; Grosse-Wentrup, Moritz; Hothorn, Torsten; van Ligtenberg, Jules; Macke, Jakob H; Meyer, Timm; Schölkopf, Bernhard; Tran, Linh; Vaughan, Rubio; Stolovitzky, Gustavo; Leitner, Melanie L (2015). Crowdsourced analysis of clinical trial data to predict amyotrophic lateral sclerosis progression. Nature Biotechnology, 33(1):51-57.

Zurfluh, Katrin; Nüesch-Inderbinen, Magdalena; Morach, Marina; Zihler Berner, Annina; Stephan, Roger (2015). Extended-spectrum-β-lactamase-producing Enterobacteriaceae isolated from vegetables imported from the Dominican Republic, India, Thailand, and Vietnam. Applied and Environmental Microbiology, 81(9):3115-3120.

Stoller, Fabienne; Schlegel, Andrea; Viecelli, Hiu Man; Rüfenacht, Véronique; Cesarovic, Nikola; Viecelli, Claudio; Deplazes, Sereina; Bettschart-Wolfensberger, Regula; Hurter, Karin; Schmierer, Philipp A; Sidler, Xaver; Kron, Philipp; Dutkowski, Philipp; Graf, Rolf; Thöny, Beat; Häberle, Johannes (2015). Hepatocyte transfection in small pigs after weaning by hydrodynamic intraportal injection of naked DNA/minicircle vectors. Human Gene Therapy. Methods, 26(5):181-192.

Salcher, Michaela M; Ewert, Claudia; Šimek, Karel; Kasalický, Vojtěch; Posch, Thomas (2015). Interspecific competition and protistan grazing affect the coexistence of freshwater betaproteobacterial strains. FEMS Microbiology Ecology, 92(2):fiv156.

Herrmann, I K; Schlegel, A A; Graf, R; Stark, W J; Beck-Schimmer, Beatrice (2015). Magnetic separation-based blood purification: a promising new approach for the removal of disease-causing compounds? Journal of Nanobiotechnology, 13:49.

Guggisberg, Dominik; Schuetz, Philipp; Winkler, Hans; Amrein, Rudolf; Jakob, Ernst; Fröhlich-Wyder, Marie-Therese; Irmler, Stefan; Bisig, Walter; Jerjen, Iwan; Plamondon, Mathieu; Hofmann, Jürgen; Flisch, Alexander; Wechsler, Daniel (2015). Mechanism and control of the eye formation in cheese. International Dairy Journal, 47:118-127.

Hunziker, Lukas; Bönisch, Denise; Groenhagen, Ulrike; Bailly, Aurélien; Schulz, Stefan; Weisskopf, Laure (2015). Pseudomonas Strains Naturally Associated with Potato Plants Produce Volatiles with High Potential for Inhibition of Phytophthora infestans. Applied and Environmental Microbiology, 81(3):821-830.

Nüesch-Inderbinen, Magdalena; Cernela, N; Althaus, Denise; Hächler, Herbert; Stephan, Roger (2015). Salmonella enterica serovar Szentes, a rare serotype causing a 9-month outbreak in 2013 and 2014 in Switzerland. Foodborne Pathogens and Disease, 12(11):887-890.

Krismer, Jasmin; Sobek, Jens; Steinhoff, Robert F; Fagerer, Stephan R; Pabst, Martin; Zenobi, Renato (2015). Screening of Chlamydomonas reinhardtii Populations with Single-Cell Resolution by Using a High-Throughput Microscale Sample Preparation for Matrix-Assisted Laser Desorption Ionization Mass Spectrometry. Applied and Environmental Microbiology, 81(16):5546-5551.

Lardi, Martina; Aguilar, Claudio; Pedrioli, Alessandro; Omasits, Ulrich; Suppiger, Angela; Cárcamo-Oyarce, Gerardo; Schmid, Nadine; Ahrens, Christian H; Eberl, Leo; Pessi, Gabriella (2015). σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111. Applied and Environmental Microbiology, 81(12):4077-4089.

2014

Rimann, Markus; Laternser, Sandra; Gvozdenovic, Ana; Muff, Roman; Fuchs, Bruno; Kelm, Jens M; Graf-Hausner, Ursula (2014). An in vitro osteosarcoma 3D microtissue model for drug development. Journal of Biotechnology, 189:129-135.

Gekenidis, Maria-Theresia; Studer, Patrick; Wüthrich, Simone; Brunisholz, René; Drissner, David (2014). Beyond the matrix-assisted laser desorption ionization (MALDI) biotyping workflow: in search of microorganism-specific tryptic peptides enabling discrimination of subspecies. Applied and Environmental Microbiology, 80(14):4234-4241.

Dudnik, Alexey; Bigler, Laurent; Dudler, Robert (2014). Production of Proteasome Inhibitor Syringolin A by the Endophyte Rhizobium sp Strain AP16. Applied and Environmental Microbiology, 80(12):3741-3748.

Koch, M; Delmotte, N; Ahrens, C H; Omasits, U; Schneider, K; Danza, F; Padhi, B; Murset, V; Braissant, O; Vorholt, J A; Hennecke, H; Pessi, G (2014). A Link between Arabinose Utilization and Oxalotrophy in Bradyrhizobium japonicum. Applied and Environmental Microbiology, 80(7):2094-2101.

Schwanke, Kristin; Merkert, Sylvia; Kempf, Henning; Hartung, Susann; Jara-Avaca, Monica; Templin, Christian; Göhring, Gudrun; Haverich, Axel; Martin, Ulrich; Zweigerdt, Robert (2014). Fast and efficient multitransgenic modification of human pluripotent stem cells. Human Gene Therapy. Methods, 25(2):136-153.

Jost, Ted; Lacroix, Christophe; Braegger, Christian; Chassard, Christophe (2014). Stability of the maternal gut microbiota during late pregnancy and early lactation. Current Microbiology, 68(4):419-427.

Shabarova, Tanja; Villiger, Jörg; Morenkov, Oleg; Niggemann, Jutta; Dittmar, Thorsten; Pernthaler, Jakob (2014). Bacterial community structure and dissolved organic matter in repeatedly flooded subsurface karst water pools. FEMS Microbiology Ecology, 89(1):111-126.

Althaus, D; Lehner, Angelika; Brisse, S; Maury, M; Tasara, Taurai; Stephan, Roger (2014). Characterization of Listeria monocytogenes strains isolated during 2011-2013 from human infections in Switzerland. Foodborne Pathogens and Disease, 11(10):753-758.

Althaus, Denise Andrea. Characterization of Listeria monocytogenes strains isolated during 2011-2013 from human infections in Switzerland. 2014, University of Zurich, Vetsuisse Faculty.

Rongvaux, A; Willinger, T; Martinek, J; Strowig, T; Gearty, S V; Teichmann, L L; Saito, Y; Marches, F; Halene, S; Palucka, A K; Manz, M G; Flavell, R A (2014). Development and function of human innate immune cells in a humanized mouse model. Nature Biotechnology, 32(4):364-372.

Nissen, Lorenzo; Sgorbati, Barbara; Biavati, Bruno; Belibasakis, Georgios N (2014). Lactobacillus salivarius and Lactobacillus gasseri down-regulate Aggregatibacter actinomycetemcomitans exotoxins expression. Annals of Microbiology, 64(2):611-617.

Prohaska, Sarah; Pflueger, V; Scherrer, Simone; Frei, Daniel; Lehmann, Andreas; Wittenbrink, Max Michael; Huber, Helen (2014). MALDI-TOF MS for identification of porcine Brachyspira species. Letters in Applied Microbiology, 58(3):292-298.

Rutschmann, Christoph; Baumann, Stephan; Cabalzar, Jürg; Luther, Kelvin B; Hennet, Thierry (2014). Recombinant expression of hydroxylated human collagen in Escherichia coli. Applied Microbiology and Biotechnology, 98(10):4445-4455.

Agnoli, K; Frauenknecht, C; Freitag, R; Schwager, S; Jenul, C; Vergunst, A; Carlier, A; Eberl, L (2014). The third replicon of members of the Burkholderia cepacia complex, plasmid pC3, plays a role in stress tolerance. Applied and Environmental Microbiology, 80(4):1340-1348.

2013

Aerni, Philipp (2013). Resistance to agricultural biotechnology: The importance of distinguishing between weak and strong public attitudes. Biotechnology Journal, 8(10):1129-1132.

Brendel, C; Hänseler, Walther; Wohlgensinger, Vital; Bianchi, Matteo; Tokmak, Serap; Reichenbach, J; Seger, R; Siler, Ulrich (2013). Human miR223 promoter as a novel myelo-specific promoter for chronic granulomatous disease gene therapy. Human Gene Therapy. Methods, 24(3):151-159.

Diederich, Vincent E G; Studer, Peter; Kern, Anita; Lattuada, Marco; Storti, Giuseppe; Sharma, Ram I; Snedeker, Jess G; Morbidelli, Massimo (2013). Bioactive polyacrylamide hydrogels with gradients in mechanical stiffness. Biotechnology and Bioengineering, 110(5):1508-1519.

Vayena, Effy; Prainsack, Barbara (2013). The challenge of personal genomics in Germany. Nature Biotechnology, 31(1):16-17.

Peng, S; Schafroth, K; Jakob, E; Stephan, Roger; Hummerjohann, J (2013). Behaviour of Escherichia coli strains along the semi-hard and hard raw milk cheese production process. International Dairy Journal, 31(2):117-120.

Zurfluh, K; Hächler, Herbert; Nüesch-Inderbinen, Magdalena; Stephan, Roger (2013). Characteristics of extended-spectrum beta-lactamase (ESBL)- and carbapenemase-producing Enterobacteriaceae isolated from rivers and lakes in Switzerland. Applied and Environmental Microbiology, 79(9):3021-3026.

Gallati, Christine; Stephan, Roger; Hächler, Herbert; Malorny, Burkhard; Schroeter, Andreas; Nüesch-Inderbinen, Magdalena (2013). Characterization of Salmonella enterica serovar 4,[5],12:i:- clones isolated from human and other sources in Switzerland between 2007 and 2011. Foodborne Pathogens and Disease, 10(6):549-554.

Schärer, K; Stephan, Roger; Tasara, T (2013). Cold shock proteins contribute to the regulation of listeriolysin o production in listeria monocytogenes. Foodborne Pathogens and Disease, 10:1023-1029.

Schärer, K. Cold shock proteins contribute to the regulation of listeriolysin o production in listeria monocytogenes. 2013, University of Zurich, Vetsuisse Faculty.

Zweifel, C; Cernela, N; Stephan, Roger (2013). Detection of the emerging Shiga toxin-producing Escherichia coli O26:H11/H- sequence type 29 (ST29) clone in human patients and healthy cattle in Switzerland. Applied and Environmental Microbiology, 79(17):5411-5413.

Kovacevic, J; Arguedas-Villa, C; Wozniak, A; Tasara, T; Allen, K J (2013). Examination of food chain-derived L. monocytogenes of different serotypes reveals considerable diversity among inlA genotypes, mutability and adaptation to cold growth. Applied and Environmental Microbiology, 79:1915-1922.

Drummond, N; Stephan, Roger; Haughton, P; Murphy, B; Fanning, S (2013). Further characterization of three Yersinia enterocolitica strains with a nalidixic acid-resistant phenotype isolated from humans with diarrhea. Foodborne Pathogens and Disease, 10(8):744-746.

Ansell, Brendan R E; Schnyder, Manuela; Deplazes, Peter; Korhonen, Pasi K; Young, Neil D; Hall, Ross S; Mangiola, Stefano; Boag, Peter R; Hofmann, Andreas; Sternberg, Paul W; Jex, Aaron R; Gasser, Robin B (2013). Insights into the immuno-molecular biology of Angiostrongylus vasorum through transcriptomics-Prospects for new interventions. Biotechnology Advances, 31(8):1486-1500.

Stiefel, P; Zambelli, T; Vorholt, J A (2013). Isolation of optically targeted single bacteria by application of fluidic force microscopy to aerobic anoxygenic phototrophs from the phyllosphere. Applied and Environmental Microbiology, 79(16):4895-4905.

Johler, Sophia; Tichaczek-Dischinger, P; Rau, J; Sihto, H M; Lehner, Angelika; Adam, M; Stephan, Roger (2013). Outbreak of Staphylococcal food poisoning due to SEA-producing Staphylococcus aureus. Foodborne Pathogens and Disease, 10(9):777-781.

Vayena, Effy; Tasioulas, John (2013). The ethics of participant-led biomedical research. Nature Biotechnology, 31(9):786-787.

2012

Frei, Andreas P; Jeon, Ock-Youm; Kilcher, Samuel; Moest, Hansjoerg; Henning, Lisa M; Jost, Christian; Plückthun, Andreas; Mercer, Jason; Aebersold, Ruedi; Carreira, Erick M; Wollscheid, Bernd (2012). Direct identification of ligand-receptor interactions on living cells and tissues. Nature biotechnology, 30(10):997-1001.

Bodenmiller, Bernd; Zunder, Eli R; Finck, Rachel; Chen, Tiffany J; Savig, Erica S; Bruggner, Robert V; Simonds, Erin F; Bendall, Sean C; Sachs, Karen; Krutzik, Peter O; Nolan, Garry P (2012). Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators. Nature Biotechnology, 30(9):858-867.

Mülleder, Michael; Capuano, Floriana; Pir, Pınar; Christen, Stefan; Sauer, Uwe; Oliver, Stephen G; Ralser, Markus (2012). A prototrophic deletion mutant collection for yeast metabolomics and systems biology. Nature Biotechnology, 30(12):1176-1178.

Brengi, S; O'Brien, S B; Pichel, M; Iversen, Carol; Arduino, M; Binsztein, N; Jensen, B; Pagotto, F; Ribot, E; Stephan, Roger; Cernela, N; Cooper, K; Fanning, S (2012). Development and validation of a PulseNet standardized protocol for sub-typing isolates of Cronobacter species. Foodborne Pathogens and Disease, 9(9):861-867.

Niederer, L; Kuhnert, P; Egger, T; Büttner, S; Hächler, H; Korczak, B (2012). Genotypes and antibiotic resistances of Campylobacter jejuni and Campylobacter coli from domestic and travel-associated human cases. Applied and Environmental Microbiology, 78(1):288-291.

Hofer, E; Cernela, N; Stephan, Roger (2012). Shiga toxin subtypes associated with Shiga toxin-producing Escherichia coli strains isolated from red deer, roe deer, chamois and ibex. Foodborne Pathogens and Disease, 9(9):792-795.

2011

Wright, J; Bellissimi, E; de Hulster, E; Wagner, A; Pronk, J T; van Maris, A J A (2011). Batch and continuous culture-based selection strategies for acetic acid tolerance in xylose-fermenting Saccharomyces cerevisiae. FEMS Yeast Research, 11(3):299-306.

Huberts, Daphne H E W; Niebel, Bastian; Heinemann, Matthias (2011). A flux-sensing mechanism could regulate the switch between respiration and fermentation. FEMS Yeast Research, 12(2):118-128.

Duc, L; Neuenschwander, S; Rehrauer, H; Zeyer, J (2011). Application of a nifH microarray to assess the impact of environmental factors on free-living diazotrophs in a glacier forefield. Canadian Journal of Microbiology, 57(2):105-114.

Weisskopf, L; Heller, S; Eberl, L (2011). Burkholderia species are major inhabitants of white lupin cluster roots. Applied and Environmental Microbiology, 77(21):7715-7720.

Kittl, S; Kuhnert, P; Hächler, H; Korczak, B M (2011). Comparison of genotypes and antibiotic resistance of Campylobacter jejuni isolated from humans and slaughtered chickens in Switzerland. Journal of Applied Microbiology, 110(2):513-520.

Fredriksson-Ahomaa, M; Wacheck, S; Bonke, R; Stephan, Roger (2011). Different enteropathogenic Yersinia strains found in wild boars and domestic pigs. Foodborne Pathogens and Disease, 8(6):733-736.

Schönenberger, C; Schütz, A; Franco-Obregón, A; Zenobi-Wong, M (2011). Efficient electroporation of peptides into adherent cells: investigation of the role of mechano-growth factor in chondrocyte culture. Biotechnology Letters, 33(5):883-888.

Frey, Beat; Niklaus, Pascal A; Kremer, Johann; Lüscher, Peter; Zimmermann, Stephan (2011). Heavy-machinery traffic impacts methane emissions as well as methanogen abundance and community structure in oxic forest soils. Applied and Environmental Microbiology, 77(17):6060-6068.

Devi, V S; Mittl, P R E (2011). Monitoring the disulfide bond formation of a cysteine-rich repeat protein from Helicobacter pylori in the periplasm of Escherichia coli. Current Microbiology, 62(3):903-907.

Roschitzki, B; Schauer, S; Mittl, P R E (2011). Recognition of host proteins by Helicobacter cysteine-rich protein C. Current Microbiology, 63(3):239-249.

Soni, K A; Nannapaneni, R; Tasara, T (2011). The contribution of transcriptomic and proteomic analysis in elucidating stress adaptation responses of Listeria monocytogenes. Foodborne Pathogens and Disease, 8(8):843-852.

Besic Gyenge, E; Darphin, X; Walt, H; Maake, C (2011). Uptake and distribution of silica-shell nano particles in head-and-neck cancer cell lines. Journal of Nanobiotechnology, 9:32-45.

Blom, D; Fabbri, C; Eberl, L; Weisskopf, L (2011). Volatile-mediated killing of Arabidopsis thaliana by Bacteria is mainly due to hydrogen cyanide. Applied and Environmental Microbiology, 77(3):1000-1008.

2010

Hörtnagl, Paul; Pérez, Maria Teresa; Zeder, Michael; Sommaruga, Ruben (2010). The bacterial community composition of the surface microlayer in a high mountain lake. FEMS Microbiology Ecology, 73(3):458-467.

Zeder, M; Van den Wyngaert, S; Köster, O; Felder, K M; Pernthaler, J (2010). Automated quantification and sizing of unbranched filamentous cyanobacteria by model based object oriented image analysis. Applied and Environmental Microbiology, 76(5):1615-1622.

Mathes, S H; Wohlwend, L; Uebersax, L; von Mentlen, R; Thoma, D S; Jung, R E; Görlach, C; Graf-Hausner, U (2010). A bioreactor test system to mimic the biological and mechanical environment of oral soft tissues and to evaluate substitutes for connective tissue grafts. Biotechnology and Bioengineering, 107(6):1029-1039.

Kelm, J M; Lorber, V; Snedeker, J G; Schmidt, D; Broggini-Tenzer, A; Weisstanner, M; Odermatt, B; Mol, A; Zünd, G; Hoerstrup, S P (2010). A novel concept for scaffold-free vessel tissue engineering: self-assembly of microtissue building blocks. Journal of Biotechnology, 148(1):46-55.

Blom, J F; Pernthaler, J (2010). Antibiotic effects of three strains of chrysophytes (Ochromonas, Poterioochromonas) on freshwater bacterial isolates. FEMS Microbiology Ecology, 71(2):281-290.

Lumjiaktase, P; Aguilar, C; Battin, T; Riedel, K; Eberl, L (2010). Construction of self-transmissible green fluorescent protein-based biosensor plasmids and their use for identification of n-acyl homoserine-producing bacteria in lake sediments. Applied and Environmental Microbiology, 76(18):6119-6127.

Kümmel, Anne; Ewald, Jennifer Christina; Fendt, Sarah-Maria; Jol, Stefan Jasper; Picotti, Paola; Aebersold, Ruedi; Sauer, Uwe; Zamboni, Nicola; Heinemann, Matthias (2010). Differential glucose repression in common yeast strains in response to HXK2 deletion. FEMS Yeast Research, 10(3):322-332.

Hartmann, I; Carranza, P; Stephan, Roger; Lehner, Angelika; Eberl, L; Riedel, K (2010). Genes involved in Cronobacter sakazakii biofilm formation. Applied and Environmental Microbiology, 76(7):2251-2261.

Wadle, A; Mischo, A; Strahl, S; Nishikawa, H; Held, G; Neumann, F; Wullner, B; Fischer, E; Kleber, S; Karbach, J; Jager, E; Shiku, H; Odunsi, K; Shrikant, P A; Knuth, A; Cerundolo, V; Renner, C (2010). NY-ESO-1 protein glycosylated by yeast induces enhanced immune responses. FEMS Yeast Research, 27(11):919-931.

Steffen, W; Gemperli, A C; Cvetesic, N; Steuber, J (2010). Organelle-specific expression of subunit ND5 of human complex I (NADH dehydrogenase) alters cation homeostasis in Saccharomyces cerevisiae. FEMS Yeast Research, 10(6):648-659.

Loepfe, C; Raimann, E; Stephan, Roger; Tasara, T (2010). Reduced host cell invasiveness and oxidative stress tolerance in double and triple csp gene family deletion mutants of L. monocytogenes. Foodborne Pathogens and Disease, 7(7):775-783.

Blom, J F; Zimmermann, Y S; Ammann, T; Pernthaler, J (2010). Scent of danger: floc formation by a freshwater bacterium is induced by supernatants from a predator-prey coculture. Applied and Environmental Microbiology, 76(18):6156-6163.

Deng, Y; Wu, J; Eberl, L; Zhang, L H (2010). Structural and functional characterization of diffusible signal factor family quorum-sensing signals produced by members of the Burkholderia cepacia complex. Applied and Environmental Microbiology, 76(14):4675-4683.

Frey, Beat; Rieder, S R; Brunner, I; Plötze, M; Koetzsch, S; Lapanje, A; Brandl, H; Furrer, G (2010). Weathering-associated bacteria from the Damma glacier forefield: Physiological capabilities and impact on granite dissolution. Applied and Environmental Microbiology, 76(14):4788-4796.

Wacheck, S; Fredriksson-Ahomaa, M; Koenig, M; Stolle, A; Stephan, Roger (2010). Wild boars as an important reservoir for food-borne pathogens. Foodborne Pathogens and Disease, 7(3):307-312.

Johler, Sophia; Stephan, Roger; Hartmann, I; Kuehner, K A; Lehner, Angelika (2010). Yellow pigmentation in Cronobacter sakazakii ES5: Genes involved and influence on persistence and growth under environmental stress. Applied and Environmental Microbiology, 76(4):1053-1061.

2009

Gargis, S R; Gargis, A S; Heath, H E; Heath, L S; LeBlanc, P A; Senn, M M; Berger-Bächi, B; Simmonds, R S; Sloan, G L (2009). Zif, the zoocin A immunity factor, is a FemABX-like immunity protein with a novel mode of action. Applied and Environmental Microbiology, 75(19):6205-6210.

Steindler, L; Bertani, I; De Sordi, L; Schwager, S; Eberl, L; Venturi, V (2009). LasI/R and RhlI/R quorum sensing in a strain of Pseudomonas aeruginosa beneficial to plants. Applied and Environmental Microbiology, 75(15):5131-5140.

Felder, K M; Hoelzle, K; Wittenbrink, M M; Zeder, M; Ehricht, R; Hoelzle, L E (2009). A DNA microarray facilitates the diagnosis of Bacillus anthracis in environmental samples. Letters in Applied Microbiology, 49(3):324-331.

Boretti, Felicitas S; Perreten, A; Meli, Marina L; Cattori, V; Willi, Barbara; Wengi, N; Hornok, S; Honegger, H; Hegglin, D; Woelfel, R; Reusch, Claudia E; Lutz, H; Hofmann-Lehmann, R (2009). Molecular investigations of Rickettsia helvetica infection in dogs, foxes, humans and Ixodes ticks. Applied and Environmental Microbiology, 75(10):3230-3237.

Ganguli-Mitra, A; Schmidt, M; Torgersen, H; Deplazes-Zemp, Anna; Biller-Andorno, N (2009). Of Newtons and heretics. Nature Biotechnology, 27(4):321-322.

Müller, H; Westendorf, C; Leitner, E; Chernin, L; Riedel, K; Schmidt, S; Eberl, L; Berg, G (2009). Quorum-sensing effects in the antagonistic rhizosphere bacterium Serratia plymuthica HRO-C48. FEMS Microbiology Ecology, 67(3):468-478.

Schmid, B; Klumpp, J; Raimann, E; Loessner, M J; Stephan, Roger; Tasara, T (2009). Role of cold shock proteins in growth of Listeria monocytogenes under cold and osmotic stress conditions. Applied and Environmental Microbiology, 75(6):1621-1627.

Kawe, M; Horn, U; Plückthun, A (2009). Facile promoter deletion in Escherichia coli in response to leaky expression of very robust and benign proteins from common expression vectors. Microbial Cell Factories, 8:8.

Zihler, A; Le Blay, G; de Wouters, T; Lacroix, C; Braegger, C; Lehner, Angelika; Tischler, P; Rattei, T; Haechler, H; Stephan, Roger (2009). In vitro inhibition activity of different bacteriocin-producing E. coli against Salmonella strains isolated from clinical cases. Letters in Applied Microbiology, 49(1):31-38.

Stephan, Roger; Zhang, W; Bielaszewska, M; Mellmann, A; Karch, H (2009). Phenotypic and genotypic traits of Shiga toxin-negative E. coli O157:H7/H- bovine and porcine strains. Foodborne Pathogens and Disease, 6(2):235-243.

Raimann, E; Schmid, B; Stephan, Roger; Tasara, T (2009). The alternative sigma factor sigma(L) of L. monocytogenes promotes growth under diverse environmental stresses. Foodborne Pathogens and Disease, 6(5):583-591.

2008

Seeger, H; Julius, C; Cozzari, C; Calella, A M; Dattilo, M; Aguzzi, A (2008). Prion depletion and preservation of biological activity by preparative chaotrope ultracentrifugation. Biologicals, 36(6):403-411.

Cui, T; Gao, Y; Ang, C X; Puah, C M; Gutte, B; Lam, Y (2008). Hydrogen peroxide enhances enterokinase-catalysed proteolytic cleavage of fusion protein. Recent Patents on Biotechnology, 2(3):189-190.

Zurbriggen, S; Tobler, K; Abril, C; Diedrich, S; Ackermann, M; Pallansch, M A; Metzler, A (2008). Isolation of sabin-like polioviruses from wastewater in a country using inactivated polio vaccine. Applied and Environmental Microbiology, 74(18):5608-5614.

Rothballer, M; Eckert, B; Schmidt, M; Fekete, A; Schloter, M; Lehner, A; Pollmann, S; Hartmann, A (2008). Endophytic root colonization of gramineous plants by Herbaspirillum frisingense. FEMS Microbiology Ecology, (66):85-95.

Mullane, N R; O'Gaora, P; Nally, J E; Iversen, C; Whyte, P; Wall, P G; Fannning, S (2008). Molecular analysis of the Enterobacter sakazakii O-antigen gene locus. Applied and Environmental Microbiology, 74(12):3783-3794.

Allers, E; Niesner, C; Wild, C; Pernthaler, J (2008). Microbes enriched in seawater after addition of coral mucus. Applied and Environmental Microbiology, 74(10):3274-3278.

Iversen, C; Druggan, P; Schumacher, S; Lehner, Angelika; Feer, C; Gschwend, K; Joosten, H; Stephan, Roger (2008). Development of a novel screening method for the isolation of "Cronobacter" spp. (Enterobacter sakazakii). Applied and Environmental Microbiology, 74(8):2550-2553.

Thurnheer, T; Giertsen, E; Gmür, R; Guggenheim, B (2008). Cariogenicity of soluble starch in oral in vitro biofilm and experimental rat caries studies: a comparison. Journal of Applied Microbiology, 105(3):829-836.

Mullane, N R; Ryan, M; Iversen, C; Murphy, M; O'Gaora, P; Quinn, T; Whyte, P; Wall, P G; Fanning, C (2008). Development of multiple-locus variable-number tandem-repeat analysis for the molecular subtyping of Enterobacter sakazakii. Applied and Environmental Microbiology, 74(4):1223-1231.

Steinebrunner, F; Schiestl, F P; Leuchtmann, A (2008). Ecological role of volatiles produced by Epichloë: differences in antifungal toxicity. FEMS Microbiology Ecology, 64(2):307-316.

Alkadhi, H (2008). Morphology and beyond: CT of cardiac valves. Current Cardiovascular Imaging Reports, 1(2):141-148.

Bodenmiller, B; Campbell, D; Gerrits, B; Lam, H; Jovanovic, M; Picotti, P; Schlapbach, R; Aebersold, R (2008). PhosphoPep--a database of protein phosphorylation sites in model organisms. Nature Biotechnology, 26(12):1339-1340.

2007

Cui, T; Gao, Y; Liew, O W; Puah, C M; Gutte, B (2007). Efficient preparation of an acyclic permutant of kalata B1 from a recombinant fusion protein with thioredoxin. Journal of Biotechnology, 130(4):378-384.

Salcher, Michaela M; Hofer, Julia; Horňák, Karel; Jezbera, Jan; Sonntag, Bettina; Vrba, Jaroslav; Šimek, Karel; Posch, Thomas (2007). Modulation of microbial predator-prey dynamics by phosphorus availability: growth patterns and survival strategies of bacterial phylogenetic clades. FEMS Microbiology Ecology, 60(1):40-50.

Alonso-Sáez, Laura; Balagué, Vanessa; Sà, Elisabet L; Sanchez-Pernaute, Olga; González-Navajas, José M; Pinhassi, Jarone; Massana, Ramon; Pernthaler, Jakob; Pedrós-Alió, Carlos; Gasol, Josep M (2007). Seasonality in bacterial diversity in north-west Mediterranean coastal waters: assessment through clone libraries, fingerprinting and FISH. FEMS Microbiology Ecology, 60(1):98-112.

Brunner, E; Ahrens, C H; Mohanty, S; Baetschmann, H; Loevenich, S; Potthast, F; Deutsch, E W; Panse, C; de Lichtenberg, U; Rinner, O; Lee, H; Pedrioli, P G A; Malmstrom, J; Koehler, K; Schrimpf, S; Krijgsveld, J; Kregenow, F; Heck, A J R; Hafen, E; Schlapbach, R; Aebersold, R (2007). A high-quality catalog of the Drosophila melanogaster proteome. Nature Biotechnology, 25(5):576-583.

Willi, Barbara; Boretti, Felicitas S; Meli, Marina L; Bernasconi, Marco V; Casati, Simona; Hegglin, Daniel; Puorger, Maria; Neimark, Harold; Cattori, Valentino; Wengi, Nicole; Reusch, Claudia E; Lutz, Hans; Hofmann-Lehmann, R (2007). Real-time PCR investigation of potential vectors, reservoirs, and shedding patterns of feline hemotropic mycoplasmas. Applied and Environmental Microbiology, 73(12):3798-3802.

2006

Walsby, Anthony E; Jüttner, Friedrich (2006). The uptake of amino acids by the cyanobacterium Planktothrix rubescens is stimulated by light at low irradiances. FEMS Microbiology Ecology, 58(1):14-22.

van Loo, Bert; Kingma, Jaap; Arand, Michael; Wubbolts, Marcel G; Janssen, Dick B (2006). Diversity and biocatalytic potential of epoxide hydrolases identified by genome analysis. Applied and Environmental Microbiology, 72(4):2905-2917.

Gmür, R; Munson, M A; Wade, W G (2006). Genotypic and phenotypic characterization of fusobacteria from Chinese and European patients with inflammatory periodontal diseases. Systematic and Applied Microbiology, 29(2):120-130.

Marcotte, H; Kõll-Klais, P; Hultberg, A; Zhao, Y; Gmür, R; Mändar, R; Mikelsaar, M; Hammarström, L (2006). Expression of single-chain antibody against RgpA protease of Porphyromonas gingivalis in Lactobacillus. Journal of Applied Microbiology, 100(2):256-263.

Hilpertshauser, H; Deplazes, P; Schnyder, M; Gern, L; Mathis, A (2006). Babesia spp. Identified by PCR in Ticks Collected from Domestic and Wild Ruminants in Southern Switzerland. Applied and Environmental Microbiology, 72(10):6503-6507.

2005

Brandl, H; Bachofen, R; Bischoff, M (2005). Generation of bioaerosols during manual mail unpacking and sorting. Journal of Applied Microbiology, 99(5):1099-1107.

Schmoekel, H G; Weber, Franz E; Schense, J C; Grätz, K W; Schawalder, P; Hubbell, J A (2005). Bone repair with a form of BMP-2 engineered for incorporation into fibrin cell ingrowth matrices. Biotechnology and Bioengineering, 89(3):253-262.

Bögli-Stuber, K; Kohler, C; Seitert, G; Glanemann, B; Antognoli, M C; Salman, M D; Wittenbrink, M M; Wittwer, M; Wassenaar, T; Jemmi, T; Bissig-Choisat, B (2005). Detection of Mycobacterium avium subspecies paratuberculosis in Swiss dairy cattle by real-time PCR and culture: a comparison of the two assays. Journal of Applied Microbiology, 99(3):587-97.

Kelm, J M; Diaz Sanchez-Bustamante, C; Ehler, E; Hoerstrup, S P; Djonov, V; Ittner, L; Fussenegger, M (2005). VEGF profiling and angiogenesis in human microtissues. Journal of Biotechnology, 118(2):213-229.

2004

Pratt, A B; Weber, Franz E; Schmoekel, H G; Müller, R; Hubbell, J A (2004). Synthetic extracellular matrices for in situ tissue engineering. Biotechnology and Bioengineering, 86(1):27-36.

2003

Thurnheer, T; Gmür, R; Shapiro, S; Guggenheim, B (2003). Mass transport of macromolecules within an in vitro model of supragingival plaque. Applied and Environmental Microbiology, 69(3):1702-1709.

Pekarik, Vladimir; Bourikas, Dimitris; Miglino, N; Joset, P; Preiswerk, S; Stoeckli, E T (2003). Screening for gene function in chicken embryo using RNAi and electroporation. Nature Biotechnology, 21(1):93-96.

2001

Bernard, A; Fitzli, D; Sonderegger, P; Delamarche, E; Michel, B; Bosshard, H R; Biebuyck, H (2001). Affinity capture of proteins from solution and their dissociation by contact printing. Nature Biotechnology, 19(9):866-869.

Guggenheim, M; Shapiro, S; Gmür, R; Guggenheim, B (2001). Spatial arrangements and associative behavior of species in an in vitro oral biofilm model. Applied and Environmental Microbiology, 67(3):1343-1350.

2000

Bosshard, Philipp P; Santini, Yves; Grüter, Dominique; Stettler, Rolf; Bachofen, Reinhard (2000). Bacterial diversity and community composition in the chemocline of the meromictic alpine Lake Cadagno as revealed by 16S rDNA analysis. FEMS Microbiology Ecology, 31(2):173-182.

Gramatikova, Svetlana I; Christen, Philipp (2000). Pyridoxal-5'-phosphate-dependent catalytic antibodies. Applied Biochemistry and Biotechnology, 83(1-3):183-194.

1999

Waibel, R; Alberto, R; Willuda, J; Finnern, R; Schibli, R; Stichelberger, A; Egli, A; Abram, U; Mach, J P; Plückthun, A; Schubiger, P A (1999). Stable one-step technetium-99m labeling of His-tagged recombinant proteins with a novel Tc(I)-carbonyl complex. Nature Biotechnology, 17(9):897-901.

1996

Fischer, Carmen; Wiggli, Markus; Schanz, Ferdinand; Hanselmann, Kurt W; Bachofen, Reinhard (1996). Light environment and synthesis of bacteriochlorophyll by populations of Chromatium okenii under natural environmental conditions. FEMS Microbiology Ecology, 21(1):1-9.

This list was generated on Sat Apr 17 02:06:54 2021 CEST.