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2024

Albery, Gregory F; Webber, Quinn M R; Farine, Damien; Picardi, Simona; Vander Wal, Eric; Manlove, Kezia R (2024). Expanding theory, methodology and empirical systems at the spatial–social interface. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 379(1912):20220534.

Hofmann, David Denis. Dispersal and Connectivity in Physical, Seasonal, and Extreme Landscapes. 2024, University of Zurich, Faculty of Science.

Driscoll, Isabel. Emotion Encoding in Meerkat Vocalisations. 2024, University of Zurich, Faculty of Science.

Kovalov, Viktor. Evolution of Sexual Signalling, Mate Choice, and Immunity Investment under Sexual Selection. 2024, University of Zurich, Faculty of Science.

Grysko, Raleigh. The Effect of Changing Temperature and Precipitation Extremes on Terrestrial Arctic Surface Energy Budget Partitioning. 2024, University of Zurich, Faculty of Science.

Sato, Yasuhiro; Shimizu-Inatsugi, Rie; Takeda, Kazuya; Schmid, Bernhard; Nagano, Atsushi J; Shimizu, Kentaro K (2024). Reducing herbivory in mixed planting by genomic prediction of neighbor effects in the field. Nature Communications, 15(1):8467.

Ogino, Mina; Farine, Damien R (2024). Collective intelligence facilitates emergent resource partitioning through frequency-dependent learning. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 379(1909):20230177.

Jokinen, Maija. Drivers of Viral Community Assembly in a Wild Plant Host. 2024, University of Zurich, Faculty of Science.

Bickel, Balthasar; Giraud, Anne-Lise; Zuberbühler, Klaus; van Schaik, Carel P (2024). Language follows a distinct mode of extra-genomic evolution. Physics of life reviews, 50:211-225.

Knüsel, Mara; Alther, Roman; Altermatt, Florian (2024). Pronounced changes of subterranean biodiversity patterns along a Late Pleistocene glaciation gradient. Ecography, 2024(8):e07321.

Churko, Gregory; Haibach, Genoveva; Bär, Moritz; Szerencsits, Erich; Schmidt, Benedikt R (2024). Use of agricultural fields by Natterjack toads: Implications for pesticide exposure. Agriculture, Ecosystems & Environment, 369:109049.

Papageorgiou, Danai; Cherono, Wismer; Gall, Gabriella; Nyaguthii, Brendah; Farine, Damien R (2024). Testing the information centre hypothesis in a multilevel society. Journal of Animal Ecology, 93(8):1147-1159.

Cosmo, Leandro G; Acquaviva, Julia N; Guimarães Jr, Paulo R; Pires, Mathias M (2024). Coevolutionary hotspots favour dispersal and fuel biodiversity in mutualistic landscapes under environmental changes. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 379(1907):20230133.

Ellington, Lindsey; Mercier, Stéphanie; Motes-Rodrigo, Alba; van de Waal, Erica; Forss, Sofia (2024). Urbanization does not increase “object curiosity” in vervet monkeys, but semi-urban individuals selectively explore food-related anthropogenic items. Current Zoology, 70(3):383-393.

Lemmen, Kimberley D; Pennekamp, Frank (2024). Food web context modifies predator foraging and weakens trophic interaction strength. Ecology Letters, 27(7):e14475.

Blackman, Rosetta C; Carraro, Luca; Keck, François; Altermatt, Florian (2024). Measuring the state of aquatic environments using eDNA—upscaling spatial resolution of biotic indices. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 379(1904):20230121.

Carraro, Luca; Ho, Hsi‐Cheng (2024). Mechanistic insights on riverine meta‐ecosystems: Network shape drives spatial biodiversity and trophic structures. Ecohydrology:Epub ahead of print.

Arango Isaza, Epifanía. Interdisciplinary Perspectives on South American Prehistory: Integrating Population Genetics and Ethical Considerations Towards Indigenous Communities. 2024, University of Zurich, Faculty of Science.

Guillen Otero, Thais. Mycorrhizal Symbiosis in Ferns: An Ancestral Tale of Light and Nutrients. 2024, University of Zurich, Faculty of Science.

Stoch, Fabio; Knüsel, Mara; Zakšek, Valerija; Alther, Roman; Salussolia, Alice; Altermatt, Florian; Fišer, Cene; Flot, Jean-François (2024). Integrative taxonomy of the groundwater amphipod Niphargus bihorensis Schellenberg, 1940 reveals a species-rich clade. Contributions to Zoology:1-25.

Forss, Sofia; Ciria, Alejandra; Clark, Fay; Galusca, Cristina‐loana; Harrison, David; Lee, Saein (2024). A transdisciplinary view on curiosity beyond linguistic humans: animals, infants, and artificial intelligence. Biological Reviews of the Cambridge Philosophical Society, 99(3):979-998.

Blackman, Rosetta; Couton, Marjorie; Keck, François; Kirschner, Dominik; Carraro, Luca; Cereghetti, Eva; Perrelet, Kilian; Bossart, Raphael; Brantschen, Jeanine; Zhang, Yan; Altermatt, Florian (2024). Environmental DNA: The next chapter. Molecular Ecology, 33(11):e17355.

Driscoll, Isabel; Briefer, Elodie; Manser, Marta B (2024). The role of neighbour proximity and context on meerkat close call acoustic structure. Animal Behaviour, 212:113-126.

Brandl, Hanja B; Abdu, Salamatu; Farine, Damien R (2024). Experimental manipulation of food availability and macroparasite prevalence reveal differential effects on space use in wild rodents. Journal of Animal Ecology, 93(6):650-653.

Brantschen, Jeanine; Fopp, Fabian; Adde, Antoine; Keck, François; Guisan, Antoine; Pellissier, Loïc; Altermatt, Florian (2024). Habitat suitability models reveal the spatial signal of environmental DNA in riverine networks. Ecography, 2024(8):e07267.

Perry, William Bernard; Seymour, Mathew; Orsini, Luisa; Jâms, Ifan Bryn; Milner, Nigel; Edwards, François; Harvey, Rachel; de Bruyn, Mark; Bista, Iliana; Walsh, Kerry; Emmett, Bridget; Blackman, Rosetta; Altermatt, Florian; Lawson Handley, Lori; Mächler, Elvira; Deiner, Kristy; Bik, Holly M; Carvalho, Gary; Colbourne, John; Cosby, Bernard Jack; Durance, Isabelle; Creer, Simon (2024). An integrated spatio-temporal view of riverine biodiversity using environmental DNA metabarcoding. Nature Communications, 15(1):4372.

Liao, Chun-Chieh; Magrath, Robert D; Manser, Marta B; Farine, Damien R (2024). The relative contribution of acoustic signals versus movement cues in group coordination and collective decision-making. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 379(1905):20230184.

van de Leemput, Ingrid A; Bascompte, Jordi; Buddendorf, Willem Bastiaan; Dakos, Vasilis; Lever, J Jelle; Scheffer, Marten; van Nes, Egbert H (2024). Transformation starts at the periphery of networks where pushback is less. Scientific Reports, 14(1):11344.

Brenninger, Franziska Andrea. Optimal Immunity, Reproductive Manipulation, and Dispersal in Host-Parasite Interactions. 2024, University of Zurich, Faculty of Science.

Zemlianskii, Vitalii. Plant Diversity of the Russian Arctic: Providing a Baseline for Arctic Change and Conservation Research. 2024, University of Zurich, Faculty of Science.

Passmore, Sam; Wood, Anna L C; Barbieri, Chiara; Shilton, Dor; Daikoku, Hideo; Atkinson, Quentin D; Savage, Patrick E (2024). Global musical diversity is largely independent of linguistic and genetic histories. Nature Communications, 15(1):3964.

Moor, Helen; Bergamini, Ariel; Vorburger, Christoph; Holderegger, Rolf; Bühler, Christoph; Bircher, Nicolas; Schmidt, Benedikt R (2024). Building pondscapes for amphibian metapopulations. Conservation Biology:Epub ahead of print.

Carraro, Luca; Altermatt, Florian (2024). eDITH: An R‐package to spatially project eDNA‐based biodiversity across river networks with minimal prior information. Methods in Ecology and Evolution, 15(5):806-815.

Perrelet, Kilian; Moretti, Marco; Dietzel, Andreas; Altermatt, Florian; Cook, Lauren M (2024). Engineering blue-green infrastructure for and with biodiversity in cities. npj Urban Sustainability, 4(1):27.

Pedraza Perez, Fernando. The Coevolutionary Process of Communities. 2024, University of Zurich, Faculty of Science.

Wechsler, Daniel; Bascompte, Jordi (2024). Mechanistic interactions as the origin of modularity in biological networks. Proceedings of the Royal Society of London, Series B: Biological Sciences, 291(2021):20240269.

Camerlenghi, Ettore; Nolazco, Sergio; Farine, Damien R; Magrath, Robert D; Peters, Anne (2024). Social restructuring during harsh environmental conditions promotes cooperative behaviour in a songbird. Proceedings of the Royal Society of London, Series B: Biological Sciences, 291(2021):20232427.

Müller, Rhonda C; Kim, Jin-Soo; Lee, Hanna; Muri, Helene; Tjiputra, Jerry; Yoon, Jin-Ho; Schaepman-Strub, Gabriela (2024). Radiative forcing geoengineering causes higher risk of wildfires and permafrost thawing over the Arctic regions. Communications Earth & Environment, 5:180.

Jeevannavar, Aditya; Narwani, Anita; Matthews, Blake; Spaak, Piet; Brantschen, Jeanine; Mächler, Elvira; Altermatt, Florian; Tamminen, Manu (2024). Foundation species stabilize an alternative eutrophic state in nutrient-disturbed ponds via selection on microbial community. Frontiers in Microbiology, 15:1310374.

Ho, Hsi‐Cheng; Altermatt, Florian (2024). Associating the structure of Lepidoptera‐plant interaction networks across clades and life stages to environmental gradients. Journal of Biogeography, 51(4):725-738.

Zong, Shuo; Brantschen, Jeanine; Zhang, Xiaowei; Albouy, Camille; Valentini, Alice; Zhang, Heng; Altermatt, Florian; Pellissier, Loïc (2024). Combining environmental DNA with remote sensing variables to map fish species distributions along a large river. Remote Sensing in Ecology and Conservation, 10(2):220-235.

Romero-Haro, A A; Maldonado-Chaparro, A A; Pérez-Rodríguez, L; Bleu, J; Criscuolo, F; Zahn, S; Farine, D R; Boogert, N J (2024). Males with high levels of oxidative damage form weak pair bonds in a gregarious bird species. Animal Behaviour, 210:11-22.

Schmidt, Robin; Dufresnes, Christophe; Krištín, Anton; Künzel, Sven; Vences, Miguel; Hawlitschek, Oliver (2024). Phylogenetic insights into Central European Chorthippus and Pseudochorthippus (Orthoptera: Acrididae) species using ddRADseq data. Molecular Phylogenetics and Evolution, 193:108012.

Leibniz Research Network Biodiversity.; Thonicke, Kirsten; Rahner, Eva; Arneth, Almut; Bonn, Aletta; Borchard, Nils; Chaudhary, Abishek; Darbi, Marianne; Dutta, Trishna; Eberle, Ute; Eisenhauer, Nico; Farwig, Nina; Flocco, Cecilia G; Freitag, Jens; Grobe, Peter; Grosch, Rita; Grossart, Hans Peter; Grosse, Angela; Grützmacher, Kim; Hagemann, Nina; Hansjürgens, Bernd; Hartmann Scholz, Amber; Hassenrück, Christiane; Häuser, Christoph; Hickler, Thomas; Hölker, Franz; Jacob, Ute; Jähnig, Sonja C; Jürgens, Klaus; Krug, Cornelia; et al (2024). 10 Must Knows from Biodiversity Science 2024. Potsdam: Potsdam Institute for Climate Impact Research.

Gourgoulianni, Natalia. Life History Responses to Natural and Artificial Stressors in Dung Flies (Diptera: Sepsidae). 2024, University of Zurich, Faculty of Science.

Dagtekin, Asegul Dilsad. Seasonality in Wildlife Populations Across Different Data Resolutions. 2024, University of Zurich, Faculty of Science.

Graf, Tanja. The Control of Invasive and Native Scarab Beetles with the Entomopathogenic Fungi $\textit{Metarhizium brunneum}$ and $\textit{Beauveria brongniartii}$. 2024, University of Zurich, Faculty of Science.

Hug, David. Unravelling the Thermoregulatory Behaviour of Mosquitoes and Biting Midges: Exploring the Impact of Pathogens, Selection, and Acclimation. 2024, University of Zurich, Faculty of Science.

Rietze, Nils; Assmann, Jakob J; Plekhanova, Elena; Naegeli, Kathrin; Damm, Alexander; Maximov, Trofim C; Karsanaev, Sergey V; Hensgens, Geert; Schaepman-Strub, Gabriela (2024). Summer drought weakens land surface cooling of tundra vegetation. Environmental Research Letters, 19(4):044043.

Meier, Sara Andrea. Biological Rhythms and Sleep in Reindeer ($\textit{Rangifer tarandus tarandus}$) across Arctic Seasons. 2024, University of Zurich, Faculty of Science.

Ettwein, Antonia. Space Use of the White-Backed Woodpecker in a Heterogeneous Landscape: Implications for Forest Management. 2024, University of Zurich, Faculty of Science.

Cereghetti, Eva. Stream Ecosystems and Terrestrial Resources: a Temporal Perspective on Detritus Cycling and Keystone Shredders. 2024, University of Zurich, Faculty of Science.

Peller, Tianna; Altermatt, Florian (2024). Invasive species drive cross-ecosystem effects worldwide. Nature Ecology and Evolution, 8(6):1087-1097.

Grysko, Raleigh; Kim, Jin-Soo; Schaepman-Strub, Gabriela (2024). Arctic springtime temperature and energy flux interannual variability is driven by 1- to 2-week frequency atmospheric events. Weather and Climate Extremes, 43:100650.

Weber, Tobias; Ozgul, Arpat; Schmidt, Benedikt R (2024). Density-dependent performance of larval and juvenile toads: Implications for amphibian conservation. Basic and Applied Ecology, 75:12-17.

Farine, Damien R (2024). Modelling animal social networks: New solutions and future directions. Journal of Animal Ecology, 93(3):250-253.

Zemlianskii, Vitalii; Brun, Philipp; Zimmermann, Niklaus E; Ermokhina, Ksenia; Khitun, Olga; Koroleva, Natalia; Schaepman‐Strub, Gabriela (2024). Current and past climate co‐shape community‐level plant species richness in the Western Siberian Arctic. Ecology and Evolution, 14(3):e11140.

Van de Schoot, Evert; Merckx, Thomas; Ebert, Dieter; Wesselingh, Renate A; Altermatt, Florian; Van Dyck, Hans (2024). Evolutionary change in flight-to-light response in urban moths comes with changes in wing morphology. Biology Letters, 20(3):20230486.

Churko, Greg; Szerencsits, Erich; Aldrich, Annette; Schmidt, Benedikt R (2024). Spatial analysis of the potential exposure of amphibians to plant protection products at the landscape scale. Basic and Applied Ecology, 76:14-24.

Catitti, Benedetta. Carry-Over Effects across Life Stages in Red Kites $\textit{Milvus milvus}$. 2024, University of Zurich, Faculty of Science.

Dagtekin, Dilsad; Ertürk, Alper; Sommer, Stefan; Ozgul, Arpat; Soyumert, Anil (2024). Seasonal habitat-use patterns of large mammals in a human-dominated landscape. Journal of Mammalogy, 105(1):122-133.

Brantschen, Jeanine; Altermatt, Florian (2024). Contrasting strengths of eDNA and electrofishing compared to historic records for assessing fish community diversity and composition. Canadian Journal of Fisheries and Aquatic Sciences, 81(2):178-189.

Catitti, Benedetta; Grüebler, Martin U; Farine, Damien R; Kormann, Urs G (2024). Natal legacies cause social and spatial marginalization during dispersal. Ecology Letters, 27(2):e14366.

Fronhofer, Emanuel A; Govaert, Lynn; O'Connor, Mary I; Schreiber, Sebastian J; Altermatt, Florian (2024). The shape of density dependence and the relationship between population growth, intraspecific competition and equilibrium population density. Oikos, 2024(2):e09824.

Stockenhuber, Reinhold; Akiyama, Reiko; Tissot, Nicolas; Milosavljevic, Stefan; Yamazaki, Misako; Wyler, Michele; Arongaus, Adriana B; Podolec, Roman; Sato, Yasuhiro; Widmer, Alex; Ulm, Roman; Shimizu, Kentaro K (2024). The UV RESISTANCE LOCUS 8-Mediated UV-B Response Is Required Alongside CRYPTOCHROME 1 For Plant Survival Under Sunlight In Field Conditions. Plant & Cell Physiology, 65(1):35-48.

Papageorgiou, Danai; Nyaguthii, Brendah; Farine, Damien R (2024). Compromise or choose: shared movement decisions in wild vulturine guineafowl. Communications Biology, 7(1):95.

Klarevas-Irby, James A; Farine, Damien R (2024). Diel patterns of movement reveal temporal strategies during dispersal. Animal Behaviour, 207:119-129.

Obrist, Debora S; Hanly, Patrick J; Kennedy, Jeremiah C; Fitzpatrick, Owen T; Wickham, Sara B; Nijland, Wiebe; Reshitnyk, Luba Y; Darimont, Chris T; Starzomski, Brian M; Reynolds, John D (2024). Equivalent roles of marine subsidies and island characteristics in shaping island bird communities. Journal of Biogeography, 51(1):40-53.

Saccò, Mattia; Mammola, Stefano; Altermatt, Florian; Alther, Roman; Bolpagni, Rossano; Brancelj, Anton; Brankovits, David; Fišer, Cene; Gerovasileiou, Vasilis; Griebler, Christian; Guareschi, Simone; Hose, Grant C; Korbel, Kathryn; Lictevout, Elisabeth; Malard, Florian; Martínez, Alejandro; Niemiller, Matthew L; Robertson, Anne; Tanalgo, Krizler C; Bichuette, Maria Elina; Borko, Špela; Brad, Traian; Campbell, Matthew A; Cardoso, Pedro; Celico, Fulvio; Cooper, Steven J B; Culver, David; Di Lorenzo, Tiziana; Galassi, Diana M P; Guzik, Michelle T; et al (2024). Groundwater is a hidden global keystone ecosystem. Global Change Biology, 30(1):e17066.

Olivares, Ingrid; Tusso, Sergio; José Sanín, María; de La Harpe, Marylaure; Loiseau, Oriane; Rolland, Jonathan; Salamin, Nicolas; Kessler, Michael; Shimizu, Kentaro K; Paris, Margot (2024). Hyper-Cryptic radiation of a tropical montane plant lineage. Molecular Phylogenetics and Evolution, 190:107954.

Lieberherr, Eva; Brantschen, Evelyn Coleman; Wilkes-Allemann, Jerylee; Ohmura, Tamaki (2024). Legitimität der Schweizer Waldpolitik 2020: Zusammenspiel zwischen Partizipation, Effizienz und Wirkung. Schweizerische Zeitschrift für Forstwesen (Swiss Forestry Journal), 175(1):12-18.

Pedraza, Fernando; Liu, Hanlun; Gawecka, Klementyna A; Bascompte, Jordi (2024). The Role of Indirect Effects in Coevolution along the Mutualism-Antagonism Continuum. The American Naturalist, 203(1):28-42.

Panaccio, Matteo; Brambilla, Alice; Bassano, Bruno; Smith, Tessa; von Hardenberg, Achaz (2024). Monitoring wildlife population trends with sample counts: a case study on the Alpine ibex (Capra ibex). Wildlife Biology, 2024(1):e01162.

Mora Carrera, Carlos Emiliano; Stubbs, Rebecca L; Potente, Giacomo; Yousefi, Narjes; Aeschbacher, Simon; Keller, Barbara; Choudhury, Rimjhim Roy; Celep, Ferhat; Kochjarová, Judita; de Vos, Jurriaan M; Szövenyi, Peter; Conti, Elena (2024). Unveiling the Genome-Wide Consequences of Range Expansion and Mating System Transitions in Primula vulgaris. Genome Biology and Evolution, 16(10):evae208.

Moor, Helen; Bergamini, Ariel; Holderegger, Rolf; Vorburger, Christoph; Schmidt, Benedikt (2024). Weiherbau führt zu einer Erholung der Amphibienbestände. ÖGH-Aktuell, 68(3):4-7.

2023

Zhang, Yan; Zhang, Xiaowei; Li, Feilong; Altermatt, Florian (2023). Fishing eDNA in One of the World’s Largest Rivers: A Case Study of Cross-Sectional and Depth Profile Sampling in the Yangtze. Environmental Science & Technology, 57(51):21691-21703.

Bandini, Elisa; Tennie, Claudio (2023). Naïve, adult, captive chimpanzees do not socially learn how to make and use sharp stone tools. Scientific Reports, 13(1):22733.

Hawlitschek, Oliver; Bruns, Carsten; Dey, Lara-Sophie; Nuhlíčková, Soňa; Felix, Rob; van Kleef, Hein; Nakel, Jacqueline; Husemann, Martin (2023). The Genomics of Isolated Populations of Gampsocleis glabra (Orthoptera: Tettigoniidae) in Central and Western Europe. Insects, 14(12):946.

Liao, Wenbo; Jiang, Ying; Jin, Long; Lüpold, Stefan (2023). How hibernation in frogs drives brain and reproductive evolution in opposite directions. eLife, 12:RP88236.

Kopp, Emanuel Balthasar; Niklaus, Pascal A; Wuest, Samuel E (2023). Ecological principles to guide the development of crop variety mixtures. Journal of Plant Ecology, 16(6):rtad017.

Schnyder, Elvira; Bodelier, Paul L E; Hartmann, Martin; Henneberger, Ruth; Niklaus, Pascal A (2023). Experimental erosion of microbial diversity decreases soil CH$_4$ consumption rates. Ecology, 104(12):e4178.

Giesen, Athene; Blanckenhorn, Wolf U; Schäfer, Martin A; Shimizu, Kentaro K; Shimizu-Inatsugi, Rie; Misof, Bernhard; Podsiadlowski, Lars; Niehuis, Oliver; Lischer, Heidi E L; Aeschbacher, Simon; Kapun, Martin (2023). Geographic Variation in Genomic Signals of Admixture Between Two Closely Related European Sepsid Fly Species. Evolutionary Biology, 50(4):395-412.

Krug, Rainer M; Petchey, Owen L (2023). Microxanox: An R package for simulating an aquatic MICRobial ecosystem that can occupy OXic or ANOXic states. SoftwareX, 24:101539.

Menéndez, Lumila Paula; Barbieri, Chiara; López Cruz, Idalia Guadalupe; Schmelzle, Thomas; Breidenstein, Abagail M; Barquera, Rodrigo; Borzi, Guido; Schuenemann, Verena J; Sanchez-Villagra, Marcelo R (2023). On Roth’s “human fossil” from Baradero, Buenos Aires Province, Argentina: morphological and genetic analysis. Swiss Journal of Palaeontology, 142(1):26-45.

Beck, Kristina B; Farine, Damien R; Firth, Josh A; Sheldon, Ben C (2023). Variation in local population size predicts social network structure in wild songbirds. Journal of Animal Ecology, 92(12):2348-2362.

Yew, Chow-Lih; Tsuchimatsu, Takashi; Shimizu-Inatsugi, Rie; Yasuda, Shinsuke; Hatakeyama, Masaomi; Kakui, Hiroyuki; Ohta, Takuma; Suwabe, Keita; Watanabe, Masao; Takayama, Seiji; Shimizu, Kentaro K (2023). Dominance in self-compatibility between subgenomes of allopolyploid Arabidopsis kamchatica shown by transgenic restoration of self-incompatibility. Nature Communications, 14(1):7618.

Arango-Isaza, Epifanía; Aninao, María José; Campbell, Roberto; Martinez, Felipe I; Shimizu, Kentaro K; Barbieri, Chiara (2023). Bridging the gap: returning genetic results to indigenous communities in Latin America. Frontiers in Genetics, 14:1304974.

Papkou, Andrei; Garcia-Pastor, Lucia; Escudero, José Antonio; Wagner, Andreas (2023). A rugged yet easily navigable fitness landscape. Science, 382(6673):eadh3860.

Kirschner, Dominik; Zhang, Yan; Zhong, Wenjun; Zhang, Xiaowei; Pellissier, Loïc; Altermatt, Florian (2023). Homogeneity in terrestrial land cover is reflected in fish diversity patterns in a Chinese river system. Environmental DNA, 5(6):1679-1690.

Ghosh, Shyamolina; Petchey, Owen (2023). Spatial synchrony at the extremes: Tail-dependence in temperature drives tail-dependence in birds’ spatial synchrony across North America. Authorea 86737085.

Robinson, M L; Hahn, P G; Inouye, B D; Underwood, N; Whitehead, S R; Abbott, K C; Bruna, E M; Cacho, N I; Dyer, L A; Abdala-Roberts, L; Allen, W J; Andrade, J F; Angulo, D F; Anjos, D; Anstett, D N; Bagchi, R; Bagchi, S; Barbosa, M; Barrett, S; Baskett, C A; Ben-Simchon, E; Bloodworth, K J; Bronstein, J L; Buckley, Y M; Burghardt, K T; Bustos-Segura, C; Calixto, E S; Carvalho, R L; Castagneyrol, B; Sato, Yasuhiro; et al (2023). Plant size, latitude, and phylogeny explain within-population variability in herbivory. Science, 382(6671):679-683.

Duncan, Chris; Thorley, Jack; Manser, Marta B; Clutton-Brock, Tim (2023). Dominance loss and tenure maintenance in Kalahari meerkats. Behavioral Ecology, 34(6):979-991.

Daugaard, Uriah; Merkli, Stefanie; Merz, Ewa; Pomati, Francesco; Petchey, Owen L (2023). The dependence of forecasts on sampling frequency as a guide to optimizing monitoring in community ecology. bioRxiv 545268, Cold Spring Harbor Laboratory.

Harvey, Eric; Marleau, Justin N; Gounand, Isabelle; Leroux, Shawn J; Firkowski, Carina R; Altermatt, Florian; Guillaume Blanchet, F; Cazelles, Kevin; Chu, Cindy; D'Aloia, Cassidy C; Donelle, Louis; Gravel, Dominique; Guichard, Frédéric; McCann, Kevin; Ruppert, Jonathan L W; Ward, Colette; Fortin, Marie‐Josée (2023). A general meta‐ecosystem model to predict ecosystem functions at landscape extents. Ecography, 2023(11):e06790.

Halliday, Fletcher W; Cappelli, Seraina L; Laine, Anna‐Liisa (2023). Multiple dimensions of biodiversity mediate effects of temperature on invertebrate herbivory in a montane grassland. Oikos, 2023(11):e10028.

Birchmeier, Kristina; Johnson-Ulrich, Lily; Stein, Joana; Forss, Sofia (2023). The Role of Umwelt in Animal Curiosity: A Within and Between Species Comparison of Novelty Exploration in Mongooses. Animal Behavior and Cognition, 10(4):329-354.

Giannopoulos, Athanasios-Stefanos; Giannakou, Lydia; Gourgoulianni, Natalia; Pitaraki, Eleanna; Jagirdar, Rajesh; Marnas, Periklis; Tzamalas, Panagiotis I; Rouka, Erasmia; Livanou, Eleni; Hatzoglou, Chrissi; Gourgoulianis, Konstantinos; Lüpold, Stefan; Blanckenhorn, Wolf U; Zarogiannis, Sotirios G (2023). The effect of cigarette smoke extract exposure on the size and sexual behaviour of Drosophila melanogaster. Environmental Toxicology and Pharmacology, 104:104325.

Barel, Janna M; Petchey, Owen L; Ghaffouli, Abir; Jassey, Vincent E J (2023). Uncovering microbial food webs using machine learning. Soil Biology and Biochemistry, 186:109174.

Schmidt, Benedikt R (2023). Auftausalz und Amphibien. Feldherpetologisches Magazin, 20:35-38.

Schmidt, Benedikt (2023). Die Amphibien und Reptilien des Baselbiets: Ein attraktiver, aber gefährdeter Teil unserer Fauna. Baselbieter Heimatbuch, 34:187-196.

Couton, Marjorie; Studer, Angela; Hürlemann, Samuel; Locher, Nadine; Knüsel, Mara; Alther, Roman; Altermatt, Florian (2023). Integrating citizen science and environmental DNA metabarcoding to study biodiversity of groundwater amphipods in Switzerland. Scientific Reports, 13(1):18097.

Carraro, Luca (2023). Technical note: Seamless extraction and analysis of river networks in R. Hydrology and Earth System Sciences, 27(20):3733-3742.

Boschman, Lydian M; Carraro, Luca; Cassemiro, Fernanda A S; de Vries, Jorad; Altermatt, Florian; Hagen, Oskar; Hoorn, Carina; Pellissier, Loïc (2023). Freshwater fish diversity in the western Amazon basin shaped by Andean uplift since the Late Cretaceous. Nature Ecology and Evolution, 7(12):2037-2044.

El‐Sabaawi, Rana W; Lemmen, Kimberley D; Jeyasingh, Punidan D; Declerck, Steven A J (2023). SEED: A framework for integrating ecological stoichiometry and eco‐evolutionary dynamics. Ecology Letters, 26(1):S109-S126.

Laetsch, Dominik R; Bisschop, Gertjan; Martin, Simon H; Aeschbacher, Simon; Setter, Derek; Lohse, Konrad (2023). Demographically explicit scans for barriers to gene flow using gIMble. PLoS Genetics, 19(10):e1010999.

Pedersen, Jesper Borre; Assmann, Jakob Johann; Normand, Signe; Karger, Dirk Nikolaus; Riede, Felix (2023). Climate Niche Modeling Reveals the Fate of Pioneering Late Pleistocene Populations in Northern Europe. Current Anthropology, 64(5):599-608.

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Blackman, Rosetta C; Walser, Jean‐Claude; Rüber, Lukas; Brantschen, Jeanine; Villalba, Soraya; Brodersen, Jakob; Seehausen, Ole; Altermatt, Florian (2023). General principles for assignments of communities from eDNA: Open versus closed taxonomic databases. Environmental DNA, 5(2):326-342.

Gupta, Anubhav; David Figueroa, H; O'Gorman, Eoin; Jones, Iwan; Woodward, Guy; Petchey, Owen L (2023). How many predator guts are required to predict trophic interactions? Food Webs, 34:e00269.

van Moorsel, Sofia J; Thébault, Elisa; Radchuk, Viktoriia; Narwani, Anita; Montoya, José M; Dakos, Vasilis; Holmes, Mark; De Laender, Frederik; Pennekamp, Frank (2023). Predicting effects of multiple interacting global change drivers across trophic levels. Global Change Biology, 29(5):1223-1238.

Cereghetti, Eva; Altermatt, Florian (2023). Spatiotemporal dynamics in freshwater amphipod assemblages are associated with surrounding terrestrial land use type. Ecosphere, 14(3):e4469.

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Martini, Jan; Walther, Franziska; Schenekar, Tamara; Birnstiel, Emil; Wüthrich, Remo; Oester, Rebecca; Schindelegger, Bernadette; Schwingshackl, Thea; Wilfling, Olivia; Altermatt, Florian; Talluto, Matthew V; Singer, Gabriel; Vitecek, Simon (2023). The last hideout: Abundance patterns of the not-quite-yet extinct mayfly Prosopistoma pennigerum in the Albanian Vjosa River network. Insect Conservation and Diversity, 16(2):285-297.

Jean-Richard, Peter; Schmidt, Benedikt R (2023). Amphibien besiedeln neu angelegte Weiher, aber nicht dauerhaft: Eine Fallstudie. Zeitschrift für Feldherpetologie, 30:62-76.

Wu, Rui-Jie; Kong, Yi-Xiu; Di, Zengru; Bascompte, Jordi; Shi, Gui-Yuan (2023). Rigorous Criteria for the Collapse of Nonlinear Cooperative Networks. Physical Review Letters, 130(9):097401.

Cantor, Mauricio; Farine, Damien R; Daura-Jorge, Fábio G (2023). Foraging synchrony drives resilience in human–dolphin mutualism. Proceedings of the National Academy of Sciences of the United States of America, 120(6):e2207739120.

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Shimizu-Inatsugi, Rie; Morishima, Aki; Mourato, Beatriz; Shimizu, Kentaro K; Sato, Yasuhiro (2023). Phenotypic variation of a new synthetic allotetraploid Arabidopsis. Frontiers in Plant Science, 13:1058522.

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Schano, Christian. Breeding ecology and population trend in relation to snow cover and snowmelt phenology in a high-alpine specialist, the white-winged snowfinch, Montifringilla nivalis. 2023, University of Zurich, Faculty of Science.

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Schaepman-Strub, Gabriela; Kim, Jin-Soo (2022). What set Siberia ablaze? Science, 378(6623):944-945.

Eck, Jenalle L; Kytöviita, Minna‐Maarit; Laine, Anna‐Liisa (2022). Arbuscular mycorrhizal fungi influence host infection during epidemics in a wild plant pathosystem. New Phytologist, 236(5):1922-1935.

Kim, Jin-Soo; Kug, Jong-Seong; Jeong, Sujong; Yoon, Jin-Ho; Zeng, Ning; Hong, Jinkyu; Jeong, Jee-Hoon; Zhao, Yuan; Chen, Xiaoqiu; Williams, Mathew; Ichii, Kazuhito; Schaepman-Strub, Gabriela (2022). Arctic warming-induced cold damage to East Asian terrestrial ecosystems. Communications Earth & Environment, 3(16):16-86.

Cote, Julien; Dahirel, Maxime; Schtickzelle, Nicolas; Altermatt, Florian; Ansart, Armelle; Blanchet, Simon; Chaine, Alexis S; De Laender, Frederik; De Raedt, Jonathan; Haegeman, Bart; Jacob, Staffan; Kaltz, Oliver; Laurent, Estelle; Little, Chelsea J; Madec, Luc; Manzi, Florent; Masier, Stefano; Pellerin, Felix; Pennekamp, Frank; Therry, Lieven; Vong, Alexandre; Winandy, Laurane; Bonte, Dries; Fronhofer, Emanuel A; Legrand, Delphine (2022). Dispersal syndromes in challenging environments: A cross‐species experiment. Ecology Letters, 25(12):2675-2687.

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Heim, Wieland; Piironen, Antti; Heim, Ramona Julia; Piha, Markus; Seimola, Tuomas; Forsman, Jukka T; Laaksonen, Toni (2022). Effects of multiple targeted repelling measures on the behaviour of individually tracked birds in an area of increasing human–wildlife conflict. Journal of Applied Ecology, 59(12):3027-3037.

Driscoll, Isabel; Manser, Marta; Thornton, Alex (2022). Function of meerkats' mobbing-like response to secondary predator cues: recruitment not teaching. Animal Behaviour, 194:111-126.

Sotiropoulos, Alexandros G; Arango-Isaza, Epifanía; Ban, Tomohiro; Barbieri, Chiara; Bourras, Salim; Cowger, Christina; Czembor, Paweł C; Ben-David, Roi; Dinoor, Amos; Ellwood, Simon R; Graf, Johannes; Hatta, Koichi; Helguera, Marcelo; Sánchez-Martín, Javier; McDonald, Bruce A; Morgounov, Alexey I; Müller, Marion C; Shamanin, Vladimir; Shimizu, Kentaro K; Yoshihira, Taiki; Zbinden, Helen; Keller, Beat; Wicker, Thomas (2022). Global genomic analyses of wheat powdery mildew reveal association of pathogen spread with historical human migration and trade. Nature Communications, 13(1):4315.

Wang, Daiping; Forstmeier, Wolfgang; Farine, Damien R; Maldonado-Chaparro, Adriana A; Martin, Katrin; Pei, Yifan; Alarcón-Nieto, Gustavo; Klarevas-Irby, James A; Ma, Shouwen; Aplin, Lucy M; Kempenaers, Bart (2022). Machine learning reveals cryptic dialects that explain mate choice in a songbird. Nature Communications, 13:1630.

Plekhanova, Elena; Kim, Jin-Soo; Oehri, Jacqueline; Erb, Angela; Schaaf, Crystal; Schaepman-Strub, Gabriela (2022). Mid-summer snow-free albedo across the Arctic tundra was mostly stable or increased over the past two decades. Environmental Research Letters, 17(12):124026.

Carraro, Luca; Altermatt, Florian (2022). Optimal Channel Networks accurately model ecologically-relevant geomorphological features of branching river networks. Communications Earth & Environment, 3:125.

Watson, Stuart K; Filippi, Piera; Gasparri, Luca; Falk, Nikola; Tamer, Nicole; Widmer, Paul; Manser, Marta; Glock, Hans‐Johann (2022). Optionality in animal communication: a novel framework for examining the evolution of arbitrariness. Biological Reviews of the Cambridge Philosophical Society, 97(6):2057-2075.

Lukić, Dunja; Limberger, Romana; Agatha, Sabine; Montagnes, David J S; Weisse, Thomas (2022). Thermal performance of planktonic ciliates differs between marine and freshwaters: A case study providing guidance for climate change studies. Limnology and Oceanography Letters, 7(6):520-526.

Watson, Stuart K; Lambeth, Susan P; Schapiro, Steven J (2022). Innovative multi-material tool use in the pant-hoot display of a chimpanzee. Scientific Reports, 12:20605.

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Moor, Helen; Bergamini, Ariel; Vorburger, Christoph; Holderegger, Rolf; Bühler, Christoph B; Eggert, Simone; Schmidt, Benedikt R (2022). Bending the curve: Simple but massive conservation action leads to landscape-scale recovery of amphibians. Proceedings of the National Academy of Sciences of the United States of America, 119(42):e2123070119.

Iyengar, Bharat Ravi; Wagner, Andreas (2022). Bacterial Hsp90 predominantly buffers but does not potentiate the phenotypic effects of deleterious mutations during fluorescent protein evolution. Genetics, 222(4):iyac154.

Matsumae, Hiromi; Jinbo, Utsugi; Nakazato, Takeru; Hatakeyama, Masaomi; Obayashi, Takeshi (2022). Bioinformatics linking to biodiversity and cultural research. JSBi Bioinformatics Review, 3(2):88-114.

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Karve, Shraddha; Wagner, Andreas (2022). Environmental complexity is more important than mutation in driving the evolution of latent novel traits in E. coli. Nature Communications, 13(1):5904.

Siffert, Océane; Pellet, Jérôme; Ramseier, Petra; Tobler, Ursina; Bergamini, Ariel; Schmidt, Benedikt R (2022). Where Land and Water Meet: Making Amphibian Breeding Sites Attractive for Amphibians. Diversity, 14(10):834.

Cirtwill, Alyssa R; Kaartinen, Riikka; Rasmussen, Claus; Redr, Deanne; Wirta, Helena; Olesen, Jens M; Tiusanen, Mikko; Ballantyne, Gavin; Cunnold, Helen; Stone, Graham N; Schmidt, Niels Martin; Roslin, Tomas (2022). Stable pollination service in a generalist high Arctic community despite the warming climate. Ecological Monographs, 93(1):e1551.

Farine, Damien R (2022). Collective action in birds. Current Biology, 32(20):R1140-R1144.

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Akagi, Takashi; Jung, Katharina; Masuda, Kanae; Shimizu, Kentaro K (2022). Polyploidy before and after domestication of crop species. Current Opinion in Plant Biology, 69:102255.

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van Moorsel, Sofia Julia (2022). The importance of ecotype diversity on duckweed growth with and without salt stress. Journal of Plant Ecology, 15(5):1065-1079.

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Risely, Alice; Schmid, Dominik W; Müller-Klein, Nadine; Wilhelm, Kerstin; Clutton-Brock, Tim H; Manser, Marta B; Sommer, Simone (2022). Gut microbiota individuality is contingent on temporal scale and age in wild meerkats. Proceedings of the Royal Society of London, Series B: Biological Sciences, 289(1981):20220609.

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Fišer, Cene; Borko, Špela; Delić, Teo; Kos, Anja; Premate, Ester; Zagmajster, Maja; Zakšek, Valerija; Altermatt, Florian (2022). The European Green Deal misses Europe’s subterranean biodiversity hotspots. Nature Ecology and Evolution, 6(10):1403-1404.

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Çilingir, F G; A’Bear, L; Hansen, D; Davis, L R; Bunbury, N; Ozgul, A; Croll, D; Grossen, Christine (2022). Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population. GigaScience, 11:giac090.

Wild, Sonja; Chimento, Michael; McMahon, K; Farine, Damien R; Sheldon, B C; Aplin, Lucy M (2022). Complex foraging behaviours in wild birds emerge from social learning and recombination of components. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 377(1843):20200307.

Schmidt, Benedikt R (2022). Der Einfluss der Habitatqualität auf die Dynamik von Populationen des Kammmolchs (Triturus cristatus). Zeitschrift für Feldherpetologie, 29(1):43-52.

Zeender, Valérian. Effects of Developmental Diet on the Expression and Inheritance of Fitness Traits in Drosophila melanogaster. 2022, University of Zurich, Faculty of Science.

Plekhanova, Elena. Feedbacks between Ecosystems and Climate through Plant-Light Interactions. 2022, University of Zurich, Faculty of Science.

Limberger, Romana; Daugaard, Uriah; Gupta, Anubhav; Krug, Rainer; Lemmen, Kimberley; Moorsel, Sofia van; Suleiman, Marcel; Zuppinger-Dingley, Debra; Petchey, Owen (2022). Functional diversity can facilitate the collapse of an undesirable ecosystem state. Authorea 66785786/v, University of Zurich.

Ross, Samuel R P-J; Petchey, Owen L; Sasaki, Takehiro; Armitage, David W (2022). How to measure response diversity. bioRxiv 489626, Cold Spring Harbor Laboratory.

Reyer, Heinz-Ulrich (2022). Kryptozoologie oder: Wie tot sind die Saurier? Vierteljahrsschrift der Naturforschenden Gesellschaft in Zürich, 167(2):4-7.

Weber, Sören Elliot. Resource Exchange and Partner Choice in the Plant-AMF Symbiosis. 2022, University of Zurich, Faculty of Science.

Mayor, Sarah. The Diversity-Functioning Relationship Across Scales of Space and Levels of Ecological Organisation. 2022, University of Zurich, Faculty of Science.

2021

Papkou, Andrei; Schalkowski, Rebecca; Barg, Mike-Christoph; Koepper, Svenja; Schulenburg, Hinrich (2021). Population size impacts host–pathogen coevolution. Proceedings of the Royal Society of London, Series B: Biological Sciences, 288:20212269.

Li, Feilong; Zhang, Yan; Altermatt, Florian; Zhang, Xiaowei (2021). Consideration of Multitrophic Biodiversity and Ecosystem Functions Improves Indices on River Ecological Status. Environmental Science & Technology, 55(24):16434-16444.

Kapun, Martin; Nunez, Joaquin C B; Bogaerts-Márquez, María; Murga-Moreno, Jesús; Paris, Margot; Outten, Joseph; et al (2021). Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource. Molecular Biology and Evolution, 38(12):5782-5805.

Cayuela, Hugo; Lemaître, Jean-François; Muths, Erin; McCaffery, Rebecca M; Frétey, Thierry; Le Garff, Bernard; Schmidt, Benedikt R; Grossenbacher, Kurt; Lenzi, Omar; Hossack, Blake R; Eby, Lisa A; Lambert, Brad A; Elmberg, Johan; Merilä, Juha; Gippet, Jérôme M W; Gaillard, Jean-Michel; Pilliod, David S (2021). Thermal conditions predict intraspecific variation in senescence rate in frogs and toads. Proceedings of the National Academy of Sciences of the United States of America, 118(49):e2112235118.

Schweizer, Gabriel; Wagner, Andreas (2021). Both Binding Strength and Evolutionary Accessibility Affect the Population Frequency of Transcription Factor Binding Sequences in Arabidopsis thaliana. Genome Biology and Evolution, 13(12):evab273.

Govaert, Lynn; Gilarranz, Luis J; Altermatt, Florian (2021). Competition alters species’ plastic and genetic response to environmental change. Scientific Reports, 11:23518.

Aguirre-Fernández, Gabriel; Barbieri, Chiara; Graff, Anna; Pérez de Arce, José; Moreno, Hyram; Sánchez-Villagra, Marcelo R (2021). Cultural macroevolution of musical instruments in South America. Humanities & Social Sciences Communications, 8:208.

Çilingir, F G; Hansen, Dennis; Ozgul, Arpat; Grossen, Christine (2021). Design of SNP markers for Aldabra giant tortoises using low coverage ddRAD-seq. Conservation Genetics Resources, 13(4):409-412.

Klein, Kora; Kokko, Hanna; ten Brink, Hanna (2021). Disentangling Verbal Arguments: Intralocus Sexual Conflict in Haplodiploids. The American Naturalist, 198(6):678-693.

Alther, Roman; Fronhofer, Emanuel A; Altermatt, Florian (2021). Dispersal behaviour and riverine network connectivity shape the genetic diversity of freshwater amphipod metapopulations. Molecular Ecology, 30(24):6551-6565.

Risely, Alice; Wilhelm, Kerstin; Clutton-Brock, Tim; Manser, Marta B; Sommer, Simone (2021). Diurnal oscillations in gut bacterial load and composition eclipse seasonal and lifetime dynamics in wild meerkats. Nature Communications, 12:6017.

Cozzi, Gabriele; Hollerbach, Laura; Suter, Stefan M; Reiners, Tobias E; Kunz, Florin; Tettamanti, Federico; Ozgul, Arpat (2021). Eyes, ears, or nose? Comparison of three non-invasive methods to survey wolf recolonisation. Mammalian Biology - Zeitschrift für Säugetierkunde, 101(6):881-893.

Kaya, Cengiz; Generalovic, Tomas N; Ståhls, Gunilla; Hauser, Martin; et al; Kenis, Marc; Blanckenhorn, Wolf U; Kapun, Martin; Sandrock, Christoph (2021). Global population genetic structure and demographic trajectories of the black soldier fly, Hermetia illucens. BMC Biology, 19:94.

Bradter, Ute; Ozgul, Arpat; Griesser, Michael; Layton‐Matthews, Kate; Eggers, Jeannette; Singer, Alexander; Sandercock, Brett K; Haverkamp, Paul J; Snäll, Tord (2021). Habitat suitability models based on opportunistic citizen science data: Evaluating forecasts from alternative methods versus an individual‐based model. Diversity and Distributions, 27(12):2397-2411.

Reyer, Heinz‐Ulrich (2021). Josh Van Buskirk (1959–2021). Evolution, 75(12):3228-3232.

Bond, Monica L; Lee, Derek E; Ozgul, Arpat; Farine, Damien R; König, Barbara (2021). Leaving by staying: Social dispersal in giraffes. Journal of Animal Ecology, 90(12):2755-2766.

Blackman, Rosetta C; Osathanunkul, Maslin; Brantschen, Jeanine; Di Muri, Cristina; Harper, Lynsey R; Mächler, Elvira; Hänfling, Bernd; Altermatt, Florian (2021). Mapping biodiversity hotspots of fish communities in subtropical streams through environmental DNA. Scientific Reports, 11:10375.

Kakui, Hiroyuki; Yamazaki, Misako; Shimizu, Kentaro K (2021). PRIMA: a rapid and cost-effective genotyping method to detect single-nucleotide differences using probe-induced heteroduplexes. Scientific Reports, 11(1):20741.

Maldonado-Chaparro, A A; Forstmeier, W; Farine, D R (2021). Relationship quality underpins pair bond formation and subsequent reproductive performance. Animal Behaviour, 182:43-58.

Papageorgiou, Danai; Rozen-Rechels, David; Nyaguthii, Brendah; Farine, Damien R (2021). Seasonality impacts collective movements in a wild group-living bird. Movement Ecology, 9:38.

Thompson, Patrick; Hürlemann, Samuel; Altermatt, Florian (2021). Species Interactions Limit the Predictability of Community Responses to Environmental Change. The American Naturalist, 198(6):694-705.

Winkler, Lennart; Ramm, Steven A; Lindholm, Anna K; Sutter, Andreas (2021). The baculum affects paternity success of first but not second males in house mouse sperm competition. BMC Ecology and Evolution, 21:159.

Lankheet, Imke; Vicente, Mário; Barbieri, Chiara; Schlebusch, Carina (2021). The performance of common SNP arrays in assigning African mitochondrial haplogroups. BMC Genomics, 22:43.

Rezende, Felipe; Antiqueira, Pablo A P; Petchey, Owen L; Velho, Luiz Felipe M; Rodrigues, Luzia C; Romero, Gustavo Q (2021). Trophic downgrading decreases species asynchrony and community stability regardless of climate warming. Ecology Letters, 24(12):2660-2673.

Kim, In-Won; Stuecker, Malte F; Timmermann, Axel; Zeller, Elke; Kug, Jong-Seong; Park, So-Won; Kim, Jin-Soo (2021). Tropical Indo-Pacific SST influences on vegetation variability in eastern Africa. Scientific Reports, 11(1):10462.

Blackman, Rosetta C; Altermatt, Florian; Foulquier, Arnaud; Lefébure, Tristan; Gauthier, Maïlys; Bouchez, Agnès; Stubbington, Rachel; Weigand, Alexander M; Leese, Florian; Datry, Thibault (2021). Unlocking our understanding of intermittent rivers and ephemeral streams with genomic tools. Frontiers in Ecology and the Environment, 19(10):574-583.

Takimoto, Hironori; Sato, Yasuhiro; Nagano, Atsushi J; Shimizu, Kentaro K; Kanagawa, Akihiro (2021). Using a two-stage convolutional neural network to rapidly identify tiny herbivorous beetles in the field. Ecological Informatics, 66:101466.

Runge, Jan-Niklas; König, Barbara; Lindholm, Anna K; Bendesky, Andres (2021). Parent-offspring inference in inbred populations. bioRxiv 469656, Cold Spring Harbor Laboratory.

Lham, Dechen; Cozzi, Gabriele; Sommer, Stefan; Thinley, Phuntsho; Wangchuk, Namgay; Wangchuk, Sonam; Ozgul, Arpat (2021). Modeling distribution and habitat suitability for the snow leopard in Bhutan. Frontiers in Conservation Science, 2:781085.

Harrison, Natasha D; Maag, Nino; Haverkamp, Paul J; Ganswindt, André; Manser, Marta B; Clutton‐Brock, Tim H; Ozgul, Arpat; Cozzi, Gabriele (2021). Behavioural change during dispersal and its relationship to survival and reproduction in a cooperative breeder. Journal of Animal Ecology, 90(11):2637-2650.

García‐Navas, Vicente; Sattler, Thomas; Schmid, Hans; Ozgul, Arpat (2021). Bird species co‐occurrence patterns in an alpine environment supports the stress‐gradient hypothesis. Oikos, 130(11):1905-1918.

Polanco F., Andrea; Richards, Eilísh; Flück, Benjamin; Valentini, Alice; Altermatt, Florian; Brosse, Sébastien; Walser, Jean‐Claude; Eme, David; Marques, Virginie; Manel, Stéphanie; Albouy, Camille; Dejean, Tony; Pellissier, Loïc (2021). Comparing the performance of 12S mitochondrial primers for fish environmental DNA across ecosystems. Environmental DNA, 3(6):1113-1127.

Duncan, Chris; Manser, Marta B; Clutton‐Brock, Tim (2021). Decline and fall: The causes of group failure in cooperatively breeding meerkats. Ecology and Evolution, 11(21):14459-14474.

Spence‐Jones, H C; Brehm, A M; Cram, D; Gaynor, D; Thorley, J; Manser, Marta B; Clutton‐Brock, T H (2021). Deferred benefits of dominance for natal males in a cooperative breeder, the Kalahari meerkat. Journal of Zoology, 315(3):236-245.

San Roman, Magdalena; Wagner, Andreas (2021). Diversity begets diversity during community assembly until ecological limits impose a diversity ceiling. Molecular Ecology, 30(22):5874-5887.

Jansen van Rensburg, Alexandra; Robin, Mathieu; Phillips, Barret; Van Buskirk, Josh (2021). European common frog (Rana temporaria) recolonized Switzerland from multiple glacial refugia in northern Italy via trans‐ and circum‐Alpine routes. Ecology and Evolution, 11(22):15984-15994.

Hirota, Shun K; Yasumoto, Akiko A; Nitta, Kozue; Tagane, Misa; Miki, Nozomu; Suyama, Yoshihisa; Yahara, Tetsukazu (2021). Evolutionary history of Hemerocallis in Japan inferred from chloroplast and nuclear phylogenies and levels of interspecific gene flow. Molecular Phylogenetics and Evolution, 164:107264.

Querejeta, José Ignacio; Schlaeppi, Klaus; López‐García, Álvaro; Ondoño, Sara; Prieto, Iván; van der Heijden, Marcel G A; del Mar Alguacil, María (2021). Lower relative abundance of ectomycorrhizal fungi under a warmer and drier climate is linked to enhanced soil organic matter decomposition. New Phytologist, 232(3):1399-1413.

Knauer, Anina C; Kokko, Hanna; Schiestl, Florian P (2021). Pollinator behavior and resource limitation maintain honest floral signaling. Functional Ecology, 35(11):2536-2549.

Simmons, Benno I; Blyth, Penelope S A; Blanchard, Julia L; Clegg, Tom; Delmas, Eva; Garnier, Aurélie; Griffiths, Christopher A; Jacob, Ute; Pennekamp, Frank; Petchey, Owen L; Poisot, Timothée; Webb, Thomas J; Beckerman, Andrew P (2021). Refocusing multiple stressor research around the targets and scales of ecological impacts. Nature Ecology and Evolution, 5(11):1478-1489.

Brunton‐Martin, Amy L; Gaskett, Anne C; Kokko, Hanna (2021). Resilience of haplodiploids to being exploited by sexually deceptive plants. Oikos, 130(11):2053-2063.

Gareta García, Miguel; Farine, Damien; Brachotte, Cloé; Borgeaud, Christèle; Bshary, Redouan (2021). Wild female vervet monkeys change grooming patterns and partners when freed from feeding constraints. Animal Behaviour, 181:117-136.

Dickel, Lisa; Arcese, Peter; Nietlisbach, Pirmin; Keller, Lukas F; Jensen, Henrik; Reid, Jane M (2021). ⁠Are immigrants outbred and unrelated? Testing standard assumptions in a wild metapopulation. Molecular Ecology, 30(22):5674-5686.

Reyer, Heinz-Ulrich (2021). Rendezvous der Fabelwesen: Drache, Einhorn & Co. zwischen Mythos und Wirklichkeit. Darmstadt: wbg/Theiss.

Zheng, Jia; Guo, Ning; Wagner, Andreas (2021). Mistranslation Reduces Mutation Load in Evolving Proteins through Negative Epistasis with DNA Mutations. Molecular Biology and Evolution, 38(11):4792-4804.

Environmental threats we can act upon: How to use the science-policy dialogue. Edited by: Altermatt, Florian (2021). München: Oekom Verlag.

Angelone, Samer (2021). Storyboardgraphy. Visual Studies, 36(4-5):421-425.

Kokko, Hanna (2021). The tired copepod and the definition of sexual selection: a comment on Shuker and Kvarnemo. Behavioral Ecology, 32(5):795-796.

Li, Guoliang; Wan, Xinrong; Yin, Baofa; Wei, Wanhong; Hou, Xianglei; Zhang, Xin; Batsuren, Erdenetuya; Zhao, Jidong; Huang, Shuli; Xu, Xiaoming; Liu, Jing; Song, Yiran; Ozgul, Arpat; Dickman, Christopher R; Wang, Guiming; Krebs, Charles J; Zhang, Zhibin (2021). Timing outweighs magnitude of rainfall in shaping population dynamics of a small mammal species in steppe grassland. Proceedings of the National Academy of Sciences of the United States of America, 118(42):e2023691118.

Brachet, Morgane A A; Vullioud, Philippe; Ganswindt, Andre; Manser, Marta B; Keller, Matthieu; Clutton-Brock, Tim H (2021). Parity predicts allonursing in a cooperative breeder. Journal of Mammalogy, 102(5):1365-1374.

Ng, Kevin Kit Siong; Kobayashi, Masaki J; Fawcett, Jeffrey A; Hatakeyama, Masaomi; Paape, Timothy; Ng, Chin Hong; Ang, Choon Cheng; Tnah, Lee Hong; Lee, Chai Ting; Nishiyama, Tomoaki; Sese, Jun; O'Brien, Michael J; Copetti, Dario; Isa, Mohd Noor Mat; Ong, Robert Cyril; Putra, Mahardika; Siregar, Iskandar Z; Indrioko, Sapto; Kosugi, Yoshiko; Izuno, Ayako; Isagi, Yuji; Lee, Soon Leong; Shimizu, Kentaro K (2021). The genome of Shorea leprosula (Dipterocarpaceae) highlights the ecological relevance of drought in aseasonal tropical rainforests. Communications Biology, 4:1166.

Leigh, Deborah M; Lischer, Heidi E L; Guillaume, Frédéric; Grossen, Christine; Günther, Torsten (2021). Disentangling adaptation from drift in bottlenecked and reintroduced populations of Alpine ibex. Molecular Ecology Resources, 21(7):2350-2363.

Figueiredo, Alexandre R T; Wagner, Andreas; Kümmerli, Rolf (2021). Ecology drives the evolution of diverse social strategies in Pseudomonas aeruginosa. Molecular Ecology, 30(20):5214-5228.

Pawlowski, Jan; Apothéloz‐Perret‐Gentil, Laure; Altermatt, Florian (2021). Environmental versus extra‐organismal DNA. Molecular Ecology, 30(19):4606-4607.

Govaert, Lynn; Altermatt, Florian; De Meester, Luc; Leibold, Mathew A; McPeek, Mark A; Pantel, Jelena H; Urban, Mark C (2021). Integrating fundamental processes to understand eco‐evolutionary community dynamics and patterns. Functional Ecology, 35(10):2138-2155.

Vitasse, Yann; Ursenbacher, Sylvain; Klein, Geoffrey; Bohnenstengel, Thierry; Chittaro, Yannick; Delestrade, Anne; Monnerat, Christian; Rebetez, Martine; Rixen, Christian; Strebel, Nicolas; Schmidt, Benedikt R; Wipf, Sonja; Wohlgemuth, Thomas; Yoccoz, Nigel Gilles; Lenoir, Jonathan (2021). Phenological and elevational shifts of plants, animals and fungi under climate change in the European Alps. Biological Reviews of the Cambridge Philosophical Society, 96(5):1816-1835.

Lavista Ferres, Juan M; Lee, Derek E; Nasir, Md; Chen, Yu-Chia; Bijral, Avleen S; Bercovitch, Fred B; Bond, Monica L (2021). Social connectedness and movements among communities of giraffes vary by sex and age class. Animal Behaviour, 180:315-328.

Roesch, Markus A; Hansen, Dennis M; Cole, Nik C (2021). Understanding demographic limiting factors to species recovery: Nest-site suitability and breeding ecology of Phelsuma guentheri on Round Island, Mauritius. Global Ecology and Conservation, 30:e01761.

Unglaub, Bianca; Cayuela, Hugo; Schmidt, Benedikt R; Preißler, Kathleen; Glos, Julian; Steinfartz, Sebastian (2021). Context‐dependent dispersal determines relatedness and genetic structure in a patchy amphibian population. Molecular Ecology, 30(20):5009-5028.

Schmidt, Benedikt R (2021). Konkurrenz zwischen Weibchen bei der Geburtshelferkröte. Feldherpetologisches Magazin, 16:39-40.

Ogden, Rob; Vasiljevic, Nina; Prost, Stefan (2021). Nanopore sequencing in non-human forensic genetics. Emerging Topics in Life Sciences, 5(3):465-473.

Brantschen, Jeanine; Blackman, Rosetta C; Walser, Jean-Claude; Altermatt, Florian (2021). Environmental DNA gives comparable results to morphology-based indices of macroinvertebrates in a large-scale ecological assessment. PLoS ONE, 16(9):e0257510.

Perdigon Ferreira, Jhoniel. Experimental and meta-analytic test of the role of condition in the expression of secondary sexual traits and alternative reproductive tactics in male Drosophila prolongata, and other taxa. 2021, University of Zurich, Faculty of Science.

Constable, George W A; Kokko, Hanna (2021). Parthenogenesis and the Evolution of Anisogamy. Cells, 10(9):1-28/.

Thüler, Karin; Blanckenhorn, Wolf U; Ward, Paul I; Lüpold, Stefan; Bussière, Luc F (2021). Female accessory gland fluid promotes sperm survival in yellow dung flies. Alpine Entomology, 5:95-100.

Halstead-Nussloch, Gwyneth; Tanaka, Tsuyoshi; Copetti, Dario; Paape, Timothy; Kobayashi, Fuminori; Hatakeyama, Masaomi; Kanamori, Hiroyuki; Wu, Jianzhong; Mascher, Martin; Kawaura, Kanako; Shimizu, Kentaro K; Handa, Hirokazu (2021). Multiple Wheat Genomes Reveal Novel Gli-2 Sublocus Location and Variation of Celiac Disease Epitopes in Duplicated α-Gliadin Genes. Frontiers in Plant Science, 12:715985.

Hordley, Lisbeth A; Gillings, Simon; Petchey, Owen L; Tobias, Joseph A; Oliver, Thomas H (2021). Diversity of response and effect traits provides complementary information about avian community dynamics linked to ecological function. Functional Ecology, 35(9):1938-1950.

Herbst, Christian T; Nishimura, Takeshi; Garcia, Maxime; Migimatsu, Kishin; Tokuda, Isao T (2021). Effect of Ventricular Folds on Vocalization Fundamental Frequency in Domestic Pigs (Sus scrofa domesticus). Journal of Voice, 35(5):805.e1-805.e15.

Cruickshank, Sam S; Bergamini, Ariel; Schmidt, Benedikt R (2021). Estimation of breeding probability can make monitoring data more revealing: a case study of amphibians. Ecological Applications, 31(6):e02357.

Paniw, Maria; Cozzi, Gabriele; Sommer, Stefan; Ozgul, Arpat (2021). Demographic processes in socially structured populations. In: Salguero-Gómez, Roberto; Gamelon, M. Demographic Methods across the Tree of Life. Oxford: Oxford University Press, 341-350.

Park, So-Won; Kug, Jong-Seong; Jun, Sang-Yoon; Jeong, Su-Jong; Kim, Jin-Soo (2021). Role of cloud feedback in continental warming response to CO2 physiological forcing. Journal of Climate, 34(22):8813-8828.

Pedraza, Fernando; Bascompte, Jordi (2021). The joint role of coevolutionary selection and network structure in shaping trait matching in mutualisms. Proceedings of the Royal Society of London, Series B: Biological Sciences, 288(1957):20211291.

Demont, Marco; Ward, Paul I; Blanckenhorn, Wolf U; Lüpold, Stefan; Martin, Oliver Y; Bussière, Luc F (2021). How biases in sperm storage relate to sperm use during oviposition in female yellow dung flies. Behavioral Ecology, 32(4):756-768.

Frei, Daniel; Veekman, Elisabeth; Grogg, Daniel; Stoffel-Studer, Ingrid; Morishima, Aki; Shimizu-Inatsugi, Rie; Yates, Steven; Shimizu, Kentaro K; Frey, Jürg E; Studer, Bruno; Copetti, Dario (2021). Ultralong Oxford Nanopore reads enable the development of a reference-grade perennial ryegrass genome assembly. Genome Biology and Evolution, 13(8):evab159.

Blanckenhorn, Wolf U; Berger, David; Rohner, Patrick T; Schäfer, Martin A; Akashi, Hiroshi; Walters, Richard J (2021). Comprehensive thermal performance curves for yellow dung fly life history traits and the temperature-size-rule. Journal of Thermal Biology, 100:103069.

De Nardo, Alessio N; Roy, Jeannine; Sbilordo, Sonja H; Lüpold, Stefan (2021). Condition‐dependent interaction between mating success and competitive fertilization success in Drosophila melanogaster. Evolution, 75(8):2014-2026.

Wuest, Samuel E; Peter, Roland; Niklaus, Pascal A (2021). Ecological and evolutionary approaches to improving crop variety mixtures. Nature Ecology and Evolution, 5(8):1068-1077.

Lham, D; Cozzi, G; Sommer, S; Wangchuk, S; Lham, K; Ozgul, A (2021). Ecological determinants of livestock depredation by the snow leopard Panthera uncia in Bhutan. Journal of Zoology, 314(4):275-284.

Matsumae, Hiromi; Ranacher, Peter; Savage, Patrick E; Blasi, Damián E; Currie, Thomas E; Koganebuchi, Kae; Nishida, Nao; Sato, Takehiro; Tanabe, Hideyuki; Tajima, Atsushi; Brown, Steven; Stoneking, Mark; Shimizu, Kentaro K; Oota, Hiroki; Bickel, Balthasar (2021). Exploring correlations in genetic and cultural variation across language families in northeast Asia. Science Advances, 7(34):eabd9223.

Zheng, Jia; Bratulic, Sinisa; Lischer, Heidi E L; Wagner, Andreas (2021). Mistranslation can promote the exploration of alternative evolutionary trajectories in enzyme evolution. Journal of Evolutionary Biology, 34(8):1302-1315.

Kang, Jung-Ho; Hwang, Heejin; Lee, Sang-Jin; Choi, Sung-Deuk; Kim, Jin-Soo; Hong, Sangbum; Hur, Soon Do; Baek, Je-Hyun (2021). Record of North American boreal forest fires in northwest Greenland snow. Chemosphere, 276:130187.

Li, Xiang‐Yi; Kokko, Hanna (2021). Sexual dimorphism driven by intersexual resource competition: Why is it rare, and where to look for it? Journal of Animal Ecology, 90(8):1831-1843.

Schanz, Federica R; Sommer, Stefan; Lami, Andrea; Fontaneto, Diego; Ozgul, Arpat (2021). Life‐history responses of a freshwater rotifer to copper pollution. Ecology and Evolution, 11(16):10947-10955.

Toda, Yosuke; Tameshige, Toshiaki; Tomiyama, Masakazu; Kinoshita, Toshinori; Shimizu, Kentaro K (2021). An Affordable Image-Analysis Platform to Accelerate Stomatal Phenotyping During Microscopic Observation. Frontiers in Plant Science, 12:715309.

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Brügger, Rahel K; Burkart, Judith M (2021). Parental reactions to a dying marmoset infant: conditional investment by the mother, but not the father. Behaviour, 159(1):89-109.

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Van Buskirk, Josh; Smith, David C (2021). Ecological causes of fluctuating natural selection on habitat choice in an amphibian. Evolution, 75(7):1862-1877.

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Constance, Annabelle; Haverkamp, Paul J; Bunbury, Nancy; Schaepman-Strub, Gabriela (2021). Extent change of protected mangrove forest and its relation to wave power exposure on Aldabra Atoll. Global Ecology and Conservation, 27:e01564.

Layton-Matthews, Kate; Griesser, Michael; Coste, Christophe F D; Ozgul, Arpat (2021). Forest management affects seasonal source-sink dynamics in a territorial, group-living bird. Oecologia, 196(2):399-412.

Suleiman, Marcel; Choffat, Yves; Daugaard, Uriah; Petchey, Owen L (2021). Large and interacting effects of temperature and nutrient addition on stratified microbial ecosystems in a small, replicated, and liquid-dominated Winogradsky column approach. MicrobiologyOpen, 10(3):e1189.

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Akandil, Cengiz; Meier, Patricia; Otaru, Oiza; Joshi, Jasmin (2021). Mapping Invasive Giant Goldenrod (Solidago gigantea) with Multispectral Images Acquired by Unmanned Aerial Vehicle. Journal of Digital Landscape Architecture:245-256.

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Alther, Roman; Bongni, Nicole; Borko, Špela; Fišer, Cene; Altermatt, Florian (2021). Citizen science approach reveals groundwater fauna in Switzerland and a new species of Niphargus (Amphipoda, Niphargidae). Subterranean Biology, 39:1-31.

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Vale, Gillian L; McGuigan, Nicola; Burdett, Emily; Lambeth, Susan P; Lucas, Amanda; Rawlings, Bruce; Schapiro, Steven J; Watson, Stuart K; Whiten, Andrew (2021). Why do chimpanzees have diverse behavioral repertoires yet lack more complex cultures? Invention and social information use in a cumulative task. Evolution and Human Behavior, 42(3):247-258.

Zanet, Stefania; Ferroglio, Ezio; Orlandini, Filippo; Bassano, Bruno; Battisti, Elena; Brambilla, Alice (2021). Bronchopulmonary Nematodes in Alpine Ibex: Shedding of First Stage Larvae Analyzed at the Individual Host Level. Frontiers in Veterinary Science, 8:663268.

Reuland, Charel; Simmons, Leigh W; Lüpold, Stefan; Fitzpatrick, John L (2021). Weapons evolve faster than sperm in bovids and cervids. Cells, 10(5):1062.

Heinsohn, Robert; Au, J; Kokko, Hanna; Webb, M H; Deans, Ross M; Crates, Ross; Stojanovic, Dejan (2021). Can an introduced predator select for adaptive sex allocation? Proceedings of the Royal Society of London, Series B: Biological Sciences, 288(1949):20210093.

van Moorsel, Sofia J; Marleau, Justin N; Negrín Dastis, Jorge O; Bazerghi, Charles; Fugère, Vincent; Petchey, Owen L; Gonzalez, Andrew (2021). Prior exposure to stress allows the maintenance of an ecosystem cycle following severe acidification. Oikos, 130(7):1062-1073.

Bachmann, Judith C; Van Buskirk, Josh (2021). Adaptation to elevation but limited local adaptation in an amphibian. Evolution, 75(4):956-969.

Yannic, G; Helfer, V; Sermier, R; Schmidt, B R; Fumagalli, L (2021). Fine scale genetic structure in fire salamanders (Salamandra salamandra) along a rural-to-urban gradient. Conservation Genetics, 22(2):275-292.

Shimizu-Inatsugi, Rie; Milosavljevic, Silvija; Shimizu, Kentaro K; Schaepman‐Strub, Gabriela; Tanoi, Keitaro; Sato, Yasuhiro (2021). Metal accumulation and its effect on leaf herbivory in an allopolyploid species Arabidopsis kamchatica inherited from a diploid hyperaccumulator A. halleri. Plant Species Biology, 36(2):208-217.

Wang, Jun; Wang, Meirong; Kim, Jin‐Soo; Joiner, Joanna; Zeng, Ning; Jiang, Fei; Wang, Hengmao; He, Wei; Wu, Mousong; Chen, Tiexi; Ju, Weimin; Chen, Jing M (2021). Modulation of Land Photosynthesis by the Indian Ocean Dipole: Satellite‐Based Observations and CMIP6 Future Projections. Earth's Future, 9(4):e2020EF001942.

Sato, Yasuhiro; Yamamoto, Eiji; Shimizu, Kentaro K; Nagano, Atsushi J (2021). Neighbor GWAS: incorporating neighbor genotypic identity into genome-wide association studies of field herbivory. Heredity, 126(4):597-614.

García‐Navas, Vicente; Sattler, Thomas; Schmid, Hans; Ozgul, Arpat (2021). Spatial heterogeneity in temporal dynamics of Alpine bird communities along an elevational gradient. Journal of Biogeography, 48(4):886-902.

Valenzuela‐Sánchez, Andrés; Wilber, Mark Q; Canessa, Stefano; Bacigalupe, Leonardo D; Muths, Erin; Schmidt, Benedikt R; Cunningham, Andrew A; Ozgul, Arpat; Johnson, Pieter T J; Cayuela, Hugo (2021). Why disease ecology needs life‐history theory: a host perspective. Ecology Letters, 24(4):876-890.

Wagner, Andreas (2021). Adaptive gene misregulation. Genetics, 217(3):iyaa044.

Shimizu, Kentaro K; Copetti, Dario; Okada, Moeko; Wicker, Thomas; Tameshige, Toshiaki; Hatakeyama, Masaomi; Shimizu-Inatsugi, Rie; Aquino, Catharine; et al (2021). De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium Resistance Genes in East Asian Genotypes. Plant & Cell Physiology, 62(1):8-27.

Mohanraj, Ushanandini; Jokinen, Maija; Thapa, Rajita Rayamajhi; Paloniemi, Minna; Vesikari, Timo; Lappalainen, Maija; Tarkka, Eveliina; Nora-Krūkle, Zaiga; Vilmane, Anda; Vettenranta, Kim; Mangani, Charles; Oikarinen, Sami; Fan, Yue-Mei; Ashorn, Per; Väisänen, Elina; Söderlund-Venermo, Maria (2021). Human Protoparvovirus DNA and IgG in Children and Adults with and without Respiratory or Gastrointestinal Infections. Viruses, 13(3):483.

Limberger, Romana; Fussmann, Gregor F (2021). Adaptation and competition in deteriorating environments. Proceedings of the Royal Society of London, Series B: Biological Sciences, 288(1946):20202967.

Dasmeh, Pouria; Wagner, Andreas (2021). Natural Selection on the Phase-Separation Properties of FUS during 160 My of Mammalian Evolution. Molecular Biology and Evolution, 38(3):940-951.

van Moorsel, Sofia J (2021). Born with a silver spoon: dandelion parents’ life experiences affect the lives and afterlives of their offspring. New Phytologist, 229(6):3044-3047.

Höckerstedt, Layla; Susi, Hanna; Laine, Anna‐Liisa (2021). Effect of maternal infection on progeny growth and resistance mediated by maternal genotype and nutrient availability. Journal of Ecology, 109(3):1439-1451.

Akiyama, Reiko; Sun, Jianqiang; Hatakeyama, Masaomi; Lischer, Heidi E L; Briskine, Roman V; Hay, Angela; Gan, Xiangchao; Tsiantis, Miltos; Kudoh, Hiroshi; Kanaoka, Masahiro M; Sese, Jun; Shimizu, Kentaro K; Shimizu-Inatsugi, Rie (2021). Fine‐scale empirical data on niche divergence and homeolog expression patterns in an allopolyploid and its diploid progenitor species. New Phytologist, 229(6):3587-3601.

García-Navas, Vicente; Sattler, Thomas; Schmid, Hans; Ozgul, Arpat (2021). High elevation bird communities in the Swiss Alps exhibit reduced fecundity and lifespan independently of phylogenetic effects. Biodiversity and Conservation, 30(4):991-1010.

Schrader, Julian; Craven, Dylan; Sattler, Cornelia; Cámara-Leret, Rodrigo; Moeljono, Soetjipto; Kreft, Holger (2021). Life‐history dimensions indicate non‐random assembly processes in tropical island tree communities. Ecography, 44(3):469-480.

Sapage, Manuel; Varela, Susana A M; Kokko, Hanna (2021). Social learning by mate‐choice copying increases dispersal and reduces local adaptation. Functional Ecology, 35(3):705-716.

Chevalier, Mathieu; Mod, Heidi; Broennimann, Olivier; Di Cola, Valeria; Schmid, Sarah; Niculita‐Hirzel, Hélène; Pradervand, Jean‐Nicolas; Schmidt, Benedikt R; Ursenbacher, Sylvain; Pellissier, Loïc; Guisan, Antoine (2021). Low spatial autocorrelation in mountain biodiversity data and model residuals. Ecosphere, 12(3):e03403.

Schmidt, B R (2021). Welche Faktoren beeinflussen die Wanderungen von Amphibien von einer Population zur anderen? Zeitschrift für Feldherpetologie, 28(1):1-12.

Evans, Julian C; Lindholm, Anna K; König, Barbara (2021). Long-term overlap of social and genetic structure in free-ranging house mice reveals dynamic seasonal and group size effects. Current Zoology, 67(1):59-69.

Mächler, Elvira; Salyani, Anham; Walser, Jean-Claude; Larsen, Annegret; Schaefli, Bettina; Altermatt, Florian; Ceperley, Natalie (2021). Environmental DNA simultaneously informs hydrological and biodiversity characterization of an Alpine catchment. Hydrology and Earth System Sciences Discussions, 25(2):735-753.

Bond, M L; Lee, D E; Farine, D R; Ozgul, A; König, B (2021). Sociability increases survival of adult female giraffes. Proceedings of the Royal Society of London, Series B: Biological Sciences, 288(1944):20202770.

Gerber, Nina; Auclair, Yannick; König, Barbara; Lindholm, Anna K (2021). Population Density and Temperature Influence the Return on Maternal Investment in Wild House Mice. Frontiers in Ecology and Evolution, 8:602359.

Băncilă, Raluca Ioana; Plăiaşu, Rodica; Stănescu, Florina; Schmidt, Benedikt R; Nae, Ioana; Denoël, Mathieu (2021). Food level and light conditions affect the antipredator behavior in larvae of a stream-breeding amphibian. Behavioral Ecology and Sociobiology, 75(2):36.

Reid, Jane M; Arcese, Peter; Nietlisbach, Pirmin; Wolak, Matthew E; Muff, Stefanie; Dickel, Lisa; Keller, Lukas F (2021). Immigration counter‐acts local micro‐evolution of a major fitness component: Migration‐selection balance in free‐living song sparrows. Evolution Letters, 5(1):48-60.

Kaarlejärvi, Elina; Salemaa, Maija; Tonteri, Tiina; Merilä, Päivi; Laine, Anna‐Liisa (2021). Temporal biodiversity change following disturbance varies along an environmental gradient. Global Ecology and Biogeography, 30(2):476-489.

Obrecht, Andreas; Pham-Truffert, Myriam; Spehn, Eva M; Payne, Davnah; de Bremont, Ariane; Altermatt, Florian; Fischer, Manuel; Passarello, Cristian; Moersberger, Hannah; Schelske, Oliver; Guntern, Jodok; Prescott, Graham; Geschke, Jonas (2021). Achieving the SDGs with Biodiversity. Swiss Academies Factsheet, 16(1):1-11.

Bernasconi, Marco; Šifner, František (2021). Annotated supplements to catalogues of the family Scathophagidae (Diptera) in the world, with new taxonomic data, notes on some species and new list of species. Linzer Biologische Beitraege, 52(2):1267-1306.

Obrecht, Andreas; Pham-Truffert, Myriam; Spehn, Eva; Payne, Davnah; de Bremond, Ariane; Altermatt, Florian; Fischer, Manuel; Passarello, Cristian; Moersberger, Hannah; Schelske, Oliver; Guntern, Jodok; Prescott, Graham; Geschke, Jonas (2021). Mit Biodiversiät die SDGs erreichen. Swiss Academies Factsheet, 16(1):1-11.

Evans, Julian C; Lindholm, Anna K; König, Barbara (2021). Family dynamics reveal that female house mice preferentially breed in their maternal community. bioRxiv 428775, Cold Spring Harbor Laboratory.

Wallace, Megan A; Coffman, Kelsey A; Gilbert, Clément; Ravindran, Sanjana; Albery, Gregory F; Abbott, Jessica; et al; Kapun, Martin (2021). The discovery, distribution, and diversity of DNA viruses associated with Drosophila melanogaster in Europe. Virus Evolution, 7(1):1-23.

van Schaik, Carel; Triki, Zegni; Bshary, Redouan; Heldstab, Sandra A (2021). A Farewell to the Encephalization Quotient: A New Brain Size Measure for Comparative Primate Cognition. Brain, Behavior and Evolution, 96(1):1-12.

van Moorsel, Sofia J; Hahl, Terhi; Petchey, Owen L; Ebeling, Anne; Eisenhauer, Nico; Schmid, Bernhard; Wagg, Cameron (2021). Co‐occurrence history increases ecosystem stability and resilience in experimental plant communities. Ecology, 102(1):e03205.

Grysko, Raleigh; Plekhanova, Elena; Oehri, Jacqueline; Karsanaev, Sergey V; Maximov, Trofim C; Schaepman-Strub, Gabriela (2021). Design of the tundra rainfall experiment (TRainEx) to simulate future summer precipitation scenarios. MethodsX, 8:101331.

Plekhanova, Elena; Niklaus, Pascal A; Gastellu-Etchegorry, Jean-Philippe; Schaepman-Strub, Gabriela (2021). How does leaf functional diversity affect the light environment in forest canopies? An in-silico biodiversity experiment. Ecological Modelling, 440:109394.

Carraro, Luca; Stauffer, Julian B; Altermatt, Florian (2021). How to design optimal eDNA sampling strategies for biomonitoring in river networks. Environmental DNA, 3(1):157-172.

Kokko, Hanna (2021). Late in the Game? Instructions How to Join. Trends in Ecology & Evolution, 36(1):8-9.

Bond, Monica L; Koenig, Barbara; Lee, Derek E; Ozgul, Arpat; Farine, Damien R (2021). Proximity to humans affects local social structure in a giraffe metapopulation. Journal of Animal Ecology, 90(1):212-221.

Rouka, Erasmia; Gourgoulianni, Natalia; Lüpold, Stefan; Hatzoglou, Chrissi; Gourgoulianis, Konstantinos; Blanckenhorn, Wolf U; Zarogiannis, Sotirios G (2021). The Drosophila septate junctions beyond barrier function: Review of the literature, prediction of human orthologs of the SJ‐related proteins and identification of protein domain families. Acta Physiologica, 231(1):e13527.

Rauber, Ramona; Manser, Marta B (2021). Effect of group size and experience on the ontogeny of sentinel calling behaviour in meerkats. Animal Behaviour, 171:129-138.

Aubier, Thomas G; Kokko, Hanna (2021). Balancing quality and quantity of social relationships in volatile social environments. bioRxiv 462760, Cold Spring Harbor Laboratory.

Erten, E Yagmur; Kokko, Hanna (2021). Cancer risk and sexual conflict as constraints to body size evolution. bioRxiv 425980, Cold Spring Harbor Laboratory.

Whiten, Andrew; Harrison, Rachel A; McGuigan, Nicola; Vale, Gillian L; Watson, Stuart K (2021). Collective knowledge and the dynamics of culture in chimpanzees. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 377:20200321.

Vasiljevic, Nina; Lim, Marisa; Humble, Emily; Seah, Adeline; Kratzer, Adelgunde; Morf, Nadja V; Prost, Stefan; Ogden, Rob (2021). Developmental validation of Oxford Nanopore Technology MinION sequence data and the NGSpeciesID bioinformatic pipeline for forensic genetic species identification. Forensic Science International. Genetics, 53:102493.

Norberg, Jon; Blenckner, Thorsten; Cornell, Sarah; Petchey, Owen; Hillebrand, Helmut (2021). Failures to disagree' is essential for environmental science to effectively influence policy development. Authorea 539012, University of Zurich.

Tamir, Dan (2021). Fats and Spirits: A Story of Modern Humanities’ Energy Dependence. In: Mišík, Matúš; Kujundzic, Nada. Energy Humanities : Current State and Future Directions. Cham: Springer, 37-51.

Parreno, Maria Alejandra; Petchey, Sara; Chapman, Mollie; Altermatt, Florian; Backhaus, Norman; Zemp, Anna Deplazes; Horgan, Katherine; Niklaus, Pascal; Mihaljevic, Morana; Pennekamp, Frank; Santos, Maria; Schaepman, Michael; Schmid, Bernhard; de Melo, Vanessa Weber; Dingley, Debra Zuppinger; Petchey, Owen (2021). How might everyday experiences shape biodiversity understanding? A perspective to spark new research. SocArXiv Papers bqvxp, University of Zurich.

Insektenvielfalt in der Schweiz. Edited by: Widmer, Ivo; Mühlethaler, Roland; Baur, Bruno; Gonseth, Yves; Guntern, Jodok; Klaus, Gregor; Knop, Eva; Lachat, Thibault; Moretti, Marco; Pauli, Daniela; Pellissier, Loïc; Sattler, Thomas; Altermatt, Florian (2021). Bern: Akademie der Naturwissenschaften Schweiz (SCNAT), Forum Biodiversität Schweiz.

Hall, Marcus; Tamir, Dan (2021). Mosquitopia : The Place of Pests in a Healthy World. London: Routledge.

Bardier, Cecilia; Székely, Diana; Augusto-Alves, Guilherme; Matínez-Latorraca, Nicolás; Schmidt, Benedikt R; Cruickshank, Sam S (2021). Performance of visual vs. software-assisted photo-identification in mark-recapture studies: a case study examining different life stages of the Pacific Horned Frog (Ceratophrys stolzmanni). Amphibia - Reptilia, 42(1):17-28.

Farine, Damien; Carter, Gerald (2021). Permutation tests for hypothesis testing with animal social data: problems and potential solutions. bioRxiv 232710, Cold Spring Harbor Laboratory.

Runge, Jan-Niklas; Kokko, Hanna; Lindholm, Anna K (2021). Selfish migrants: How a meiotic driver is selected to increase dispersal. bioRxiv 429134, Cold Spring Harbor Laboratory.

Haaland, Thomas R; Ebert, Dieter; Kokko, Hanna (2021). Sex differences in the strength of selection under facultative sex. bioRxiv 465271, Cold Spring Harbor Laboratory.

Gupta, Anubhav; Petchey, Owen (2021). Simultaneously estimating food web complexity and structure with uncertainty. Authorea 523132, University of Zurich.

Macartney, Erin L; Zeender, Valérian; Meena, Abhishek; De Nardo, Alessio N; Bonduriansky, Russell; Lüpold, Stefan (2021). Sperm depletion in relation to developmental nutrition and genotype in Drosophila melanogaster. Evolution, 75(11):2830-2841.

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2020

Jähnig, Sonja C; Baranov, Viktor; Altermatt, Florian; Cranston, Peter; Friedrichs‐Manthey, Martin; Geist, Juergen; He, Fengzhi; Heino, Jani; Hering, Daniel; Hölker, Franz; Jourdan, Jonas; Kalinkat, Gregor; Kiesel, Jens; Leese, Florian; Maasri, Alain; Monaghan, Michael T; Schäfer, Ralf B; Tockner, Klement; Tonkin, Jonathan D; Domisch, Sami (2020). Revisiting global trends in freshwater insect biodiversity. Wiley Interdisciplinary Reviews: Water, 8(2):e1506.

Nussberger, Beatrice; Roth, Tobias (2020). Wildkatzenmonitoring Schweiz: Verbreitung, Dichte und Hybridisierung der Wildkatze in der Schweiz. Ergebnisse der zweiten Erhebung 2018/20. Zürich: Wildtie Schweiz.

Kropp, Heather; Loranty, Michael M; Natali, Susan M; Kholodov, Alexander L; Rocha, Adrian V; Myers-Smith, Isla; et al; Schaepman-Strub, Gabriela (2020). Shallow soils are warmer under trees and tall shrubs across Arctic and Boreal ecosystems. Environmental Research Letters, 16(1):015001.

de Villemereuil, Pierre; Charmantier, Anne; Arlt, Debora; et al; Hegelbach, Johann (2020). Fluctuating optimum and temporally variable selection on breeding date in birds and mammals. Proceedings of the National Academy of Sciences of the United States of America, 117(50):31969-31978.

Wagner, Andreas (2020). Information theory can help quantify the potential of new phenotypes to originate as exaptations. Frontiers in Ecology and Evolution, 8:564071.

Walkowiak, Sean; Gao, Liangliang; Monat, Cecile; et al; Kolodziej, Markus C; Copetti, Dario; Krattinger, Simon G; Keller, Beat; Wicker, Thomas; Halstead-Nussloch, Gwyneth; Paape, Timothy; Shimizu-Inatsugi, Rie; Shimizu, Kentaro K (2020). Multiple wheat genomes reveal global variation in modern breeding. Nature, 588(7837):277-283.

Zheng, Jia; Guo, Ning; Wagner, Andreas (2020). Selection enhances protein evolvability by increasing mutational robustness and foldability. Science, 370(6521):eabb5962.

Cámara-Leret, Rodrigo; Bascompte, Jordi (2020). Language extinction triggers the loss of unique medicinal knowledge. bioRxiv 407593, Cold Spring Harbor Laboratory.

Hernandez-Valdes, Jhonatan A; van Gestel, Jordi; Kuipers, Oscar P (2020). A riboswitch gives rise to multi-generational phenotypic heterogeneity in an auxotrophic bacterium. Nature Communications, 11(1):1203.

Collins, Courtney G; Spasojevic, Marko J; Alados, Concepción L; Aronson, Emma L; Benavides, Juan C; Cannone, Nicoletta; Caviezel, Chatrina; Grau, Oriol; Guo, Hui; Kudo, Gaku; Kuhn, Nikolas J; Müllerová, Jana; Phillips, Michala L; Pombubpa, Nuttapon; Reverchon, Frédérique; Shulman, Hannah B; Stajich, Jason E; Stokes, Alexia; Weber, Sören E; Diez, Jeffrey M (2020). Belowground impacts of alpine woody encroachment are determined by plant traits, local climate, and soil conditions. Global Change Biology, 26(12):7112-7127.

Kapopoulou, Adamandia; Kapun, Martin; Pieper, Bjorn; Pavlidis, Pavlos; Wilches, Ricardo; Duchen, Pablo; Stephan, Wolfgang; Laurent, Stefan (2020). Demographic analyses of a new sample of haploid genomes from a Swedish population of Drosophila melanogaster. Scientific Reports, 10:22415.

Garcia, Maxime; Theunissen, Frédéric; Sèbe, Frédéric; Clavel, Julien; Ravignani, Andrea; Marin-Cudraz, Thibaut; Fuchs, Jérôme; Mathevon, Nicolas (2020). Evolution of communication signals and information during species radiation. Nature Communications, 11:4970.

Thomas, H J D; Bjorkman, A D; Myers-Smith, I H; et al; Rixen, C; Schaepman-Strub, Gabriela; Wipf, Sonja; Frei, E R; Little, C J; Rumpf, S B (2020). Global plant trait relationships extend to the climatic extremes of the tundra biome. Nature Communications, 11:1351.

Mod, Heidi K; Scherrer, Daniel; Di Cola, Valeria; Broennimann, Olivier; Blandenier, Quentin; Breiner, Frank T; Buri, Aline; Goudet, Jérôme; Guex, Nicolas; Lara, Enrique; Mitchell, Edward A D; Niculita‐Hirzel, Hélène; Pagni, Marco; Pellissier, Loïc; Pinto‐Figueroa, Eric; Sanders, Ian R; Schmidt, Benedikt R; Seppey, Christophe V W; Singer, David; Ursenbacher, Sylvain; Yashiro, Erika; van der Meer, Jan R; Guisan, Antoine (2020). Greater topoclimatic control of above‐ versus below‐ground communities. Global Change Biology, 26(12):6715-6728.

Opedal, Øystein H; Ovaskainen, Otso; Saastamoinen, Marjo; Laine, Anna‐Liisa; van Nouhuys, Saskya (2020). Host‐plant availability drives the spatiotemporal dynamics of interacting metapopulations across a fragmented landscape. Ecology, 101(12):e03186.

Li, Feilong; Altermatt, Florian; Yang, Jianghua; An, Shuqing; Li, Aimin; Zhang, Xiaowei (2020). Human activities' fingerprint on multitrophic biodiversity and ecosystem functions across a major river catchment in China. Global Change Biology, 26(12):6867-6879.

Sallinen, Suvi; Norberg, Anna; Susi, Hanna; Laine, Anna-Liisa (2020). Intraspecific host variation plays a key role in virus community assembly. Nature Communications, 11:5610.

Fleischer, Ramona; Risely, Alice; Hoeck, Paquita E A; Keller, Lukas F; Sommer, Simone (2020). Mechanisms governing avian phylosymbiosis: Genetic dissimilarity based on neutral and MHC regions exhibits little relationship with gut microbiome distributions of Galápagos mockingbirds. Ecology and Evolution, 10(23):13345-13354.

Urban, Matthias; Barbieri, Chiara (2020). North and South in the ancient Central Andes: Contextualizing the archaeological record with evidence from linguistics and molecular anthropology. Journal of Anthropological Archaeology, 60:101233.

Manser, Andri; König, Barbara; Lindholm, Anna K (2020). Polyandry blocks gene drive in a wild house mouse population. Nature Communications, 11:5590.

Holderegger, Rolf; Schmidt, Benedikt R; Grünig, Christoph; Meier, Robert; Csencsics, Daniela; Gassner, Martin; Rellstab, Christian; Stapfer, André (2020). Ready-to-use workflows for the implementation of genetic tools in conservation management. Conservation Genetics Resources, 12(4):691-700.

Chakravarty, Pritish; Cozzi, Gabriele; Dejnabadi, Hooman; Léziart, Pierre‐Alexandre; Manser, Marta; Ozgul, Arpat; Aminian, Kamiar (2020). Seek and learn: Automated identification of microevents in animal behaviour using envelopes of acceleration data and machine learning. Methods in Ecology and Evolution, 11(12):1639-1651.

Tabi, Andrea; Garnier, Aurélie; Pennekamp, Frank (2020). Testing multiple drivers of the temperature‐size rule with nonlinear temperature increase. Functional Ecology, 34(12):2503-2512.

Park, So-Won; Kim, Jin-Soo; Kug, Jong-Seong (2020). The intensification of Arctic warming as a result of CO2 physiological forcing. Nature Communications, 11(1):2098.

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Bond, Monica L. Dynamics of a Socially and Spatially Structured Giraffe Population in a Human-Natural Landscape. 2020, University of Zurich, Faculty of Science.

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Tsujimoto, Michiaki; Araki, Kiwako S; Honjo, Mie N; Yasugi, Masaki; Nagano, Atsushi J; Akama, Satoru; Hatakeyama, Masaomi; Shimizu-Inatsugi, Rie; Sese, Jun; Shimizu, Kentaro K; Kudoh, Hiroshi (2019). Genet assignment and population structure analysis in a clonal forest-floor herb, Cardamine leucantha, using RAD-seq. AoB Plants, 12(1):plz080.

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