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Lin, Jianfang; Ren, Yupeng; Abgrall, Rémi; Qiu, Jianxian (2022). High order residual distribution conservative finite difference HWENO scheme for steady state problems. Journal of Computational Physics, 457:111045.

Abgrall, Rémi; Öffner, Philipp; Ranocha, Hendrik (2022). Reinterpretation and extension of entropy correction terms for residual distribution and discontinuous Galerkin schemes: Application to structure preserving discretization. Journal of Computational Physics, 453:110955.

Carstensen, C; Sauter, Stefan (2022). Critical functions and inf-sup stability of Crouzeix-Raviart elements. Computers & Mathematics with Applications, 108:12-23.

De Nard, Gianluca; Hediger, Simon; Leippold, Markus (2022). Subsampled Factor Models for Asset Pricing: The Rise of Vasa. Journal of Forecasting:Epub ahead of print.


Saikia, Eashan; Läubli, Nino F; Vogler, Hannes; Rüggeberg, Markus; Herrmann, Hans J; Burgert, Ingo; Burri, Jan T; Nelson, Bradley J; Grossniklaus, Ueli; Wittel, Falk K (2021). Correction to: Mechanical factors contributing to the Venus flytrap’s rate-dependent response to stimuli. Biomechanics and Modeling in Mechanobiology, 20(6):2299.

Tsirkin, Stepan S (2021). High performance Wannier interpolation of Berry curvature and related quantities with WannierBerri code. n p j Computational Materials, 7(1):33.

Saikia, Eashan; Läubli, Nino F; Vogler, Hannes; Rüggeberg, Markus; Herrmann, Hans J; Burgert, Ingo; Burri, Jan T; Nelson, Bradley J; Grossniklaus, Ueli; Wittel, Falk K (2021). Mechanical factors contributing to the Venus flytrap’s rate-dependent response to stimuli. Biomechanics and Modeling in Mechanobiology, 20(6):2287-2297.

Abgrall, Remi (2021). Editorial. Journal of Computational Physics, 445:110625.

Balakrishna, Suraj; Salazar-Vizcaya, Luisa; Schmidt, Axel J; Kachalov, Viacheslav; Kusejko, Katharina; Thurnheer, Maria Christine; Roth, Jan A; Nicca, Dunja; Cavassini, Matthias; Battegay, Manuel; Schmid, Patrick; Bernasconi, Enos; Günthard, Huldrych F; Rauch, Andri; Kouyos, Roger D; Swiss HIV Cohort Study (2021). Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: A modelling study. PLoS Computational Biology, 17(10):e1009529.

Flores Ramos, Stephany; Brugger, Silvio D; Escapa, Isabel Fernandez; Skeete, Chelsey A; Cotton, Sean L; Eslami, Sara M; Gao, Wei; Bomar, Lindsey; Tran, Tommy H; Jones, Dakota S; Minot, Samuel; Roberts, Richard J; Johnston, Christopher D; Lemon, Katherine P (2021). Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome. mSystems, 6(5):e0042521.

Zhou, Zhiyong; Weibel, Robert; Fu, Cheng; Winter, Stephan; Huang, Haosheng (2021). Indoor landmark selection for route communication: the influence of route-givers’ social roles and receivers’ familiarity with the environment. Spatial Cognition and Computation, 21(4):257-289.

Posada-Céspedes, Susana; Van Zyl, Gert; Montazeri, Hesam; Kuipers, Jack; Rhee, Soo-Yon; Kouyos, Roger; Günthard, Huldrych F; Beerenwinkel, Niko (2021). Comparing mutational pathways to lopinavir resistance in HIV-1 subtypes B versus C. PLoS Computational Biology, 17(9):e1008363.

Kumar, Ronit; Cheng, Lidong; Xiong, Yunong; Xie, Bin; Abgrall, Rémi; Xiao, Feng (2021). THINC scaling method that bridges VOF and level set schemes. Journal of Computational Physics, 436:110323.

Isenring, Julia; Geirnaert, Annelies; Hall, Alex R; Jans, Christoph; Lacroix, Christophe; Stevens, Marc J A (2021). In Vitro Gut Modeling as a Tool for Adaptive Evolutionary Engineering of Lactiplantibacillus plantarum. mSystems, 6(2):01085-20.

Abgrall, Rémi; Adams, Nikolaus; Chacon, Luis; Xiao, Feng (2021). Preface. Journal of Computational Physics, 430:110137.

Miraki, Mojdeh; Sohrabi, Hormoz; Fatehi, Parviz; Kneubühler, Mathias (2021). Individual tree crown delineation from high-resolution UAV images in broadleaf forest. Ecological Informatics, 61:101207.

Glaubitz, Jan; Le Mélédo, Elise; Öffner, Philipp (2021). Towards stable radial basis function methods for linear advection problems. Computers & Mathematics with Applications, 85:84-97.

Frey, Pascal M; Baer, Julian; Bergada-Pijuan, Judith; Lawless, Conor; Bühler, Philipp K; Kouyos, Roger D; Lemon, Katherine P; Zinkernagel, Annelies S; Brugger, Silvio D (2021). Quantifying Variation in Bacterial Reproductive Fitness: a High-Throughput Method. mSystems, 6(1):e01323-20.

Tepekule, Burcu; Hauser, Anthony; Kachalov, Viacheslav N; Andresen, Sara; Scheier, Thomas; Schreiber, Peter W; Günthard, Huldrych F; Kouyos, Roger D (2021). Assessing the potential impact of transmission during prolonged viral shedding on the effect of lockdown relaxation on COVID-19. PLoS Computational Biology, 17:e1008609.

Kachalov, Viacheslav N; Nguyen, Huyen; Balakrishna, Suraj; Salazar-Vizcaya, Luisa; Sommerstein, Rami; Kuster, Stefan P; Hauser, Anthony; Abel Zur Wiesch, Pia; Klein, Eili; Kouyos, Roger D (2021). Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level. PLoS Computational Biology, 17:e1008446.

Schönenberger, Lukas; Schmid, Alexander; Tanase, Radu; Beck, Mathias; Schwaninger, Markus (2021). Structural analysis of system dynamics models. Simulation Modelling Practice and Theory, 110:102333.

Moura, Rita; Borges, Margarida; Vila Pouca, Maria C P; Oliveira, Dulce A; Parente, Marco P L; Kimmich, Nina; Mascarenhas, Teresa; Natal, Renato M (2021). A numerical study on fetal head molding during labor. International Journal for Numerical Methods in Biomedical Engineering, 37(1):e3411.

Abgrall, Rémi; Le Mélédo, Élise; Öffner, Philipp (2021). General polytopal H(div)-conformal finite elements and their discretisation spaces. Mathematical Modelling and Numerical Analysis, 55:S677-S704.

Grossmann, Nicolas; Bernard, Jürgen; Sedlmair, Michael; Waldner, Manuela (2021). Does the Layout Really Matter? A Study on Visual Model Accuracy Estimation. In: IEEE Visualization Conference - Short Papers, virtual, 1 January 2021. IEEE, 61-65.

Pajarola, R; Suter, S K; Ballester-Ripoll, Rafael; Yang, Haiyan (2021). Tensor Approximation for Multidimensional and Multivariate Data. In: Özarslan, Evren; Schultz, Thomas; Zhang, Eugene; Fuster, Andrea. Anisotropy Across Fields and Scales. Cham: Springer, 73-98.


Trück, Johannes; van der Burg, Mirjam (2020). Development of adaptive immune cells and receptor repertoires from infancy to adulthood. Current Opinion in Systems Biology, 24:51-55.

San Roman, Magdalena; Wagner, Andreas (2020). Acetate and glycerol are not uniquely suited for the evolution of cross-feeding in E. coli. PLoS Computational Biology, 16(11):e1008433.

Schmutzer, Michael; Wagner, Andreas (2020). Gene expression noise can promote the fixation of beneficial mutations in fluctuating environments. PLoS Computational Biology, 16(10):e1007727.

Bouvel, Mathilde; Gambette, Philippe; Mansouri, Marefatollah (2020). Counting phylogenetic networks of level 1 and 2. Journal of Mathematical Biology, 81:1357-1395.

Henco, Lara; Diaconescu, Andreea O; Lahnakoski, Juha M; Brandi, Marie-Luise; Hörmann, Sophia; Hennings, Johannes; Hasan, Alkomiet; Papazova, Irina; Strube, Wolfgang; Bolis, Dimitris; Schilbach, Leonhard; Mathys, Christoph (2020). Aberrant computational mechanisms of social learning and decision-making in schizophrenia and borderline personality disorder. PLoS Computational Biology, 16(9):e1008162.

Hu, Yuhuang; Binas, Jonathan; Neil, Daniel; Liu, Shih-Chii; Delbruck, Tobi (2020). DDD20 End-to-End Event Camera Driving Dataset: Fusing Frames and Events with Deep Learning for Improved Steering Prediction. In: 2020 IEEE 23rd International Conference on Intelligent Transportation Systems (ITSC), Rhodes, 20 September 2020 - 23 September 2020, IEEE.

Pokropek, Artur; Schmidt, Peter; Davidov, Eldad (2020). Choosing priors in bayesian measurement invariance modeling: A Monte Carlo Simulation study. Structural Equation Modeling, 27(5):750-764.

Manica, Matteo; Kim, Hyunjae Ryan; Mathis, Roland; Chouvarine, Philippe; Rutishauser, Dorothea; De Vargas Roditi, Laura; Szalai, Bence; Wagner, Ulrich; Oehl, Kathrin; Saba, Karim; Pati, Arati; Saez-Rodriguez, Julio; Roy, Angshumoy; Parsons, Donald W; Wild, Peter J; Martínez, María Rodríguez; Sumazin, Pavel (2020). Inferring clonal composition from multiple tumor biopsies. NPJ systems biology and applications, 6(1):27.

Schweizer, Gabriel; Wagner, Andreas (2020). Genotype networks of 80 quantitative Arabidopsis thaliana phenotypes reveal phenotypic evolvability despite pervasive epistasis. PLoS Computational Biology, 16(8):e1008082.

Weyland, Mathias S; Thumser-Henner, Pauline; Nytko, Katarzyna J; Rohrer Bley, Carla; Ulzega, Simone; Petri-Fink, Alke; Lattuada, Marco; Füchslin, Rudolf M; Scheidegger, Stephan (2020). Holistic view on cell survival and DNA damage: how model-based data analysis supports exploration of dynamics in Biological systems. Computational and Mathematical Methods in Medicine, 2020:5972594.

Alfarano, Gianira Nicoletta; Lieb, Julia; Rosenthal, Joachim (2020). Construction of rate (n — 1 )/n non-binary LDPC convolutional codes via difference triangle sets. In: 2020 IEEE International Symposium on Information Theory (ISIT), Los Angeles, CA, USA, 21 June 2020 - 26 June 2020, IEEE.

Abgrall, Rémi (2020). Letter from the Editor: About “A linear, second-order, energy stable, fully adaptive finite-element method for phase-field modelling of wetting phenomena” by B. Aymard, U. Vaes, M. Pradras and S. Kalliadasis [J. Comput. Phys. X 2 (2019) 100010]. Journal of Computational Physics, 410:109494.

Tsionas, Mike G; Mamatzakis, Emmanuel; Ongena, Steven (2020). Does risk aversion affect bank output loss? The case of the Eurozone. European Journal of Operational Research, 282(3):1127-1145.

Fagerholm, Erik D; Foulkes, W M C; Gallero-Salas, Yasir; Helmchen, Fritjof; Friston, Karl J; Moran, Rosalyn J; Leech, Robert (2020). Conservation laws by virtue of scale symmetries in neural systems. PLoS Computational Biology, 16(5):e1007865.

Numminen, Elina; Laine, Anna-Liisa (2020). The spread of a wild plant pathogen is driven by the road network. PLoS Computational Biology, 16(3):e1007703.

Birrell, Paul J; Wernisch, Lorenz; Tom, Brian D M; Held, Leonhard; Roberts, Gareth O; Pebody, Richard G; De Angelis, Daniela (2020). Efficient real-time monitoring of an emerging influenza pandemic: How feasible? Annals of Applied Statistics, 14(1):74-93.

Kovaltsuk, Aleksandr; Raybould, Matthew I J; Wong, Wing Ki; Marks, Claire; Kelm, Sebastian; Snowden, James; Trück, Johannes; Deane, Charlotte M (2020). Structural diversity of B-cell receptor repertoires along the B-cell differentiation axis in humans and mice. PLoS Computational Biology, 16(2):e1007636.

Lang, Brian M; Kuipers, Jack; Misselwitz, Benjamin; Beerenwinkel, Niko (2020). Predicting colorectal cancer risk from adenoma detection via a two-type branching process model. PLoS Computational Biology, 16(2):e1007552.

O'Connor, Brian; Bojinski, Stephan; Röösli, Claudia; Schaepman, Michael E (2020). Monitoring global changes in biodiversity and climate essential as ecological crisis intensifies. Ecological Informatics, 55:101033.

Lustenberger, Michael; Spychiger, Florian; Malesevic, Sasa (2020). Towards a better understanding of the value of blockchains in supply chain management. In: Spychiger, Florian. Digitalisierung in der Praxis. Switzerland: Springer, 101-112.

Koch, Caleb M; Moise, Izabela; Helbing, Dirk; Donnay, Karsten (2020). Public debate in the media matters: evidence from the European refugee crisis. EPJ Data Science, 9(12):1-27.


Buoso, Stefano; Manzoni, Andrea; Alkadhi, Hatem; Plass, André; Quarteroni, Alfio; Kurtcuoglu, Vartan (2019). Reduced-order modeling of blood flow for noninvasive functional evaluation of coronary artery disease. Biomechanics and Modeling in Mechanobiology, 18(6):1867-1881.

Grosskurth, Elmar D; Bach, Dominik R; Economides, Marcos; Huys, Quentin J M; Holper, Lisa (2019). No substantial change in the balance between model-free and model-based control via training on the two-step task. PLoS Computational Biology, 15(11):e1007443.

Cieslewski, Titus; Derpanis, Konstantinos G; Scaramuzza, Davide (2019). SIPs: Succinct Interest Points from Unsupervised Inlierness Probability Learning. In: 2019 International Conference on 3D Vision (3DV), Québec City, QC, Canada, 16 October 2019 - 19 October 2019. IEEE, 604-613.

Ibrahim, Omnia; Skantze, Gabriel; Stoll, Sabine; Dellwo, Volker (2019). Fundamental Frequency Accommodation in Multi-Party Human-Robot Game Interactions: The Effect of Winning or Losing. In: Interspeech 2019, Graz, Austria, 15 September 2019 - 19 September 2019, INTERSPEECH.

Mayer, Sabrina Jasmin; Rathmann, Justus M K (2019). Changing Dynamics in an Emerging Field : Tracking authorship developments in the journal ‘Political Psychology’ 1985-2015. In: 17th International conference on Scientometrics & Infometrics ISSI 2019, Rome, Italy, 2 September 2019 - 5 September 2019. Editioni Efesto, 2505-2506.

Rathmann, Justus M K; Rauhut, Heiko (2019). Teams prevent misconduct: A study of retracted articles from the Web of Science. In: 17th International conference on Scientometrics & Infometrics ISSI 2019, Rome, Italy, 2 September 2019 - 5 September 2019. Editioni Efesto, 1032-1037.

Pokropek, Artur; Davidov, Eldad; Schmidt, Peter (2019). A Monte Carlo Simulation Study to Assess The Appropriateness of Traditional and Newer Approaches to Test for Measurement Invariance. Structural Equation Modeling, 26(5):724-744.

Kelly, Finnian; Fröhlich, Andrea; Dellwo, Volker; Forth, Oscar; Kent, Samuel; Alexander, Anil (2019). Evaluation of VOCALISE under conditions reflecting those of a real forensic voice comparison case (forensic_eval_01). Speech Communication, 112:30-36.

Schmid, Franca; Barrett, Matthew J P; Obrist, Dominik; Weber, Bruno; Jenny, Patrick (2019). Red blood cells stabilize flow in brain microvascular networks. PLoS Computational Biology, 15(8):e1007231.

Burovikhin, D; Sackmann, Benjamin; Schär, Merlin; Sim, J H; Eberhard, P; Lauxmann, M (2019). Investigation of Inhomogeneous Stiffness and Damping Characteristics of the Human Stapedial Annular Ligament. In: European Congress on Computational Methods in Applied Sciences and Engineering, Duisburg, 26 August 2019. Springer, 18-25.

Sackmann, Benjamin; Warnholtz, Birthe; Sim, Jae Hoon; Burovikhin, Dmitrii; Dalhoff, Ernst; Eberhard, Peter; Lauxmann, Michael (2019). Investigation of Tympanic Membrane Influences on Middle-Ear Impedance Measurements and Simulations. In: European Congress on Computational Methods in Applied Sciences and Engineering, Duisburg, 26 August 2019. Springer, 3-10.

Koppe, Georgia; Toutounji, Hazem; Kirsch, Peter; Lis, Stefanie; Durstewitz, Daniel (2019). Identifying nonlinear dynamical systems via generative recurrent neural networks with applications to fMRI. PLoS Computational Biology, 15(8):e1007263.

Abgrall, Rémi (2019). Editorial. Journal of Computational Physics, 390:iii-iv.

Libby, Eric; Hébert-Dufresne, Laurent; Hosseini, Sayed-Rzgar; Wagner, Andreas (2019). Syntrophy emerges spontaneously in complex metabolic systems. PLoS Computational Biology, 15(7):e1007169.

Kelava, Augustin; Brandt, Holger (2019). A Nonlinear Dynamic Latent Class Structural Equation Model. Structural Equation Modeling, 26(4):509-528.

Credé, Sascha; Thrash, Tyler; Hölscher, Christoph; Fabrikant, Sara I (2019). The acquisition of survey knowledge for local and global landmark configurations under time pressure. Spatial Cognition & Computation, 19(3):190-219.

Abgrall, Rémi; Bacigaluppi, Paola; Tokareva, Svetlana (2019). High-order residual distribution scheme for the time-dependent Euler equations of fluid dynamics. Computers & Mathematics with Applications, 78(2):274-297.

De Rita, Nicolo; Aimar, Alessandro; Delbruck, Tobi (2019). CNN-based Object Detection on Low Precision Hardware: Racing Car Case Study. In: 2019 IEEE Intelligent Vehicles Symposium (IV), Paris, 9 June 2019 - 12 June 2019, IEEE.

Hauser, Anthony; Kusejko, Katharina; Johnson, Leigh F; Wandeler, Gilles; Riou, Julien; Goldstein, Fardo; Egger, Matthias; Kouyos, Roger D (2019). Bridging the gap between HIV epidemiology and antiretroviral resistance evolution: Modelling the spread of resistance in South Africa. PLoS Computational Biology, 15(6):e1007083.

Pham, Van Thanh; Chassard, Christophe; Rifa, Etienne; Braegger, Christian; Geirnaert, Annelies; Rocha Martin, Vanesa Natalin; Lacroix, Christophe (2019). Lactate Metabolism Is Strongly Modulated by Fecal Inoculum, pH, and Retention Time in PolyFermS Continuous Colonic Fermentation Models Mimicking Young Infant Proximal Colon. mSystems, 4(4):e00264.

Solinas, Sergio M G; Edelmann, Elke; Leßmann, Volkmar; Migliore, Michele (2019). A kinetic model for Brain-Derived Neurotrophic Factor mediated spike timing-dependent LTP. PLoS Computational Biology, 15(4):e1006975.

Bouckaert, Remco; Vaughan, Timothy G; Barido-Sottani, Joëlle; Duchêne, Sebastián; Fourment, Mathieu; Gavryushkina, Alexandra; Heled, Joseph; Jones, Graham; Kühnert, Denise; De Maio, Nicola; Matschiner, Michael; Mendes, Fábio K; Müller, Nicola F; Ogilvie, Huw A; du Plessis, Louis; Popinga, Alex; Rambaut, Andrew; Rasmussen, David; Siveroni, Igor; Suchard, Marc A; Wu, Chieh-Hsi; Xie, Dong; Zhang, Chi; Stadler, Tanja; Drummond, Alexei J (2019). BEAST 2.5: An Advanced Software Platform for Bayesian Evolutionary Analysis. PLoS Computational Biology, 15(4):e1006650.

Bertoin, Jean (2019). Ergodic aspects of some Ornstein–Uhlenbeck type processes related to Lévy processes. Stochastic Processes and their Applications, 129(4):1443-1454.

Wüest, Dustin; Seyff, Norbert; Glinz, Martin (2019). FlexiSketch: a lightweight sketching and metamodeling approach for end-users. Software and Systems Modeling, 18(2):1513-1541.

Miladinović, Đorđe; Muheim, Christine; Bauer, Stefan; Spinnler, Andrea; Noain, Daniela; Bandarabadi, Mojtaba; Gallusser, Benjamin; Krummenacher, Gabriel; Baumann, Christian; Adamantidis, Antoine; Brown, Steven A; Buhmann, Joachim M (2019). SPINDLE: End-to-end learning from EEG/EMG to extrapolate animal sleep scoring across experimental settings, labs and species. PLoS Computational Biology, 15(4):e1006968.

Zhou, Fang; Lü, Linyuan; Mariani, Manuel (2019). Fast influencers in complex networks. Communications in Nonlinear Science and Numerical Simulation, 74:69-83.

Vinckier, Fabien; Rigoux, Lionel; Kurniawan, Irma T; Hu, Chen; Bourgeois-Gironde, Sacha; Daunizeau, Jean; Pessiglione, Mathias (2019). Sour grapes and sweet victories: How actions shape preferences. PLoS Computational Biology, 15:e1006499.

Meier-Gibbons, Frances; Töteberg-Harms, Marc (2019). Aqueous Humor Dynamics and Its Influence on Glaucoma. In: Giodoboni, Giovanna; Harris, Alon Harris; Sacco, Riccardo. Ocular Fluid Dynamics: Anatomy, Physiology, Imaging Techniques, and Mathematical Modeling. Cham: Springer, 191-213.

Wechsler, Daniel; Bascompte, Jordi (2019). Thresholds in the resilience of modular social networks to invasion by defectors. Journal of Theoretical Biology, 460:56-63.

Mutz, Rüdiger; Daniel, Hans-Dieter (2019). How Should We Measure Individual Researcher`s Performance Capacity Within and Between Universities? A Multilevel Extension of the Bibliometric Quotient (BQ). In: Catalano, G; Daraio, C; Gregori,, M; Moed,, H F; Ruoca, G. Proceedings of the 17th International Conference on Scientometrics & Informetrics ISSI, September 2-5, 2019 Sapienza University Rom, Italy. Rom, Italy: International Society for Scientometrics and Informetrics, 1098-1109.


Braun, S; Neil, D; Anumula, Jithendar; Ceolini, Enea; Liu, S-C (2018). Multi-channel attention for end-to-end speech recognition. In: Interspeech 2018, Hyderabad, India, 2 September 2018 - 6 September 2018. ISCA, 17-21.

Abgrall, Rémi (2018). A general framework to construct schemes satisfying additional conservation relations. Application to entropy conservative and entropy dissipative schemes. Journal of Computational Physics, 372:640-666.

Olveira, Sandro; Stojanovic, Ana; Seeger, Stefan (2018). Systematic parametric investigation on the CVD process of polysiloxane nano- and microstructures. Journal of Nanoparticle Research, 20(11):307.

Burtscher, Michael J; Jordi Ritz, Eva-Maria; Kolbe, Michaela (2018). Differences in talking-to-the-room behaviour between novice and expert teams during simulated paediatric resuscitation: a quasi-experimental study. BMJ Simulation & Technology Enhanced Learning, 4(4):165-170.

Dellwo, Volker; Kathiresan, Thayabaran; Pellegrino, Elisa; He, Lei; Schwab, Sandra; Maurer, Dieter (2018). Influences of fundamental oscillation on speaker identification in vocalic utterances by humans and computers. In: Interspeech 2018, Hyderabad, India, 2 September 2018 - 6 September 2018. ISCA, 3795-3799.

Leemann, Adrian; Schmid, Stephan; Studer-Joho, Dieter; Kolly, Marie-José (2018). Regional variation of /r/ in Swiss German dialects. In: Interspeech 2018, Hyderabad, India, 2 September 2018 - 6 September 2018. ISCA, 2738-2742.

Maurer, Dieter; d'Heureuse, Christian; Suter, Heidy; Dellwo, Volker; Friedrichs, Daniel; Kathiresan, Thayabaran (2018). The Zurich Corpus of Vowel and Voice Quality, Version 1.0. In: Interspeech, Hyderabad, India, 2 September 2018 - 6 September 2018. International Speech Communication Association (ISCA), 1417-1421.

Cliff, Oliver M; Harding, Nathan; Piraveenan, Mahendra; Erten, E Yagmur; Gambhir, Manoj; Prokopenko, Mikhail (2018). Investigating spatiotemporal dynamics and synchrony of influenza epidemics in Australia: An agent-based modelling approach. Elsevier Oceanography Series, 87:412-431.

Barbour, A D; McVinish, R; Pollett, P K (2018). Local approximation of a metapopulation’s equilibrium. Journal of Mathematical Biology, 77(3):765-793.

Katthagen, Teresa; Mathys, Christoph; Deserno, Lorenz; Walter, Henrik; Kathmann, Norbert; Heinz, Andreas; Schlagenhauf, Florian (2018). Modeling subjective relevance in schizophrenia and its relation to aberrant salience. PLoS Computational Biology, 14(8):e1006319.

Tzovara, Athina; Korn, Christoph W; Bach, Dominik R (2018). Human Pavlovian fear conditioning conforms to probabilistic learning. PLoS Computational Biology, 14(8):e1006243.

San Roman, Magdalena; Wagner, Andreas (2018). An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment. PLoS Computational Biology, 14(7):e1006340.

Quaglino, A; Pezzuto, S; Koutsourelakis, P S; Auricchio, A; Krause, R (2018). Fast uncertainty quantification of activation sequences in patient-specific cardiac electrophysiology meeting clinical time constraints. International Journal for Numerical Methods in Biomedical Engineering, 34(7):e2985.

Radom, Filip; Plückthun, Andreas; Paci, Emanuele (2018). Assessment of ab initio models of protein complexes by molecular dynamics. PLoS Computational Biology, 14(6):e1006182.

Nguyen, Anh Thy H; Rothacher, Yannick; Kunz, Andreas; Brugger, Peter; Lenggenhager, Bigna (2018). Effect of Environment Size on Curvature Redirected Walking Thresholds. In: 2018 IEEE Conference on Virtual Reality and 3D User Interfaces (VR), Reutlingen, 18 March 2018 - 22 March 2018. IEEE, 645-646.

Alegría, Alfredo; Porcu, Emilio; Furrer, Reinhard (2018). Asymmetric matrix-valued covariances for multivariate random fields on spheres. Journal of Statistical Computation and Simulation, 88(10):1850-1862.

Ballester-Ripoll, Rafael; Paredes, Enrique G; Pajarola, R (2018). Tensor Algorithms for Advanced Sensitivity Metrics. SIAM/ASA Journal on Uncertainty Quantification, 6(3):1172-1197.

Scherrer, Luca; Tomko, Martin; Ranacher, Peter; Weibel, Robert (2018). Travelers or locals? Identifying meaningful sub-populations from human movement data in the absence of ground truth. EPJ Data Science:7:19.


Muir, Dylan R; Molina-Luna, Patricia; Roth, Morgane M; Helmchen, Fritjof; Kampa, Björn M (2017). Specific excitatory connectivity for feature integration in mouse primary visual cortex. PLoS Computational Biology, 13(12):e1005888.

Meisser, Luzius (2017). The Code is the Model. International Journal of Microsimulation, 10(3):184-201.

Ashcroft, Peter; Manz, Markus G; Bonhoeffer, Sebastian (2017). Clonal dominance and transplantation dynamics in hematopoietic stem cell compartments. PLoS Computational Biology, 13(10):e1005803.

Kotelnikova, Ekaterina; Kiani, Narsis A; Abad, Elena; Martinez-Lapiscina, Elena H; Andorra, Magi; Zubizarreta, Irati; Pulido-Valdeolivas, Irene; Pertsovskaya, Inna; Alexopoulos, Leonidas G; Olsson, Tomas; Martin, Roland; Paul, Friedemann; Tegnér, Jesper; Garcia-Ojalvo, Jordi; Villoslada, Pablo (2017). Dynamics and heterogeneity of brain damage in multiple sclerosis. PLoS Computational Biology, 13(10):e1005757.

Abgrall, Rémi; Mishra, S (2017). Uncertainty quantification for hyperbolic systems of conservation laws. Handbook of Numerical Analysis, 18:507-544.

Abgrall, Rémi; Congedo, P. M; Geraci, G (2017). Towards a unified multiresolution scheme for treating discontinuities in differential equations with uncertainties. Mathematics and Computers in Simulation, 139:1-22.

Abgrall, Rémi; Koren, Barry (2017). Computational science for energy research. Journal of Computational Physics, 345:A1.

Grigonyte, Gintare; Schneider, Gerold (2017). Measuring Encoding Efficiency in Swedish and English Language Learner Speech Production. In: Interspeech 2017, Stockholm, 19 August 2017 - 24 August 2017. ISCA, 1779-1783.

Zihlmann, Urban (2017). The effects of real and placebo alcohol on deaffrication. In: Interspeech 2017, Stockholm, 19 August 2017 - 24 August 2017, 3882-3886.

Schoenenberger, Lukas; Tanase, Radu (2017). Controlling complex policy problems: A multimethodological approach using system dynamics and network controllability. Journal of Simulation, 12(2):162-170.

Rosenthal, Joachim; Randrianarisoa, Tovohery (2017). A decoding algorithm for twisted Gabidulin codes. In: 2017 IEEE International Symposium on Information Theory (ISIT), Aachen, Germany, 25 June 2017 - 30 June 2017, 2771-2774.

Napp, Diego; Pinto, Raquel; Rosenthal, Joachim; Vettori, Paolo (2017). MRD rank metric convolutional codes. In: IEEE International Symposium on Information Theory (ISIT), Aachen, 25 June 2017 - 30 June 2017, 2766-2770.

Ghazi, Parisa; Glinz, Martin (2017). ImitGraphs: towards faster usability tests of graphical model manipulation techniques. In: 9th International Workshop on Modeling in Software Engineering, Buenos Aires, 21 May 2017 - 22 May 2017. IEEE, 61-67.

Reimann, Olivier; Schumacher, Christian; Vetschera, Rudolf (2017). How well does the OWA operator represent real preferences? European Journal of Operational Research, 258(3):993-1003.

Hauser, Tobias U; Moutoussis, Michael; Iannaccone, Reto; Brem, Silvia; Walitza, Susanne; Drechsler, Renate; Dayan, Peter; Dolan, Raymond J (2017). Increased decision thresholds enhance information gathering performance in juvenile Obsessive-Compulsive Disorder (OCD). PLoS Computational Biology, 13(4):e1005440.

Majdik, András L; Till, Charles; Scaramuzza, Davide (2017). The Zurich urban micro aerial vehicle dataset. IEEE Robotics and Automation Letters, 36(3):269-273.

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Abgrall, Rémi (2017). Some Failures of Riemann Solvers. In: Abgrall, Rémi; Shu, Chi-Wang. Handbook of Numerical Methods for Hyperbolic Problems - Applied and Modern Issues. North Holland: Elsevier, 351-360.

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Devaine, Marie; Daunizeau, Jean (2017). Learning about and from others' prudence, impatience or laziness: The computational bases of attitude alignment. PLoS Computational Biology, 13(3):e1005422.

Kolly, Marie-José; Boula de Mareüil, Philippe; Leemann, Adrian; Dellwo, Volker (2017). Listeners use temporal information to identify French- and English-accented speech. Speech Communication, 86:121-134.

Castellví, Quim; Sánchez-Velázquez, Patricia; Moll, Xavier; Berjano, Enrique; Andaluz, Anna; Burdío, Fernando; Bijnens, Bart; Ivorra, Antoni (2017). Modeling liver electrical conductivity during hypertonic injection. International Journal for Numerical Methods in Biomedical Engineering, 34(1):e2904.

Aponte, Eduardo A; Schöbi, Dario; Stephan, Klaas E; Heinzle, Jakob (2017). The Stochastic Early Reaction, Inhibition, and late Action (SERIA) model for antisaccades. PLoS Computational Biology, 13(8):e1005692.

Wiedemair, Wolfgang; Tukovic, Zeljko; Jasak, Hrvoje; Poulikakos, Dimos; Kurtcuoglu, Vartan (2017). The breakup of intravascular microbubbles and its impact on the endothelium. Biomechanics and Modeling in Mechanobiology, (16):611-624.

Mueggler, Elias; Rebecq, Henri; Gallego, Guillermo; Delbruck, Tobi; Scaramuzza, Davide (2017). The event-camera dataset and simulator: Event-based data for pose estimation, visual odometry, and SLAM. International Journal of Robotics Research, 36(2):144-155.


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He, Lei; Dellwo, Volker (2016). A Praat-Based Algorithm to Extract the Amplitude Envelope and Temporal Fine Structure Using the Hilbert Transform. In: INTERSPEECH 2016, San Francisco, 8 September 2016 - 12 September 2016. ISCA, 530-534.

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Horlemann-Trautmann, Anna-Lena; Marshall, Kyle; Rosenthal, Joachim (2016). Considerations for rank-based cryptosystems. In: IEEE International Symposium on Information Theory (ISIT), Barcelona, 10 July 2016 - 15 July 2016. IEEE, 2544-2548.

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Tang, Kunkun; Congedo, Pietro M; Abgrall, Rémi (2016). Adaptive surrogate modeling by ANOVA and sparse polynomial dimensional decomposition for global sensitivity analysis in fluid simulation. Journal of Computational Physics, 314:557-589.

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Cadosch, Dominique; Abel zur Wiesch, Pia; Kouyos, Roger; Bonhoeffer, Sebastian (2016). The Role of Adherence and Retreatment in De Novo Emergence of MDR-TB. PLoS Computational Biology, 12(3):e1004749.

Falletta, Silvia; Sauter, Stefan A (2016). The panel-clustering method for the wave equation in two spatial dimensions. Journal of Computational Physics, 305:217-243.

Maire, Eric; Le Bourlot, Christophe; Adrien, Jérôme; Mortensen, Andreas; Mokso, Rajmund (2016). 20 Hz X-ray tomography during an in situ tensile test. International Journal of Fracture, 200(1-2):3-12.

Zavolokina, Liudmila; Dolata, Mateusz; Schwabe, Gerhard (2016). FinTech transformation: how it-enabled innovations shape the financial sector. In: Feuerriegel, Stefan; Neumann, Dirk. Enterprise Applications, Markets and Services in the Finance Industry. Germany: Springer, 75-88.

Bruggmann, André; Fabrikant, Sara I (2016). How does GIScience support spatio-temporal information search in the humanities? Spatial Cognition & Computation, 16(4):255-271.

Abgrall, Rémi; Bacigaluppi, Paola; Tokareva, Svetlana (2016). How to avoid mass matrix for linear hyperbolic problems. In: Karasözen, B; Manguoglu, M; Tezer-Sezgin, M; Göktepe, S; Ugur, Ö. Numerical Mathematics and Advanced Applications ENUMATH 2015. Cham: Springer, 75-86.

Scholkmann, Felix (2016). Long range physical cell-to-cell signalling via mitochondria inside membrane nanotubes: a hypothesis. Theoretical Biology and Medical Modelling, 13(1):16.

Derungs, Curdin; Purves, Ross S (2016). Mining nearness relations from an n-grams Web corpus in geographical space. Spatial Cognition & Computation, 16(4):301-322.

Sauter, Rafael; Held, Leonhard (2016). Quasi-complete separation in random effects of binary response mixed models. Journal of Statistical Computation and Simulation, 86(14):2781-2796.

Abgrall, Rémi; Amsallem, David; Crisovan, Roxana (2016). Robust model reduction by $\mathit{L^{1}}$-norm minimization and approximation via dictionaries: application to nonlinear hyperbolic problems. Advanced Modeling and Simulation in Engineering Sciences, 3(1):online.

Hosseini, Sayed-Rzgar; Wagner, Andreas (2016). The potential for non-adaptive origins of evolutionary innovations in central carbon metabolism. BMC Systems Biology, 10:97.

Lüthi, Hans P; Heinen, Stefan; Schneider, Gisbert; Glöss, Andreas; Brändle, Martin P; King, Rollin A; Pyzer-Knapp, Edward; Alharbi, Fahhad H; Kais, Sabre (2016). The quantum chemical search for novel materials and the issue of data processing: The InfoMol project. Journal of Computational Science, 15:65-73.


Bach, Dominik R (2015). Anxiety-like behavioural inhibition is normative under environmental threat-reward correlations. PLoS Computational Biology, 11(12):e1004646.

Thöny, Matthias; Billeter, Markus; Pajarola, Renato (2015). The future of scientific terrain visualization. In: ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, Bellevue, WA, USA, 3 November 2015 - 6 November 2015. ACM, 1-4.

Brumm, Johannes; Scheidegger, Simon; Mikushin, Dmitry; Schenk, Olaf (2015). Scalable high-dimensional dynamic stochastic economic modeling. Journal of Computational Science, 11:12-25.

Abgrall, Rémi; Congedo, Pietro Marco; Geraci, Gianluca; Rodio, Maria Giovanna (2015). Stochastic discrete equation method (sDEM) for two-phase flows. Journal of Computational Physics, 299:281-306.

Avanzi, Mathieu; Christodoulides, George (2015). Automatic Detection and Annotation of Disfluencies in Spoken French Corpora. In: Interspeech 2015, Dresden, 6 September 2015 - 10 September 2015. International Speech Communication Association, 1849-1853.

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Röthlisberger, Martina; Karipidis, Iliana I; Pleisch, Georgette; Dellwo, Volker; Richardson, Ulla; Brem, Silvia (2015). Swiss graphogame: concept and design presentation of a computerised reading intervention for children with high risk for poor reading outcomes. In: INTERSPEECH 2015, 16th Annual Conference of the International Speech Communication Association, Dresden, Germany, 6 September 2015 - 10 September 2015. Interspeech, 1878-1879.

Leemann, Adrian; Bernardasci, Camilla; Nolan, Francis (2015). The effect of speakers’regional varieties on listeners’ decision-making. In: Interspeech 2015, Dresden, 6 September 2015 - 10 September 2015. ISCA, 1670-1674.

Leemann, Adrian; Kolly, Marie-José; Goldman, Jean-Philippe; Dellwo, Volker; Hove, Ingrid; Almajai, Ibrahim; Grimm, Sarah; Robert, Sylvain (2015). Voice Äpp: A mobile app for crowdsourcing Swiss German dialect data. In: Interspeech 2015, Dresden, 6 September 2015 - 10 September 2015, 2804-2808.

Schick, Carl J; Weiss, Mona; Kolbe, Michaela; Marty, Adrian; Dambach, Micha; Knauth, Axel; Spahn, Donat R; Grote, Gudela; Grande, Bastian (2015). Simulation with PARTS (phase-augmented research and training scenarios): a structure facilitating research and assessment in simulation. Simulation in healthcare : journal of the Society for Simulation in Healthcare, 10(3):178-187.

Korn, Christoph W; Bach, Dominik R (2015). Maintaining homeostasis by decision-making. PLoS Computational Biology, 11(5):e1004301.

Bach, Dominik R (2015). A cost minimisation and Bayesian inference model predicts startle reflex modulation across species. Journal of Theoretical Biology, 370:53-60.

Siebourg-Polster, Juliane; Mudrak, Daria; Emmenlauer, Mario; Rämö, Pauli; Dehio, Christoph; Greber, Urs; Fröhlich, Holger; Beerenwinkel, Niko (2015). NEMix: Single-cell Nested Effects Models for Probabilistic Pathway Stimulation. PLoS Computational Biology, 11(4):e1004078.

Gallego, Guillermo; Yezzi, Anthony (2015). A Compact Formula for the Derivative of a 3-D Rotation in Exponential Coordinates. Journal of Mathematical Imaging and Vision, 51(3):378-384.

Schwaninger, Clemens Arthur; Menshykau, Denis; Iber, Dagmar (2015). Simulating organogenesis: Algorithms for the image-based determination of displacement fields. ACM Transactions on Modeling and Computer Simulation, 25(2):1-19.

Vayena, Effy; Salathé, Marcel; Madoff, Lawrence C; Brownstein, John S (2015). Ethical challenges of big data in public health. PLoS Computational Biology, 11(2):e1003904.

Abgrall, Rémi; de Santis, Dante (2015). Linear and non-linear high order accurate residual distribution schemes for the discretization of the steady compressible Navier–Stokes equations. Journal of Computational Physics, 283:329-359.

Krajbich, Ian; Hare, Todd A; Bartling, Björn; Morishima, Yosuke; Fehr, Ernst (2015). A common mechanism underlying food choice and social decisions. PLoS Computational Biology, 11(10):e1004371.

Rutishauser, Ueli; Slotine, Jean-Jaques; Douglas, Rodney (2015). Computation in cynamically bounded asymmetric systems. PLoS Computational Biology, 11(1):e1004039.

Barbour, A D; McVinish, R; Pollett, P K (2015). Connecting deterministic and stochastic metapopulation models. Journal of Mathematical Biology, 71(6-7):1481-1504.

Hosseini, Sayed-Rzgar; Barve, Aditya; Wagner, Andreas (2015). Exhaustive analysis of a genotype space comprising 1015 central carbon metabolisms reveals an organization conducive to metabolic innovation. PLoS Computational Biology, 11(8):e1004329.

Barbour, A D; Luczak, M J (2015). Individual and patch behaviour in structured metapopulation models. Journal of Mathematical Biology, 71(3):713-733.

Grabe, Volker; Bülthoff, Heinrich H; Scaramuzza, Davide; Giordano, Paolo Robuffo (2015). Nonlinear Ego-Motion Estimation from Optical Flow for Online Control of a Quadrotor UAV. International Journal of Robotics Research, 34(8):1114-1135.

Felekis, D; Vogler, H; Mecja, G; Muntwyler, S; Nestorova, A; Huang, T; Sakar, M S; Grossniklaus, U; Nelson, B J (2015). Real-time automated characterization of 3D morphology and mechanics of developing plant cells. International Journal of Robotics Research, 34(8):1136-1146.

Meyer, Sonja; Ruppen, Andreas; Hilty, Lorenz (2015). The things of the internet of things in BPMN. In: Persson, Anne; Stirna, Janis. Advanced Information Systems Engineering Workshops. Cham: Springer, 285-297.


Bolzoni, Paolo; Helmer, Sven; Wellenzohn, Kevin; Gamper, Johann; Andritsos, Periklis (2014). Efficient itinerary planning with category constraints. In: Proceedings of the 22nd ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, Dallas/Fort Worth, TX, USA, November 4-7, 2014, Dallas, 4 November 2014 - 7 November 2014. ACM, 203-212.

Vilar, François; Maire, Pierre-Henri; Abgrall, Rémi (2014). A discontinuous Galerkin discretization for solving the two-dimensional gas dynamics equations written under total Lagrangian formulation on general unstructured grids. Journal of Computational Physics, 276:188-234.

Jennings, G I; Prigge, D; Carney, S; Karni, S; Rauch, J B; Abgrall, Rémi (2014). Water wave propagation in unbounded domains. Part II: Numerical methods for fractional PDEs. Journal of Computational Physics, 275:443-458.

Agus, Marco; Gobbetti, Enrico; Jaspe Villanueva, Alberto; Mura, Claudio; Pajarola, R (2014). SOAR: Stochastic optimization for affine global point set registration. In: Proceedings Vision, Modeling and Visualization, Darmstadt, Germany, 8 October 2014 - 10 October 2014. The Eurographics Association, 103-110.

Wuest, Simon L; Richard, Stéphane; Walther, Isabelle; Furrer, Reinhard; Anderegg, Roland; Sekler, Jörg; Egli, Marcel (2014). A novel microgravity simulator applicable for three-dimensional cell culturing. Microgravity Science and Technology, 26(2):77-88.

Kolly, Marie-José; Leemann, Adrian; Dellwo, Volker (2014). Foreign accent recognition based on temporal information contained in lowpass-filtered speech. In: Interspeech 2014, Singapore, 14 September 2014 - 18 September 2014. International Speech Communication Association, 2175-2179.

Maurer, Dieter; Mok, Peggy; Friedrichs, Daniel; Dellwo, Volker (2014). Intelligibility of high-pitched vowel sounds in the singing and speaking of a female Cantonese Opera singer. In: Fifteenth Annual Conference of the International Speech Communication Association, Singapore, 14 September 2014 - 18 September 2014. ISCA, 2132-2133.

Dellwo, Volker; Mok, Peggy; Jenny, Mathias (2014). Rhythmic variability between some Asian languages: results from an automatic analysis of temporal characteristics. In: Interspeech 2014, Singapore, 14 September 2014 - 18 September 2014. International Speech Communication Association, 1708-1711.

He, Lei; Dellwo, Volker (2014). Speaker idiosyncratic variability of intensity across syllables. In: Interspeech 2014, Singapore, 14 September 2014 - 18 September 2014. International Speech Communication Association, 233-237.

Koch-Medina, Pablo; Munari, Cosimo (2014). Law-invariant risk measures: extension properties and qualitative robustness. Statistics & Risk Modeling, 31(3):1-22.

Abgrall, Rémi; Smolarkiewicz, Piotr; Xiao, Feng; Zaleski, Stéphane (2014). Frontiers in computational physics: modeling the earth system. Journal of Computational Physics, 271:1.

Payne, Joshua L; Wagner, Andreas (2014). Latent phenotypes pervade gene regulatory circuits. BMC Systems Biology, 8:64.

Stankevicius, Aistis; Huys, Quentin J M; Kalra, Aditi; Seriès, Peggy (2014). Optimism as a prior belief about the probability of future reward. PLoS Computational Biology, 10(5):e1003605.

Barve, Aditya; Hosseini, Sayed-Rzgar; Martin, Olivier C; Wagner, Andreas (2014). Historical contingency and the gradual evolution of metabolic properties in central carbon and genome-scale metabolisms. BMC Systems Biology, 8:48.

Balsara, Dinshaw S; Dumbser, Michael; Abgrall, Rémi (2014). Multidimensional HLLC Riemann solver for unstructured meshes – with application to Euler and MHD flows. Journal of Computational Physics, 261:172-208.

Abgrall, Rémi; Congedo, P M; Geraci, G (2014). A one-time truncate and encode multiresolution stochastic framework. Journal of Computational Physics, 257(Part A):19-56.

Abgrall, Rémi; Beaugendre, H; Dobrzynski, C (2014). An immersed boundary method using unstructured anisotropic mesh adaptation combined with level-sets and penalization techniques. Journal of Computational Physics, 257(Part A):83-101.

Bauer, Roman; Zubler, Frédéric; Pfister, Sabina; Hauri, Andreas; Pfeiffer, Michael; Muir, Dylan R; Douglas, Rodney J (2014). Developmental self-construction and -configuration of functional neocortical neuronal networks. PLoS Computational Biology, 10(12):e1003994.

Kollmorgen, Sepp; Hahnloser, Richard H R (2014). Dynamic alignment models for neural coding. PLoS Computational Biology, 10(3):e1003508.

Schmidt, Thomas S B; Matias Rodrigues, João F; von Mering, Christian (2014). Ecological consistency of SSU rRNA-based operational taxonomic units at a global scale. PLoS Computational Biology, 10(4):e1003594.

Smith, David R; Vinogradov, Serge N; Hoogewijs, David (2014). Hemoglobins in the genome of the cryptomonad Guillardia theta. Biology Direct, 9:7.

Diaconescu, Andreea O; Mathys, Christoph; Weber, Lilian A E; Daunizeau, Jean; Kasper, Lars; Lomakina, Ekaterina I; Fehr, Ernst; Stephan, Klaas E (2014). Inferring on the intentions of others by hierarchical bayesian learning. PLoS Computational Biology, 10(9):e1003810.

Feller, Chrystel; Gabriel, Jean-Pierre; Mazza, Christian; Yerly, Florence (2014). Pattern formation in auxin flux. Journal of Mathematical Biology, 68(4):879-909.

Meyer, Sebastian; Held, Leonhard (2014). Power-law models for infectious disease spread. Annals of Applied Statistics, 8(3):1612-1639.

Althaus, Christian L; Joos, Beda; Perelson, Alan S; Günthard, Huldrych F (2014). Quantifying the turnover of transcriptional subclasses of HIV-1-infected cells. PLoS Computational Biology, 10(10):e1003871.


Nax, Heinrich H; Pradelski, Bary S R; Young, H Peyton (2013). Decentralized dynamics to optimal and stable states in the assignment game. In: 2013 IEEE 52nd Annual Conference on Decision and Control (CDC), Firenze, 10 December 2013 - 13 December 2013. Institute of Electrical and Electronics Engineers, 2391-2397.

Payne, Joshua L; Wagner, Andreas (2013). Constraint and contingency in multifunctional gene regulatory circuits. PLoS Computational Biology, 9(6):e1003071.

Bank, Randolph E; Parsania, Asieh; Sauter, Stefan (2013). Saturation estimates for hp-finite element methods. Computing and Visualization in Science, 16(5):195-217.

Maire, Pierre-Henri; Abgrall, Rémi; Breil, Jérôme; Loubère, Raphaël; Rebourcet, Bernard (2013). A nominally second-order cell-centered Lagrangian scheme for simulating elastic–plastic flows on two-dimensional unstructured grids. Journal of Computational Physics, 235(15):626-665.

Abgrall, Rémi; Congedo, Pietro Marco (2013). A semi-intrusive deterministic approach to uncertainty quantification in non-linear fluid flow problems. Journal of Computational Physics, 235:828-845.

Dobay, Akos; Gall, Gabriella E C; Rankin, Daniel J; Bagheri, Homayoun C (2013). Renaissance model of an epidemic with quarantine. Journal of Theoretical Biology, 317:348-358.

Hess, Florian; Fürnstahl, Philipp; Gallo, Luigi-Maria; Schweizer, Andreas (2013). 3D analysis of the proximal interphalangeal joint kinematics during flexion. Computational and Mathematical Methods in Medicine, 2013:138063.

Lieder, Falk; Stephan, Klaas E; Daunizeau, Jean; Garrido, Marta I; Friston, Karl J (2013). A neurocomputational model of the mismatch negativity. PLoS Computational Biology, 9(11):e1003288.

Nessler, B; Pfeiffer, M; Büsing, L; Maass, W (2013). Bayesian computation emerges in generic cortical microcircuits through spike-timing-dependent plasticity. PLoS Computational Biology, 9(4):e1003037.

Bichsel, Manuel; Barbour, A D; Wagner, Andreas (2013). Estimating the fitness effect of an insertion sequence. Journal of Mathematical Biology, 66(1-2):95-114.

Schliebs, S; Kasabov, N (2013). Evolving spiking neural networks: A Survey. Evolving Systems:online.

Dominguez Gouvêa, Daniel; de A Assis D Muniz, Cyro; Pinto, Gilson A; Avritzer, Alberto; Leao, Rosa Maria Meri; de Souza e Silva, Edmundo; Diniz, Morganna Carmem; Berardinelli, Luca; Leite, Julius C B; Mossé, Daniel; Cai, Yuanfang; Dalton, Mike; Happe, Lucia; Koziolek, Anne (2013). Experience with model-based performance, reliability and adaptability assessment of a complex industrial architecture. Software and Systems Modeling, 12(4):765-787.

Lieder, Falk; Daunizeau, Jean; Garrido, Marta I; Friston, Karl J; Stephan, Klaas E (2013). Modelling trial-by-trial changes in the mismatch negativity. PLoS Computational Biology, 9(2):e1002911.

Buerzle, W; Haller, C M; Jabareen, M; Egger, J; Mallik, A S; Ochsenbein-Kölble, N; Ehrbar, M; Mazza, E (2013). Multiaxial mechanical behavior of human fetal membranes and its relationship to microstructure. Biomechanics and Modeling in Mechanobiology, 12(4):747-762.

Strobel, L A; Hild, N; Mohn, D; Stark, W J; Hoppe, A; Gbureck, U; Horch, R E; Kneser, U; Boccaccini, A R (2013). Novel strontium-doped bioactive glass nanoparticles enhance proliferation and osteogenic differentiation of human bone marrow stromal cells. Journal of Nanoparticle Research, 15(7):1780.

Palamara, Gian Marco; Delius, Gustav W; Smith, Matthew J; Petchey, Owen L (2013). Predation effects on mean time to extinction under demographic stochasticity. Journal of Theoretical Biology, 334:61-70.

Gubler, Stefanie; Endrizzi, Stefano; Gruber, Stephan; Purves, Ross S (2013). Sensitivities and uncertainties of modeled ground temperatures in mountain environments. Geoscientific Model Development, 6(4):1319-1336.

Zubler, Frederic; Hauri, Andreas; Pfister, Sabina; Bauer, Roman; Anderson, John C; Whatley, Adrian M; Douglas, Rodney J (2013). Simulating cortical development as a self constructing process: A novel multi-scale approach combining molecular and physical aspects. PLoS Computational Biology, 9(8):e1003173.

Beerenwinkel, Niko; Montazeri, Hesam; Schuhmacher, Heike; Knupfer, Patrick; von Wyl, Viktor; Furrer, Hansjakob; Battegay, Manuel; Hirschel, Bernard; Cavassini, Matthias; Vernazza, Pietro; Bernasconi, Enos; Yerly, Sabine; Böni, Jürg; Klimkait, Thomas; Cellerai, Cristina; Günthard, Huldrych F (2013). The individualized genetic barrier predicts treatment response in a large cohort of HIV-1 infected patients. PLoS Computational Biology, 9(8):e1003203.

Michel, Frank I; Schmitt, Kai-Uwe; Greenwald, Richard M; Russell, Kelly; Simpson, Frank I; Schulz, David; Langran, Mike (2013). White Paper: functionality and efficacy of wrist protectors in snowboarding—towards a harmonized international standard. Sports Engineering, 16(4):197-210.


Repin, S I; Samrowski, T S; Sauter, S A (2012). Combined a posteriori modelling-discretization error estimate for elliptic problems with variable coefficients. Mathematical Modelling and Numerical Analysis, 46(6):1389-1405.

Perony, Nicolas; Tessone, Claudio J; König, Barbara; Schweitzer, Frank (2012). How Random Is Social Behaviour? Disentangling Social Complexity through the Study of a Wild House Mouse Population. PLoS Computational Biology, 8(11):e1002786.

Jeanneret, Cédric; Glinz, Martin; Baudry, Benoit; Combemale, Benoit (2012). Impact of footprinting on model quality: an experimental evaluation. In: MoDRE 2012 - Second International Workshop on Model-Driven Requirements Engineering (MoDRE), Chicago, IL, USA, 24 September 2012, 77-86.

Ercolessi, E; Schiavina, M (2012). Geometry of mixed states for a q-bit and the quantum Fisher information tensor. Journal of Physics A: Mathematical and General, 45(36):365303-17pp.

Avella Gonzalez, Oscar J; van Aerde, Karlijn I; van Elburg, Ronald A J; Poil, Simon-Shlomo; Mansvelder, Huibert D; Linkenkaer-Hansen, Klaus; van Pelt, Jaap; van Ooyen, Arjen (2012). External drive to inhibitory cells induces alternating episodes of high- and low-amplitude oscillations. PLoS Computational Biology, 8(8):e1002666.

Piccinno, Fabiano; Gottschalk, Fadri; Seeger, Stefan; Nowack, Bernd (2012). Industrial production quantities and uses of ten engineered nanomaterials in Europe and the world. Journal of Nanoparticle Research, 14(9):1109-1120.

Matias Rodrigues, João F; Rankin, Daniel J; Rossetti, Valentina; Wagner, Andreas; Bagheri, Homayoun C (2012). Differences in cell division rates drive the evolution of terminal and differentiation in microbes. PLoS Computational Biology, 8(4):e1002468.

Najnudel, J; Nikeghbali, Ashkan (2012). On some universal sigma-finite measures related to a remarkable class of submartingales. Stochastic Processes and their Applications, 122(4):1582-1600.

Reboux, Sylvain; Schrader, Birte; Sbalzarini, Ivo F (2012). A self-organizing Lagrangian particle method for adaptive-resolution advection–diffusion simulations. Journal of Computational Physics, 231(9):3623-3646.

Gonnet, Pedro; Dimopoulos, Sotiris; Widmer, Lukas; Stelling, Jörg (2012). A specialized ODE integrator for the efficient computation of parameter sensitivities. BMC Systems Biology, 6:46.

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Barbour, A D (2001). Topics in Poisson approximation. In: Shanbhag, D N; Rao, C R. Stochastic processes: theory and methods. Amsterdam: Elsevier, 79-115.


Mittnik, Stefan; Paolella, Marc S (2000). Conditional density and value-at-risk prediciton of Asian currency exchange rates. Journal of Forecasting, 19(4):313-333.

Smarandache, R; Gluesing-Luerssen, H; Rosenthal, J (2000). Construction results for MDS-convolutional codes. In: IEEE. Proceedings 2000 IEEE International Symposium on Information Theory. Piscataway: IEEE Service Center, 294.

Feurstein, Markus; Natter, Martin (2000). Fast high precision decision rules for valuing manufacturing flexibility. European Journal of Operational Research, 120(1):108-117.

Reutterer, Thomas; Natter, Martin (2000). Segmentation Based Competitive Analysis with MULTICLUS and Topology Representing Networks. Computers & Operations Research, 27(11-12):1227-1247.


Barbour, A D; Utev, S (1999). Compound Poisson approximation in total variation. Stochastic Processes and their Applications, 82(1):89-125.

Mittnik, Stefan; Paolella, Marc S (1999). A simple estimator for the characteristic exponent of the stable paretian distribution. Mathematical and Computer Modelling, 29(10-12):161-176.

Hruschka, Harald; Natter, Martin (1999). Comparing performance of feed-forward neural nets and k-means for cluster-based market segmentation. European Journal of Operational Research, 114(2):346-353.


Reuter, Max; Ward, Paul I; Blanckenhorn, Wolf U (1998). An ESS Treatment of the Pattern of Female Arrival at the Mating Site in the Yellow Dung FlyScathophaga stercoraria (L.). Journal of Theoretical Biology, 195(3):363-370.

Smarandache, R; Rosenthal, J (1998). Convolutional code constructions resulting in maximal or near maximal free distance. In: 1998 IEEE International Symposium on Information Theory. Proceedings. Piscataway, NJ: IEEE, 308.

Allen, B; Rosenthal, J (1998). Parity-check decoding of convolutional codes whose systems parameters have desirable algebraic properties. In: 1998 IEEE International Symposium on Information Theory. Proceedings. Piscataway, NJ: IEEE, 307.


Chipot, M; March, R; Rosati, M; Vergara-Caffarelli, G (1997). Analysis of a nonconvex problem related to signal selective smoothing. Mathematical Models and Methods in Applied Sciences, 7(3):313-328.

Rosenthal, J (1997). Some interesting problems in systems theory which are of fundamental importance in coding theory. In: Michel, A N. Proceedings of the 36th IEEE Conference on Decision and Control. Piscataway, NJ, US: IEEE, 4574-4579.


Gentz, B (1996). An almost sure central limit theorem for the overlap parameters in the Hopfield model. Stochastic Processes and their Applications, 62(2):243-262.

Barbour, A D; Chryssaphinou, Ourania; Roos, Malgorzata (1996). Compound Poisson approximation in systems reliability. Naval Research Logistics, 43(2):251-264.


Rosenthal, J (1995). First order representations for convolutional encoders. In: Bhargava, V; Pursley, M. Proceedings 1995 IEEE International Symposium on Information Theory. Piscataway, NJ: IEEE, 165.


Barbour, A D; Kafetzaki, M (1993). A host-parasite model yielding heterogeneous parasite loads. Journal of Mathematical Biology, 31(2):157-176.

Gasser, Theo; Engel, Joachim; Seifert, Burkhardt (1993). Nonparametric function estimation. In: Rao, Calyampudi Radhakrishna. Computational statistics. Amsterdam: Elsevier, 423-463.


Barbour, A D; Brown, T (1992). Stein's method and point process approximation. Stochastic Processes and their Applications, 43(1):9-31.


Barbour, A D (1991). Modeling the overdispersion of parasite loads. Mathematical Biosciences, 107(2):249-253.


Bolthausen, E; Schmock, U (1989). On the maximum entropy principle for uniformly ergodic Markov chains. Stochastic Processes and their Applications, 33(1):1-27.


Bolthausen, E (1987). Markov process large deviations in τ-topology. Stochastic Processes and their Applications, 25(1):95-108.


Schatzmann, E; Gerrard, R; Barbour, A D (1986). Measures of Niche Overlap, I. Mathematical Medicine and Biology, 3(2):99-113.

Gerrard, R; Barbour, A D (1986). Measures of niche overlap. II. IMA J. Math. Appl. Med. Biol., 3(2):115-127.


Bolthausen, E (1984). On the asymptotic behaviour of the empirical random field of the Brownian motion. Stochastic Processes and their Applications, 16(2):199-204.


Chipot, M; Edelstein, L (1983). A mathematical theory of size distributions in tissue culture. Journal of Mathematical Biology, 16(2):115-130.

Barbour, A D (1983). Extreme values of Markov population processes. Stochastic Processes and their Applications, 14(3):297-313.


Bolthausen, E (1979). A central limit theorem for the sojourn times of strongly ergodic Markov chains. Stochastic Processes and their Applications, 9(2):217-222.


Barbour, A D (1978). A stochastic model for the transmission of bilharzia. Mathematical Biosciences, 38(3-4):303-312.

This list was generated on Sat Jun 25 02:32:29 2022 CEST.