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2020

Moriyama, Miyu; Hugentobler, Walter J; Iwasaki, Akiko (2020). Seasonality of Respiratory Viral Infections. Annual Review of Virology, 7(1):annurev-virology-012420-022445.

Korzyukov, Yegor; Iheozor-Ejiofor, Rommel; Levanov, Lev; Smura, Teemu; Hetzel, Udo; Szirovicza, Leonora; de la Torre, Juan Carlos; Martinez-Sobrido, Luis; Kipar, Anja; Vapalahti, Olli; Hepojoki, Jussi (2020). Differences in tissue and species tropism of reptarenavirus species studied by vesicular stomatitis virus pseudotypes. Viruses, 12(4):E395.

Ertuğrul, Bülent; Uçkay, İlker; Schöni, Madlaina; Peter-Riesch, Bettina; Lipsky, Benjamin A (2020). Management of diabetic foot infections in the light of recent literature and new international guidelines. Expert Review of Anti-Infective Therapy, 18(4):293-305.

Szirovicza, Leonora; Hetzel, Udo; Kipar, Anja; Martinez-Sobrido, Luis; Vapalahti, Olli; Hepojoki, Jussi (2020). Snake deltavirus utilizes envelope proteins of different viruses to generate infectious particles. mBio, 11(2):e03250-19.

Shrestha, Neeta; Tobler, Kurt; Uster, Stephanie; Sigrist-Nagy, Romina; Hierweger, Melanie Michaela; Ackermann, Mathias (2020). Ovine herpesvirus 2 encodes a previously unrecognized protein, pOv8.25, that targets mitochondria and triggers apoptotic cell death. Journal of Virology, 94(8):Epub ahead of print.

Buttafuoco, Antonino; Michaelsen, Kevin; Tobler, Kurt; Ackermann, Mathias; Fraefel, Cornel; Eichwald, Catherine (2020). Conserved rotavirus NSP5 and VP2 domains interact and affect viroplasm. Journal of Virology, 94(7):e01965-19.

Karakus, Umut; Pohl, Marie O; Stertz, Silke (2020). Breaking the convention: Sialoglycan variants, Co-receptors and Alternative Receptors for Influenza A Virus Entry. Journal of Virology, 94(4):e01357-19.

2019

Nur, Selim; Sparber, Florian; Lemberg, Christina; Guiducci, Eva; Schweizer, Tiziano A; Zwicky, Pascale; Becher, Burkhard; LeibundGut-Landmann, Salomé (2019). IL-23 supports host defense against systemic Candida albicans infection by ensuring myeloid cell survival. PLoS Pathogens, 15(12):e1008115.

Malbon, Alexandra J; Fonfara, Sonja; Meli, Marina L; Hahn, Shelley; Egberink, Herman; Kipar, Anja (2019). Feline infectious peritonitis as a systemic inflammatory disease: contribution of liver and heart to the pathogenesis. Viruses, 11(12):E1144.

Münz, Christian (2019). The Role of Dendritic Cells in Immune Control and Vaccination against $y$-Herpesviruses. Viruses, 11(12):E1125.

Hernandez, Matthew M; Fahrny, Audrey; Jayaprakash, Anitha; Gers-Huber, Gustavo; Dillon-White, Marsha; Audigé, Annette; Mulder, Lubbertus C F; Sachidanandam, Ravi; Speck, Roberto F; Simon, Viviana (2019). Impact of suboptimal APOBEC3G neutralization on the emergence of HIV drug resistance in humanized mice. Journal of Virology, 94(5):0.

Buzibye, Allan; Musaazi, Joseph; von Braun, Amrei; Nanzigu, Sarah; Sekaggya-Wiltshire, Christine; Kambugu, Andrew; Fehr, Jan; Lamorde, Mohammed; Gutteck, Ursula; Muller, Daniel; Sowinski, Stefanie; Reynolds, Steven J; Castelnuovo, Barbara (2019). Antiretroviral concentration measurements as an additional tool to manage virologic failure in resource limited settings: a case control study. AIDS Research and Therapy, 16(1):39.

Work, Thierry M; Dagenais, Julie; Willimann, Anna; Balazs, George; Mansfield, Kate; Ackermann, Mathias (2019). Differences in antibody responses against Chelonid Alphaherpesvirus 5 (ChHV5) suggest differences in virus biology in ChHV5-seropositive green turtles from Hawaii and ChHV5-seropositive green turtles from Florida. Journal of Virology, 94(4):e01658-19.

Wambui, Joseph; Njage, Patrick Murigu Kamau; Tasara, Taurai; Buys, Elna Maria (2019). Meta-analysis and meta-regression indicate dynamic prevalence and moderators of foodborne pathogens in African indigenous fermented milk. Microorganisms, 7(11):E563.

Martinet, Jean-Philippe; Ferté, Hubert; Failloux, Anna-Bella; Schaffner, Francis; Depaquit, Jérôme (2019). Mosquitoes of North-Western Europe as potential vectors of Arboviruses: a review. Viruses, 11(11):E1059.

Studer, Nadine; Lutz, Hans; Saegerman, Claude; Gönczi, Enikő; Meli, Marina L; Boo, Gianluca; Hartmann, Katrin; Hosie, Margaret J; Moestl, Karin; Tasker, Séverine; Belák, Sándor; Lloret, Albert; Boucraut-Baralon, Corine; Egberink, Herman F; Pennisi, Maria-Grazia; Truyen, Uwe; Frymus, Tadeusz; Thiry, Etienne; Marsilio, Fulvio; Addie, Diane; Hochleithner, Manfred; Tkalec, Filip; Vizi, Zsuzsanna; Brunetti, Anna; Georgiev, Boyko; Ludwig-Begall, Louisa F; Tschuor, Flurin; Mooney, Carmel T; Eliasson, Catarina; Orro, Janne; Johansen, Helle; Juuti, Kirsi; Krampl, Igor; Kovalenko, Kaspars; Šengaut, Jakov; Sobral, Cristina; Borska, Petra; Kovaříková, Simona; Hofmann-Lehmann, Regina (2019). Pan-European study on the prevalence of the feline leukaemia virus infection - reported by the European Advisory Board on Cat Diseases (ABCD Europe). Viruses, 11(11):E993.

Spiri, Andrea Monika; Meli, Marina L; Riond, Barbara; Herbert, Imogen; Hosie, Margaret J; Hofmann-Lehmann, Regina (2019). Environmental contamination and hygienic measures after feline calicivirus field strain infections of cats in a research facility. Viruses, 11(10):E958.

Horlbog, Jule Anna; Stevens, Marc J A; Stephan, Roger; Guldimann, Claudia (2019). Global transcriptional response of three highly acid-tolerant field strains of listeria monocytogenes to HCl stress. Microorganisms, 7(10):E455.

Papa, Guido; Venditti, Luca; Arnoldi, Francesca; Schraner, Elisabeth M; Potgieter, Christiaan; Borodavka, Alexander; Eichwald, Catherine; Burrone, Oscar R (2019). Recombinant rotaviruses rescued by reverse genetics reveal the role of NSP5 hyperphosphorylation in the assembly of viral factories. Journal of Virology, 94(1):e01110-e01119.

Greber, Urs F; Flatt, Justin W (2019). Adenovirus Entry: From Infection to Immunity. Annual Review of Virology, 6(1):annurev-virology.

Martínez, José L; Arnoldi, Francesca; Schraner, Elisabeth M; Eichwald, Catherine; Silva-Ayala, Daniela; Lee, Eunjoo; Sztul, Elizabeth; Burrone, Óscar R; López, Susana; Arias, Carlos F (2019). The guanine nucleotide exchange factor GBF1 participates in rotavirus replication. Journal of Virology, 93(19):October 2019 Volume 93 Issue 19 e01062-19.

Hepojoki, Satu; Kareinen, Lauri; Strandin, Tomas; Vaheri, Antti; Holthöfer, Harry; Mustonen, Jukka; Mäkelä, Satu; Hedman, Klaus; Vapalahti, Olli; Hepojoki, Jussi (2019). Urine and free immunoglobulin light chains as analytes for serodiagnosis of hantavirus infection. Viruses, 11(9):E809.

Wensing, Annemarie M; Calvez, Vincent; Ceccherini-Silberstein, Francesca; Charpentier, Charlotte; Günthard, Huldrych F; Paredes, Roger; Shafer, Robert W; Richman, Douglas D (2019). 2019 update of the drug resistance mutations in HIV-1. Topics in Antiviral Medicine, 27(3):111-121.

Nigg, Aurélien; Brilhante, Michael; Dazio, Valentina; Clément, Mathieu; Collaud, Alexandra; Gobeli Brawand, Stefanie; Willi, Barbara; Endimiani, Andrea; Schuller, Simone; Perreten, Vincent (2019). Shedding of OXA-181 carbapenemase-producing Escherichia coli from companion animals after hospitalisation in Switzerland: an outbreak in 2018. Eurosurveillance, 24(39):1900071.

Novacco, Marilisa; Kohan, Neda Ranjbar; Stirn, Martina; Meli, Marina L; Díaz-Sánchez, Adrian Alberto; Boretti, Felicitas S; Hofmann-Lehmann, Regina (2019). Prevalence, geographic distribution, risk factors and co-infections of feline gammaherpesvirus infections in domestic cats in Switzerland. Viruses, 11(8):E721.

Radoshitzky, Sheli R; Buchmeier, Michael J; Charrel, Rémi N; Clegg, J Christopher S; Gonzalez, Jean-Paul J; Günther, Stephan; Hepojoki, Jussi; Kuhn, Jens H; Lukashevich, Igor S; Romanowski, Víctor; Salvato, Maria S; Sironi, Manuela; Stenglein, Mark D; de la Torre, Juan Carlos (2019). ICTV virus taxonomy profile: arenaviridae. Journal of General Virology, 100(8):1200-1201.

Frankenfeld, Julia; Meili, Theres; Meli, Marina L; Riond, Barbara; Helfer-Hungerbuehler, A Katrin; Bönzli, Eva; Pineroli, Benita; Hofmann-Lehmann, Regina (2019). Decreased sensitivity of the serological detection of feline immunodeficiency virus infection potentially due to imported genetic variants. Viruses, 11(8):E697.

Sonzogni, Olmo; Millard, Anne-Laure; Taveira, Aline; Schneider, Mårten K J; Duo, Li; Speck, Roberto F; Wulf, Gerburg M; Mueller, Nicolas J (2019). Efficient Human Cytomegalovirus Replication in Primary Endothelial Cells Is SOCS3 Dependent. Intervirology, 62(2):80-89.

Kaufmann, Cindy; Stalder, Hanspeter; Sidler, Xaver; Renzullo, Sandra; Gurtner, Corinne; Grahofer, Alexander; Schweizer, Matthias (2019). Long-term circulation of Atypical Porcine Pestivirus (APPV) within Switzerland. Viruses, 11(7):E653.

Kuivanen, Suvi; Levanov, Lev; Kareinen, Lauri; Sironen, Tarja; Jääskeläinen, Anne J; Plyusnin, Ilya; Zakham, Fathiah; Emmerich, Petra; Schmidt-Chanasit, Jonas; Hepojoki, Jussi; Smura, Teemu; Vapalahti, Olli (2019). Detection of novel tick-borne pathogen, Alongshan virus, in Ixodes ricinus ticks, south-eastern Finland, 2019. Eurosurveillance, 24(27):1900394.

Patel, Sameera; Sinigaglia, Alessandro; Barzon, Luisa; Fassan, Matteo; Sparber, Florian; LeibundGut-Landmann, Salomé; Ackermann, Mathias (2019). Role of NS1 and TLR3 in pathogenesis and immunity of WNV. Viruses, 11(7):603.

Abudurexiti, Abulikemu; Adkins, Scott; Alioto, Daniela; Alkhovsky, Sergey V; Avšič-Županc, Tatjana; Ballinger, Matthew J; Bente, Dennis A; Beer, Martin; Bergeron, Éric; Blair, Carol D; Briese, Thomas; Buchmeier, Michael J; Burt, Felicity J; Calisher, Charles H; Cháng, Chénchén; Charrel, Rémi N; Choi, Il Ryong; Clegg, J Christopher S; de la Torre, Juan Carlos; de Lamballerie, Xavier; Dèng, Fēi; Di Serio, Francesco; Digiaro, Michele; Drebot, Michael A; Duàn, Xiǎoméi; Ebihara, Hideki; Elbeaino, Toufic; Ergünay, Koray; Fulhorst, Charles F; Garrison, Aura R; et al (2019). Taxonomy of the order Bunyavirales: update 2019. Archives of Virology, 164(7):1949-1965.

Abela, Irene A; Kadelka, Claus; Trkola, Alexandra (2019). Correlates of broadly neutralizing antibody development. Current opinion in HIV and AIDS, 14(4):279-285.

Koliwer-Brandl, Hendrik; Knobloch, Paulina; Barisch, Caroline; Welin, Amanda; Hanna, Nabil; Soldati, Thierry; Hilbi, Hubert (2019). Distinct Mycobacterium marinum phosphatases determine pathogen vacuole phosphoinositide pattern, phagosome maturation, and escape to the cytosol. Cellular Microbiology, 21(6):e13008.

Ramsauer, Anna Sophie; Kubacki, Jakub; Favrot, Claude; Ackermann, Mathias; Fraefel, Cornel; Tobler, Kurt (2019). RNA-seq analysis in equine papillomavirus type 2-positive carcinomas identifies affected pathways and potential cancer markers as well as viral gene expression and splicing events. Journal of General Virology, 100(6):985-998.

Schädler, Julia; Sigrist, Brigitte; Meier, Simone Martina; Albini, Sarah; Wolfrum, Nina (2019). Virus-like particles in a new vaccination approach against infectious laryngotracheitis. Journal of General Virology, 100(6):1013-1026.

Arnold, Isabelle C; Zhang, Xiaozhou; Artola-Boran, Mariela; Fallegger, Angela; Sander, Peter; Johansen, Pål; Müller, Anne (2019). BATF3-dependent dendritic cells drive both effector and regulatory T-cell responses in bacterially infected tissues. PLoS Pathogens, 15(6):e1007866.

Westman, Mark; Norris, Jacqueline; Malik, Richard; Hofmann-Lehmann, Regina; Harvey, Andrea; McLuckie, Alicia; Perkins, Martine; Schofield, Donna; Marcus, Alan; McDonald, Mike; Ward, Michael; Hall, Evelyn; Sheehy, Paul; Hosie, Margaret (2019). The diagnosis of Feline Leukaemia Virus (FeLV) infection in owned and group-housed rescue cats in Australia. Viruses, 11(6):E503.

Tall, Ben D; Gopinath, Gopal; Gangiredla, Jayanthi; Patel, Isha R; Fanning, Séamus; Lehner, Angelika (2019). Cronobacter Species. In: Doyle, MP; Diez-Gonzales, R; Hill, C. Food Microbiology: Fundamentals and Frontiers. Washington, 389-414.

Di Giallonardo, Francesca; Pinto, Angie N; Keen, Phillip; Shaik, Ansari; Carrera, Alex; Salem, Hanan; Telfer, Barbara; Cooper, Craig; Price, Karen; Selvey, Christine; Holden, Joanne; Bachmann, Nadine; Lee, Frederick J; Dwyer, Dominic E; Duchêne, Sebastián; Holmes, Edward C; Grulich, Andrew E; Kelleher, Anthony D (2019). Limited Sustained Local Transmission of HIV-1 CRF01_AE in New South Wales, Australia. Viruses, 11(5):482.

Wambui, Joseph; Stephan, Roger (2019). Relevant aspects of Clostridium estertheticum as a specific spoilage organism of vacuum-packed meat. Microorganisms, 7(5):E142.

Ghazaryan, Hrachuhi; Babloyan, Ara; Sarkissian, Ashot; Davtyan, Karapet; Berger, Christoph (2019). Respiratory syncytial and influenza virus detecting rapid tests in children younger than 5 years of age in Armenia. Journal of Infection in Developing Countries, 13(05.1):075S-080S.

Carroll, Laura M; Gaballa, Ahmed; Guldimann, Claudia; Sullivan, Genevieve; Henderson, Lory O; Wiedmann, Martin (2019). Identification of novel mobilized colistin resistance gene mcr-9 in a multidrug-resistant, colistin-susceptible salmonella enterica serotype typhimurium isolate. mBio, 10(3):e00853-19.

Chatterjee, Bithi; Deng, Yun; Holler, Angelika; Nunez, Nicolas; Azzi, Tarik; Vanoaica, Liliana Danusia; Müller, Anne; Zdimerova, Hana; Antsiferova, Olga; Zbinden, Andrea; Capaul, Riccarda; Dreyer, Johannes H; Nadal, David; Becher, Burkhard; Robinson, Mark D; Stauss, Hans; Münz, Christian (2019). CD8+ T cells retain protective functions despite sustained inhibitory receptor expression during Epstein-Barr virus infection in vivo. PLoS Pathogens, 15(5):e1007748.

Euler, Zelda; Van Den Kerkhof, Tom L; Kouyos, Roger D; Tully, Damien C; Allen, Todd M; Trkola, Alexandra; Sanders, Rogier W; Schuitemaker, Hanneke; Van Gils, Marit J (2019). Lower Broadly Neutralizing Antibody Responses in Female Versus Male HIV-1 Infected Injecting Drug Users. Viruses, 11(4):E384.

Hetzel, Udo; Szirovicza, Leonóra; Smura, Teemu; Prähauser, Barbara; Vapalahti, Olli; Kipar, Anja; Hepojoki, Jussi (2019). Identification of a novel deltavirus in Boa Constrictors. mBio, 10(2):e00014-e00019.

Altobelli, Aleksandra; Bauer, Michael; Velez, Karelia; Cover, Timothy L; Müller, Anne (2019). VacA Targets Myeloid Cells in the Gastric Lamina Propria To Promote Peripherally Induced Regulatory T-Cell Differentiation and Persistent Infection. mBio, 10(2):e00261-19.

Mulder, Annemieke Christine; Kroneman, Annelies; Franz, Eelco; Vennema, Harry; Tulen, Anna D; Takkinen, Johanna; Hofhuis, Agnetha; Adlhoch, Cornelia (2019). HEVnet: a One Health, collaborative, interdisciplinary network and sequence data repository for enhanced hepatitis E virus molecular typing, characterisation and epidemiological investigations. Eurosurveillance, 24(10):pii=1800407.

Vogler, Barbara; Hartnack, Sonja; Ziegler, Ute; Lelli, Davide; Vögtlin, Andrea; Hoop, Richard; Albini, Sarah (2019). Resource-effective serosurveillance for the detection of West Nile Virus in Switzerland using abattoir samples of free-range laying hens. Vector Borne and Zoonotic Diseases, 19(3):222-224.

Sparber, Florian; De Gregorio, Corinne; Steckholzer, Simone; Ferreira, Filipa M; Dolowschiak, Tamas; Ruchti, Fiorella; Kirchner, Florian R; Mertens, Sarah; Prinz, Immo; Joller, Nicole; Buch, Thorsten; Glatz, Martin; Sallusto, Federica; LeibundGut-Landmann, Salomé (2019). The skin commensal yeast malassezia triggers a type 17 response that coordinates anti-fungal immunity and exacerbates skin inflammation. Cell Host & Microbe, 25(3):389-403.e6.

Graul, Małgorzata; Kisielnicka, Edyta; Rychłowski, Michał; Verweij, Marieke C; Tobler, Kurt; Ackermann, Mathias; Wiertz, Emmanuel J H J; Bieńkowska-Szewczyk, Krystyna; Lipińska, Andrea D (2019). Transmembrane regions of bovine herpesvirus 1-encoded UL49.5 and glycoprotein M regulate complex maturation and ER-Golgi trafficking. Journal of General Virology, 100(3):497-510.

Buckley, Catherine M; Heath, Victoria L; Guého, Aurélie; Bosmani, Cristina; Knobloch, Paulina; Sikakana, Phumzile; Personnic, Nicolas; Dove, Stephen K; Michell, Robert H; Meier, Roger; Hilbi, Hubert; Soldati, Thierry; Insall, Robert H; King, Jason S (2019). PIKfyve/Fab1 is required for efficient V-ATPase and hydrolase delivery to phagosomes, phagosomal killing, and restriction of Legionella infection. PLoS Pathogens, 15(2):e1007551.

Gautret, Philippe; Grobusch, Martin P; Schlagenhauf, Patricia (2019). Where do Eritrean migrants get infected with malaria? The importance of considering the migration route. Eurosurveillance, 24(6):pii=1900095.

Murer, Anita; Rühl, Julia; Zbinden, Andrea; Capaul, Riccarda; Hammerschmidt, Wolfgang; Chijioke, Obinna; Münz, Christian (2019). MicroRNAs of Epstein-Barr Virus Attenuate T-Cell-Mediated Immune Control In Vivo. mBio, 10:e01941-18.

Delecluse, Susanne; Tsai, Ming-Han; Shumilov, Anatoliy; Bencun, Maja; Arrow, Sebastian; Beshirova, Aisha; Cottignies-Calamarte, Andréa; Lasitschka, Felix; Bulut, Olcay Cem; Münz, Christian; Zeier, Martin; Behrends, Uta; Delecluse, Henri-Jacques (2019). The Epstein-Barr virus induces the expression of the LPAM-1 integrin in B-cells in vitro and in vivo. Journal of Virology, 93(5):e01618-18.

2018

Rochat, Mary-Aude; Schlaepfer, Erika; Kuster, Stefan P; Li, Duo; Audige, Annette; Ivic, Sandra; Fahrny, Audrey; Speck, Roberto F (2018). Monitoring HIV DNA and cellular activation markers in HIV-infected humanized mice under cART. Virology Journal, 15:191.

Weber, Stephen; Steiner, Bernhard; Welin, Amanda; Hilbi, Hubert (2018). Legionella-Containing Vacuoles Capture PtdIns(4)-Rich Vesicles Derived from the Golgi Apparatus. mBio, 9(6):pii: e02420-18.

Knauf, Sascha; Gogarten, Jan F; Schuenemann, Verena J; De Nys, Hélène M; et al (2018). Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp. pertenue. Emerging Microbes and Infections, 7(1):157.

Gomes, Margarida C; Tasrini, Yara; Subramoni, Sujatha; Agnoli, Kirsty; Feliciano, Joana R; Eberl, Leo; Sokol, Pamela; O'Callaghan, David; Vergunst, Annette C (2018). The afc antifungal activity cluster, which is under tight regulatory control of ShvR, is essential for transition from intracellular persistence of Burkholderia cenocepacia to acute pro-inflammatory infection. PLoS Pathogens, 14(12):e1007473.

Keller, Annika; Nuvolone, Mario; Abakumova, Irina; Chincisan, Andra; Reimann, Regina; Avar, Merve; Heinzer, Daniel; Hornemann, Simone; Wagner, Josephin; Kirschenbaum, Daniel; Voigt, Fabian F; Zhu, Caihong; Regli, Luca; Helmchen, Fritjof; Aguzzi, Adriano (2018). Prion pathogenesis is unaltered in a mouse strain with a permeable blood-brain barrier. PLoS Pathogens, 14(11):e1007424.

Keiser, O; Giudici, F; Müllhaupt, B; Junker, C; Dufour, J-F; Moradpour, D; Bruggmann, P; Terziroli, B; Semela, D; Brezzi, M; Bertisch, B; Estill, J; Negro, F; Spoerri, A; Swiss Hepatitis C Cohort Study; Swiss National Cohort Study Group (2018). Trends in hepatitis C-related mortality in Switzerland. Journal of Viral Hepatitis, (2):152-160.

Squarzanti, Diletta Francesca; Sorrentino, Rita; Landini, Manuela Miriam; Chiesa, Andrea; Pinato, Sabrina; Rocchio, Francesca; Mattii, Martina; Penengo, Lorenza; Azzimonti, Barbara (2018). Human papillomavirus type 16 E6 and E7 oncoproteins interact with the nuclear p53-binding protein 1 in an in vitro reconstructed 3D epithelium: new insights for the virus-induced DNA damage response. Virology Journal, 15(1):176.

Hepojoki, Jussi; Hepojoki, Satu; Smura, Teemu; Szirovicza, Leonóra; Dervas, Eva; Prähauser, Barbara; Nufer, Lisbeth; Schraner, Elisabeth M; Vapalahti, Olli; Kipar, Anja; Hetzel, Udo (2018). Characterization of Haartman Institute snake virus-1 (HISV-1) and HISV-like viruses—The representatives of genus Hartmanivirus, family Arenaviridae. PLoS Pathogens, 14(11):e1007415.

Bardelli, Marco; Frontzek, Karl; Simonelli, Luca; Hornemann, Simone; Pedotti, Mattia; Mazzola, Federica; Carta, Manfredi; Eckhardt, Valeria; D’Antuono, Rocco; Virgilio, Tommaso; González, Santiago F; Aguzzi, Adriano; Varani, Luca (2018). A bispecific immunotweezer prevents soluble PrP oligomers and abolishes prion toxicity. PLoS Pathogens, 14(10):e1007335.

Haller, Otto; Arnheiter, Heinz; Pavlovic, Jovan; Staeheli, Peter (2018). The Discovery of the Antiviral Resistance Gene Mx: A Story of Great Ideas, Great Failures, and Some Success. Annual Review of Virology, 5(1):33-51.

Cernikova, Lenka; Faso, Carmen; Hehl, Adrian B (2018). Five facts about Giardia lamblia. PLoS Pathogens, 14(9):e1007250.

Cook, Helen Victoria; Doncheva, Nadezhda Tsankova; Szklarczyk, Damian; von Mering, Christian; Jensen, Lars Juhl (2018). Viruses.STRING: A Virus-Host Protein-Protein Interaction Database. Viruses, 10(10):519.

Roulin, Pascal S; Murer, Luca P; Greber, Urs F (2018). A single point mutation in the rhinovirus 2B protein reduces the requirement for phosphatidylinositol 4-kinase class 3beta in viral replication. Journal of Virology, 92(23):e01462-18.

Maes, Piet; Alkhovsky, Sergey V; Bào, Yīmíng; Beer, Martin; Birkhead, Monica; Briese, Thomas; Buchmeier, Michael J; Calisher, Charles H; Charrel, Rémi N; Choi, Il Ryong; Clegg, Christopher S; de la Torre, Juan Carlos; Delwart, Eric; DeRisi, Joseph L; Di Bello, Patrick L; Di Serio, Francesco; Digiaro, Michele; Dolja, Valerian V; Drosten, Christian; Druciarek, Tobiasz Z; Du, Jiang; Ebihara, Hideki; Elbeaino, Toufic; Gergerich, Rose C; Gillis, Amethyst N; Gonzalez, Jean-Paul J; Haenni, Anne-Lise; Hepojoki, Jussi; Hetzel, Udo; Hồ, Thiện; et al (2018). Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018. Archives of Virology, 163(8):2295-2310.

Goossens, N; de Vito, C; Mangia, A; Clément, S; Cenderello, G; Barrera, F; D'Ambrosio, R; Coppola, N; Zampino, R; Stanzione, M; Adinolfi, L E; Wedemeyer, H; Semmo, N; Müllhaupt, B; Semela, D; Malinverni, R; Moradpour, D; Heim, M; Trincucci, G; Rubbia-Brandt, L; Negro, F; BOSTIC Study Group (2018). Effect of hepatitis B virus on steatosis in hepatitis C virus co-infected subjects: A multi-centre study and systematic review. Journal of Viral Hepatitis, 25(8):920-929.

Subbaraman, Harini; Schanz, Merle; Trkola, Alexandra (2018). Broadly neutralizing antibodies: What is needed to move from a rare event in HIV-1 infection to vaccine efficacy? Retrovirology, 15(1):52.

Eshwar, Athmanya Konegadde; Wolfrum, Nina; Stephan, R; Fanning, Séamus; Lehner, Angelika (2018). Interaction of matrix metalloprotease-9 and Zpx in Cronobacter turicensis LMG 23827T mediated infections in the zebrafish model. Cellular Microbiology, 20(11):e12888.

Ryom, Lene; Lundgren, Jens D; El-Sadr, Wafaa; Reiss, Peter; Kirk, Ole; Law, Matthew; Phillips, Andrew; Weber, Rainer; Fontas, Eric; d' Arminio Monforte, Antonella; De Wit, Stéphane; Dabis, Francois; Hatleberg, Camilla I; Sabin, Caroline; Mocroft, Amanda (2018). Cardiovascular disease and use of contemporary protease inhibitors: the D:A:D international prospective multicohort study. The lancet. HIV., 5(6):e291-e300.

Schuenemann, Verena J; Avanzi, Charlotte; Krause-Kyora, Ben; Seitz, Alexander; Herbig, Alexander; Inskip, Sarah; Bonazzi, Marion; Reiter, Ella; Urban, Christian; Dangvard Pedersen, Dorthe; Taylor, G Michael; Singh, Pushpendra; Stewart, Graham R; Velemínský, Petr; Likovsky, Jakub; Marcsik, Antónia; Molnár, Erika; Pálfi, György; Mariotti, Valentina; Riga, Alessandro; Belcastro, M Giovanna; Boldsen, Jesper L; Nebel, Almut; Mays, Simon; Donoghue, Helen D; Zakrzewski, Sonia; Benjak, Andrej; Nieselt, Kay; Cole, Stewart T; Krause, Johannes (2018). Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe. PLoS Pathogens, 14(5):e1006997.

Laut, Kamilla; Shepherd, Leah; Radoi, Roxana; Karpov, Igor; Parczewski, Milosz; Mussini, Cristina; Maltez, Fernando; Losso, Marcelo; Chkhartishvili, Nikoloz; Elinav, Hila; Kovari, Helen; et al (2018). Persistent disparities in antiretroviral treatment (ART) coverage and virological suppression across Europe, 2004 to 2015. Eurosurveillance, 23(21):1700382.

Witte, Robert; Andriasyan, Vardan; Georgi, Fanny; Yakimovich, Artur; Greber, Urs F (2018). Concepts in Light Microscopy of Viruses. Viruses, 10(4):E202.

Murer, Anita; McHugh, Donal; Caduff, Nicole; Kalchschmidt, Jens; Barros, Mario; Zbinden, Andrea; Capaul, Riccarda; Niedobitek, Gerald; Allday, Martin; Chijioke, Obinna; Münz, Christian (2018). EBV persistence without its EBNA3A and 3C oncogenes in vivo. PLoS Pathogens, 14(4):e1007039.

Wang, I-Hsuan; Burckhardt, Christoph J; Yakimovich, Artur; Greber, Urs F (2018). Imaging, Tracking and Computational Analyses of Virus Entry and Egress with the Cytoskeleton. Viruses, 10(4):1-31.

Gossner, Céline M; Haussig, Joana M; de Bellegarde de Saint Lary, Chiara; Kaasik Aaslav, Kaja; Schlagenhauf, Patricia; Sudre, Bertrand (2018). Increased risk of yellow fever infections among unvaccinated European travellers due to ongoing outbreak in Brazil, July 2017 to March 2018. Eurosurveillance, 23(11):online.

Stichling, Nicole; Suomalainen, Maarit; Flatt, Justin W; Schmid, Markus; Pacesa, Martin; Hemmi, Silvio; Jungraithmayr, Wolfgang; Maler, Mareike D; Freudenberg, Marina A; Plückthun, Andreas; May, Tobias; Köster, Mario; Fejer, György; Greber, Urs F (2018). Lung macrophage scavenger receptor SR-A6 (MARCO) is an adenovirus type-specific virus entry receptor. PLoS Pathogens, 14(3):e1006914.

Morger, Damien; Zosel, Franziska; Bühlmann, Martin; Züger, Sara; Mittelviefhaus, Maximilian; Schuler, Benjamin; Luban, Jeremy; Grütter, Markus G (2018). The Three-Fold Axis of the HIV-1 Capsid Lattice Is the Species-Specific Binding Interface for TRIM5α. Journal of Virology, 92(5):e01541-17.

Stertz, Silke; Paul Duprex, W; Harris, Mark (2018). A novel mutation in the neuraminidase gene of the 2009 pandemic H1N1 influenza A virus confers multidrug resistance. Journal of General Virology, 99(3):275-276.

Eichwald, Catherine; Ackermann, Mathias; Nibert, Max L (2018). The dynamics of both filamentous and globular mammalian reovirus viral factories rely on the microtubule network. Virology, 518:77-86.

Kühnert, Denise; Kouyos, Roger; Shirreff, George; Pečerska, Jūlija; Scherrer, Alexandra U; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Günthard, Huldrych F; Stadler, Tanja; Bonhoeffer, Sebastian; Swiss HIV Cohort Study (2018). Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics. PLoS Pathogens, 14(2):e1006895.

Slekiene, Jurgita; Mosler, Hans-Joachim (2018). Characterizing the Last Latrine Nonowners in Rural Malawi. American Journal of Tropical Medicine and Hygiene, 98(1):295-299.

Meli, Marina L; Berger, A; Willi, Barbara; Spiri, Andrea Monika; Riond-Schade, Barbara; Hofmann-Lehmann, Regina (2018). Molecular detection of feline calicivirus in clinical samples: a study comparing its detection by RT-qPCR directly from swabs and after virus isolation. Journal of Virological Methods, 251:54-60.

Reh, Lucia; Magnus, Carsten; Kadelka, Claus; Kühnert, Denise; Uhr, Therese; Weber, Jacqueline; Morris, Lynn; Moore, Penny L; Trkola, Alexandra (2018). Phenotypic deficits in the HIV-1 envelope are associated with the maturation of a V2-directed broadly neutralizing antibody lineage. PLoS Pathogens, 14:e1006825.

Trejo-Cerro, Óscar; Eichwald, Catherine; Schraner, Elisabeth M; Silva-Ayala, Daniela; López, Susana; Arias, Carlos F (2018). Actin-dependent non-lytic rotavirus exit and infectious virus morphogenetic pathway in non-polarized cells. Journal of Virology, 92(6):e02076-17.

Brozy, Johannes; Schlaepfer, Erika; Mueller, Christina K S; Rochat, Mary-Aude; Rampini, Silvana K; Myburgh, Renier; Raum, Tobias; Kufer, Peter; Baeuerle, Patrick A; Muenz, Markus; Speck, Roberto F (2018). Antiviral Activity of HIV gp120-Targeting Bispecific T Cell Engager Antibody Constructs. Journal of Virology, 92(14):1-13.

Rota, Rosana P; Palacios, Carlos A; Temprana, C Facundo; Argüelles, Marcelo H; Mandile, Marcelo G; Mattion, Nora; Laimbacher, Andrea S; Fraefel, Cornel; Castello, Alejandro A; Glikmann, Graciela (2018). Evaluation of the immunogenicity of a recombinant HSV-1 vector expressing human group C rotavirus VP6 protein. Journal of Virological Methods, 256:24-31.

Gopinath, G R; Chase, H R; Gangiredla, J; Eshwar, A; Jang, H; Patel, I; Negrete, F; Finkelstein, S; Park, E; Chung, T J; Yoo, Y J; Woo, J H; Lee, Y Y; Park, J; Choi, H; Jeong, S; Jun, S; Kim, M; Lee, C; Jeong, H; Fanning, S; Stephan, R; Iversen, C; Reich, F; Klein, G; Lehner, Angelika; Tall, B D (2018). Genomic characterization of malonate positive Cronobacter sakazakii serotype O:2, sequence type 64 strains, isolated from clinical, food, and environment samples. Gut Pathogens, 10:11.

Koch, C; Ramsauer, A S; Drögemüller, M; Ackermann, M; Gerber, V; Tobler, K (2018). Genomic comparison of bovine papillomavirus 1 isolates from bovine, equine and asinine lesional tissue samples. Virus Research, 244:6-12.

Meir, Juliane; Hartmann, Elena; Eckstein, Marie-Therese; Guiducci, Eva; Kirchner, Florian; Rosenwald, Andreas; LeibundGut-Landmann, Salomé; Pérez, J. Christian (2018). Identification of Candida albicans regulatory genes governing mucosal infection. Cellular Microbiology, 20(8):e12841.

Eichwald, Catherine; De Lorenzo, Giuditta; Schraner, Elisabeth M; Papa, Guido; Bollati, Michela; Swuec, Paolo; de Rosa, Matteo; Milani, Mario; Mastrangelo, Eloise; Ackermann, Mathias; Burrone, Oscar R; Arnoldi, Francesca (2018). Identification of a small molecule that compromises the structural integrity of viroplasms and rotavirus double-layered particles. Journal of Virology, 92(3):e01943-17.

Sparber, Florian; Dolowschiak, Tamas; Mertens, Sarah; Lauener, Laura; Clausen, Björn E; Joller, Nicole; Stoitzner, Patrizia; Tussiwand, Roxane; LeibundGut-Landmann, Salomé (2018). Langerin+ DCs regulate innate IL-17 production in the oral mucosa during Candida albicans-mediated infection. PLoS Pathogens, 14(5):e1007069.

Salazar-Vizcaya, L; Kouyos, R D; Fehr, J; Braun, D; Estill, J; Bernasconi, E; Delaloye, J; Stöckle, M; Schmid, P; Rougemont, M; Wandeler, G; Günthard, H F; Keiser, O; Rauch, A; Swiss HIV Cohort Study (2018). On the potential of a short-term intensive intervention to interrupt HCV transmission in HIV-positive men who have sex with men: A mathematical modelling study. Journal of Viral Hepatitis, 25(1):10-18.

Perraki, Artemis; Gronnier, Julien; Gouguet, Paul; Boudsocq, Marie; Deroubaix, Anne-Flore; Simon, Vincent; German-Retana, Sylvie; Legrand, Anthony; Habenstein, Birgit; Zipfel, Cyril; Bayer, Emmanuelle; Mongrand, Sébastien; Germain, Véronique (2018). REM1.3's phospho-status defines its plasma membrane nanodomain organization and activity in restricting PVX cell-to-cell movement. PLoS Pathogens, 14(11):e1007378.

Turkington, H L; Juozapaitis, M; Tsolakos, N; Corrales-Aguilar, E; Schwemmle, M; Hale, B G (2018). Unexpected Functional Divergence of Bat Influenza Virus NS1 Proteins. Journal of Virology, 92(5):e02097-17.

2017

Wensing, Annemarie M; Calvez, Vincent; Günthard, Huldrych F; Johnson, Victoria A; Paredes, Roger; Pillay, Deenan; Shafer, Robert W; Richman, Douglas D (2017). 2017 Update of the Drug Resistance Mutations in HIV-1. Topics in Antiviral Medicine, 24(4):132-133.

Goniotaki, Despoina; Lakkaraju, Asvin K K; Shrivastava, Amulya N; Bakirci, Pamela; Sorce, Silvia; Senatore, Assunta; Marpakwar, Rajlakshmi; Hornemann, Simone; Gasparini, Fabrizio; Triller, Antoine; Aguzzi, Adriano (2017). Inhibition of group-I metabotropic glutamate receptors protects against prion toxicity. PLoS Pathogens, 13(11):e1006733.

Filoni, Claudia; Helfer-Hungerbuehler, A Katrin; Catão-Dias, José Luiz; Marques, Mara Cristina; Torres, Luciana Neves; Reinacher, Manfred; Hofmann-Lehmann, Regina (2017). Putative progressive and abortive feline leukemia virus infection outcomes in captive jaguarundis (Puma yagouaroundi). Virology Journal, 14(1):226.

Münz, Christian (2017). Autophagy Proteins in Viral Exocytosis and Anti-Viral Immune Responses. Viruses, 9(10):E288.

Lopes, A M; Domingues, P; Zell, R; Hale, B G (2017). Structure-Guided Functional Annotation of the Influenza A Virus NS1 Protein Reveals Dynamic Evolution of the p85β-Binding Site during Circulation in Humans. Journal of Virology, 91(21):e01081-17.

Escoll, Pedro; Song, Ok-Ryul; Viana, Flávia; Steiner, Bernhard; Lagache, Thibault; Olivo-Marin, Jean-Christophe; Impens, Francis; Brodin, Priscille; Hilbi, Hubert; Buchrieser, Carmen (2017). Legionella pneumophila Modulates Mitochondrial Dynamics to Trigger Metabolic Repurposing of Infected Macrophages. Cell Host & Microbe, 22(3):302-316.e7.

Niewoehner, Ole; Jinek, Martin (2017). Specialized weaponry: how a type III-A CRISPR-cas system excels at combating phages. Cell Host & Microbe, 22(3):258-259.

Patzina, C; Botting, C H; García-Sastre, A; Randall, R E; Hale, B G (2017). Human interactome of the influenza B virus NS1 protein. Journal of General Virology, 98(9):2267-2273.

Rissanen, Ilona; Stass, Robert; Zeltina, Antra; Li, Sai; Hepojoki, Jussi; Harlos, Karl; Gilbert, Robert J. C; Huiskonen, Juha T; Bowden, Thomas A (2017). Structural transitions of the conserved and metastable hantaviral glycoprotein envelope. Journal of Virology, 91(21):e00378-17.

Pacesa, Martin; Hendrickx, Rodinde; Bieri, Manuela; Flatt, Justin W; Greber, Urs F; Hemmi, Silvio (2017). Small-size recombinant adenoviral hexon protein fragments for the production of virus-type specific antibodies. Virology Journal, 14(1):158-171.

Maler, Mareike D; Nielsen, Peter J; Stichling, Nicole; Cohen, Idan; Ruzsics, Zsolt; Wood, Connor; Engelhard, Peggy; Suomalainen, Maarit; Gyory, Ildiko; Huber, Michael; Müller-Quernheim, Joachim; Schamel, Wolfgang W A; Gordon, Siamon; Jakob, Thilo; Martin, Stefan F; Jahnen-Dechent, Willi; Greber, Urs F; Freudenberg, Marina A; Fejer, György (2017). Key role of the scavenger receptor MARCO in mediating adenovirus infection and subsequent innate responses of macrophages. mBio, 8(4):e00670-17.

Münz, Christian (2017). Humanized mouse models for Epstein Barr virus infection. Current Opinion in Virology, 25:113-118.

Tarr, Philip E; Kovari, Helen (2017). Another statin option in HIV. The lancet. HIV., 4(7):e278-e279.

McHugh, Donal; Caduff, Nicole; Barros, Mario Henrique M; Rämer, Patrick C; Raykova, Ana; Murer, Anita; Landtwing, Vanessa; Quast, Isaak; Styles, Christine T; Spohn, Michael; Fowotade, Adeola; Delecluse, Henri-Jacques; Papoudou-Bai, Alexandra; Lee, Yong-Moon; Kim, Jin-Man; Middeldorp, Jaap; Schulz, Thomas F; Cesarman, Ethel; Zbinden, Andrea; Capaul, Riccarda; White, Robert E; Allday, Martin J; Niedobitek, Gerald; Blackbourn, David J; Grundhoff, A; Münz, Christian (2017). Persistent KSHV Infection Increases EBV-Associated Tumor Formation In Vivo via Enhanced EBV Lytic Gene Expression. Cell Host & Microbe, 22(1):61-73.

Yakimovich, Artur; Huttunen, Moona; Zehnder, Benno; Coulter, Lesley J; Gould, Victoria; Schneider, Christoph; Kopf, Manfred; McInnes, Colin J; Greber, Urs F; Mercer, Jason (2017). Inhibition of Poxvirus Gene Expression and Genome Replication by Bisbenzimide Derivatives. Journal of Virology:00838-17.

Kok, Yik Lim; Ciuffi, Angela; Metzner, Karin J (2017). Unravelling HIV-1 latency, one cell at a time. Trends in Microbiology, 25(11):932-941.

Ostapchuk, Philomena; Suomalainen, Maarit; Zheng, Yueting; Boucke, Karin; Greber, Urs F; Hearing, Patrick (2017). The adenovirus major core protein VII is dispensable for virion assembly but is essential for lytic infection. PLoS Pathogens, 13(6):e1006455.

Bachmann, Nadine; Turk, Teja; Kadelka, Claus; Marzel, Alex; Shilaih, Mohaned; Böni, Jürg; Aubert, Vincent; Klimkait, Thomas; Leventhal, Gabriel E; Günthard, Huldrych F; Kouyos, Roger; Swiss HIV Cohort Study (2017). Parent-offspring regression to estimate the heritability of an HIV-1 trait in a realistic setup. Retrovirology, 14(1):33.

Brandenberg, Oliver F; Magnus, Carsten; Rusert, Peter; Günthard, Huldrych F; Regoes, Roland Robert; Trkola, Alexandra (2017). Predicting HIV-1 transmission and antibody neutralization efficacy in vivo from stoichiometric parameters. PLoS Pathogens, 13(5):e1006313.

Arand, Michael; Marowsky, Anne (2017). Misclassification of PfEH1 and PfEH2 as epoxide hydrolases. mBio, 8(2):04-17.

Beauparlant, David; Rusert, Peter; Magnus, Carsten; Kadelka, Claus; Weber, Jacqueline; Uhr, Therese; Zagordi, Osvaldo; Oberle, Corinna; Duenas-Decamp, Maria J; Clapham, Paul R; Metzner, Karin J; Günthard, Huldrych F; Trkola, Alexandra (2017). Delineating CD4 dependency of HIV-1: Adaptation to infect low level CD4 expressing target cells widens cellular tropism but severely impacts on envelope functionality. PLoS Pathogens, 13(3):e1006255.

Oberle, Corinna S; Magnus, Carsten; Joos, Beda; Rusert, Peter; Beauparlant, David; Kouyos, Roger; Trkola, Alexandra; Metzner, Karin J; Günthard, Huldrych F (2017). Reply to correspondence 'Conserved signatures indicate HIV-1 transmission is under strong selection and thus is not a "stochastic" process' by Gonzalez et al., Retrovirology 2017. Retrovirology, 14(1):14.

Huber, M; Metzner, K J; Geissberger, F D; Shah, C; Leemann, C; Klimkait, T; Böni, J; Trkola, A; Zagordi, O (2017). MinVar: A rapid and versatile tool for HIV-1 drug resistance genotyping by deep sequencing. Journal of Virological Methods, 240:7-13.

Keller, Saskia; Hetzel, Udo; Sironen, T; Korzyukov, Y; Vapalahti, O; Kipar, Anja; Hepojoki, Jussi (2017). Co-Infecting reptarenaviruses can be vertically transmitted in Boa Constrictor. PLoS Pathogens, 13(1):e1006179.

Selimovic-Hamza, Senija; Boujon, Céline; Hilbe, Monika; Oevermann, Anna; Seuberlich, Torsten (2017). Frequency and pathological phenotype of bovine astrovirus CH13/NeuroS1 infection in neurologically-diseased cattle: towards assessment of causality. Viruses, 9(1):E12.

von Braun, Amrei; Sekaggya-Wiltshire, Christine; Scherrer, Alexandra U; Magambo, Brian; Kambugu, Andrew; Fehr, Jan; Castelnuovo, Barbara (2017). Early virological failure and HIV drug resistance in Ugandan adults co-infected with tuberculosis. AIDS Research and Therapy, 14(1):1.

Carmo, Luís P; Schüpbach-Regula, Gertraud; Müntener, Cedric; Chevance, Anne; Moulin, Gérard; Magouras, Ioannis (2017). Approaches for quantifying antimicrobial consumption per animal species based on national sales data: a Swiss example, 2006 to 2013. Eurosurveillance, 22(6):30458.

Mossoun, A; Calvignac-Spencer, S; Anoh, A E; Pauly, M S; Driscoll, D A; Michel, A O; Grah Nazaire, L; Pfister, S; Sabwe, P; Thiesen, U; Vogler, Barbara; Wiersma, L; Muyembe-Tamfum, J J; Karhemere, S; Akoua-Koffi, C; Couacy-Hymann, E; Fruth, B; Wittig, R; Leendertz, F; Schubert, G (2017). Bushmeat hunting and zoonotic transmission of Simian T-lymphotropic virus 1 in tropical West and Central Africa. Journal of Virology, 91(10):e02479-16.

Franzoso, Francesca D; Seyffert, Michael; Vogel, Rebecca; Yakimovich, Artur; de Andrade Pereira, Bruna; Meier, Anita F; Sutter, Sereina O; Tobler, Kurt; Vogt, Bernd; Greber, Urs F; Büning, Hildegard; Ackermann, Mathias; Fraefel, Cornel (2017). Cell cycle-dependent expression of AAV2 Rep in HSV-1 co-infections gives rise to a mosaic of cells replicating either AAV2 or HSV-1. Journal of Virology:JVI.00357-17.

von Braun, Amrei. Early virological failure and HIV drug resistance in Ugandan adults co-infected with tuberculosis. 2017, University of Zurich, Faculty of Medicine.

Lempereur, Laetitia; Beck, Relja; Fonseca, Isabel; Marques, Cátia; Duarte, Ana; Santos, Marcos; Zúquete, Sara; Gomes, Jacinto; Walder, Gernot; Domingos, Ana; Antunes, Sandra; Baneth, Gad; Silaghi, Cornelia; Holman, Patricia; Zintl, Annetta (2017). Guidelines for the detection of babesia and theileria parasites. Vector Borne and Zoonotic Diseases, 17(1):51-65.

Portillo, Aránzazu; de Sousa, Rita; Santibáñez, Sonia; Duarte, Ana; Edouard, Sophie; Fonseca, Isabel P; Marques, Cátia; Novakova, Marketa; Palomar, Ana M; Santos, Marcos; Silaghi, Cornelia; Tomassone, Laura; Zúquete, Sara; Oteo, José A (2017). Guidelines for the detection of rickettsia spp. Vector Borne and Zoonotic Diseases, 17(1):23-32.

Silaghi, Cornelia; Santos, Ana Sofia; Gomes, Jacinto; Christova, Iva; Matei, Ioana Adriana; Walder, Gernot; Domingos, Ana; Bell-Sakyi, Lesley; Sprong, Hein; von Loewenich, Friederike D; Oteo, José A; de la Fuente, José; Dumler, J Stephen (2017). Guidelines for the direct detection of anaplasma spp. in diagnosis and epidemiological studies. Vector Borne and Zoonotic Diseases, 17(1):12-22.

Work, Thierry M; Dagenais, Julie; Weatherby, Tina M; Balazs, George H; Ackermann, Mathias (2017). In-vitro replication of Chelonid herpesvirus 5 in organotypic skin cultures from Hawaiian green turtles (Chelonia mydas). Journal of Virology, 91(17):e00404-17.

Morganti, Giulia; Gavaudan, Stefano; Canonico, Cristina; Ravagnan, Silvia; Olivieri, Emanuela; Diaferia, Manuela; Marenzoni, Maria Luisa; Antognoni, Maria Teresa; Capelli, Gioia; Silaghi, Cornelia; Veronesi, Fabrizia (2017). Molecular survey on Rickettsia spp., Anaplasma phagocytophilum, Borrelia burgdorferi sensu lato, and Babesia spp. in Ixodes ricinus Ttcks infesting dogs in central Italy. Vector Borne and Zoonotic Diseases, 17(11):743-748.

Dervas, Eva; Hepojoki, Jussi; Laimbacher, Andrea; Romero-Palomo, Fernando; Jelinek, Christine; Keller, Saskia; Smura, Teemu; Hepojoki, Satu; Kipar, Anja; Hetzel, Udo (2017). Nidovirus-Associated proliferative pneumonia in the green tree python (Morelia viridis). Journal of Virology, 91(21):e00718-17.

Rochat, M A; Schlaepfer, E; Speck, R F (2017). Promising role of toll-like receptor 8 agonist in concert with prostratin for activation of silent HIV. Journal of Virology, 91(4):e02084-16.

Schweneker, Marc; Laimbacher, Andrea S; Zimmer, Gert; Wagner, Susanne; Schraner, Elisabeth M; Wolferstätter, Michael; Klingenberg, Marieken; Dirmeier, Ulrike; Steigerwald, Robin; Lauterbach, Henning; Hochrein, Hubertus; Chaplin, Paul; Suter, Mark; Hausmann, Jürgen (2017). Recombinant modified vaccinia virus Ankara generating Ebola virus-like particles. Journal of Virology, 91(11):e00343-17.

2016

Mertz, Dominik; Fadel, Shaza A; Lam, Po-Po; Tran, Dat; Srigley, Jocelyn A; Asner, Sandra A; Science, Michelle; Kuster, Stefan P; Nemeth, Johannes; Johnstone, Jennie; Ortiz, Justin R; Loeb, Mark (2016). Herd effect from influenza vaccination in non-healthcare settings: a systematic review of randomised controlled trials and observational studies. Eurosurveillance, 21(42):2.

Walker, Andreas; Skibbe, Kathrin; Steinmann, Eike; Pfaender, Stephanie; Kuntzen, Thomas; Megger, Dominik A; Groten, Svenja; Sitek, Barbara; Lauer, Georg M; Kim, Arthur Y; Pietschmann, Thomas; Allen, Todd M; Timm, Joerg (2016). Distinct escape pathway by hepatitis C virus genotype 1a from a dominant CD8+T cell response by selection of altered epitope processing. Journal of Virology, 90(1):33-42.

Spiri, Andrea M; Thézé, Julien; Meli, Marina L; Cattori, Valentino; Berger, Alice; Steinrigl, Adolf; Pybus, Oliver G; Hofmann-Lehmann, Regina; Willi, Barbara (2016). Genetic diversity and phenotypic associations of feline caliciviruses from cats in Switzerland. Journal of General Virology, 97(12):3253-3266.

Altmeier, Simon; Toska, Albulena; Sparber, Florian; Teijeira, Alvaro; Halin, Cornelia; LeibundGut-Landmann, Salomé (2016). IL-1 Coordinates the neutrophil response to C.Albicans in the oral mucosa. PLoS Pathogens, 12:9.

Oberle, Corinna S; Joos, Beda; Rusert, Peter; Campbell, Nottania K; Beauparlant, David; Kuster, Herbert; Weber, Jacqueline; Schenkel, Corinne D; Scherrer, Alexandra U; Magnus, Carsten; Kouyos, Roger; Rieder, Philip; Niederöst, Barbara; Braun, Dominique L; Pavlovic, Jovan; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Trkola, Alexandra; Metzner, Karin J; Günthard, Huldrych F (2016). Tracing HIV-1 transmission: envelope traits of HIV-1 transmitter and recipient pairs. Retrovirology, 13(1):62.

Pohl, M O; Lanz, C; Stertz, S (2016). Late stages of the influenza A virus replication cycle — a tight interplay between virus and host. Journal of General Virology, 97(9):2058 -2072.

Giudici, F; Bertisch, B; Negro, F; Stirnimann, G; Müllhaupt, B; Moradpour, D; Cerny, A; Keiser, O; Swiss Hepatitis C Cohort Study (2016). Access to therapy and therapy outcomes in the Swiss Hepatitis C Cohort Study: a person-centred approach. Journal of Viral Hepatitis, 23(9):697-707.

Dolowschiak, Tamas; Mueller, Anna Angelika; Pisan, Lynn Joanna; Feigelman, Rounak; Felmy, Boas; Sellin, Mikael Erik; Namineni, Sukumar; Nguyen, Bidong Dinh; Wotzka, Sandra Yvonne; Heikenwalder, Mathias; von Mering, Christian; Mueller, Christoph; Hardt, Wolf-Dietrich (2016). IFN-γ Hinders Recovery from Mucosal Inflammation during Antibiotic Therapy for Salmonella Gut Infection. Cell Host & Microbe, 20(2):238-249.

Krtková, Jana; Thomas, Elizabeth B; Alas, Germain C M; Schraner, Elisabeth M; Behjatnia, Habib R; Hehl, Adrian B; Paredez, Alexander R (2016). Rac regulates giardia lamblia encystation by coordinating cyst wall protein trafficking and secretion. mBio, 7(4):e01003-e01016.

Green, Victoria A; Pelkmans, Lucas (2016). A Systems Survey of Progressive Host-Cell Reorganization during Rotavirus Infection. Cell Host & Microbe, 20(1):107-120.

Gautret, Philippe; Mockenhaupt, Frank; Grobusch, Martin P; Rothe, Camilla; von Sonnenburg, Frank; van Genderen, Perry J; Chappuis, Francois; Asgeirsson, Hilmir; Caumes, Eric; Bottieau, Emmanuel; Malvy, Denis; Lopez-Vélez, Rogelio; Jensenius, Mogens; Larsen, Carsten Schade; Castelli, Francesco; Rapp, Christophe; Field, Vanessa; Molina, Israel; Gkrania-Klotsas, Effrossyni; Florescu, Simin; Lalloo, David; Schlagenhauf, Patricia (2016). Arboviral and other illnesses in travellers returning from Brazil, June 2013 to May 2016: implications for the 2016 Olympic and Paralympic Games. Eurosurveillance, 21(27):14-18.

Zumthor, Jon Paulin; Cernikova, Lenka; Rout, Samuel; Kaech, Andres; Faso, Carmen; Hehl, Adrian B (2016). Static clathrin assemblies at the peripheral vacuole-plasma membrane interface of the parasitic protozoan giardia lamblia. PLoS Pathogens, 12(7):e1005756.

Seimetz, Elisabeth; Boyayo, Anne-Marie; Mosler, Hans-Joachim (2016). The Influence of Contextual and Psychosocial Factors on Handwashing. American Journal of Tropical Medicine and Hygiene, 94(6):1407-1417.

Bender, Ruben R; Muth, Anke; Schneider, Irene C; Friedel, Thorsten; Hartmann, Jessica; Plückthun, Andreas; Maisner, Andrea; Buchholz, Christian J (2016). Receptor-targeted nipah virus glycoproteins improve cell-type selective gene delivery and reveal a preference for membrane-proximal cell attachment. PLoS Pathogens, 12(6):e1005641.

Personnic, Nicolas; Bärlocher, Kevin; Finsel, Ivo; Hilbi, Hubert (2016). Subversion of retrograde trafficking by translocated pathogen effectors. Trends in Microbiology, 24(6):450-462.

Schmidt, Katharina; Keiser, Simon; Günther, Viola; Georgiev, Oleg; Hirsch, Hans H; Schaffner, Walter; Bethge, Tobias (2016). Transcription enhancers as major determinants of SV40 polyomavirus growth efficiency and host cell tropism. Journal of General Virology, 97(7):1597-1603.

Mockenhaupt, Frank P; Barbre, Kira A; Jensenius, Mogens; Larsen, Carsten S; Barnett, Elizabeth D; Stauffer, William; Rothe, Camilla; Asgeirsson, Hilmir; Hamer, Davidson H; Esposito, Douglas H; Gautret, Philippe; Schlagenhauf, Patricia (2016). Profile of illness in Syrian refugees: A GeoSentinel analysis, 2013 to 2015. Eurosurveillance, 21(10):1-5.

Greber, Urs F (2016). Virus and host mechanics support membrane penetration and cell entry. Journal of Virology, 90(8):3802-3805.

Naujoks, Jan; Tabeling, Christoph; Dill, Brian D; Hoffmann, Christine; Brown, Andrew S; Kunze, Mareike; Kempa, Stefan; Peter, Andrea; Mollenkopf, Hans-Joachim; Dorhoi, Anca; Kershaw, Olivia; Gruber, Achim D; Sander, Leif E; Witzenrath, Martin; Herold, Susanne; Nerlich, Andreas; Hocke, Andreas C; van Driel, Ian; Suttorp, Norbert; Bedoui, Sammy; Hilbi, Hubert; Trost, Matthias; Opitz, Bastian (2016). IFNs modify the proteome of legionella-containing vacuoles and restrict infection via IRG1-derived itaconic acid. PLoS Pathogens, 12(2):e1005408.

Stalder, Hanspeter; Hug, Corinne; Zanoni, Reto; Vogt, Hans-Rudolf; Peterhans, Ernst; Schweizer, Matthias; Bachofen, Claudia (2016). A nationwide database linking information on the hosts with sequence data of their virus strains: A useful tool for the eradication of bovine viral diarrhea (BVD) in Switzerland. Virus Research, 218:49-56.

Rout, Samuel; Zumthor, Jon Paulin; Schraner, Elisabeth M; Faso, Carmen; Hehl, Adrian B (2016). An interactome-centered protein discovery approach reveals novel components involved in mitosome function and homeostasis in giardia lamblia. PLoS Pathogens, 12(12):e1006036.

Paul, P; Münz, C (2016). Autophagy and mammalian viruses: roles in immune response, viral replication, and beyond. In: Kielian, Margaret; Maramorosch, Karl; Mettenleiter, Thomas. Advances in Virus Research. Burlington: Elsevier, 149-195.

Judd, Ali; Collins, Intira; Lodi, Sara; Olson, Ashley; Pantazis, Nikos; del Amo, Julia; Duff, Charlotte; Gennotte, Anne-Francoise; Kristensen, Dennis; Ledergerber, Bruno; Nadal, David; Rojo Conejo, Pablo; Sabin, Caroline A; Saidi, Yacine; Salbol Brandt, Rikke; Termote, Monique; Thorne, Claire; Warszawski, Josiane; Gibb, Diana (2016). Children and young people with perinatal HIV in Europe: epidemiological situation in 2014 and implications for the future. Eurosurveillance, 21(10):20-26.

Van der Auwera, Gert; Bart, Aldert; Chicharro, Carmen; Cortes, Sofia; Davidsson, Leigh; Di Muccio, Trentina; Dujardin, Jean-Claude; Felger, Ingrid; Paglia, Maria Grazia; Grimm, Felix; Harms, Gundel; Jaffe, Charles L; Manser, Monika; Ravel, Christophe; Robert-Gangneux, Florence; Roelfsema, Jeroen; Töz, Seray; Verweij, Jaco J; Chiodini, Peter L (2016). Comparison of Leishmania typing results obtained from 16 European clinical laboratories in 2014. Eurosurveillance, 21(49):1-11.

Reimann, Regina R; Sonati, Tiziana; Hornemann, Simone; Herrmann, Uli S; Arand, Michael; Hawke, Simon; Aguzzi, Adriano (2016). Differential toxicity of antibodies to the prion protein. PLoS Pathogens, 12(1):e1005401.

Moormann, Ann; Münz, Christian (2016). Editorial overview: Viruses and cancer. Current Opinion in Virology, 20:iv-v.

Münz, Christian (2016). Epstein Barr virus: a tumor virus that needs cytotoxic lymphocytes to persist asymptomatically. Current Opinion in Virology, 20:34-39.

Magnus, C; Reh, L; Trkola, Alexandra (2016). HIV-1 resistance to neutralizing antibodies: Determination of antibody concentrations leading to escape mutant evolution. Virus Research, 218:57-70.

Kakalacheva, Kristina; Regenass, Stephan; Wiesmayr, Silke; Azzi, Tarik; Berger, Christoph; Dale, Russell; Brilot, Fabienne; Münz, Christian; Rostasy, Kevin; Nadal, David; Lünemann, Jan (2016). Infectious Mononucleosis Triggers Generation of IgG Auto-Antibodies against Native Myelin Oligodendrocyte Glycoprotein. Viruses, 8(2):51.

Javed, A; Leuchte, N; Salinas, G; Opitz, L; Stahl-Hennig, C; Sopper, S; Sauermann, U (2016). Pre-infection transcript levels of FAM26F in peripheral blood mononuclear cells inform about overall plasma viral load in acute and post-acute phase after simian immunodeficiency virus infection. Journal of General Virology, 97(12):3400-3412.

2015

Tripathi, S; Pohl, M O; Zhou, Y; Rodriguez-Frandsen, A; Wang, G; Stein, D A; Moulton, H M; Che, J; Mulder, L C F; Yangüez, E; Andenmatten, D; Pache, L; Manicassamy, B; Albrecht, R A; Gonzalez, M G; Nguyen, Quy; Brass, A; Elledge, S; White, M; Shapira, S; Hacohen, N; Karlas, A; Meyer, T; Shales, M; Gatorano, A; Johnson, J R; Jang, G; Johnson, T; Verschueren, E; Sanders, D; Krogan, N; Shaw, M; König, R; Stertz, S; García-Sastre, A; Chanda, S K; DeJesus, P (2015). Meta- and orthogonal integration of influenza "OMICs" data defines a role for UBR4 in virus budding. Cell Host & Microbe, 18(6):723-735.

Simon, Sylvia; Schell, Ursula; Heuer, Natalie; Hager, Dominik; Albers, Michael F; Matthias, Jan; Fahrnbauer, Felix; Trauner, Dirk; Eichinger, Ludwig; Hedberg, Christian; Hilbi, Hubert (2015). Inter-kingdom signaling by the Legionella Quorum Sensing Molecule LAI-1 modulates cell migration through an IQGAP1-Cdc42-ARHGEF9-dependent pathway. PLoS Pathogens, 11(12):e1005307.

Brandenberg, Oliver F; Magnus, Carsten; Regoes, Roland R; Trkola, Alexandra (2015). The HIV-1 entry process: A stoichiometric view. Trends in Microbiology, 23(12):763-774.

Gregorovic, Goran; Boulden, Elizabeth A; Bosshard, Rachel; Elgueta Karstegl, Claudio; Skalsky, Rebecca; Cullen, Bryan R; Gujer, Cornelia; Rämer, Patrick; Münz, Christian; Farrell, Paul J (2015). Epstein-barr viruses (EBVs) deficient in EBV-encoded RNAs have higher levels of latent membrane protein 2 RNA expression in lymphoblastoid cell lines and efficiently establish persistent infections in humanized mice. Journal of Virology, 89(22):11711-11714.

Kreibich, Saskia; Emmenlauer, Mario; Fredlund, Jennifer; Rämö, Pauli; Münz, Christian; Dehio, Christoph; Enninga, Jost; Hardt, Wolf-Dietrich (2015). Autophagy Proteins Promote Repair of Endosomal Membranes Damaged by the Salmonella Type Three Secretion System 1. Cell Host & Microbe, 18(5):527-537.

Wensing, Annemarie M; Calvez, Vincent; Günthard, Huldrych F; Johnson, Victoria A; Paredes, Roger; Pillay, Deenan; Shafer, Robert W; Richman, Douglas D (2015). 2015 update of the drug resistance mutations in HIV-1. Topics in Antiviral Medicine, 23(4):132-141.

Jung, Jae; Münz, Christian (2015). Immune control of oncogenic γ-herpesviruses. Current Opinion in Virology, 14:79-86.

Turkington, H L; Juozapaitis, M; Kerry, P S; Aydillo, T; Ayllon, J; García-Sastre, A; Schwemmle, M; Hale, B G (2015). Novel bat influenza virus NS1 proteins bind double-stranded RNA and antagonize host innate immunity. Journal of Virology, 89(20):10696-10701.

Birger, Ruthie B; Kouyos, Roger D; Cohen, Ted; Griffiths, Emily C; Huijben, Silvie; Mina, Michael; Volkova, Victoriya; Grenfell, Bryan; Metcalf, C Jessica E (2015). The potential impact of coinfection on antimicrobial chemotherapy and drug resistance. Trends in Microbiology, 23(9):537-44.

Keller, Etienne Xavier; Delbue, Serena; Tognon, Mauro; Provenzano, Maurizio (2015). Polyomavirus BK and prostate cancer: a complex interaction of potential clinical relevance. Reviews in Medical Virology, 25(6):366-378.

Reh, Lucia; Magnus, Carsten; Schanz, Merle; Weber, Jacqueline; Uhr, Therese; Rusert, Peter; Trkola, Alexandra (2015). Capacity of broadly neutralizing antibodies to inhibit HIV-1 cell-cell transmission is strain- and epitope-dependent. PLoS Pathogens, 11(7):e1004966.

Luisoni, Stefania; Suomalainen, Maarit; Boucke, Karin; Tanner, Lukas B; Wenk, Markus R; Guan, Xue Li; Grzybek, Michał; Coskun, Ünal; Greber, Urs F (2015). Co-option of membrane wounding enables virus penetration into cells. Cell Host & Microbe, 18(1):75-85.

Myburgh, Renier; Ivic, Sandra; Pepper, Michael S; Gers-Huber, Gustavo; Li, Duo; Audigé, Annette; Rochat, Mary-Aude; Jaquet, Vincent; Regenass, Stephan; Manz, Markus G; Salmon, Patrick; Krause, Karl-Heinz; Speck, Roberto F (2015). Lentivector knockdown of CCR5 in hematopoietic stem and progenitor cells confers functional and persistent HIV-1 resistance in humanized mice. Journal of Virology, 89(13):6761-6772.

Edinger, T O; Pohl, M O; Yangüez, E; Stertz, S (2015). Cathepsin W is required for escape of influenza a virus from late endosomes. mBio, 6(3):e00297-15.

Lewis, C S; Porter, E; Matthews, D; Kipar, A; Tasker, S; Helps, C R; Siddell, S G (2015). Genotyping coronaviruses associated with feline infectious peritonitis. Journal of General Virology, 96(Pt 6):1358-1368.

Fehr, Alexander; Eshwar, Athmanya K; Neuhauss, Stephan Cf; Ruetten, Maja; Lehner, Angelika; Vaughan, Lloyd (2015). Evaluation of zebrafish as a model to study the pathogenesis of the opportunistic pathogen Cronobacter turicensis. Emerging Microbes and Infections, 4(5):e29.

Nagel, Maria A; Lenggenhager, Daniela; White, Teresa; Khmeleva, Nelly; Heintzman, Anna; Boyer, Philip J; Gilden, Don (2015). Disseminated VZV infection and asymptomatic VZV vasculopathy after steroid abuse. Journal of Clinical Virology, 66:72-75.

Alves, Lisa; Khosravi, Mojtaba; Avila, Mislay; Ader-Ebert, Nadine; Bringolf, Fanny; Zurbriggen, Andreas; Vandevelde, Marc; Plattet, Philippe (2015). SLAM- and nectin-4-independent noncytolytic spread of canine distemper virus in astrocytes. Journal of Virology, 89(10):5724-5733.

Ader-Ebert, Nadine; Khosravi, Mojtaba; Herren, Michael; Avila, Mislay; Alves, Lisa; Bringolf, Fanny; Örvell, Claes; Langedijk, Johannes P; Zurbriggen, Andreas; Plemper, Richard K; Plattet, Philippe (2015). Sequential conformational changes in the morbillivirus attachment protein initiate the membrane fusion process. PLoS Pathogens, 11(5):e1004880.

Finsel, Ivo; Hilbi, Hubert (2015). Formation of a pathogen vacuole according to Legionella pneumophila: how to kill one bird with many stones. Cellular Microbiology, 17(7):935-950.

Jelcic, Ivan; Jelcic, Ilijas; Faigle, Wolfgang; Sospedra, Mireia; Martin, Roland (2015). Immunology of progressive multifocal leukoencephalopathy. Journal of Neurovirology, 21(6):614-622.

Keiser, Simon; Schmidt, Katharina; Bethge, Tobias; Steiger, Julia; Hirsch, Hans H; Schaffner, Walter; Georgiev, Oleg (2015). Emergence of infectious simian virus 40 whose AT tract in the replication origin/early promoter region is substituted by cellular or viral DNAs. Journal of General Virology, 96:601-606.

Metcalf, C J E; Birger, R B; Funk, S; Kouyos, R D; Lloyd-Smith, J O; Jansen, V A A (2015). Five challenges in evolution and infectious diseases. Epidemics, 10:40-44.

Wyrzucki, Arkadiusz; Bianchi, Matteo; Kohler, Ines; Steck, Marco; Hangartner, Lars (2015). Heterosubtypic antibodies to influenza A virus have limited activity against cell-bound virus but are not impaired by strain-specific serum antibodies. Journal of Virology, 89(6):3136-3144.

Yang, Wan-Lin; Kouyos, Roger D; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Scherrer, Alexandra U; Shilaih, Mohaned; Hinkley, Trevor; Petropoulos, Christos; Bonhoeffer, Sebastian; Günthard, Huldrych F (2015). Persistence of transmitted HIV-1 drug resistance mutations associated with fitness costs and viral genetic backgrounds. PLoS Pathogens, 11(3):e1004722.

Bethge, Tobias; Hachemi, Helen A; Manzetti, Julia; Gosert, Rainer; Schaffner, Walter; Hirsch, Hans H (2015). Sp1 sites in the noncoding control region of BK polyomavirus are key regulators of bidirectional viral early and late gene expression. Journal of Virology, 89(6):3396-3411.

Avila, Mislay; Khosravi, Mojtaba; Alves, Lisa; Ader-Ebert, Nadine; Bringolf, Fanny; Zurbriggen, Andreas; Plemper, Richard K; Plattet, Philippe (2015). Canine distemper virus envelope protein interactions modulated by hydrophobic residues in the fusion protein globular head. Journal of Virology, 89(2):1445-1451.

Hepojoki, J; Kipar, A; Korzyukov, Y; Bell-Sakyi, L; Vapalahti, O; Hetzel, U (2015). Replication of Boid Inclusion Body Disease-Associated Arenaviruses Is Temperature Sensitive in both Boid and Mammalian Cells. Journal of Virology, 89(2):1119-1128.

Brandenberg, Oliver F; Magnus, Carsten; Rusert, Peter; Regoes, Roland R; Trkola, Alexandra (2015). Different infectivity of HIV-1 strains is linked to number of envelope trimers required for entry. PLoS Pathogens, 11(1):e1004595.

Wild, Peter; Leisinger, Sabine; de Oliveira, Anna Paula; Schraner, Elisabeth M; Kaech, Andres; Ackermann, Mathias; Tobler, Kurt (2015). Herpes simplex virus 1 Us3 deletion mutant is infective despite impaired capsid translocation to the cytoplasm. Viruses, 7(1):52-71.

Seyffert, Michael; Glauser, Daniel L; Tobler, Kurt; Georgiev, Oleg; Vogel, Rebecca; Vogt, Bernd; Agundez, Leticia; Linden, Michael; Büning, Hildegard; Ackermann, Mathias; Fraefel, Cornel (2015). Adeno-associated virus type 2 Rep68 can bind to consensus rep-binding sites on the herpes simplex virus 1 genome. Journal of Virology, 89(21):11150-11158.

Trautwein-Weidner, Kerstin; Gladiator, André; Kirchner, Florian R; Becattini, Simone; Rülicke, Thomas; Sallusto, Federica; LeibundGut-Landmann, Salomé (2015). Antigen-specific Th17 cells are primed by distinct and complementary dendritic cell subsets in oropharyngeal candidiasis. PLoS Pathogens, 11(10):e1005164.

Lilje, Jonathan; Mosler, Hans-Joachim; Kessely, Hamit (2015). Factors Determining Water Treatment Behavior for the Prevention of Cholera in Chad. American Journal of Tropical Medicine and Hygiene, 93(1):57-65.

Carballo, David; Delhumeau, Cécile; Carballo, Sebastian; Bähler, Caroline; Radovanovic, Dragona; Hirschel, Bernard; Clerc, Olivier; Bernasconi, Enos; Fasel, Dominique; Schmid, Patrick; Cusini, Alexia; Fehr, Jan; Erne, Paul; Keller, Pierre-Fréderic; Ledergerber, Bruno; Calmy, Alexandra (2015). Increased mortality after a first myocardial infarction in human immunodeficiency virus-infected patients; a nested cohort study. AIDS Research and Therapy, 12(4):online.

Mossong, J; DeCruyenaere, F; Moris, G; Ragimbeau, C; Olinger, Ch; Johler, Sophia; Perrin, M; Hau, P; Weicherding, P (2015). Investigation of a staphylococcal food poisoning outbreak combining case–control, traditional typing and whole genome sequencing methods, Luxembourg, June 2014. Eurosurveillance, 20(45):pii=30059.

Campos, Noëlie; Myburgh, Renier; Garcel, Aude; Vautrin, Audrey; Lapasset, Laure; Nadal, Erika Schläpfer; Mahuteau-Betzer, Florence; Najman, Romain; Fornarelli, Pauline; Tantale, Katjana; Basyuk, Eugénia; Séveno, Martial; Venables, Julian P; Pau, Bernard; Bertrand, Edouard; Wainberg, Mark A; Speck, Roberto F; Scherrer, Didier; Tazi, Jamal (2015). Long lasting control of viral rebound with a new drug ABX464 targeting Rev - mediated viral RNA biogenesis. Retrovirology, 12(30):online.

Helfer-Hungerbuehler, A Katrin; Widmer, Stefan; Kessler, Yvonne; Riond, Barbara; Boretti, Felicitas S; Grest, Paula; Lutz, Hans; Hofmann-Lehmann, Regina (2015). Long-term follow up of feline leukemia virus infection and characterization of viral RNA loads using molecular methods in tissues of cats with different infection outcomes. Virus Research, 197:137-150.

Birger, Ruthie; Kouyos, Roger; Dushoff, Jonathan; Grenfell, Bryan (2015). Modeling the effect of HIV coinfection on clearance and sustained virologic response during treatment for hepatitis C virus. Epidemics, 12:1-10.

Herrmann, Uli S; Sonati, Tiziana; Falsig, Jeppe; Reimann, Regina R; Dametto, Paolo; O'Connor, Tracy; Li, Bei; Lau, Agnes; Hornemann, Simone; Sorce, Silvia; Wagner, Uli; Sanoudou, Despina; Aguzzi, Adriano (2015). Prion infections and anti-PrP antibodies trigger converging neurotoxic pathways. PLoS Pathogens, 11(2):e1004662.

Nesina, Stefanie; Helfer-Hungerbuehler, A K; Riond, Barbara; Boretti, Felicitas S; Willi, Barbara; Meli, Marina L; Grest, Paula; Hofmann-Lehmann, Regina (2015). Retroviral DNA-the silent winner: blood transfusion containing latent feline leukemia provirus causes infection and disease in naïve recipient cats. Retrovirology, 12(1):105.

Ponroy, Nicolas; Taveira, Aline; Mueller, Nicolas J; Millard, Anne-Laure (2015). Statins demonstrate a broad anti-cytomegalovirus activity in vitro in ganciclovir-susceptible and resistant strains. Journal of Medical Virology, 87(1):141-153.

Lanz, C; Yangüez, E; Andenmatten, D; Stertz, S (2015). Swine IFITM proteins potently inhibit influenza A virus replication. Journal of Virology, 89(1):863-869.

Klausmann, Stefanie; Sydler, Titus; Summerfield, Artur; Lewis, Fraser I; Weilenmann, Roseline; Sidler, Xaver; Brugnera, Enrico (2015). T-cell reprogramming through targeted CD4-coreceptor and T-cell receptor expression on maturing thymocytes by latent Circoviridae family member porcine circovirus type 2 cell infections in the thymus. Emerging Microbes and Infections, 4(3):e15.

2014

Egli, Adrian; Santer, Deanna M; O'Shea, Daire; Barakat, Khaled; Syedbasha, Mohammedyaseen; Vollmer, Madeleine; Baluch, Aliyah; Bhat, Rakesh; Groenendyk, Jody; Joyce, Michael A; Lisboa, Luiz F; Thomas, Brad S; Battegay, Manuel; Khanna, Nina; Mueller, Thomas; Tyrrell, D Lorne J; Houghton, Michael; Humar, Atul; Kumar, Deepali (2014). IL-28B is a Key Regulator of B- and T-Cell Vaccine Responses against Influenza. PLoS Pathogens, 10(12):e1004556.

Roulin, Pascal S; Lötzerich, Mark; Torta, Federico; Tanner, Lukas B; van Kuppeveld, Frank J M; Wenk, Markus R; Greber, Urs F (2014). Rhinovirus uses a phosphatidylinositol 4-phosphate/cholesterol counter-current for the formation of replication compartments at the ER-Golgi interface. Cell Host & Microbe, 16(5):677-690.

Münz, Christian (2014). Regulation of innate immunity by the molecular machinery of macroautophagy. Cellular Microbiology, 16(11):1627-1636.

Sundqvist, Emilie; Buck, Dorothea; Warnke, Clemens; Albrecht, Eva; Gieger, Christian; Khademi, Mohsen; Lima Bomfim, Izaura; Fogdell-Hahn, Anna; Link, Jenny; Alfredsson, Lars; Søndergaard, Helle Bach; Hillert, Jan; Oturai, Annette B; Hemme, Bernhard; Kockum, Ingrid; Olsson, Tomas; Martin, Roland (2014). JC polyomavirus infection is strongly controlled by human leucocyte antigen class II variants. PLoS Pathogens, 10(4):e1004084.

Prasad, Vibhu; Suomalainen, Maarit; Pennauer, Mirjam; Yakimovich, Artur; Andriasyan, Vardan; Hemmi, Silvio; Greber, Urs F (2014). Chemical induction of unfolded protein response enhances cancer cell killing through lytic virus infection. Journal of Virology, 88(22):13086-13098.

Schlaepfer, Erika; Rochat, Mary-Aude; Duo, Li; Speck, Roberto F (2014). Triggering TLR2, -3, -4, -5, and -8 reinforces the restrictive nature of M1- and M2-polarized macrophages to HIV. Journal of Virology, 88(17):9769-9781.

de Bruin, E; Loeber, J G; Meijer, A; Castillo, G Martinez; Cepeda, M L Granados; Torres-Sepúlveda, M Rosario; Borrajo, G J C; Caggana, M; Giguere, Y; Meyer, M; Fukushi, M; Devi, A R Rama; Khneisser, I; Vilarinho, L; von Döbeln, U; Torresani, T; Mackenzie, J; Zutt, I; Schipper, M; Elvers, L H; Koopmans, M P G (2014). Evolution of an influenza pandemic in 13 countries from 5 continents monitored by protein microarray from neonatal screening bloodspots. Journal of Clinical Virology, 61(1):74-80.

Diefenbach, Russel J; Fraefel, Cornel; Cunningham, Anthony L (2014). The interaction of HSV-1 tegument proteins pUL36 and pUL37: a novel target for antivirals that inhibit viral assembly. Future Virology:787-789.

Antsiferova, Olga; Müller, Anne; Rämer, Patrick C; Chijioke, Obinna; Chatterjee, Bithi; Raykova, Ana; Planas, Raquel; Sospedra, Mireia; Shumilov, Anatoliy; Tsai, Ming-Han; Delecluse, Henri-Jacques; Münz, Christian (2014). Adoptive transfer of EBV specific CD8+ T cell clones can transiently control EBV infection in humanized mice. PLoS Pathogens, 10(8):e1004333.

Whitney, Paul G; Bär, Eva; Osorio, Fabiola; Rogers, Neil C; Schraml, Barbara U; Deddouche, Safia; LeibundGut-Landmann, Salomé; Reis e Sousa, Caetano (2014). Syk signaling in dendritic cells orchestrates innate resistance to systemic fungal infection. PLoS Pathogens, 10(7):e1004276.

Haas, Florian; Yamauchi, Kazuma; Murat, Monika; Bernasconi, Michele; Yamanaka, Noboru; Speck, Roberto F; Nadal, David (2014). Activation of NF-κB via Endosomal Toll-like Receptor 7 (TLR7)or TLR9 Suppresses Murine Herpes Virus 68 Reactivation. Journal of Virology, 88(17):10002-10012.

Wensing, Annemarie M; Calvez, Vincent; Günthard, Huldrych F; Johnson, Victoria A; Paredes, Roger; Pillay, Deenan; Shafer, Robert W; Richman, Douglas D (2014). 2014 Update of the drug resistance mutations in HIV-1. Topics in Antiviral Medicine, 22(3):642-650.

Meyer Sauteur, Patrick M; Jacobs, Bart C; Spuesens, Emiel B M; Jacobs, Enno; Nadal, David; Vink, Cornelis; van Rossum, Annemarie M C (2014). Antibody responses to Mycoplasma pneumoniae: role in pathogenesis and diagnosis of encephalitis? PLoS Pathogens, 10(6):e1003983.

Abel zur Wiesch, Pia; Kouyos, Roger; Abel, Sören; Viechtbauer, Wolfgang; Bonhoeffer, Sebastian (2014). Cycling empirical antibiotic therapy in hospitals: Meta-analysis and models. PLoS Pathogens, 10(6):e1004225.

Bruggmann, P; Berg, T; et al; Müllhaupt, B (2014). Historical epidemiology of hepatitis C virus (HCV) in selected countries. Journal of Viral Hepatitis, 21 Suppl:5-33.

Wedemeyer, H; et al; Müllhaupt, B (2014). Strategies to manage hepatitis C virus (HCV) disease burden. Journal of Viral Hepatitis, 21 Suppl:60-89.

Razavi, H; et al; Müllhaupt, B (2014). The present and future disease burden of hepatitis C virus (HCV) infection with today's treatment paradigm. Journal of Viral Hepatitis, 21 Suppl:34-59.

Wyrzucki, A; Dreyfus, C; Kohler, I; Steck, M; Wilson, I A; Hangartner, L (2014). Alternative Recognition of the Conserved Stem Epitope in Influenza A Virus Hemagglutinin by a VH3-30-Encoded Heterosubtypic Antibody. Journal of Virology, 88(12):7083-7092.

Schneider, Christoph; Nobs, Samuel P; Heer, Alex K; Kurrer, Michael; Klinke, Glynis; van Rooijen, Nico; Vogel, Johannes; Kopf, Manfred (2014). Alveolar macrophages are essential for protection from respiratory failure and associated morbidity following influenza virus infection. PLoS Pathogens, 10(4):e1004053.

Münz, Christian (2014). Influenza A virus lures autophagic protein LC3 to budding sites. Cell Host & Microbe, 15(2):130-131.

Haas, Florian; Yamauchi, Kazuma; Murat, Monika; Bernasconi, Michele; Yamanaka, Noboru; Speck, Roberto F; Nadal, David (2014). Activation of NF-kappa B via endosomal toll-like receptor 7 (TLR7) or TLR9 suppresses murine herpesvirus 68 reactivation. Journal of Virology, 88(17):10002-10012.

Hepojoki, J; Strandin, T; Hetzel, U; Sironen, T; Klingstrom, J; Sane, J; Makela, S; Mustonen, J; Meri, S; Lundkvist, A; Vapalahti, O; Lankinen, H; Vaheri, A (2014). Acute hantavirus infection induces galectin-3-binding protein. Journal of General Virology, 95(Pt_11):2356-2364.

Simen, Birgitte B; Braverman, Michael S; Abbate, Isabella; Aerssens, Jeroen; Bidet, Yannick; Bouchez, Olivier; Gabriel, Christian; Izopet, Jacques; Kessler, Harald H; Stelzl, Evelyn; Di Giallonardo, Francesca; Schlapbach, Ralph; Radonic, Aleksander; Paredes, Roger; Recordon-Pinson, Patricia; Sakwa, James; St John, Elizabeth P; Schmitz-Agheguian, Gudrun G; Metzner, Karin J; Däumer, Martin P (2014). An international multicenter study on HIV-1 drug resistance testing by 454 ultra-deep pyrosequencing. Journal of Virological Methods, 204:31-37.

Humphrey, S; Chaloner, G; Kemmett, K; Davidson, N; Williams, N; Kipar, A; Humphrey, T; Wigley, P (2014). Campylobacter jejuni is not merely a commensal in commercial broiler chickens and affects bird welfare. mBio, 5(4):e01364-14.

Bühler, Silja; Roddy, Paul; Nolte, Ellen; Borchert, Matthias (2014). Clinical Documentation and Data Transfer from Ebola and Marburg Virus Disease Wards in Outbreak Settings: Health Care Workers’ Experiences and Preferences. Viruses, 6(2):927-937.

Abdel-Mohsen, Mohamed; Deng, Xutao; Liegler, Teri; Guatelli, John C; Salama, Mohamed S; Ghanem, Hussam El-Din A; Rauch, Andri; Ledergerber, Bruno; Deeks, Steven G; Günthard, Huldrych F; Wong, Joseph K; Pillai, Satish K (2014). Effects of alpha interferon treatment on intrinsic anti-HIV-1 immunity in vivo. Journal of Virology, 88(1):763-767.

Shah, Nikunj; Hülsmeier, Andreas J; Hochhold, Nina; Neidhart, Michel; Gay, Steffen; Hennet, Thierry (2014). Exposure to Mimivirus collagen promotes arthritis. Journal of Virology, 88(2):838-845.

Meier, Roger; Franceschini, Andrea; Horvath, Peter; Tetard, Marilou; Mancini, Roberta; von Mering, Christian; Helenius, Ari; Lozach, Pierre-Yves (2014). Genome-Wide Small Interfering RNA Screens Reveal VAMP3 as a Novel Host Factor Required for Uukuniemi Virus Late Penetration. Journal of Virology, 88(15):8565-8578.

Simon, Sylvia; Wagner, Maria A; Rothmeier, Eva; Müller-Taubenberger, Annette; Hilbi, Hubert (2014). Icm/Dot-dependent inhibition of phagocyte migration by Legionella is antagonized by a translocated Ran GTPase activator. Cellular Microbiology, 16(7):977-992.

Duscha, Stefan; Boukari, Heithem; Shcherbakov, Dimitri; Salian, Sumantha; Silva, Sandrina; Kendall, Ann; Kato, Takayuki; Akbergenov, Rashid; Perez-Fernandez, Deborah; Bernet, Bruno; Vaddi, Swapna; Thommes, Pia; Schacht, Jochen; Crich, David; Vasella, Andrea; Böttger, Erik C (2014). Identification and evaluation of improved 4'-O-(alkyl) 4,5-disubstituted 2-deoxystreptamines as next-generation aminoglycoside antibiotics. mBio, 5(5):e01827-e01814.

Brandenberg, Oliver F; Rusert, Peter; Magnus, Carsten; Weber, Jacqueline; Böni, Jürg; Günthard, Huldrych F; Regoes, Roland R; Trkola, Alexandra (2014). Partial rescue of V1V2 mutant infectivity by HIV-1 cell-cell transmission supports the domain’s exceptional capacity for sequence variation. Retrovirology, 11:75.

Maurer, F; Castelberg, C; von Braun, A; Wolfensberger, A; Bloemberg, G; Bottger, E; Somoskovi, A (2014). Postsurgical wound infections due to rapidly growing mycobacteria in Swiss medical tourists following cosmetic surgery in Latin America between 2012 and 2014. Eurosurveillance, 19(37):pii=20905.

Pohl, M O; Edinger, T O; Stertz, S (2014). Prolidase is required for early trafficking events during influenza a virus entry. Journal of Virology, 88(19):11271-11283.

Hetzel, U; Sironen, T; Laurinmäki, P; Liljeroos, L; Patjas, A; Henttonen, H; Vaheri, A; Artelt, A; Kipar, A; Butcher, S J; Vapalahti, O; Hepojoki, J (2014). Reply to "Updated phylogenetic analysis of arenaviruses detected in boid snakes". Journal of Virology, 88(2):1401.

Cummings, Kevin J; Rodriguez-Rivera, Lorraine D; Mitchell, Katharyn J; Hoelzer, Karin; Wiedmann, Martin; McDonough, Patrick L; Altier, Craig; Warnick, Lorin D; Perkins, Gillian A (2014). Salmonella enterica serovar Oranienburg outbreak in a veterinary medical teaching hospital with evidence of nosocomial and on-farm transmission. Vector Borne and Zoonotic Diseases, 14(7):496-502.

Kelly, Barbar J; Bauerfeind, Rudolf; Binz, Anne; Sodeik, Beate; Laimbacher, Andrea S; Fraefel, C; Diefenbach, Russel J (2014). The interaction of the HSV-1 tegument proteins pUL36 and pUL37 is essential for secondary envelopment during viral egress. Virology, 454-455:67-77.

Dudler, Robert (2014). The role of bacterial phytotoxins in inhibiting the eukaryotic proteasome. Trends in Microbiology, 22(1):28-35.

Sorce, Silvia; Nuvolone, Mario; Keller, Annika; Falsig, Jeppe; Varol, Ahmet; Schwarz, Petra; Bieri, Monika; Budka, Herbert; Aguzzi, Adriano (2014). The role of the NADPH oxidase NOX2 in prion pathogenesis. PLoS Pathogens, 10(12):e1004531.

Somoskovi, A; Helbling, P; Deggim, V; Hömke, R; Ritter, C; Böttger, E C (2014). Transmission of multidrug-resistant tuberculosis in a low-incidence setting, Switzerland, 2006 to 2012. Eurosurveillance, 19(11):4.

Hornok, Sándor; Földvári, Gábor; Rigó, Krisztina; Meli, Marina L; Tóth, Mária; Molnár, Viktor; Gönczi, Enikő; Farkas, Róbert; Hofmann-Lehmann, Regina (2014). Vector-borne agents detected in fleas of the northern white-breasted hedgehog. Vector Borne and Zoonotic Diseases, 14(1):74-76.

Bányai, K; Borzák, R; Ihász, K; Fehér, E; Dán, A; Jakab, F; Papp, T; Hetzel, U; Marschang, R E; Farkas, S L (2014). Whole-genome sequencing of a green bush viper reovirus reveals a shared evolutionary history between reptilian and unusual mammalian orthoreoviruses. Archives of Virology, 159(1):153-158.

2013

Gladiator, André; LeibundGut-Landmann, Salomé (2013). Innate lymphoid cells: new players in IL-17-mediated antifungal immunity. PLoS Pathogens, 9(12):e1003763.

Wang, I-Hsuan; Suomalainen, Maarit; Andriasyan, Vardan; Kilcher, Samuel; Mercer, Jason; Neef, Anne; Luedtke, Nathan W; Greber, Urs F (2013). Tracking viral genomes in host cells at single-molecule resolution. Cell Host & Microbe, 14(4):468-480.

Suomalainen, Maarit; Luisoni, Stefania; Boucke, Karin; Bianchi, Sarah; Engel, Daniel A; Greber, Urs F (2013). A direct and versatile assay measuring membrane penetration of adenovirus in single cells. Journal of Virology, (01833):13.

Hauber, I; Hofmann-Sieber, H; Chemnitz, J; Dubrau, D; Chusainow, J; Stucka, R; Hartjen, P; Schambach, A; Ziegler, P; Hackmann, K; Schröck, E; Schumacher, U; Lindner, C; Grundhoff, A; Baum, C; Manz, M G; Buchholz, F; Hauber, J (2013). Highly significant antiviral activity of HIV-1 LTR-specific tre-recombinase in humanized mice. PLoS Pathogens, 9(9):e1003587.

Moelling, Karin (2013). What contemporary viruses tell us about evolution: a personal view. Archives of Virology, 158(9):1833-1848.

Lohrmann, F; Dijkman, R; Stertz, S; Thiel, V; Haller, O; Staeheli, P; Kochs, G (2013). Emergence of a C-terminal seve 1 n amino acid elongation of NS1 around 1950 2 conferred a minor growth advantage to former seasonal influenza A viruses. Journal of Virology, 87(20):11300-11303.

Vonaesch, Pascale; Cardini, Steven; Sellin, Mikael E; Goud, Bruno; Hardt, Wolf-Dietrich; Schauer, Kristine (2013). Quantitative insights into actin rearrangements and bacterial target site selection fromSalmonella Typhimurium infection of micropatterned cells. Cellular Microbiology, 15(11):1851-1865.

Alamares-Sapuay, J G; Martinez-Gil, L; Stertz, S; Miller, M S; Shaw, M L; Palese, P (2013). Serum- and glucocorticoid-regulated kinase 1 is required for nuclear export of the ribonucleoprotein of influenza A virus. Journal of Virology, 87(10):6020-6026.

Suomalainen, Maarit; Greber, Urs F (2013). Uncoating of non-enveloped viruses. Current Opinion in Virology, (12):192-197.

Hoot, Sam; McGuire, Andrew T; Cohen, Kristen W; Strong, Roland K; Hangartner, Lars; Klein, Florian; Diskin, Ron; Scheid, Johannes F; Sather, D Noah; Burton, Dennis R; Stamatatos, Leonidas (2013). Recombinant HIV Envelope Proteins Fail to Engage Germline Versions of Anti-CD4bs bNAbs. PLoS Pathogens, 9(1):e003106.

Mohammadi, Pejman; Desfarges, Sébastien; Bartha, István; Joos, Beda; Zangger, Nadine; Muñoz, Miguel; Günthard, Huldrych F; Beerenwinkel, Niko; Telenti, Amalio; Ciuffi, Angela (2013). 24 hours in the life of HIV-1 in a T cell line. PLoS Pathogens, 9(1):e1003161.

Jensenius, Mogens; Han, Pauline V; Schlagenhauf, Patricia; Schwartz, Eli; Parola, Philippe; Castelli, Francesco; von Sonnenburg, Frank; Loutan, Louis; Leder, Karin; Freedman, David O (2013). Acute and potentially life-threatening tropical diseases in western travelers - a geosentinel multicenter study, 1996-2011. American Journal of Tropical Medicine and Hygiene, 88(2):397-404.

Wolfrum, Nina; Greber, Urs F (2013). Adenovirus Signalling in Entry. Cellular Microbiology, 15(1):53-62.

Mann, Axel; Friedrich, Nikolas; Krarup, Anders; Weber, Jacqueline; Stiegeler, Emanuel; Dreier, Birgit; Pugach, Pavel; Robbiani, Melissa; Riedel, Tina; Moehle, Kerstin; Robinson, John A; Rusert, Peter; Plückthun, Andreas; Trkola, Alexandra (2013). Conformation-dependent recognition of HIV gp120 by designed ankyrin repeat proteins provides access to novel HIV entry inhibitors. Journal of Virology, 87(10):5868-5881.

Vratskikh, Oksana; Stiasny, Karin; Zlatkovic, Jürgen; Tsouchnikas, Georgios; Jarmer, Johanna; Karrer, Urs; Roggendorf, Michael; Roggendorf, Hedwig; Allwinn, Regina; Heinz, Franz X (2013). Dissection of antibody specificities induced by yellow fever vaccination. PLoS Pathogens, 9(6):e1003458.

Brennan, Daniel C; Aguado, José M; Potena, Luciano; Jardine, Alan G; Legendre, Christophe; Säemann, Marcus D; Mueller, Nicolas J; Merville, Pierre; Emery, Vincent; Nashan, Björn (2013). Effect of maintenance immunosuppressive drugs on virus pathobiology: evidence and potential mechanisms. Reviews in Medical Virology, 23(2):97-125.

Edinger, T O; Pohl, M O; Stertz, S (2013). Entry of influenza A virus: host factors and antiviral targets. Journal of General Virology, 95:263-277.

Faso, C; Konrad, C; Schraner, E M; Hehl, A B (2013). Export of cyst wall material and Golgi organelle neogenesis in Giardia lamblia depends on ER exit sites. Cellular Microbiology, 15(4):537-553.

Lange, C E; Vetsch, E; Ackermann, M; Favrot, C; Tobler, K (2013). Four novel papillomavirus sequences support a broad diversity among equine papillomaviruses. Journal of General Virology, 94(Pt 6):1365-1372.

Kouyos, Roger; Klein, Eili; Grenfell, Bryan (2013). Hospital-community interactions foster coexistence between methicillin-resistant strains of Staphylococcus aureus. PLoS Pathogens, 9(2):e1003134.

Deubelbeiss, A N; Trachsel, C; Bachli, E B; Kuffer, A; Budka, H; Eniseyskiy, P; Zimmermann, H; Wallace, R M; Farley, S; Zanoni, R G (2013). Imported human rabies in Switzerland, 2012: a diagnostic conundrum. Journal of Clinical Virology, 57(2):178-181.

González-Carmona, Maria A; Quasdorff, Maria; Vogt, Annabelle; Tamke, Anja; Yildiz, Yildiz; Hoffmann, Per; Lehmann, Thomas; Bartenschlager, Ralf; Engels, Joachim W; Kullak-Ublick, Gerd A; Sauerbruch, Tilman; Caselmann, Wolfgang H (2013). Inhibition of hepatitis C virus RNA translation by antisense bile acid conjugated phosphorothioate modified oligodeoxynucleotides (ODN). Antiviral Research, 97(1):49-59.

Hetzel, U; Sironen, T; Laurinmäki, P; Liljeroos, L; Patjas, A; Henttonen, H; Vaheri, A; Artelt, A; Kipar, A; Butcher, S J; Vapalahti, O; Hepojoki, J (2013). Isolation, identification, and characterization of novel arenaviruses, the etiological agents of boid inclusion body disease. Journal of Virology, 87(20):10918-10935.

Richter, Kirsten; Perriard, Guillaume; Behrendt, Rayk; Schwendener, Reto A; Sexl, Veronika; Dunn, Robert; Kamanaka, Masahito; Flavell, Richard A; Roers, Axel; Oxenius, Annette (2013). Macrophage and T cell produced IL-10 promotes viral chronicity. PLoS Pathogens, 9(11):e1003735.

Greber, Urs F; Arnberg, Niklas; Wadell, Göran; Benkő, Mária; Kremer, Eric J (2013). Meeting Report: Adenoviruses - from pathogens to therapeutics. Cellular Microbiology, 15(1):16-23.

Maier, Lisa; Vyas, Rounak; Cordova, Carmen Dolores; Lindsay, Helen; Schmidt, Thomas Sebastian Benedikt; Brugiroux, Sandrine; Periaswamy, Balamurugan; Bauer, Rebekka; Sturm, Alexander; Schreiber, Frank; von Mering, Christian; Robinson, Mark D; Stecher, Bärbel; Hardt, Wolf-Dietrich (2013). Microbiota-derived hydrogen fuels salmonella typhimurium invasion of the gut ecosystem. Cell Host & Microbe, 14(6):641-651.

Hächler, H; Marti, G; Giannini, P; Lehner, A; Jost, M; Beck, J; Weiss, F; Bally, B; Jermini, M; Stephan, R; Baumgartner, A (2013). Outbreak of listerosis due to imported cooked ham, Switzerland 2011. Eurosurveillance, 18(18):20469.

Steeb, Benjamin; Claudi, Beatrice; Burton, Neil A; Tienz, Petra; Schmidt, Alexander; Farhan, Hesso; Mazé, Alain; Bumann, Dirk (2013). Parallel Exploitation of Diverse Host Nutrients Enhances Salmonella Virulence. PLoS Pathogens, 9(4):e1003301.

Masimba, Pax; Kituma, Elimsaada; Klimkait, Thomas; Horvath, Edit; Stoeckle, Marcel; Hatz, Christoph; Mossdorf, Erick; Mwaigomole, Emmanuel; Khamis, Salim; Jullu, Boniphace; Abdulla, Salim; Tanner, Marcel; Felger, Ingrid (2013). Prevalence of drug resistance mutations and HIV type 1 subtypes in an HIV type 1-infected cohort in rural Tanzania. AIDS Research and Human Retroviruses, 29(9):1229-1236.

Kreizinger, Zsuzsa; Hornok, Sándor; Dán, Adám; Hresko, Stanislav; Makrai, László; Magyar, Tibor; Bhide, Mangesh; Erdélyi, Károly; Hofmann-Lehmann, Regina; Gyuranecz, Miklós (2013). Prevalence of francisella tularensis and francisella-like endosymbionts in the tick population of hungary and the genetic variability of francisella-like agents. Vector Borne and Zoonotic Diseases, 13(3):160-163.

Sauteur, Patrick M Meyer; Relly, Christa; Hug, Martina; Wittenbrink, Max M; Berger, Christoph (2013). Risk factors for invasive reptile-associated salmonellosis in children. Vector Borne and Zoonotic Diseases, 13(6):419-421.

Engler, O; Klingstrom, J; Aliyev, E; Niederhauser, C; Fontana, S; Strasser, M; Portmann, J; Signer, J; Bankoul, S; Frey, F; Hatz, C; Stutz, A; Tschaggelar, A; Mütsch, Margot (2013). Seroprevalence of hantavirus infections in Switzerland in 2009: difficulties in determining prevalence in a country with low endemicity. Eurosurveillance, 18(50):20660.

Hornok, Sándor; Csörgő, Tibor; de la Fuente, José; Gyuranecz, Miklós; Privigyei, Csaba; Meli, Marina L; Kreizinger, Zsuzsa; Gönczi, Enikő; Fernández de Mera, Isabel G; Hofmann-Lehmann, Regina (2013). Synanthropic birds associated with high prevalence of tick-borne rickettsiae and with the first detection of rickettsia aeschlimannii in Hungary. Vector Borne and Zoonotic Diseases, 13(2):77-83.

Jelcic, I; Aly, L; Binder, T M C; Jelcic, I; Bofill-Mas, S; Planas, R; Demina, V; Eiermann, T H; Weber, T; Girones, R; Sospedra, M; Martin, R (2013). T cell epitope mapping of JC polyoma virus-encoded proteome reveals reduced T cell responses in HLA-DRB1*04:01+ donors. Journal of Virology, 87(6):3393-3408.

George, Christine Marie; Inauen, Jennifer; Rahman, Sheikh Masudur; Zheng, Yan (2013). The effectiveness of educational interventions to enhance the adoption of fee-based arsenic testing in Bangladesh: a cluster randomized controlled trial. American Journal of Tropical Medicine and Hygiene, 89(1):138-144.

Johnson, Victoria A; Calvez, Vincent; Gunthard, Huldrych F; Paredes, Roger; Pillay, Deenan; Shafer, Robert W; Wensing, Annemarie M; Richman, Douglas D (2013). Update of the drug resistance mutations in HIV-1: March 2013. Topics in Antiviral Medicine, 21(1):6-14.

Mercer, Jason; Greber, Urs F (2013). Virus interactions with endocytic pathways in macrophages and dendritic cells. Trends in Microbiology, 21(8):380-388.

Zabel, Franziska; Kündig, Thomas M; Bachmann, Martin F (2013). Virus-induced humoral immunity: on how B cell responses are initiated. Current Opinion in Virology, 3(3):357-362.

2012

Jurgeit, Andreas; McDowell, Robert; Moese, Stefan; Meldrum, Eric; Schwendener, Reto; Greber, Urs F (2012). Niclosamide is a proton carrier and targets acidic endosomes with broad antiviral effects. PLoS Pathogens, 8(10):e1002976.

Schliehe, Christopher; Bitzer, Annegret; van den Broek, Maries; Groettrup, Marcus (2012). Stable antigen is most effective for eliciting CD8+ T-cell responses after DNA vaccination and infection with recombinant vaccinia virus in vivo. Journal of Virology, 86(18):9782-9793.

Yakimovich, A; Gumpert, H; Burckhardt, C J; Lutschg, V A; Jurgeit, A; Sbalzarini, I F; Greber, U F (2012). Cell-free transmission of human adenovirus by passive mass transfer in cell culture simulated in a computer model. Journal of Virology, 86(18):10123-10137.

Wild, Peter; de Oliveira, Anna Paula; Sonda, Sabrina; Schraner, Elisabeth M; Ackermann, Mathias; Tobler, Kurt (2012). The herpes simplex virus 1 U(S)3 regulates phospholipid synthesis. Virology, 432(2):353-360.

Schubert, Mario; Bleuler-Martinez, Silvia; Butschi, Alex; Wälti, Martin A; Egloff, Pascal; Stutz, Katrin; Yan, Shi; Wilson, Iain B H; Hengartner, Michael O; Aebi, Markus; Allain, Frédéric H-T; Künzler, Markus (2012). Plasticity of the β-Trefoil Protein Fold in the Recognition and Control of Invertebrate Predators and Parasites by a Fungal Defence System. PLoS Pathogens, 8(5):e1002706.

Sutter, Esther; de Oliveira, Anna Paula; Tobler, Kurt; Schraner, Elisabeth M; Sonda, Sabrina; Kaech, Andres; Lucas, Miriam S; Ackermann, M; Wild, Peter (2012). Herpes simplex virus 1 induces de novo phospholipid synthesis. Virology, 429(2):124-135.

Günther, V; Strassen, T; Lindert, U; Dagani, P; Waldvogel, D; Georgiev, O; Schaffner, W; Bethge, T (2012). Simian virus 40 (SV40) strains with novel properties generated by replacing the viral enhancer with synthetic oligonucleotides. Journal of Virology, 86(6):3135-3142.

Ruhl, Marianne; Chhatwal, Patrick; Strathmann, Heiko; Kuntzen, Thomas; Bankwitz, Dorothea; Skibbe, Kathrin; Walker, Andreas; Heinemann, Falko M; Horn, Peter A; Allen, Todd M; Hoffmann, Daniel; Pietschmann, Thomas; Timm, Jörg (2012). Escape from a dominant HLA-B*15-restricted CD8+ T cell response against hepatitis C virus requires compensatory mutations outside the epitope. Journal of Virology, 86(2):991-1000.

Medlock, J M; Hansford, K M; Schaffner, Francis; Versteirt, V; Hendrickx, G; Zeller, H; Van Bortel, W (2012). A review of the invasive mosquitoes in Europe: Ecology, public health risks, and control options. Vector-Borne and Zoonotic Diseases, 12(6):435-447.

Vogel, R; Seyffert, M; Strasser, R; de Oliveira, A P; Dresch, C; Glauser, D L; Jolinon, N; Salvetti, A; Weitzman, M D; Fraefel, C; Ackermann, M (2012). Adeno-associated virus type 2 modulates the host DNA damage response induced by herpes simplex virus type 1 during co-infection. Journal of Virology, 86(1):143-155.

Trinh, H V; Lesage, G; Chennamparampil, V; Vollenweider, B; Burckhardt, C J; Schauer, S; Havenga, M; Greber, U F; Hemmi, S (2012). Avidity binding of human adenovirus serotypes 3 and 7 to the membrane cofactor CD46 triggers infection. Journal of Virology, 86(3):1623-1637.

Abela, Irene A; Berlinger, Livia; Schanz, Merle; Reynell, Lucy; Günthard, Huldrych F; Rusert, Peter; Trkola, Alexandra (2012). Cell-cell transmission enables HIV-1 to evade inhibition by potent CD4bs directed antibodies. PLoS Pathogens, 8(4):e1002634.

Uchiyama, Satoshi; Andreoni, Federica; Schuepbach, Reto A; Nizet, Victor; Zinkernagel, Annelies S (2012). DNase Sda1 allows invasive M1T1 Group A Streptococcus to prevent TLR9-dependent recognition. PLoS Pathogens, 8(6):e1002736.

Smajlović, Lejla; Davoren, Jon; Heyman, Paul; Cochez, Christel; Haas, Cordula; Maake, Caroline; Hukić, Mirsada (2012). Development and optimization of a PCR assay for detection of Dobrava and Puumala hantaviruses in Bosnia and Herzegovina. Journal of Virological Methods, 182(1-2):37-42.

Sais, Giovanni; Wyler, Stephen; Hudolin, Tvrtko; Banzola, Irina; Mengus, Chantal; Bubendorf, Lukas; Wild, Peter J; Hirsch, Hans H; Sulser, Tullio; Spagnoli, Giulio C; Provenzano, Maurizio (2012). Differential patterns of Large Tumor Antigen specific immune responsiveness in patients with BK polyomavirus positive prostate cancer or benign prostatic hyperplasia. Journal of Virology, 86(16):8461-8471.

Lange, C E; Ackermann, M; Favrot, C; Tobler, K (2012). Entire genomic sequence of novel canine papillomavirus type 13. Journal of Virology, 86(18):10226-10227.

Wollersheim, Sonja; Fedarava, Katisaryna; Huebler, Michael; Schneiderhan-Marra, Nicole; Berger, Felix; Miera, Oliver; Schmitt, Katharina R (2012). Establishment of a coculture model for studying inflammation after pediatric cardiopulmonary bypass: from bench to bedside. Journal of Interferon & Cytokine Research, 32(6):269-276.

Aguzzi, Adriano; Zhu, Caihong (2012). Five questions on prion diseases. PLoS Pathogens, 8(5):e1002651.

Bargielowski, Irka; Kaufmann, Christian; Alphey, Luke; Reiter, Paul; Koella, Jacob (2012). Flight performance and teneral energy reserves of two genetically-modified and one wild-type strain of the yellow fever mosquito Aedes aegypti. Vector Borne and Zoonotic Diseases, 12(12):1053-1058.

Mekker, Andrea; Tchang, Vincent S; Haeberli, Lea; Oxenius, Annette; Trkola, Alexandra; Karrer, Urs (2012). Immune senescence: relative contributions of age and cytomegalovirus infection. PLoS Pathogens, 8(8):e1002850.

Barat, Somedutta; Willer, Yvonne; Rizos, Konstantin; Claudi, Beatrice; Mazé, Alain; Schemmer, Anne K; Kirchhoff, Dennis; Schmidt, Alexander; Burton, Neil; Bumann, Dirk (2012). Immunity to Intracellular Salmonella Depends on Surface-associated Antigens. PLoS Pathogens, 8(10):e1002966.

Gautret, P; Cramer, J P; Field, V; Caumes, E; Jensenius, M; Gkrania-Klotsas, E; de Vries, P J; Grobusch, M P; Lopez-Velez, R; Castelli, F; Schlagenhauf, Patricia; Hervius Askling, H; von Sonnenburg, F; Lalloo, D G; Loutan, L; Rapp, C; Basto, F; Santos O'Connor, F; Weld, L; Parola, Philippe (2012). Infectious diseases among travellers and migrants in Europe, EuroTravNet 2010. Euro Surveillance, 17(26):pii: 20205.

O'Connor, Tracy; Frei, Nathalie; Sponarova, Jana; Schwarz, Petra; Heikenwalder, Mathias; Aguzzi, Adriano (2012). Lymphotoxin, but Not TNF, Is Required for Prion Invasion of Lymph Nodes. PLoS Pathogens, 8(8):e1002867.

Misselwitz, Benjamin; Barrett, Naomi; Kreibich, Saskia; Vonaesch, Pascale; Andritschke, Daniel; Rout, Samuel; Weidner, Kerstin; Sormaz, Milos; Songhet, Pascal; Horvath, Peter; Chabria, Mamta; Vogel, Viola; Spori, Doris M; Jenny, Patrick; Hardt, Wolf-Dietrich (2012). Near surface swimming of Salmonella Typhimurium explains target-site selection and cooperative invasion. PLoS Pathogens, 8(7):e1002810.

Tracy, Sean I; Kakalacheva, Kristina; Lünemann, Jan D; Luzuriaga, Katherine; Middeldorp, Jaap; Thorley-Lawson, David A (2012). Persistence of Epstein-Barr virus in self-reactive memory B cells. Journal of Virology, 86(22):12330-12340.

Gyuranecz, Miklós; Dénes, Béla; Hornok, Sándor; Kovács, Péter; Horváth, Gábor; Jurkovich, Viktor; Varga, Tamás; Hajtós, István; Szabó, Réka; Magyar, Tibor; Vass, Nóra; Hofmann-Lehmann, Regina; Erdélyi, Károly; Bhide, Mangesh; Dán, Ádám (2012). Prevalence of Coxiella burnetii in Hungary: screening of dairy cows, sheep, commercial milk samples, and ticks. Vector Borne and Zoonotic Diseases, 12(8):650-653.

Falsig, Jeppe; Sonati, Tiziana; Herrmann, Uli S; Saban, Dino; Li, Bei; Arroyo, Karina; Ballmer, Boris; Liberski, Pawel P; Aguzzi, Adriano (2012). Prion pathogenesis is faithfully reproduced in cerebellar organotypic slice cultures. PLoS Pathogens, 8(11):e1002985.

De Lorenzo, G; Eichwald, C; Schraner, E M; Nicolin, V; Bortul, R; Mano, M; Burrone, O R; Arnoldi, F (2012). Production of in vivo-biotinylated rotavirus particles. Journal of General Virology, 93(Pt7):1474-1482.

Stiasny, K; Aberle, J H; Chmelik, V; Karrer, U; Holzmann, H; Heinz, F X (2012). Quantitative determination of IgM antibodies reduces the pitfalls in the serodiagnosis of tick-borne encephalitis. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, 54(2):115-120.

Schlagenhauf, Patricia; Petersen, Eskild (2012). Standby emergency treatment of malaria in travelers: experience to date and new developments. Expert Review of Anti-infective Therapy, 10(5):537-546.

Grütter, Markus G; Luban, Jeremy (2012). TRIM5 structure, HIV-1 capsid recognition, and innate immune signaling. Current Opinion in Virology, 2(2):142-150.

Althaus, Claudia F; Vongrad, Valentina; Niederöst, Barbara; Joos, Beda; Di Giallonardo, Francesca; Rieder, Philip; Pavlovic, Jovan; Trkola, Alexandra; Günthard, Huldrych F; Metzner, Karin J; Fischer, Marek (2012). Tailored enrichment strategy detects low abundant small noncoding RNAs in HIV-1 infected cells. Retrovirology, 9:27.

Duncan, A J; Gunn, G J; Lewis, F I; Umstatter, C; Humphry, R W (2012). The influence of empirical contact networks on modelling diseases in cattle. Epidemics, 4(3):117-123.

Werner, D; Kronefeld, M; Schaffner, Francis; Kampen, H (2012). Two invasive mosquito species, Aedes albopictus and Aedes japonicus japonicus, trapped in south-west Germany, July to August 2011. Eurosurveillance, 17(4):pii20067.

Henn, Matthew R; Boutwell, Christian L; Charlebois, Patrick; Lennon, Niall J; Power, Karen A; Macalalad, Alexander R; Berlin, Aaron M; Malboeuf, Christine M; Ryan, Elizabeth M; Gnerre, Sante; Zody, Michael C; Erlich, Rachel L; Green, Lisa M; Berical, Andrew; Wang, Yaoyu; Casali, Monica; Streeck, Hendrik; Bloom, Allyson K; Dudek, Tim; Tully, Damien; Newman, Ruchi; Axten, Karen L; Gladden, Adrianne D; Battis, Laura; Kemper, Michael; Zeng, Qiandong; Shea, Terrance P; Gujja, Sharvari; Zedlack, Carmen; Gasser, Olivier; Brander, Christian; Hess, Christoph; Günthard, Huldrych F; Brumme, Zabrina L; Brumme, Chanson J; Bazner, Suzane; Rychert, Jenna; Tinsley, Jake P; Mayer, Ken H; Rosenberg, Eric; Pereyra, Florencia; Levin, Joshua Z; Young, Sarah K; Jessen, Heiko; Altfeld, Marcus; Birren, Bruce W; Walker, Bruce D; Allen, Todd M (2012). Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection. PLoS Pathogens, 8(3):e1002529.

2011

Kelly, B J; Mijatov, Branka; Fraefel, C; Cunningham, A L; Diefenbach, R J (2011). Identification of a single amino acid residue which is critical for the interaction between HSV-1 inner tegument proteins pUL36 and pUL37. Virology:1-9.

Strunze, S; Engelke, M F; Wang, I-H; Puntener, D; Boucke, K; Schleich, S; Way, M; Schoenenberger, P; Burckhardt, C J; Greber, U F (2011). Kinesin-1-mediated capsid disassembly and disruption of the nuclear pore complex promote virus infection. Cell Host & Microbe, 10(3):210-223.

Villaudy, J; Wencker, M; Gadot, N; Gillet, N A; Scoazec, J Y; Gazzalo, L; Manz, M G; Bangham, C R; Dodon, M D (2011). HTLV-1 propels thymic human T cell development in "human immune system" Rag2⁻/⁻ gamma c⁻/⁻ mice. PLoS Pathogens, 7(9):e1002231.

Wisskirchen, C; Ludersdorfer, T H; Müller, D A; Moritz, E; Pavlovic, J (2011). The cellular RNA helicase UAP56 is required for prevention of double-stranded RNA formation during influenza A virus infection. Journal of Virology, 85(17):8646-8655.

Münz, C (2011). Beclin-1 targeting for viral immune escape. Viruses, 3(7):1166-1178.

Dewals, B; Myster, F; Palmeira, L; Gillet, L; Ackermann, M; Vanderplasschen, A (2011). Ex vivo bioluminescence detection of alcelaphine herpesvirus 1 infection during malignant catarrhal fever. Journal of Virology, 85(14):6941-6954.

Lalonde, M S; Lobritz, M A; Ratcliff, A; Chamanian, M; Athanassiou, Z; Tyagi, M; Wong, J; Robinson, J A; Karn, J; Varani, G; Arts, E (2011). Inhibition of both HIV-1 reverse transcription and gene expression by a cyclic peptide that binds the Tat-transactivating response element (TAR) RNA. PLoS Pathogens, 7(5):e1002038.

Hughes, David J; Kipar, Anja; Leeming, Gail H; Bennett, Elaine; Howarth, Deborah; Cummerson, Joanne A; Papoula-Pereira, Rita; Flanagan, Brian F; Sample, Jeffery T; Stewart, James P (2011). Chemokine binding protein M3 of murine gammaherpesvirus 68 modulates the host response to infection in a natural host. PLoS Pathogens, 7(3):e1001321.

Engelke, M F; Burckhardt, C J; Morf, M K; Greber, U F (2011). The dynactin complex enhances the speed of microtubule-dependent motions of adenovirus both towards and away from the nucleus. Viruses, 3(3):233-253.

Johnson, V A; Calvez, V; Gunthard, H F; Paredes, R; Pillay, D; Shafer, R; Wensing, A M; Richman, D D (2011). 2011 update of the drug resistance mutations in HIV-1. Topics in Antiviral Medicine, 19(4):156-164.

Haybaeck, J; Heikenwalder, M; Klevenz, B; Schwarz, P; Margalith, I; Bridel, C; Mertz, K D; Zirdum, E; Petsch, B; Fuchs, T J; Stitz, L; Aguzzi, A (2011). Aerosols transmit prions to immunocompetent and immunodeficient mice. PLoS Pathogens, 7(1):e1001257.

Oufir, M; Bisset, L R; Hoffmann, S R K; Xue, G; Klauser, S; Bergamaschi, B; Gervaix, A; Böni, J; Schüpbach, J; Gutte, B (2011). Artificial 64-residue HIV-1 enhancer-binding peptide is a potent inhibitor of viral replication in HIV-1-infected cells. Advances in Virology, 2011:165871.

Kouyos, R D; von Wyl, V; Hinkley, T; Petropoulos, C J; Haddad, M; Whitcomb, J M; Böni, J; Yerly, S; Cellerai, C; Klimkait, T; Günthard, H F; Bonhoeffer, S (2011). Assessing predicted HIV-1 replicative capacity in a clinical setting. PLoS Pathogens, 7(11):e1002321.

Khaiseb, S; Sydler, T; Zimmermann, D R; Pospischil, A; Sidler, X; Brugnera, E (2011). Coreplication of the major genotype group members of porcine circovirus type 2 as a prerequisite to coevolution may explain the variable disease manifestations. Journal of Virology, 85(21):11111-11120.

Burckhardt, C J; Suomalainen, M; Schoenenberger, P; Boucke, K; Hemmi, S; Greber, U F (2011). Drifting Motions of the Adenovirus Receptor CAR and Immobile Integrins Initiate Virus Uncoating and Membrane Lytic Protein Exposure. Cell Host & Microbe, 10(2):105-117.

Audigé, Annette; Hofer, Ursula; Dittmer, Ulf; van den Broek, Maries; Speck, Roberto F (2011). Evaluation of the immunomodulatory and antiviral effects of the cytokine combination IFN-α and IL-7 in the lymphocytic choriomeningitis virus and Friend retrovirus mouse infection models. Viral Immunology, 24(5):375-85.

Geret, C P; Cattori, V; Meli, Marina L; Riond, Barbara; Martínez, F; López, G; Vargas, A; Simón, M A; López-Bao, J V; Hofmann-Lehmann, R; Lutz, H (2011). Feline leukemia virus outbreak in the critically endangered Iberian lynx (Lynx pardinus): high-throughput sequencing of envelope variable region A and experimental transmission. Archives of Virology, 156(5):839-854.

Hornok, S; de la Fuente, J; Biró, N; Fernández de Mera, I G; Meli, Marina L; Elek, V; Gönczi, E; Meili, T; Tánczos, B; Farkas, R; Lutz, H; Hofmann-Lehmann, R (2011). First molecular evidence of Anaplasma ovis and Rickettsia spp. in keds (Diptera: Hippoboscidae) of sheep and wild ruminants. Vector Borne and Zoonotic Diseases, 11(10):1319-1321.

Hemmi, S; Vidovszky, M Z; Ruminska, J; Ramelli, S; Decurtins, W; Greber, U F; Harrach, B (2011). Genomic and phylogenetic analyses of murine adenovirus 2. Virus Research, 160(1-2):128-135.

Knoepfel, S A; Di Giallonardo, F; Däumer, M; Thielen, A; Metzner, K J (2011). In-depth analysis of G-to-A hypermutation rate in HIV-1 env DNA induced by endogenous APOBEC3 proteins using massively parallel sequencing. Journal of Virological Methods, 171(2):329-338.

Kovari, H; Weber, R (2011). Influence of antiretroviral therapy on liver disease. Current Opinion in HIV and AIDS, 6(4):272-277.

Glauser, D L; Fraefel, C (2011). Interactions between AAV-2 and HSV-1: implications for hybrid vector design. Future Virology, 6(4):483-501.

Magenta, L; Dell-Kuster, S; Richter, W O; Young, J; Hasse, B; Flepp, M; Hirschel, B; Vernazza, P; Evison, J; Cavassini, M; Decosterd, L A; Bucher, H C; Bernasconi, E (2011). Lipid and lipoprotein profile in HIV-infected patients treated with Lopinavir/Ritonavir as a component of the first combination antiretroviral therapy. AIDS Research and Human Retroviruses, 27(5):525-533.

Lange, C E; Favrot, C; Ackermann, M; Gull, J; Vetsch, E; Tobler, K (2011). Novel snake papillomavirus does not cluster with other non-mammalian papillomaviruses. Virology Journal, 8:436.

Metzner, K J; Rauch, P; Braun, P; Knechten, H; Ehret, R; Korn, K; Kaiser, R; Sichtig, N; Ranneberg, B; van Lunzen, J; Walter, H (2011). Prevalence of key resistance mutations K65R, K103N, and M184V as minority HIV-1 variants in chronically HIV-1 infected, treatment-naïve patients. Journal of Clinical Virology, 50(2):156-161.

Ligios, C; Cancedda, M G; Carta, A; Santucciu, C; Maestrale, C; Demontis, F; Sabat, M; Patta, C; Demartini, J C; Aguzzi, A; Sigurdson, C J (2011). Sheep with scrapie and mastitis transmit infectious prions through the milk. Journal of Virology, 85(2):1136-1139.

Püntener, D; Engelke, M F; Ruzsics, Z; Strunze, S; Wilhelm, C; Greber, U F (2011). Stepwise loss of fluorescent core protein V from human adenovirus during entry into cells. Journal of Virology, 85(1):481-496.

Iwata, R; Stieger, B; Mertens, J C; Müller, T; Baur, K; Frei, P; Braun, J; Vergopoulos, A; Martin, I V; Schmitt, J; Goetze, O; Bibert, S; Bochud, P Y; Müllhaupt, B; Berg, T; Geier, A (2011). The role of bile acid retention and a common polymorphism in the ABCB11 gene as host factors affecting antiviral treatment response in chronic hepatitis C. Journal of Viral Hepatitis, 18(11):768-778.

Ayers, J I; Schutt, C R; Shikiya, R A; Aguzzi, A; Kincaid, A E; Bartz, J C (2011). The strain-encoded relationship between PrP replication, stability and processing in neurons is predictive of the incubation period of disease. PLoS Pathogens, 7(3):e1001317.

Greber, U F; Cosset, F L (2011). Too smart to fail—how viruses exploit the complexity of host cells during entry. Current Opinion in Virology, 1(1):3-5.

Seto, D; Chodosh, J; Brister, J R; Jones, M S (2011). Using the whole-genome sequence to characterize and name human adenoviruses. Journal of Virology, 85(11):5701-5702.

2010

van der Ploeg, Jan R (2010). Genome sequence of the temperate bacteriophage PH10 from Streptococcus oralis. Virus Genes, 41(3):450-458.

Scholte, E J; Den Hartog, W; Dik, M; Schoelitsz, B; Brooks, M; Schaffner, Francis; Foussadier, R; Braks, M; Beeuwkes, J (2010). Introduction and control of three invasive mosquito species in the Netherlands, July-October 2010. Eurosurveillance, 15(45):19710.

Tekes, G; Hofmann-Lehmann, R; Bank-Wolf, B; Maier, R; Thiel, H J; Thiel, V (2010). Chimeric feline coronaviruses that encode type II spike protein on type I genetic background display accelerated viral growth and altered receptor usage. Journal of Virology, 84(3):1326-1333.

Jurgeit, A; Moese, S; Roulin, P; Dorsch, A; Lötzerich, M; Lee, W M; Greber, U F (2010). An RNA replication-center assay for high content image-based quantifications of human rhinovirus and coxsackievirus infections. Virology Journal, 7(1):264.

Dorner, M; Zucol, F; Alessi, D; Haerle, S K; Bossart, W; Weber, M; Byland, R; Bernasconi, M; Berger, C; Tugizov, S; Speck, R F; Nadal, D (2010). {beta}1 Integrin Expression Increases Susceptibility of Memory B-Cells to EBV Infection. Journal of Virology, 84(13):6667-6677.

Gabev, E; Tobler, K; Abril, C; Hilbe, M; Senn, C; Franchini, M; Campadelli-Fiume, G; Fraefel, C; Ackermann, M (2010). Glycoprotein D of bovine herpesvirus 5 (BoHV-5) confers an extended host range to BoHV-1 but does not contribute to invasion of the brain. Journal of Virology, 84(11):5583-5593.

Kälin, S; Amstutz, B; Gastaldelli, M; Wolfrum, N; Boucke, K; Havenga, M; Digennaro, F; Liska, N; Hemmi, S; Greber, U F (2010). Macropinocytotic uptake and infection of human epithelial cells with species B2 adenovirus type 35. Journal of Virology, 84(10):5336-5350.

Hofer, U; Schlaepfer, E; Baenziger, S; Nischang, M; Regenass, S; Schwendener, R; Kempf, W; Nadal, D; Speck, R F (2010). Inadequate clearance of translocated bacterial products in HIV-infected humanized mice. PLoS Pathogens, 6(4):e1000867.

Konrad, C; Spycher, C; Hehl, A B (2010). Selective condensation drives partitioning and sequential secretion of cyst wall proteins in differentiating giardia lamblia. PLoS Pathogens, 6(4):e1000835.

Kipar, A; Meli, M L; Baptiste, K E; Bowker, L J; Lutz, H (2010). Sites of feline coronavirus persistence in healthy cats. Journal of General Virology, 91(7):1698-1707.

Torgerson, P R; Torgerson, D (2010). Public health and bovine tuberculosis: what's all the fuss about? Trends in Microbiology, 18(2):67-72.

Kwok, T; Helfer, H; Alam, M I; Heinrich, J; Pavlovic, J; Moelling, K (2010). Inhibition of influenza A virus replication by short double-stranded oligodeoxynucleotides. Archives of Virology, 154(1):109-14.

Song, J; Willinger, T; Rongvaux, A; Eynon, E E; Stevens, S; Manz, M G; Flavell, R A; Galán, J E (2010). A mouse model for the human pathogen Salmonella typhi. Cell Host & Microbe, 8(4):369-376.

Fontecedro, A C; Lutschg, V; Eichhoff, O; Dummer, R; Greber, U F; Hemmi, S (2010). Analysis of adenovirus trans-complementation-mediated gene expression controlled by melanoma-specific TETP promoter in vitro. Virology Journal, 7(1):175.

Audigé, A; Schlaepfer, E; von Wyl, V; Miller, R C; Vernazza, P; Nadal, D; Speck, R F (2010). B cells from HIV-infected patients with primary central nervous system lymphoma display an activated phenotype and have a blunted TNF-α response to TLR9 triggering. AIDS Research and Human Retroviruses, 26(10):1063-1074.

Butschi, A; Titz, A; Wälti, M A; Olieric, V; Paschinger, K; Nöbauer, K; Guo, X; Seeberger, P H; Wilson, I B H; Aebi, M; Hengartner, M O; Künzler, M (2010). Caenorhabditis elegans N-glycan core beta-galactoside confers sensitivity towards nematotoxic fungal galectin CGL2. PLoS Pathogens, 6(1):e1000717.

Helfer-Hungerbuehler, A K; Cattori, V; Boretti, Felicitas S; Ossent, Pete; Grest, Paula; Reinacher, M; Henrich, M; Bauer, E; Bauer-Pham, K; Niederer, E; Holznagel, E; Lutz, H; Hofmann-Lehmann, R (2010). Dominance of highly divergent feline leukemia virus A progeny variants in a cat with recurrent viremia and fatal lymphoma. Retrovirology, 7(1):14.

Kobayashi, A; Sakuma, N; Matsuura, Y; Mohri, S; Aguzzi, A; Kitamoto, T (2010). Experimental verification of a traceback phenomenon in prion infection. Journal of Virology, 84(7):3230-3238.

Rotger, M; Dang, K K; Fellay, J; Heinzen, E L; Feng, S; Descombes, P; Shianna, K V; Ge, D; Günthard, H F; Goldstein, D B; Telenti, A (2010). Genome-wide mRNA expression correlates of viral control in CD4+ T-cells from HIV-1-infected individuals. PLoS Pathogens, 6(2):e1000781.

Akgül, B; Bostanci, N; Westphal, K; Nindl, I; Navsaria, H; Storey, A; Pfister, H (2010). Human papillomavirus 5 and 8 E6 downregulate interleukin-8 secretion in primary human keratinocytes. Journal of General Virology, 91(4):888-892.

Glauser, D L; Seyffert, M; Strasser, R; Franchini, M; Laimbacher, A S; Dresch, C; de Oliveirea, A P; Vogel, R; Büning, H; Salvetti, A; Ackermann, M; Fraefel, C (2010). Inhibition of herpes simplex virus type 1 replication by Adeno-associated virus rep proteins depends on their combined DNA-binding and ATPase/Helicase activities. Journal of Virology, 84(8):3808 -3824.

Aguilar, C; Vlamakis, H; Guzman, A; Losick, R; Kolter, R (2010). Kind is a checkpoint protein linking spore formation to extracellular-matrix production in bacillus subtilis biofilms. mBio, 1(1):e00035.

Stecher, B; Chaffron, S; Käppeli, R; Hapfelmeier, S; Freedrich, S; Weber, T C; Kirundi, J; Suar, M; McCoy, K D; von Mering, C; Macpherson, A J; Hardt, W D (2010). Like will to like: abundances of closely related species can predict susceptibility to intestinal colonization by pathogenic and commensal bacteria. PLoS Pathogens, 6(1):e1000711.

Audigé, A; Taffé, P; Rickenbach, M; Battegay, M; Vernazza, P; Nadal, D; Speck, R (2010). Low postseroconversion CD4 count and rapid decrease of CD4 density identify HIV+ fast progressors. AIDS Research and Human Retroviruses, 26(9):997-1005.

Osih, R B; Taffé, P; Rickenbach, M; Gayet-Ageron, A; Elzi, L; Fux, C; Opravil, M; Bernasconi, E; Schmid, P; Günthard, H F; Cavassini, M (2010). Outcomes of patients on dual-boosted PI regimens: experience of the Swiss HIV cohort study. AIDS Research and Human Retroviruses, 26(11):1239-1246.

Alizon, S; von Wyl, V; Stadler, T; Kouyos, R D; Yerly, S; Hirschel, B; Böni, J; Shah, C; Klimkait, T; Furrer, H; Rauch, A; Vernazza, P L; Bernasconi, E; Battegay, M; Bürgisser, P; Telenti, A; Günthard, H F; Bonhoeffer, S; Swiss HIV Cohort Study (2010). Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load. PLoS Pathogens, 6(9):e1001123.

Huber, H; Koller, S; Giezendanner, N; Stephan, R; Zweifel, C (2010). Prevalence and characteristics of meticillin-resistant Staphylococcus aureus in humans in contact with farm animals, in livestock, and in food of animal origin, Switzerland, 2009. Eurosurveillance, 15(16):19542.

Althaus, C F; Gianella, S; Rieder, P; von Wyl, V; Kouyos, R D; Niederöst, B; Schmid, A; Metzner, K J; Joos, B; Günthard, H F; Fischer, M (2010). Rational design of HIV-1 fluorescent hydrolysis probes considering phylogenetic variation and probe performance. Journal of Virological Methods, 165(2):151-160.

Chow, O A; von Köckritz-Blickwede, M; Bright, A T; Hensler, M E; Zinkernagel, A S; Cogen, A L; Gallo, R L; Monestier, M; Wang, Y; Glass, C K; Nizet, V (2010). Statins enhance formation of phagocyte extracellular traps. Cell Host & Microbe, 8(5):445-454.

Flatz, L; Rieger, T; Merkler, D; Bergthaler, A; Regen, T; Schedensack, M; Bestmann, L; Verschoor, A; Kreutzfeldt, M; Brück, W; Hanisch, U K; Günther, S; Pinschewer, D D (2010). T cell-dependence of Lassa fever pathogenesis. PLoS Pathogens, 6(3):e1000836.

Vayssier-Taussat, Muriel; Le Rhun, Danielle; Deng, Hong Kuan; Biville, Francis; Cescau, Sandra; Danchin, Antoine; Marignac, Geneviève; Lenaour, Evelyne; Boulouis, Henri Jean; Mavris, Maria; Arnaud, Lionel; Yang, Huanming; Wang, Jing; Quebatte, Maxime; Engel, Philipp; Saenz, Henri; Dehio, Christoph (2010). The Trw Type IV Secretion System of Bartonella Mediates Host-Specific Adhesion to Erythrocytes. PLoS Pathogens, 6(6):e1000946.

Drogan, D; Rauch, P; Hoffmann, D; Walter, H; Metzner, K J (2010). The antiretroviral potency of emtricitabine is approximately 3-fold higher compared to lamivudine in dual human immunodeficiency virus type 1 infection/competition experiments in vitro. Antiviral Research, 86(3):312-315.

Endt, K; Stecher, B; Chaffron, S; Slack, E; Tchitchek, N; Benecke, A; Van Maele, L; Sirard, J-C; Mueller, A J; Heikenwalder, M; Macpherson, A J; Strugnell, R; von Mering, C; Hardt, W-D (2010). The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea. PLoS Pathogens, 6(9):e1001097.

Tietche, F; Chelo, D; Mina Ntoto, N K; Djoukoue, F M; Hatz, C; Frey, S; Frentzel, A; Trapp, S; Zielonka, R; Mueller, E A (2010). Tolerability and efficacy of a pediatric granule formulation of artesunate-mefloquine in young children from Cameroon with uncomplicated falciparum malaria. American Journal of Tropical Medicine and Hygiene, 82(6):1034-1040.

Veit, O; Hatz, C; Niedrig, M; Furrer, H J (2010). Yellow fever vaccination in HIV-infected patients. HIV Therapy, 4(1):17-26.

2009

Clerc, O; Cavassini, M; Böni, J; Schüpbach, J; Bürgisser, P (2009). Prolonged seroconversion in an elite controller of HIV-1 infection. Journal of Clinical Virology, 46(4):371-373.

Burckhardt, C J; Greber, U F (2009). Virus movements on the plasma membrane support infection and transmission between cells. PLoS Pathogens, 5(11):e1000621.

Imelli, N; Ruzsics, Z; Puntener, D; Gastaldelli, M; Greber, U F (2009). Genetic reconstitution of the human adenovirus type 2 temperature-sensitive 1 mutant defective in endosomal escape. Virology Journal, 6:174.

Gautret, P; Clerinx, J; Caumes, E; Simon, F; Jensenius, M; Loutan, L; Schlagenhauf, Patricia; Castelli, F; Freedman, D; Miller, A; Bronner, U; Parola, P (2009). Imported human African trypanosomiasis in Europe, 2005-2009. Euro Surveillance, 14(36):1-3.

Müller, A J; Hoffmann, C; Galle, M; van den Broeke, A; Heikenwalder, M; Falter, L; Misselwitz, B; Kremer, M; Beyaert, R; Hardt, W D (2009). The S. Typhimurium effector SopE induces caspase-1 activation in stromal cells to initiate gut inflammation. Cell Host & Microbe, 6(2):125-136.

Lange, C E; Tobler, K; Ackermann, M; Panakova, L; Thoday, K L; Favrot, C (2009). Three novel canine papillomaviruses support taxonomic clade formation. Journal of General Virology, 90(Pt 11):2615-2621.

Legrand, N; Ploss, A; Balling, R; Becker, P D; Borsotti, C; Brezillon, N; Debarry, J; De Jong, Y; Deng, H; Di Santo, J P; Eisenbarth, S; Eynon, E; Flavell, R A; Guzman, C A; Huntington, N D; Kremsdorf, D; Manns, M P; Manz, M G; Mention, J J; Ott, M; Rathinam, C; Rice, C M; Rongvaux, A; Stevens, S; Spits, H; Strick-Marchand, H; Takizawa, H; van Lent, A U; Wang, C; Weijer, K; Willinger, T; Ziegler, P (2009). Humanized mice for modeling human infectious disease: challenges, progress, and outlook. Cell Host & Microbe, 6(1):5-9.

Kelly, B J; Fraefel, C; Cunningham, A L; Diefenbach, R J (2009). Functional roles of the tegument proteins of herpes simplex virus type 1. Virus Research, 145(2):173-186.

Rittirsch, D; Flierl, M A; Day, D E; Nadeau, B A; Zetoune, F S; Sarma, J V; Werner, C M; Wanner, G A; Simmen, H P; Huber-Lang, M S; Ward, P A (2009). Cross-Talk between TLR4 and FcγReceptorIII (CD16) pathways. PLoS Pathogens, 5(6):e1000464.

Tester, S; Juillerat, V; Doherr, M G; Haase, B; Polak, M; Ehrensperger, F; Leeb, T; Zurbriggen, A; Seuberlich, T (2009). Biochemical typing of pathological prion protein in aging cattle with BSE. Virology Journal, 6:64.

Sebastian, S; Grütter, C; de Castillia, C S; Pertel, T; Olivari, S; Grütter, M G; Luban, J (2009). An invariant surface patch on the TRIM5alpha PRYSPRY domain is required for retroviral restriction but dispensable for capsid binding. Journal of Virology, 83(7):3365-3373.

Magnus, C; Rusert, P; Bonhoeffer, S; Trkola, A; Regoes, R R (2009). Estimating the stoichiometry of HIV entry. Journal of Virology, 83(3):1523-1531.

Schlagenhauf, Patricia; Petersen, Eskild (2009). Antimalaria drug resistance: the mono–combi–counterfeit triangle. Expert Review of Anti-infective Therapy, 7(9):1039-1042.

Hessell, A J; Rakasz, E G; Poignard, P; Hangartner, L; Landucci, G; Forthal, D N; Koff, W C; Watkins, D I; Burton, D R (2009). Broadly neutralizing human anti-HIV antibody 2G12 is effective in protection against mucosal SHIV challenge even at low serum neutralizing titers. PLoS Pathogens, 5(5):e1000433.

Alazard-Dany, N; Nicolas, A; Ploquin, A; Strasser, R; Greco, A; Epstein, A L; Fraefel, C; Salvetti, A (2009). Definition of herpes simplex virus type 1 helper activities for adeno-associated virus early replication events. PLoS Pathogens, 5(3):e1000340.

Wild, P; Senn, C; Manera, C L; Sutter, E; Schraner, E M; Tobler, K; Ackermann, M; Ziegler, U; Lucas, M S; Kaech, A (2009). Exploring the nuclear envelope of herpes simplex virus 1-infected cells by high-resolution microscopy. Journal of Virology, 83(1):408-419.

Qi, W; Käser, M; Röltgen, K; Yeboah-Manu, D; Pluschke, G (2009). Genomic diversity and evolution of Mycobacterium ulcerans revealed by next-generation sequencing. PLoS Pathogens, 5(9):e1000580.

Khanna, N; Wolbers, M; Mueller, N J; Garzoni, C; Du Pasquier, R A; Fux, C A; Vernazza, P; Bernasconi, E; Viscidi, R; Battegay, M; Hirsch, H H (2009). JC virus-specific immune responses in human immunodeficiency virus type 1 patients with progressive multifocal leukoencephalopathy. Journal of Virology, 83(9):4404-4411.

Yukl, S; Pillai, S; Li, P; Chang, K; Pasutti, W; Ahlgren, C; Havlir, D; Strain, M; Günthard, H; Richman, D; Rice, A P; Daar, Eric; Little, S; Wong, J K (2009). Latently-infected CD4+ T cells are enriched for HIV-1 Tat variants with impaired transactivation activity. Virology, 387(1):98-108.

Prasad, L; Spicher, V M; Negro, F; Rickenbach, M; Zwahlen, M (2009). Little evidence that hepatitis C virus leads to a higher risk of mortality in the absence of cirrhosis and excess alcohol intake: the Swiss Hepatitis C Cohort Study. Journal of Viral Hepatitis, 16(9):644-649.

Van Damme, P; von Sonnenburg, F; Hatz, C; Hoet, B; Lefevre, I; Leyssen, M (2009). Long-term immunogenicity of preservative-free hepatitis B vaccine formulations in adults. Journal of Medical Virology, 81(10):1710-5.

Gannagé, M; Dormann, D; Albrecht, R; Dengjel, J; Torossi, T; Rämer, P C; Lee, M; Strowig, T; Arrey, F; Conenello, G; Pypaert, M; Andersen, J; García-Sastre, A; Münz, C (2009). Matrix protein 2 of influenza A virus blocks autophagosome fusion with lysosomes. Cell Host & Microbe, 6(4):367-380.

2008

Hofer, U; Baenziger, S; Heikenwalder, M; Schlaepfer, E; Gehre, N; Regenass, S; Brunner, T; Speck, R F (2008). RAG2-/- gamma(c)-/- mice transplanted with CD34+ cells from human cord blood show low levels of intestinal engraftment and are resistant to rectal transmission of human immunodeficiency virus. Journal of Virology, 82(24):12145-12153.

Fischer, M; Joos, B; Niederost, B; Kaiser, P; Hafner, R; von Wyl, V; Ackermann, M; Weber, R; Gunthard, H F (2008). Biphasic decay kinetics suggest progressive slowing in turnover of latently HIV-1 infected cells during antiretroviral therapy. Retrovirology, 5:107.

Fejer, G; Drechsel, L; Liese, J; Schleicher, U; Ruzsics, Z; Imelli, N; Greber, U F; Keck, S; Hildenbrand, B; Krug, A; Bogdan, C; Freudenberg, M A (2008). Key role of splenic myeloid DCs in the IFN-alphabeta response to adenoviruses in vivo. PLoS Pathogens, 4(11):e1000208.

Schmid, H; Hächler, H; Stephan, R; Baumgartner, A; Boubaker, K (2008). Outbreak of Salmonella enterica serovar Typhimurium in Switzerland, May – June 2008, implications for production and control of meat preparations. Eurosurveillance, 13(44):1-4.

Nicoll, A; Ciancio, B C; Tsolova, S; Blank, P R; Yilmaz, C (2008). The scientific basis for offering seasonal influenza immunisation to risk groups in Europe. Eurosurveillance, 13(43):1-8.

Balenghien, T; Vazeille, M; Grandadam, M; Schaffner, Francis; Zeller, H; Reiter, P; Sabatier, P; Fouque, F; Bicout, D J (2008). Vector competence of some French Culex and Aedes mosquitoes for west nile virus. Vector Borne and Zoonotic Diseases, 8(5):589-595.

Pozniak, A; Opravil, M; Beatty, G; Hill, A; de Béthune, M P; Lefebvre, E (2008). Effect of baseline viral susceptibility on response to darunavir/ritonavir versus control protease inhibitors in treatment-experienced HIV type 1-infected patients: POWER 1 and 2. AIDS Research and Human Retroviruses, 24(10):1275-1280.

De Oliveira, A P; Glauser, D L; Laimbacher, A S; Strasser, R; Schraner, E M; Wild, P; Ziegler, U; Breakefield, X O; Ackermann, M; Fraefel, C (2008). Live visualization of herpes simplex virus type 1 compartment dynamics. Journal of Virology, 82(10):4974-4990.

von Poser-Klein, C; Flechsig, E; Hoffmann, T; Schwarz, P; Harms, H; Bujdoso, R; Aguzzi, A; Klein, M A (2008). Alteration of B-cell subsets enhances neuroinvasion in mouse scrapie infection. Journal of Virology, 82(7):3791-3795.

Master, S S; Rampini, S K; Davis, A S; Keller, C; Ehlers, S; Springer, B; Timmins, G S; Sander, P; Deretic, V (2008). Mycobacterium tuberculosis prevents inflammasome activation. Cell Host & Microbe, 3(4):224-232.

Meerbach, A; Wutzler, P; Haefer, R; Zintl, F; Gruhn, B (2008). Monitoring of Epstein-Barr virus load after hematopoietic stem cell transplantation for early intervention in post-transplant lymphoproliferative disease. Journal of Medical Virology, 80(3):441-454.

Tekes, G; Hofmann-Lehmann, R; Stallkamp, I; Thiel, V; Thiel, H J (2008). Genome organization and reverse genetic analysis of a type I feline coronavirus. Journal of Virology, 82(4):1851-1859.

Trkola, A; Kuster, H; Rusert, P; von Wyl, V; Leemann, C; Weber, R; Stiegler, G; Katinger, H; Joos, B; Günthard, H F (2008). In vivo efficacy of human immunodeficiency virus neutralizing antibodies: estimates for protective titers. Journal of Virology, 82(3):1591-1599.

Frost, D W; Trkola, A; Günthard, H F; Richman, D D (2008). Antibody responses in primary HIV-1 infection. Current Opinion in HIV and AIDS, 3(1):45-51.

Jayawardane, G; Russel, G C; Thomson, J; Deane, D; Cox, H; Gatherer, D; Ackermann, M; Haig, D M; Stewart, J P (2008). A captured viral interleukin 10 gene with cellular exon structure. Journal of General Virology, 89(10):2447-2455.

Baur, K; Rauer, M; Richter, K; Pagenstecher, A; Götz, J; Hausmann, J; Staeheli, P (2008). Antiviral CD8 T cells recognize borna disease virus antigen transgenically expressed in either neurons or astrocytes. Journal of Virology, 82(6):3099-3108.

Tandon, R; Cattori, V; Pepin, A C; Riond, B; Meli, M L; McDonald, M; Doherr, M G; Lutz, H; Hofmann-Lehmann, R (2008). Association between endogenous feline leukemia virus loads and exogenous feline leukemia virus infection in domestic cats. Virus Research, 135(1):136-143.

Schweizer, A; Rusert, P; Berlinger, L; Ruprecht, C R; Mannhart, A; Corthésy, S; Turville, S G; Aravantinou, M; Fischer, M; Robbiani, M; Amstutz, P; Trkola, A (2008). CD4-specific designed ankyrin repeat proteins are novel potent HIV entry inhibitors with unique characteristics. PLoS Pathogens, 4(7):e1000109.

Frank, C; Kapfhammer, S; Werber, D; Stark, K; Held, L (2008). Cattle density and Shiga toxin-producing Escherichia coli infection in Germany: Increased risk for most but not all serogroups. Vector-Borne and Zoonotic Diseases, 8(5):635-644.

Knoepfel, S A; Salisch, N C; Huelsmann, P M; Rauch, P; Walter, H; Metzner, K J (2008). Comparison of G-to-A mutation frequencies induced by APOBEC3 proteins in H9 cells and peripheral blood mononuclear cells in the context of impaired processivities of drug-resistant human immunodeficiency virus type 1 reverse transcriptase variants. Journal of Virology, 82(13):6536-6545.

Dorner, M; Zucol, F; Berger, C; Byland, R; Melroe, G T; Bernasconi, M; Speck, R F; Nadal, D (2008). Distinct ex vivo susceptibility of B-cell subsets to epstein-barr virus infection according to differentiation status and tissue origin. Journal of Virology, 82(9):4400-4412.

Rehr, M; Cahenzli, J; Haas, A; Price, D A; Gostick, E; Huber, M; Karrer, U; Oxenius, A (2008). Emergence of polyfunctional CD8+ T cells after prolonged suppression of human immunodeficiency virus replication by antiretroviral therapy. Journal of Virology, 82(7):3391-3404.

Davis, X M; MacDonald, S; Borwein, S; Freedman, D O; Kozarsky, P E; von Sonnenburg, F; Keystone, J S; Lim, P L; Marano, N (2008). Health risks in travelers to China: the GeoSentinel experience and implications for the 2008 Beijing Olympics. American Journal of Tropical Medicine and Hygiene, 79(1):4-8.

Rechsteiner, M P; Berger, C; Zauner, L; Sigrist, J A; Weber, M; Longnecker, R; Bernasconi, M; Nadal, D (2008). Latent membrane protein 2B regulates susceptibility to induction of lytic Epstein-Barr virus infection. Journal of Virology, 82(4):1739-1747.

Huber, M; von Wyl, V; Ammann, C G; Kuster, H; Stiegler, G; Katinger, H; Weber, R; Fischer, M; Stoiber, H; Günthard, H F; Trkola, A (2008). Potent human immunodeficiency virus-neutralizing and complement lysis activities of antibodies are not obligatorily linked. Journal of Virology, 82(8):3834-3842.

Moutailler, S; Krida, G; Schaffner, Francis; Vazeille, M; Failloux, A B (2008). Potential vectors of rift valley Fever virus in the Mediterranean region. Vector Borne and Zoonotic Diseases, 8(6):749-753.

Julius, C; Heikenwalder, M; Schwarz, P; Marcel, A; Karin, M; Prinz, M; Pasparakis, M; Aguzzi, A (2008). Prion propagation in mice lacking central nervous system NF-kappaB signalling. Journal of General Virology, 89(6):1545-1550.

Rechsteiner, M P; Bernasconi, M; Berger, C; Nadal, D (2008). Role of latent membrane protein 2 isoforms in Epstein-Barr virus latency. Trends in Microbiology, 16(11):520-527.

Blank, P R; Freiburghaus, A U; Schwenkglenks, M; Szucs, T D (2008). Trends in influenza vaccination coverage rates in the United Kingdom over six seasons from 2001-2 to 2006-7. Euro Surveillance, 13(43):1-7.

2007

Fleischli, C; Sirena, D; Lesage, G; Havenga, M J E; Cattaneo, R; Greber, U F; Hemmi, S (2007). Species B adenovirus serotypes 3, 7, 11 and 35 share similar binding sites on the membrane cofactor protein CD46 receptor. Journal of General Virology, 88(11):2925-2934.

Song, J W; Gu, S H; Bennett, S N; Arai, S; Puorger, M; Hilbe, M; Yanagihara, R (2007). Seewis virus, a genetically distinct hantavirus in the Eurasian common shrew (Sorex araneus). Virology Journal, 4:11.

Greber, U F; Gastaldelli, M (2007). Junctional gating: the achilles' heel of epithelial cells in pathogen infection. Cell Host & Microbe, 2(3):143-146.

Pepin, A C; Tandon, R; Cattori, V; Niederer, E; Riond, Barbara; Willi, Barbara; Lutz, H; Hofmann-Lehmann, R (2007). Cellular segregation of feline leukemia provirus and viral RNA in leukocyte subsets of long-term experimentally infected cats. Virus Research, 127(1):9-16.

Taus, N S; Herndon, D R; Traul, D L; Stewart, J P; Ackermann, M; Li, H; Knowles, D P; Lewis, G S; Brayton, K A (2007). Comparison of ovine herpesvirus 2 genomes isolated from domestic sheep (Ovis aries) and a clinically affected cow (Bos bovis). Journal of General Virology, 88:40-45.

Hart, J; Ackermann, M; Jayawardane, G; Russell, G; Haig, D M; Reid, H; Stewart, J P (2007). Complete sequence and analysis of the ovine herpesvirus 2 genome. Journal of General Virology, 88(Pt 1):28-39.

Bergthaler, Andreas; Merkler, Doron; Horvath, Edit; Bestmann, Lukas; Pinschewer, Daniel D (2007). Contributions of the lymphocytic choriomeningitis virus glycoprotein and polymerase to strain-specific differences in murine liver pathogenicity. Journal of General Virology, 88(Pt 2):592-603.

Shanks, G D; Magill, A J; Freedman, D O; Keystone, J S; Bradley, D J; Steffen, R (2007). Drug-free holidays: pre-travel versus during travel malaria chemoprophylaxis. The American Journal of Tropical Medicine and Hygiene, 77(1):1-2.

Marruchella, G; Ligios, C; Albanese, V; Cancedda, M G; Madau, L; Lalatta-Costerbosa, G; Mazzoni, M; Clavenzani, P; Chiocchetti, R; Sarli, G; De Grossi, L; Agrimi, U; Aguzzi, A; Di Guardo, G (2007). Enteroglial and neuronal involvement without apparent neuron loss in ileal enteric nervous system plexuses from scrapie-affected sheep. Journal of General Virology, 88(Pt 10):2899-2904.

Steed, A; Buch, T; Waisman, A; Virgin, H W (2007). Gamma interferon blocks gammaherpesvirus reactivation from latency in a cell type-specific manner. Journal of Virology, 81(11):6134-6140.

Rechner, C; Kühlewein, C; Müller, A; Schild, H; Rudel, T (2007). Host glycoprotein Gp96 and scavenger receptor SREC interact with PorB of disseminating Neisseria gonorrhoeae in an epithelial invasion pathway. Cell Host & Microbe, 2(6):393-403.

Glauser, D L; Strasser, R; Laimbacher, A S; Saydam, O; Clément, N; Linden, R M; Ackermann, M; Fraefel, C (2007). Live covisualisation of competing adeno-associated virus and herpes simplex virus type 1 DNA replication. Molecular mechanisms of interaction. Journal of Virology, 81(9):4732-4743.

Trojan, A; Rajeswaran, R; Montemurro, M; Mütsch, Margot; Steffen, Robert (2007). Real time PCR for the assessment of CD8+ T cellular immune response after prophylactic vaccinia vaccination. Journal of Clinical Virology, 40(1):80-83.

Ferrantelli, F; Buckley, K A; Rasmussen, R A; Chalmers, A; Wang, T; Li, P L; Williams, A L; Hofmann-Lehmann, R; Montefiori, D C; Cavacini, L A; Katinger, H; Stiegler, G; Anderson, D C; McClure, H M; Ruprecht, R M (2007). Time dependence of protective post-exposure prophylaxis with human monoclonal antibodies against pathogenic SHIV challenge in newborn macaques. Virology, 358(1):69-78.

2006

Sigurdson, C J; Manco, G J; Schwarz, P; Liberski, P; Hoover, E A; Hornemann, S; Polymenidou, M; Miller, M W; Glatzel, M; Aguzzi, A (2006). Strain fidelity of chronic wasting disease upon murine adaptation. Journal of Virology, 80(24):12303-12311.

Tehe, A; Maurice, C; Hanson, D L; Borget, M Y; Abiola, N; Maran, M; Yavo, D; Tomasik, Z; Böni, J; Schüpbach, J; Nkengasong, J N (2006). Quantification of HIV-1 p24 by a highly improved ELISA: An alternative to HIV-1 RNA based treatment monitoring in patients from Abidjan, Côte d'Ivoire. Journal of Clinical Virology, 37(3):199-205.

Helbling, Beat; Jochum, Wolfram; Stamenic, Ivan; Knöpfli, Marina; Cerny, Andreas; Borovicka, J; Gonvers, Jean-Jacques; Wilhelmi, Martin; Dinges, Sabine; Müllhaupt, Beat; Esteban, Alicia; Meyer-Wyss, Beat; Renner, Eberhard L (2006). HCV-related advanced fibrosis/cirrhosis: randomized controlled trial of pegylated interferon alpha-2a and ribavirin. Journal of Viral Hepatitis, 13(11):762-769.

Schüpbach, J; Tomasik, Z; Knuchel, M C; Opravil, M; Günthard, H F; Nadal, D; Böni, J (2006). Optimized virus disruption improves detection of HIV-1 p24 in particles and uncovers a p24 reactivity in patients with undetectable HIV-1 RNA under long-term HAART. Journal of Medical Virology, 78(8):1003-1010.

Bernasconi, M; Berger, C; Sigrist, J A; Bonanomi, A; Sobek, J; Niggli, F K; Nadal, D (2006). Quantitative profiling of housekeeping and Epstein-Barr virus gene transcription in Burkitt lymphoma cell lines using an oligonucleotide microarray. Virology Journal, 3:43.

Böni, J; Schüpbach, J; Rickenbach, M (2006). Rabbit retrotransposon sequences undetectable in blood donors and lymphoma patients of the Swiss HIV Cohort Study. AIDS Research and Human Retroviruses, 22(6):499-500.

Knuchel, M C; Tomasik, Z; Speck, R F; Lüthy, R; Schüpbach, J (2006). Ultrasensitive quantitative HIV-1 p24 antigen assay adapted to dried plasma spots to improve treatment monitoring in low-resource settings. Journal of Clinical Virology, 36(1):64-67.

Taylor, D N; Bourgeois, A L; Ericsson, C D; Steffen, R; Jiang, Z D; Halpern, J; Haake, R; Dupont, H L (2006). A randomized, double-blind, multicenter study of rifaximin compared with placebo and with ciprofloxacin in the treatment of travelers' diarrhea. The American Journal of Tropical Medicine and Hygiene, 74(6):1060-1066.

Christen, Daniel; Steffen, Robert; Schlagenhauf, Patricia (2006). Deaths caused by malaria in Switzerland 1988-2002. American Journal of Tropical Medicine and Hygiene, 75(6):1188-1194.

Tobler, K; Favrot, C; Nespeca, G; Ackermann, M (2006). Detection of the prototype of a potential novel genus in the family Papillomaviridae in association with canine epidermodysplasia verruciformis. Journal of General Virology, 87(Pt 12):3551-3557.

Leeming, G; Meli, M L; Cripps, P; Vaughan-Thomas, A; Lutz, H; Gaskell, R; Kipar, A (2006). Tracheal organ cultures as a useful tool to study Felid herpesvirus 1 infection in respiratory epithelium. Journal of Virological Methods, 138(1-2):191-195.

2005

Sirena, D; Ruzsics, Z; Schaffner, Walter; Greber, U F; Hemmi, S (2005). The nucleotide sequence and a first generation gene transfer vector of species B human adenovirus serotype 3. Virology, 343(2):283-298.

Fleischli, C; Verhaagh, S; Havenga, M; Sirena, D; Schaffner, Walter; Cattaneo, R; Greber, U F; Hemmi, S (2005). The distal short consensus repeats 1 and 2 of the membrane cofactor protein CD46 and their distance from the cell membrane determine productive entry of species B adenovirus serotype 35. Journal of Virology, 79(15):10013-10022.

Joos, B; Trkola, A; Fischer, M; Kuster, H; Rusert, P; Leemann, C; Böni, J; Oxenius, A; Price, D A; Phillips, R E; Wong, J K; Hirschel, B; Weber, R; Günthard, H F (2005). Low human immunodeficiency virus envelope diversity correlates with low in vitro replication capacity and predicts spontaneous control of plasma viremia after treatment interruptions. Journal of Virology, 79(14):9026-9037.

Donofrio, G; Heppner, F L; Polymenidou, M; Musahl, C; Aguzzi, A (2005). Paracrine inhibition of prion propagation by anti-PrP single-chain Fv miniantibodies. Journal of Virology, 79(13):8330-8338.

Glatzel, M; Mohajeri, M H; Poirier, R; Nitsch, R M; Schwarz, Petra; Lu, B; Aguzzi, A (2005). No influence of amyloid-beta-degrading neprilysin activity on prion pathogenesis. Journal of General Virology, 8(6):1861-1867.

Nikles, D; Bach, P; Boller, K; Merten, C A; Montrasio, F; Heppner, F L; Aguzzi, A; Cichutek, K; Kalinke, U; Buchholz, C J (2005). Circumventing tolerance to the prion protein (PrP): vaccination with PrP-displaying retrovirus particles induces humoral immune responses against the native form of cellular PrP. Journal of Virology, 79(7):4033-4042.

Meier, O; Gastaldelli, M; Boucke, K; Hemmi, S; Greber, U F (2005). Early steps of clathrin-mediated endocytosis involved in phagosomal escape of Fcgamma receptor-targeted adenovirus. Journal of Virology, 79(4):2604-2613.

Chenine, Agnès-Laurence; Ferrantelli, Flavia; Hofmann-Lehmann, Regina; Vangel, Mark G; McClure, Harold M; Ruprecht, Ruth M (2005). Older rhesus macaque infants are more susceptible to oral infection with simian-human immunodeficiency virus 89.6P than neonates. Journal of Virology, 79(2):1333-1336.

Tandon, R; Cattori, V; Gomes-Keller, M A; Meli, M L; Golder, M C; Lutz, H; Hofmann-Lehmann, R (2005). Quantitation of feline leukaemia virus viral and proviral loads by TaqMan real-time polymerase chain reaction. Journal of Virological Methods, 130(1-2):124-132.

2004

Shah, C A; Huder, J B; Böni, J; Schönmann, M; Mühlherr, J; Lutz, H; Schüpbach, J (2004). Direct evidence for natural transmission of small-ruminant lentiviruses of subtype A4 from goats to sheep and vice versa. Journal of Virology, 78(14):7518-7522.

Sirena, D; Lilienfeld, B; Eisenhut, M; Kälin, S; Boucke, K; Beerli, R R; Vogt, Lorenz; Ruedl, C; Bachmann, M F; Greber, U F; Hemmi, S (2004). The human membrane cofactor CD46 is a receptor for species B adenovirus serotype 3. Journal of Virology, 78(9):4454-4462.

Imelli, N; Meier, O; Boucke, K; Hemmi, S; Greber, U F (2004). Cholesterol is required for endocytosis and endosomal escape of adenovirus type 2. Journal of Virology, 78(6):3089-3098.

Shah, C A; Böni, J; Huder, J B; Vogt, H R; Mühlherr, J; Zanoni, R; Miserez, R; Lutz, H; Schüpbach, J (2004). Phylogenetic analysis and reclassification of caprine and ovine lentiviruses based on 104 new isolates: evidence for regular sheep-to-goat transmission and worldwide propagation through livestock trade. Virology, 319(1):12-26.

Böni, J; Bisset, L R; Burckhardt, J J; Joller-Jemelka, H I; Bürgisser, P; Perrin, L; Gorgievski, M; Erb, P; Fierz, W; Piffaretti, J C; Schüpbach, J (2004). Prevalence of human T-cell leukemia virus types I and II in Switzerland. Journal of Medical Virology, 72(2):328-337.

Glatzel, M; Giger, Olivier; Seeger, H; Aguzzi, A (2004). Variant Creutzfeldt-jakob disease: between lymphoid organs and brain. Trends in Microbiology, 12(2):51-53.

Böni, J; Shah, C A; Flepp, M; Lüthy, R; Schüpbach, J (2004). Detection of low copy numbers of HIV-1 proviral DNA in patient PBMCs by a high-input, sequence-capture PCR (Mega-PCR). Journal of Medical Virology, 72(1):1-9.

Rauer, M; Götz, J; Schuppli, D; Staeheli, P; Hausmann, J (2004). Transgenic mice expressing the nucleoprotein of Borna disease virus in either neurons or astrocytes: decreased susceptibility to homotypic infection and disease. Journal of Virology, 78(7):3621-3632.

2003

Ribas, S G; Ondoa, P; Schüpbach, J; van der Groen, G; Fransen, K (2003). Performance of a quantitative human immunodeficiency virus type 1 p24 antigen assay on various HIV-1 subtypes for the follow-up of human immunodeficiency type 1 seropositive individuals. Journal of Virological Methods, 113(1):29-34.

Buckley, Kathleen A; Li, Pei-Lin; Khimani, Anis H; Hofmann-Lehmann, Regina; Liska, Vladimir; Anderson, Daniel C; McClure, Harold M; Ruprecht, Ruth M (2003). Convergent evolution of SIV env after independent inoculation of rhesus macaques with infectious proviral DNA. Virology, 312(2):470-480.

Shah, C A; Böni, J; Bisset, L R; Seebach, J D; Schüpbach, J (2003). Ultra-sensitive and specific detection of porcine endogenous retrovirus (PERV) using a sequence-capture real-time PCR approach. Journal of Virological Methods, 109(2):209-216.

2002

Mabit, H; Nakano, M Y; Prank, U; Saam, B; Döhner, K; Sodeik, B; Greber, U F (2002). Intact microtubules support adenovirus and herpes simplex virus infections. Journal of Virology, 76(19):9962-9971.

Huder, J B; Böni, J; Hatt, Jean-Michel; Soldati, G; Lutz, Hans; Schüpbach, Jörg (2002). Identification and characterization of two closely related unclassifiable endogenous retroviruses in pythons (Python molurus and Python curtus). Journal of Virology, 76(15):7607-7615.

Minder, D; Böni, J; Schüpbach, J; Gehring, H (2002). Immunophilins and HIV-1 infection. Archives of Virology, 147(8):1531-1542.

Hofmann-Lehmann, Regina; Vlasak, Josef; Chenine, Agnès-Laurence; Li, Pei-Lin; Baba, Timothy W; Montefiori, David C; McClure, Harold M; Anderson, Daniel C; Ruprecht, Ruth M (2002). Molecular evolution of human immunodeficiency virus env in humans and monkeys: similar patterns occur during natural disease progression or rapid virus passage. Journal of Virology, 76(10):5278-5284.

Thackray, A M; Klein, M A; Aguzzi, A; Bujdoso, R (2002). Chronic subclinical prion disease induced by low-dose inoculum. Journal of Virology, 76(5):2510-2517.

Bisset, Leslie R; Lutz, Hans; Böni, Jürg; Hofmann-Lehmann, Regina; Lüthy, Ruedi; Schüpbach, Jörg (2002). Combined effect of zidovudine (ZDV), lamivudine (3TC) and abacavir (ABC) antiretroviral therapy in suppressing in vitro FIV replication. Antiviral Research, 53(1):35-45.

Glatzel, M; Brandner, S; Klein, M A; Horstmann, S K; Aguzzi, A (2002). Prions--role of the peripheral nervous system. Virus Research, 82(1-2):53.

Hofmann-Lehmann, Regina; Williams, Alison L; Swenerton, Ryan K; Li, Pei-Lin; Rasmussen, Robert A; Chenine, Agnès-Laurence; McClure, Harold M; Ruprecht, Ruth M (2002). Quantitation of Simian Cytokine andβ-Chemokine mRNAs, using real-time reverse transcriptase-polymerase chain reaction: variations in expression during chronic primate lentivirus infection. AIDS Research and Human Retroviruses, 18(9):627-639.

2001

Pion, Marjorie; Liska, Vladimir; Chenine, Agnès-Laurence; Hofmann-Lehmann, Regina; Vlasak, Josef; Gondois-Rey, Françoise; Ruprecht, Ruth M; Hirsch, Ivan (2001). Extensively deleted simian immunodeficiency virus (SIV) DNA in macaques inoculated with supercoiled plasmid DNA encoding full-length SIVmac239. Virology, 289(1):103-113.

Schüpbach, J; Böni, J; Flepp, M; Tomasik, Z; Joller, H; Opravil, M (2001). Antiretroviral treatment monitoring with an improved HIV-1 p24 antigen test: an inexpensive alternative to tests for viral RNA. Journal of Medical Virology, 65(2):225-232.

Kaeser, P S; Klein, M A; Schwarz, P; Aguzzi, A (2001). Efficient lymphoreticular prion propagation requires PrP(c) in stromal and hematopoietic cells. Journal of Virology, 75(15):7097-7106.

Hofmann-Lehmann, Regina; Vlasak, J; Rasmussen, R A; Smith, B A; Baba, T W; Liska, V; Ferrantelli, F; Montefiori, D C; McClure, H M; Anderson, D C; Bernacky, B J; Rizvi, T A; Schmidt, R; Hill, L R; Keeling, M E; Katinger, H; Stiegler, G; Cavacini, L A; Posner, M R; Chou, T C; Andersen, J; Ruprecht, R M (2001). Postnatal passive immunization of neonatal macaques with a triple combination of human monoclonal antibodies against oral simian-human immunodeficiency virus challenge. Journal of Virology, 75(16):7470-7480.

Hofmann-Lehmann, Regina; Huder, Jon B; Gruber, Sabine; Boretti, Felicitas S; Sigrist, Brigitte; Lutz, Hans (2001). Feline leukaemia provirus load during the course of experimental infection and in naturally infected cats. Journal of General Virology, 82(Pt 7):1589-1596.

Afanasieva, T A; Pekarik, V; Grazia D'Angelo, M; Klein, M A; Voigtländer, T; Stocking, C; Aguzzi, A (2001). Insertional mutagenesis of preneoplastic astrocytes by Moloney murine leukemia virus. Journal of NeuroVirology, 7(2):169-181.

Hobi, R; Hübscher, U; Neftel, K; Alteri, E; Poncioni, B; Walker, M R; Woods-Cook, K; Schneider, P; Lazdins, J K (2001). Anti-HIV-1 activity in vitro of ceftazidime degradation products. Antiviral Chemistry & Chemotherapy, 12(2):109-118.

Bisset, L R; Bosbach, S; Tomasik, Z; Lutz, H; Schüpbach, J; Böni, J (2001). Quantification of in vitro retroviral replication using a one-tube real-time RT-PCR system incorporating direct RNA preparation. Journal of Virological Methods, 91(2):149-155.

Ebbinghaus, C; Al-Jaibaji, A; Operschall, E; Schöffel, A; Peter, I; Greber, U F; Hemmi, S (2001). Functional and selective targeting of adenovirus to high-affinity Fcgamma receptor I-positive cells by using a bispecific hybrid adapter. Journal of Virology, 75(1):480-489.

Roscic-Mrkic, B; Schwendener, R; Odermatt, B; Zuniga, A; Pavlovic, J; Billeter, M A; Cattaneo, R (2001). Roles of macrophages in measles virus infection of genetically modified mice. Journal of Virology, 75(7):3343-3351.

Aguzzi, A; Brandner, S; Fischer, M B; Furukawa, H; Glatzel, M; Hawkins, C; Heppner, F L; Montrasio, F; Navarro, B; Parizek, P; Pekarik, V; Prinz, M; Raeber, A J; Röckl, C; Klein, M A (2001). Spongiform encephalopathies: insights from transgenic models. Advances in Virus Research, 56:313-352.

2000

Glatzel, M; Aguzzi, A (2000). PrP(C) expression in the peripheral nervous system is a determinant of prion neuroinvasion. Journal of General Virology, 81(11):2813-2821.

Hofmann-Lehmann, Regina; Swenerton, Ryan K; Liska, Vladimir; Leutenegger, Christian M; Lutz, Hans; McClure, Harold M; Ruprecht, Ruth M (2000). Sensitive and robust one-tube real-time reverse transcriptase-polymerase chain reaction to quantify SIV RNA load: comparison of one- versus two-enzyme systems. AIDS Research and Human Retroviruses, 16(13):1247-1257.

Fischer, M; Günthard, H F; Opravil, M; Joos, B; Huber, W; Bisset, L R; Ott, P; Böni, J; Weber, R; Cone, R W (2000). Residual HIV-RNA levels persist for up to 2.5 years in peripheral blood mononuclear cells of patients on potent antiretroviral therapy. AIDS Research and Human Retroviruses, 16(12):1135-1140.

Nakano, M Y; Boucke, K; Suomalainen, M; Stidwill, R P; Greber, U F (2000). The first step of adenovirus type 2 disassembly occurs at the cell surface, independently of endocytosis and escape to the cytosol. Journal of Virology, 74(15):7085-7095.

Leutenegger, Christian M; Huder, Jon B; Mislin, Caroline N; Lahrtz, Fritz; Hofmann-Lehmann, Regina; Pedersen, Niels C; Lutz, Hans (2000). Molecular characterization of feline interleukin 16: chemotactic activity and effect on feline immunodeficiency virus infection and/or replication. AIDS Research and Human Retroviruses, 16(6):569-575.

Opravil, M; Cone, R W; Fischer, M; Vernazza, P L; Bassetti, S; Lorenzi, P; Bisset, L R; Ott, P; Huber, W; Knuchel, M C; Roos, Malgorzata; Lüthy, R; Weber, R (2000). Effects of early antiretroviral treatment on HIV-1 RNA in blood and lymphoid tissue: a randomized trial of double versus triple therapy. Swiss HIV cohort study. Journal of Acquired Immune Deficiency Syndromes, 23(1):17-25.

Ruprecht, Ruth M; Hofmann-Lehmann, Regina; Rasmussen, Robert A; Vlasak, Josef; Xu, W (2000). 1999: a time to re-evaluate AIDS vaccine strategies. Journal of human virology, 3(2):88-93.

1999

Frigg, R; Klein, M A; Hegyi, I; Zinkernagel, R M; Aguzzi, A (1999). Scrapie pathogenesis in subclinically infected B-cell-deficient mice. Journal of Virology, 73(11):9584-9588.

Böni, J; Pyra, H; Gebhardt, M; Perrin, L; Bürgisser, P; Matter, L; Fierz, W; Erb, P; Piffaretti, J C; Minder, E; Grob, P; Burckhardt, J J; Zwahlen, M; Schüpbach, J (1999). High frequency of non-B subtypes in newly diagnosed HIV-1 infections in Switzerland. JAIDS Journal of Acquired Immune Deficiency Syndromes, 22(2):174-179.

Hefti, H P; Frese, M; Landis, H; Di Paolo, C; Aguzzi, A; Haller, O; Pavlovic, J (1999). Human MxA protein protects mice lacking a functional alpha/beta interferon system against La crosse virus and other lethal viral infections. Journal of Virology, 73(8):6984-6991.

Grob, P; Schijns, V E; van den Broek, M F; Cox, S P; Ackermann, M; Suter, M (1999). Role of the individual interferon systems and specific immunity in mice in controlling systemic dissemination of attenuated pseudorabies virus infection. Journal of Virology, 73(6):4748-4754.

Liska, Vladimir; Khimani, Anis H; Hofmann-Lehmann, Regina; Ng Fink, Alice; Vlasak, Josef; Ruprecht, Ruth M (1999). Viremia and AIDS in rhesus macaques after intramuscular inoculation of plasmid DNA encoding full-length SIVmac239. AIDS Research and Human Retroviruses, 15(5):445-450.

Leutenegger, Christian M; Klein, D; Hofmann-Lehmann, Regina; Mislin, Caroline N; Hummel, U; Böni, J; Boretti, Felicitas S; Guenzburg, W H; Lutz, Hans (1999). Rapid feline immunodeficiency virus provirus quantitation by polymerase chain reaction using the TaqMan fluorogenic real-time detection system. Journal of Virological Methods, 78(40575):105-116.

1998

Holznagel, E; Hofmann-Lehmann, R; Leutenegger, C M; Allenspach, K; Huettner, S; Forster, U; Niederer, E; Joller, H; Willett, B J; Hummel, U; Rossi, G L; Schüpbach, J; Lutz, H (1998). The role of in vitro-induced lymphocyte apoptosis in feline immunodeficiency virus infection: correlation with different markers of disease progression. Journal of Virology, 72(11):9025-9033.

Greber, U F (1998). Virus assembly and disassembly: the adenovirus cysteine protease as a trigger factor. Reviews in Medical Virology, 8(4):213-222.

Mrkic, B; Pavlovic, J; Rülicke, T; Volpe, P; Buchholz, C J; Hourcade, D; Atkinson, J P; Aguzzi, A; Cattaneo, R (1998). Measles virus spread and pathogenesis in genetically modified mice. Journal of Virology, 72(9):7420-7427.

Schüpbach, J; Böni, J (1998). Sensitivity of heat-denatured p24 antigen in the diagnosis of pediatric HIV infection. Journal of Acquired Immune Deficiency Syndromes, 18(4):399-400.

Leutenegger, C M; Hofmann-Lehmann, Regina; Holznagel, Edgar; Cuisinier, A M; Wolfensberger, C; Duquesne, V; Cronier, J; Allenspach, Karin; Aubert, Andre; Ossent, Pete; Lutz, Hans (1998). Partial protection by vaccination with recombinant feline immunodeficiency virus surface glycoproteins. AIDS Research and Human Retroviruses, 14(3):275-283.

Peghini, P A; Zahner, R; Kuster, H; Schott, H; Schwendener, R (1998). In vitro anti-human immunodeficiency virus and anti-hepatitis B virus activities and pharmacokinetic properties of heterodinucleoside phosphates containing AZT or ddC. Antiviral Chemistry & Chemotherapy, 9(2):117-126.

Rovigatti, U; Afanasieva, T A; Brandner, S; Hainfellner, J A; Kiess, M; Maddalena, A; Malin, G; Rülicke, T; Steinbach, J; Weissenberger, J; Aguzzi, A (1998). Transgenic mice as research tools in neurocarcinogenesis. Journal of Neurovirology, 4(2):159-174.

1997

Bieniasz, P D; Erlwein, O; Aguzzi, A; Rethwilm, A; McClure, M O (1997). Gene transfer using replication-defective human foamy virus vectors. Virology, 235(1):65-72.

Schmidt, M; Niewiesk, S; Heeney, J; Aguzzi, A; Rethwilm, A (1997). Mouse model to study the replication of primate foamy viruses. Journal of General Virology, 78(8):1929-1933.

Weissmahr, R N; Schüpbach, J; Böni, J (1997). Reverse transcriptase activity in chicken embryo fibroblast culture supernatants is associated with particles containing endogenous avian retrovirus EAV-0 RNA. Journal of Virology, 71(4):3005-3012.

Schlagenhauf, Patricia; Lobel, Hans; Steffen, Robert; Johnson, Richard; Popp, Kathryn; Tschopp, Alois; Letz, Richard; Crevoisier, Charles (1997). Tolerance of mefloquine by SwissAir trainee pilots. American Journal of Tropical Medicine and Hygiene, 56(2):235-240.

Aguzzi, A; Raeber, A; Blättler, T; Flechsig, E; Klein, M; Weissmann, C; Brandner, S (1997). Neurotoxicity and neuroinvasiveness of prions. Journal of NeuroVirology, 3(S1):S23-S24.

Weber, T; Aguzzi, A (1997). The spectrum of transmissible spongiform encephalopathies. Intervirology, 40(2-3):198-212.

1996

Jendis, J; Strack, B; Volkmann, S; Böni, J; Mölling, K (1996). Inhibition of replication of fresh HIV type 1 patient isolates by a polypurine tract-specific self-complementary oligodeoxynucleotide. AIDS Research and Human Retroviruses, 12(12):1161-1168.

Schüpbach, J; Pyra, H; Jendis, J; Tomasik, Z; Böni, J (1996). Isolation of an in vitro transmissible agent with reverse transcriptase activity from a blood donor with a borderline-positive HIV-1 serology for more than five years. Clinical and Diagnostic Virology, 5(2-3):197-203.

Schüpbach, J (1996). Licencing of diagnostic HIV kits-to keep a sensible standpoint in an area of permanent revolution. Clinical and Diagnostic Virology, 5(2-3):137-146.

Böni, J; Pyra, H; Schüpbach, J (1996). Sensitive detection and quantification of particle-associated reverse transcriptase in plasma of HIV-1-infected individuals by the product-enhanced reverse transcriptase (PERT) assay. Journal of Medical Virology, 49(1):23-28.

Lutz, Hans; Hofmann-Lehmann, Regina; Leutenegger, C; Allenspach, K; Cuisinier, A M; Cronier, J; Duquesne, V; Aubert, Andre (1996). Vaccination of cats with recombinant envelope glycoprotein of feline immunodeficiency virus: decreased viral load after challenge infection. AIDS Research and Human Retroviruses, 12(5):431-433.

Tschopp, R R; Brandner, S; Marino, S; Bothe, K; Horak, I; Rethwilm, A; Aguzzi, A (1996). Analysis of the determinants of neurotropism and neurotoxicity of HFV in transgenic mice. Virology, 216(2):338-346.

Böni, J; Stalder, J; Reigel, F; Schüpbach, J (1996). Detection of reverse transcriptase activity in live attenuated virus vaccines. Clinical and Diagnostic Virology, 5(1):43-53.

Aguzzi, A; Weissmann, C (1996). Sleepless in Bologna: transmission of fatal familial insomnia. Trends in Microbiology, 4(4):129-132.

1995

Amacker, M; Hottiger, M O; Hübscher, U (1995). Feline immunodeficiency virus reverse transcriptase: expression, functional characterization, and reconstitution of the 66- and 51-kilodalton subunits. Journal of Virology, 69(10):6273-6279.

van den Broek, M F; Müller, U; Huang, S; Aguet, M; Zinkernagel, R M (1995). Antiviral defense in mice lacking both alpha/beta and gamma interferon receptors. Journal of Virology, 69(8):4792-4796.

Moskophidis, D; Battegay, M; van den Broek, M; Laine, E; Hoffmann-Rohrer, U; Zinkernagel, R M (1995). Role of virus and host variables in virus persistence or immunopathological disease caused by a non-cytolytic virus. Journal of General Virology, 76/ 2:381-391.

Sure, U; Bertalanffy, H; Isenmann, S; Brandner, S; Berghorn, W J; Seeger, W; Aguzzi, A (1995). Secondary manifestation of medulloblastoma: metastases and local recurrences in 66 patients. Acta Neurochirurgica, 136(3-4):117-126.

1994

Greber, U F; Singh, I; Helenius, A (1994). Mechanisms of virus uncoating. Trends in Microbiology, 2(2):52-56.

Schwendener, R; Gowland, P; Horber, D H; Zahner, R; Schertler, A; Schott, H (1994). New lipophilic alkyl/acyl dinucleoside phosphates as derivatives of 3'-azido-3'-deoxythymidine: inhibition of HIV-1 replication in vitro and antiviral activity against Rauscher leukemia virus infected mice with delayed treatment regimens. Antiviral Research, 24(1):79-93.

1993

Schüpbach, J; Böni, J (1993). Quantitative and sensitive detection of immune-complexed and free HIV antigen after boiling of serum. Journal of Virological Methods, 43(2):247-256.

This list was generated on Sun May 31 01:33:12 2020 CEST.