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Nikolic, Sandra; Alastra, Giuseppe; Pultar, Felix; Lüthy, Lukas; Stadlinger, Bernd; Carreira, Erick M; Bugueno, Isaac Maximiliano; Mitsiadis, Thimios A (2025). Mutanobactin-D, a Streptococcus mutans Non-Ribosomal Cyclic Lipopeptide, Induces Osteogenic/Odontogenic Differentiation of Human Dental Pulp Stem Cells and Human Bone Marrow Stem Cells. International Journal of Molecular Sciences, 26(3):1144.

Svanberg, Sara; Hirth, Elisabeth; Mitsiadis, Thimios A; Dittrich, Petra S (2024). "Periodontal ligament-on-chip" as a Novel Tool for Studies on the Physiology and Pathology of Periodontal Tissues. Advanced Healthcare Materials, 13(32):e2303942.

Bugueno, Isaac Maximiliano; Alastra, Giuseppe; Balic, Anamaria; Stadlinger, Bernd; Mitsiadis, Thimios A (2024). Limited Adipogenic Differentiation Potential of Human Dental Pulp Stem Cells Compared to Human Bone Marrow Stem Cells. International Journal of Molecular Sciences, 25(20):11105.

Jerbaka, Fadi; Gribova, Varvara; Rey, Tristan; Elfaloussi, Soufian; Kawczynski, Marzena; Kharouf, Naji; Herault, Yann; Arntz, Youri; Bloch-Zupan, Agnès; Bugueno, Isaac Maximiliano (2024). Organotypic 3D Cellular Models Mimicking the Epithelio-Ectomesenchymal Bilayer During Odontogenesis. Tissue Engineering. Part A:Epub ahead of print.

Bugueno, Isaac Maximiliano; Rey, Tristan; Jimenez-Armijo, Alexandra; Kawczynski, Marzena; Kharouf, Naji; Manière, Marie-Cécile; Herault, Yann; Bloch-Zupan, Agnès; Haushalter-Laugel, Virginie (2024). Rare dentin defects: Understanding the pathophysiological mechanisms of COLXVA1 mutations. Genes & diseases, 11(5):101303.

Jiménez-Rojo, Lucia; Mitsiadis, Thimios A (2023). Kidney capsule transplantation of chemically treated embryonic murine tooth germs. STAR Protocols, 4(3):102377.

Balic, Anamaria; Perver, Dilara; Pagella, Pierfrancesco; Rehrauer, Hubert; Stadlinger, Bernd; Moor, Andreas E; Vogel, Viola; Mitsiadis, Thimios A (2023). Extracellular matrix remodelling in dental pulp tissue of carious human teeth through the prism of single-cell RNA sequencing. International Journal of Oral Science, 15(1):30.

Mitsiadis, Thimios A; Pagella, Pierfrancesco; Capellini, Terence D; Smith, Moya Meredith (2023). The Notch-mediated circuitry in the evolution and generation of new cell lineages: the tooth model. Cellular and Molecular Life Sciences, 80(7):182.

Mitsiadis, Thimios A; Pagella, Pierfrancesco; Gomes Rodrigues, Helder; Tsouknidas, Alexander; Ramenzoni, Liza L; Radtke, Freddy; Mehl, Albert; Viriot, Laurent (2023). Notch Signaling Pathway in Tooth Shape Variations throughout Evolution. Cells, 12(5):761.

Lai, Chai Foong; Shen, Juliet; Balic, Anamaria; Pagella, Pierfrancesco; Schwab, Martin E; Mitsiadis, Thimios A (2022). Nogo-A Regulates the Fate of Human Dental Pulp Stem Cells toward Osteogenic, Adipogenic, and Neurogenic Differentiation. Cells, 11(21):3415.

Guerrero, Julien; Ghayor, Chafik; Bhattacharya, Indranil; Weber, Franz E (2022). Osteoconductivity of bone substitutes with filament-based microarchitectures: Influence of directionality, filament dimension, and distance. International Journal of Bioprinting, 9(1):626.

Mitsiadis, Thimios A; Jimenez-Rojo, Lucia; Balic, Anamaria; Weber, Silvio; Saftig, Paul; Pagella, Pierfrancesco (2022). Adam10-dependent Notch signaling establishes dental epithelial cell boundaries required for enamel formation. iScience, 25(10):105154.

Mitsiadis, T A; Trubiani, O (2022). Editorial - Brothers in arms: regenerative biology and dentistry. European Cells and Materials (ECM), 43:4-5.

Juuri, Emma; Tikka, Pauli; Domanskyi, Andrii; Corfe, Ian; Morita, Wataru; Mckinnon, Peter J; Jandova, Nela; Balic, Anamaria (2022). Ptch2 is a Potential Regulator of Mesenchymal Stem Cells. Frontiers in Physiology, 13:877565.

Pagella, Pierfrancesco; Stadlinger, Bernd; Mitsiadis, Thimios A (2021). Isolation of dental pulp and periodontal cells from human teeth for single-cell RNA sequencing. STAR Protocols, 2(4):100953.

Marconi, Guya Diletta; Porcheri, Cristina; Trubiani, Oriana; Mitsiadis, Thimios A (2021). Three-Dimensional Culture Systems for Dissecting Notch Signalling in Health and Disease. International Journal of Molecular Sciences, 22(22):12473.

Porcheri, Cristina; Mitsiadis, Thimios A (2021). New Scenarios in Pharmacological Treatments of Head and Neck Squamous Cell Carcinomas. Cancers, 13(21):5515.

Pagella, Pierfrancesco; de Vargas Roditi, Laura; Stadlinger, Bernd; Moor, Andreas E; Mitsiadis, Thimios A (2021). Notch signaling in the dynamics of perivascular stem cells and their niches. Stem Cells Translational Medicine, 10(10):1433-1445.

Pagella, Pierfrancesco; de Vargas Roditi, Laura; Stadlinger, Bernd; Moor, Andreas E; Mitsiadis, Thimios A (2021). A single-cell atlas of human teeth. iScience, 24(5):102405.

Pagella, P; Cordiale, A; Marconi, G D; Trubiani, O; Rasponi, M; Mitsiadis, T A (2021). Bioengineered tooth emulation systems for regenerative and pharmacological purposes. European Cells and Materials (ECM), 41:502-516.

Pagella, Pierfrancesco; Nombela-Arrieta, César; Mitsiadis, Thimios A (2021). Distinct Expression Patterns of Cxcl12 in Mesenchymal Stem Cell Niches of Intact and Injured Rodent Teeth. International Journal of Molecular Sciences, 22(6):3024.

Pagella, Pierfrancesco; Porcheri, Cristina; Mitsiadis, Thimios A (2020). Exploiting teeth as a model to study basic features of signaling pathways. Biochemical Society Transactions, 48(6):2729-2742.

Claudinot, Stéphanie; Sakabe, Jun-Ichi; Oshima, Hideo; Gonneau, Christèle; Mitsiadis, Thimios; Littman, Daniel; Bonfanti, Paola; Martens, Geert; Nicolas, Michael; Rochat, Ariane; Barrandon, Yann (2020). Tp63-expressing adult epithelial stem cells cross lineages boundaries revealing latent hairy skin competence. Nature Communications, 11:5645.

Porcheri, Cristina; Meisel, Christian T; Mitsiadis, Thimios A (2020). Molecular and Cellular Modelling of Salivary Gland Tumors Open New Landscapes in Diagnosis and Treatment. Cancers, 12(11):3107.

Meisel, Christian T; Porcheri, Cristina; Mitsiadis, Thimios A (2020). Cancer Stem Cells, Quo Vadis? The Notch Signaling Pathway in Tumor Initiation and Progression. Cells, 9(8):1879.

Meisel, Christian T; Pagella, Pierfrancesco; Porcheri, Cristina; Mitsiadis, Thimios A (2020). Three-Dimensional Imaging and Gene Expression Analysis Upon Enzymatic Isolation of the Tongue Epithelium. Frontiers in Physiology:11:825.

Pagella, Pierfrancesco; Miran, Shayee; Neto, Estrela; Martin, Ivan; Lamghari, Meriem; Mitsiadis, Thimios A (2020). Human dental pulp stem cells exhibit enhanced properties in comparison to human bone marrow stem cells on neurites outgrowth. FASEB Journal, 34(4):5499-5511.

Pagella, Pierfrancesco; Catón, Javier; Meisel, Christian T; Mitsiadis, Thimios A (2020). Ameloblastomas Exhibit Stem Cell Potential, Possess Neurotrophic Properties, and Establish Connections with Trigeminal Neurons. Cells, 9(3):644.

Jimenez-Rojo, Lucia; Pagella, Pierfrancesco; Harada, Hidemitsu; Mitsiadis, Thimios A (2019). Dental epithelial stem cells as a source for mammary gland regeneration and milk producing cells in vivo. Cells, 8(10):E1302.

Sharir, Amnon; Marangoni, Pauline; Zilionis, Rapolas; Wan, Mian; Wald, Tomas; Hu, Jimmy K; Kawaguchi, Kyogo; Castillo-Azofeifa, David; Epstein, Leo; Harrington, Kyle; Pagella, Pierfrancesco; Mitsiadis, Thimios; Siebel, Christian W; Klein, Allon M; Klein, Ophir D (2019). A large pool of actively cycling progenitors orchestrates self-renewal and injury repair of an ectodermal appendage. Nature Cell Biology, 21(9):1102-1112.

Porcheri, Cristina; Mitsiadis, Thimios A (2019). Physiology, Pathology and Regeneration of Salivary Glands. Cells, 8(9):976.

Porcheri, Cristina; Meisel, Christian Thomas; Mitsiadis, Thimios (2019). Multifactorial Contribution of Notch Signaling in Head and Neck Squamous Cell Carcinoma. International Journal of Molecular Sciences, 20(6):1520.

Iezzi, I; Pagella, Pierfrancesco; Mattioli-Belmonte, M; Mitsiadis, T A (2019). The effects of ageing on dental pulp stem cells, the tooth longevity elixir. European Cells and Materials (ECM), 37:175-185.

Monterubbianesi, Riccardo; Bencun, Mladen; Pagella, Pierfrancesco; Woloszyk, Anna; Orsini, Giovanna; Mitsiadis, Thimios A (2019). A comparative in vitro study of the osteogenic and adipogenic potential of human dental pulp stem cells, gingival fibroblasts and foreskin fibroblasts. Scientific Reports, 9(1):1761.

Orsini, Giovanna; Putignano, Angelo; Mitsiadis, Thimios A (2019). Editorial: Advances in Craniofacial and Dental Materials Through Nanotechnology and Tissue Engineering. Frontiers in Physiology, 10:303.

Mitsiadis, Thimios A (2019). Emerging Trends and Promises in Orofacial Cancers. Frontiers in Physiology, 10:679.

Orsini, Giovanna; Pagella, Pierfrancesco; Mitsiadis, Thimios A (2018). Modern Trends in Dental Medicine: An Update for Internists. American Journal of Medicine, 131(12):1425-1430.

Orsini, Giovanna; Pagella, Pierfrancesco; Putignano, Angelo; Mitsiadis, Thimios A (2018). Novel Biological and Technological Platforms for Dental Clinical Use. Frontiers in Physiology, 9:1102.

Mitsiadis, Thimios A; Cantù, Claudio; Jimenez-Rojo, Lucia (2018). Editorial: Signaling Pathways in Developing and Pathological Tissues and Organs of the Craniofacial Complex. Frontiers in Physiology, 9:1015.

Bao, Kai; Bostanci, Nagihan; Thurnheer, Thomas; Grossmann, Jonas; Wolski, Witold E; Thay, Bernard; Belibasakis, Georgios N; Oscarsson, Jan (2018). Aggregatibacter actinomycetemcomitans H-NS promotes biofilm formation and alters protein dynamics of other species within a polymicrobial oral biofilm. npj Biofilms and Microbiomes, 4:12.

Mitsiadis, Thimios A; Pagella, Pierfrancesco; Cantù, Claudio (2017). Early determination of the periodontal domain by the wnt-antagonist Frzb/Sfrp3. Frontiers in Physiology, 8:936.

Woloszyk, Anna; Mitsiadis, Thimios A (2017). Angiogenesis within stem cell-seeded silk scaffolds cultured on the chorioallantoic membrane and visualized by 3D imaging. Current Protocols in Stem Cell Biology, 41:1F.19.1-1F.19.9.

Mitsiadis, Thimios A; Magloire, Henry; Pagella, Pierfrancesco (2017). Nerve growth factor signalling in pathology and regeneration of human teeth. Scientific Reports, 7(1):1327.

Massa, A; Perut, F; Chano, T; Woloszyk, Anna; Mitsiadis, Thimios A; Avnet, S; Baldini, N (2017). The effect of extracellular acidosis on the behaviour of mesenchymal stem cells in vitro. European Cells and Materials (ECM), 33:252-267.

Bloch, Susanne; Thurnheer, Thomas; Murakami, Yukitaka; Belibasakis, Georgios N; Schäffer, Christina (2017). Behavior of two Tannerella forsythia strains and cell surface mutants in multispecies oral biofilms. Molecular Oral Microbiology, 32(5):404-418.

Cantù, Claudio; Pagella, Pierfrancesco; Shajiei, Tania D; Zimmerli, Dario; Valenta, Tomas; Hausmann, George; Basler, Konrad; Mitsiadis, Thimios A (2017). A cytoplasmic role of Wnt/β-catenin transcriptional cofactors Bcl9, Bcl9l, and Pygopus in tooth enamel formation. Science Signaling, 10(465):eaah4598.

Tsouknidas, Alexander; Jimenez-Rojo, Lucia; Karatsis, Evangelos; Michailidis, Nikolaos; Mitsiadis, Thimios A (2017). A bio-realistic finite element model to evaluate the effect of masticatory loadings on mouse mandible-related tissues. Frontiers in Physiology, 8:273.

Heng, Boon Chin; Zhang, Chengfei; Deng, Xuliang; Xiao, Yin; Pisciotta, Alessandra; Kidwai, Fahad; Mitsiadis, Thimios A (2017). Biomedical applications of dental and oral-derived stem cells. Stem Cells International, 2017:2931054.

Zehnder, Matthias; Rechenberg, D-K; Thurnheer, T; Lüthi-Schaller, H; Belibasakis, G N (2017). FISHing for gutta-percha-adhered biofilms in purulent post-treatment apical periodontitis. Molecular Oral Microbiology, 32(3):226-235.

Natsiou, Despoina; Granchi, Zoraide; Mitsiadis, Thimios A; Jimenez-Rojo, Lucia (2017). Generation of spheres from dental epithelial stem cells. Frontiers in Physiology, 8:7.

Gartenmann, Stefanie J; Thurnheer, Thomas; Attin, Thomas; Schmidlin, Patrick R (2017). Influence of ultrasonic tip distance and orientation on biofilm removal. Clinical Oral Investigations, 21(4):1029-1036.

Hertig, Gabriel; Zehnder, Matthias; Woloszyk, Anna; Mitsiadis, Thimios A; Ivica, Anja; Weber, Franz E (2017). Iodixanol as a contrast agent in a fibrin hydrogel for endodontic applications. Frontiers in Physiology, 8:152.

Pagella, Pierfrancesco; Cantù, Claudio; Mitsiadis, Thimios A (2017). Linking dental pathologies and cancer via Wnt signalling. OncoTarget, 8(59):99213-99214.

Mitsiadis, Thimios A; Catón, Javier; Pagella, Pierfrancesco; Orsini, Giovanna; Jimenez-Rojo, Lucia (2017). Monitoring notch signaling-associated activation of stem cell niches within injured dental pulp. Frontiers in Physiology, 8:372.

Pettersson, M; Kelk, P; Belibasakis, Georgios N; Bylund, D; Molin Thorén, M; Johansson, A (2017). Titanium ions form particles that activate and execute interleukin-1β release from lipopolysaccharide-primed macrophages. Journal of Periodontal Research, 52(1):21-32.

Wegehaupt, Florian J; Lunghi, Nancy; Belibasakis, Georgios N; Attin, Thomas (2016). Influence of light-curing distance on degree of conversion and cytotoxicity of etch-and-rinse and self-etch adhesives. BMC Oral Health, 17(1):12.

Bostanci, Nagihan; Thurnheer, T; Belibasakis, G N; Curtis, M A; Kilian, M; Marsh, P D; Kinane, D F; Mombelli, A (2016). Tribute. Molecular Oral Microbiology, 31(3):205-206.

Zaruba, Markus; Rechenberg, Dan-K; Thurnheer, Thomas; Attin, Thomas; Schmidlin, Patrick R (2016). Endodontic drug delivery for root surface disinfection: a laboratory feasibility evaluation. Clinical Oral Investigations, 20(3):607-613.

Belibasakis, Georgios N; Mir-Mari, Javier; Sahrmann, Philipp; Sanz-Martin, Ignacio; Schmidlin, Patrick R; Jung, Ronald E (2016). Clinical association of Spirochaetes and Synergistetes with peri-implantitis. Clinical Oral Implants Research, 27(6):656-661.

Mitsiadis, Thimios A; Orsini, Giovanna (2016). Editorial: a new era in dentistry: stem cell-based approaches for tooth and periodontal tissue regeneration. Frontiers in Physiology, 7:357.

Mitsiadis, Thimios A; Pagella, Pierfrancesco (2016). Expression of Nerve Growth Factor (NGF), TrkA, and p75$^{NTR}$ in developing human fetal teeth. Frontiers in Physiology, 7:338.

Woloszyk, Anna; Buschmann, Johanna; Waschkies, Conny; Stadlinger, Bernd; Mitsiadis, Thimios A (2016). Human dental pulp stem cells and gingival fibroblasts seeded into silk fibroin scaffolds have the same ability in attracting vessels. Frontiers in Physiology, 7:140.

Thurnheer, Thomas; Belibasakis, Georgios N (2016). Incorporation of staphylococci into titanium-grown biofilms: an in vitro "submucosal" biofilm model for peri-implantitis. Clinical Oral Implants Research, 27(7):890-895.

Miran, Shayee; Mitsiadis, Thimios A; Pagella, Pierfrancesco (2016). Innovative dental stem cell-based research approaches: the future of dentistry. Stem Cells International, 2016:7231038.

Chiquet, Matthias; Blumer, Susan; Angelini, Manuela; Mitsiadis, Thimios A; Katsaros, Christos (2016). Mesenchymal remodeling during palatal shelf elevation revealed by extracellular matrix and F-actin expression patterns. Frontiers in Physiology, 7:392.

Thurnheer, T; Bostanci, N; Belibasakis, G N (2016). Microbial dynamics during conversion from supragingival to subgingival biofilms in an in vitro model. Molecular Oral Microbiology, 31(2):125-135.

Spina, Anna; Montella, Roberta; Liccardo, Davide; De Rosa, Alfredo; Laino, Luigi; Mitsiadis, Thimios A; La Noce, Marcella (2016). NZ-GMP approved serum improve hDPSC osteogenic commitment and increase angiogenic factor expression. Frontiers in Physiology, 7:354.

Peker Tekdal, Gözde; Bostanci, Nagihan; Belibasakis, Georgios N; Gürkan, Ali (2016). The effect of piezoelectric surgery implant osteotomy on radiological and molecular parameters of peri-implant crestal bone loss: a randomized, controlled, split-mouth trial. Clinical Oral Implants Research, 27(5):535-544.

Woloszyk, Anna; Liccardo, Davide; Mitsiadis, Thimios A (2016). Three-Dimensional imaging of the developing vasculature within stem cell-seeded scaffolds cultured in ovo. Frontiers in Physiology, 7:146.

Mandalos, Nikolaos; Rhinn, Muriel; Granchi, Zoraide; Mitsiadis, Thimios; Economides, Aris N; Dollé, Pascal; Remboutsika, Eumorphia (2015). Craniofacial development is fine tuned by Sox2. International Journal of Developmental Neuroscience, 47(Pt A):7.

Luder, Hans U (2015). Malformations of the tooth root in humans. Frontiers in Physiology, 6:307.

Belibasakis, G N; Kast, Jeannette I; Thurnheer, Thomas; Akdis, Cezmi A; Bostanci, Nagihan (2015). The expression of gingival epithelial junctions in response to subgingival biofilms. Virulence, 6(7):704-709.

Lopez, Rodrigo; Hujoel, Philippe; Belibasakis, Georgios N (2015). On putative periodontal pathogens: an epidemiological perspective. Virulence, 6(3):249-257.

Belibasakis, Georgios N; Mylonakis, Eleftherios (2015). Oral infections: clinical and biological perspectives. Virulence, 6(3):173-176.

Bostanci, Nagihan; Bao, Kai; Wahlander, Asa; Grossmann, Jonas; Thurnheer, Thomas; Belibasakis, Georgios N (2015). Secretome of gingival epithelium in response to subgingival biofilms. Molecular Oral Microbiology, 30(4):323-335.

Akcalı, Aliye; Bostanci, Nagihan; Özçaka, Özgun; Öztürk-Ceyhan, Banu; Gümüş, Pınar; Tervahartiala, Taina; Husu, Heidi; Buduneli, Nurcan; Sorsa, Timo; Belibasakis, Georgios N (2015). Elevated matrix metalloproteinase-8 in saliva and serum in polycystic ovary syndrome and association with gingival inflammation. Innate immunity, 21(6):619-625.

Charalampakis, Georgios; Belibasakis, Georgios N (2015). Microbiome of peri-implant infections: lessons from conventional, molecular and metagenomic analyses. Virulence, 6(3):183-187.

Zehnder, Matthias; Belibasakis, Georgios N (2015). On the dynamics of root canal infections - what we understand and what we don't. Virulence, 6(3):216-222.

Bao, Kai; Papadimitropoulos, Adam; Akgül, Baki; Belibasakis, Georgios N; Bostanci, Nagihan (2015). Establishment of an oral infection model resembling the periodontal pocket in a perfusion bioreactor system. Virulence, 6(3):265-273.

Mitsiadis, Thimios A; Harada, Hidemitsu (2015). Regenerated teeth: the future of tooth replacement. An update. Regenerative medicine, 10(1):5-8.

Pagella, Pierfrancesco; Miran, Shayee; Mitsiadis, Tim (2015). Analysis of developing tooth germ innervation using microfluidic co-culture devices. Journal of Visualized Experiments (Jove), (102):e53114.

Bregy, Lukas; Müggler, Annick R; Martinez-Lozano Sinues, Pablo; García-Gómez, Diego; Suter, Yannick; Belibasakis, Georgios N; Kohler, Malcolm; Schmidlin, Patrick R; Zenobi, Renato (2015). Differentiation of oral bacteria in in vitro cultures and human saliva by secondary electrospray ionization – mass spectrometry. Scientific Reports, 5:15163.

Filatova, Anna; Pagella, Pierfrancesco; Mitsiadis, Thimios A (2015). Distribution of syndecan-1 protein in developing mouse teeth. Frontiers in Physiology:5:518.

Hofer, D; Meier, A; Sener, B; Guggenheim, B; Attin, T; Schmidlin, P R (2015). In vitro evaluation of a novel biofilm remover. International Journal of Dental Hygiene, 13(4):246-253.

Orsini, Giovanna; Jimenez-Rojo, Lucia; Natsiou, Despoina; Putignano, Angelo; Mitsiadis, Thimios A (2015). In vivo administration of dental epithelial stem cells at the apical end of the mouse incisor. Frontiers in Physiology:6:112.

Thurnheer, Thomas; Belibasakis, Georgios N (2015). Integration of non-oral bacteria into in vitro oral biofilms. Virulence, 6(3):258-264.

Schmidlin, Patrick Roger; Zaruba, Markus Tobias Winfried; Filli, Tilla; Rechenberg, Dan-Krister; Thurnheer, Thomas; Attin, Thomas (2015). Intracanal antibiotic medication for sustained root surface disinfection– a laboratory evaluation. Open Dentistry Journal, 9:396-401.

Pagella, P; Neto, E; Lamghari, M; Mitsiadis, T A (2015). Investigation of orofacial stem cell niches and their innervation through microfluidic devices. European Cells and Materials (ECM), 29:213-23.

Ioannidis, Alexis; Thurnheer, Thomas; Hofer, Deborah; Sahrmann, Philipp; Guggenheim, Bernhard; Schmidlin, Patrick R (2015). Mechanical and hydrodynamic homecare devices to clean rough implant surfaces - an in vitro polyspecies biofilm study. Clinical Oral Implants Research, 26(5):523-528.

Mitsiadis, Thimios A; Woloszyk, Anna (2015). Odyssey of human dental pulp stem cells and their remarkable ability to survive in extremely adverse conditions. Frontiers in Physiology:6:99.

Gümüş, Pınar; Emingil, Gülnur; Öztürk, Veli-Özgen; Belibasakis, Georgios N; Bostanci, Nagihan (2015). Oxidative stress markers in saliva and periodontal disease status: modulation during pregnancy and postpartum. BMC Infectious Diseases, 15(261):online.

Bao, Kai; Belibasakis, Georgios N; Selevsek, Nathalie; Grossmann, Jonas; Bostanci, Nagihan (2015). Proteomic profiling of host-biofilm interactions in an oral infection model resembling the periodontal pocket. Scientific Reports, 5:15999.

Bao, Kai; Bostanci, Nagihan; Selevsek, Nathalie; Thurnheer, Thomas; Belibasakis, Georgios N (2015). Quantitative Proteomics Reveal Distinct Protein Regulations Caused by Aggregatibacter actinomycetemcomitans within Subgingival Biofilms. PLoS ONE, 10(3):e0119222.

Mitsiadis, T A; Orsini, G; Jimenez-Rojo, L (2015). Stem cell-based approaches in dentistry. European Cells and Materials (ECM), 30:248-57.

Öztürk, V Ö; Emingil, G; Osterwalder, V; Bostanci, N (2015). The actin-bundling protein L-plastin: a novel local inflammatory marker associated with periodontitis. Journal of Periodontal Research, 50(3):337-346.

Zbinden, A; Bostanci, N; Belibasakis, G N (2015). The novel species Streptococcus tigurinus and its association with oral infection. Virulence, 6(3):177-182.

Bao, Kai; Belibasakis, Georgios N; Thurnheer, Thomas; Aduse-Opoku, Joseph; Curtis, Michael A; Bostanci, Nagihan (2014). Role of Porphyromonas gingivalis gingipains in multi-species biofilm formation. BMC Microbiology, 14(1):258.

Thurnheer, Thomas; Rohrer, Elodie; Belibasakis, Georgios N; Attin, Thomas; Schmidlin, Patrick R (2014). Static biofilm removal around ultrasonic tips in vitro. Clinical Oral Investigations, 18(7):1779-1784.

Pagella, Pierfrancesco; Neto, Estrela; Jiménez-Rojo, Lucia; Lamghari, Meriem; Mitsiadis, Thimios A (2014). Microfluidics co-culture systems for studying tooth innervation. Frontiers in Physiology:5:326.

Mandalos, Nikolaos; Rhinn, Muriel; Granchi, Zoraide; Karampelas, Ioannis; Mitsiadis, Thimios; Economides, Aris N; Dollé, Pascal; Remboutsika, Eumorphia (2014). Sox2 acts as a rheostat of epithelial to mesenchymal transition during neural crest development. Frontiers in Physiology:5:345.

Zehnder, Matthias; Rechenberg, Dan-Krister; Bostanci, Nagihan; Sisman, Filiz; Attin, Thomas (2014). Comparison of vehicles to collect dentinal fluid for molecular analysis. Journal of Dentistry, 42(8):1027-1032.

Sahrmann, Philipp; Zehnder, Matthias; Mohn, Dirk; Meier, André; Imfeld, Thomas; Thurnheer, Thomas (2014). Effect of low direct current on anaerobic multispecies biofilm adhering to a titanium implant surface. Clinical Implant Dentistry and Related Research, 16(4):552-556.

Muñoz-González, Irene; Thurnheer, Thomas; Bartolomé, Begoña; Moreno-Arribas, M Victoria (2014). Red wine and oenological extracts display antimicrobial effects in an oral bacteria biofilm model. Journal of agricultural and food chemistry, 62(20):4731-4737.

Warinner, Christina; Rodrigues, João F Matias; Vyas, Rounak; Trachsel, Christian; Shved, Natallia; Grossmann, Jonas; Radini, Anita; Hancock, Y; Tito, Raul Y; Fiddyment, Sarah; Speller, Camilla; Hendy, Jessica; Charlton, Sophy; Luder, Hans Ulrich; Salazar-García, Domingo C; Eppler, Elisabeth; Seiler, Roger; Hansen, Lars H; Castruita, José Alfredo Samaniego; Barkow-Oesterreicher, Simon; Teoh, Kai Yik; Kelstrup, Christian D; Olsen, Jesper V; Nanni, Paolo; Kawai, Toshihisa; Willerslev, Eske; von Mering, Christian; Lewis, Cecil M; Collins, Matthew J; Gilbert, M Thomas P; Rühli, Frank; Cappellini, Enrico (2014). Pathogens and host immunity in the ancient human oral cavity. Nature Genetics, 46(4):336-344.

Pagella, Pierfrancesco; Jiménez-Rojo, Lucia; Mitsiadis, Thimios A (2014). Roles of innervation in developing and regenerating orofacial tissues. Cellular and Molecular Life Sciences, 71(12):2241-2251.

Schmidlin, Patrick R; English, Helen; Duncan, Warwick; Belibasakis, Georgios N; Thurnheer, Thomas (2014). Antibacterial potential of Manuka honey against three oral bacteria in vitro. Swiss Dental Journal, 124(9):922-4.

Akcalı, Aliye; Bostanci, Nagihan; Ozçaka, Ozgün; Oztürk-Ceyhan, Banu; Gümüş, Pınar; Buduneli, Nurcan; Belibasakis, Georgios N (2014). Association between Polycystic Ovary Syndrome, Oral Microbiota and Systemic Antibody Responses. PLoS ONE, 9(9):e108074.

Thurnheer, Thomas; Belibasakis, Georgios N; Bostanci, Nagihan (2014). Colonization of gingival epithelia by subgingival biofilms in vitro: role of “red complex” bacteria. Archives of Oral Biology, 59(9):977-986.

Mitsiadis, Thimios A; Filatova, Anna; Papaccio, Gianpaolo; Goldberg, Michel; About, Imad; Papagerakis, Petros (2014). Distribution of the amelogenin protein in developing, injured and carious human teeth. Frontiers in Physiology:5:477.

Khaddam, Mayssam; Huet, Eric; Vallée, Benoît; Bensidhoum, Morad; Le-Denmat, Dominique; Filatova, Anna; Jimenez-Rojo, Lucia; Ribes, Sandy; Lorenz, Georg; Morawietz, Maria; Rochefort, Gael Y; Kiesow, Andreas; Mitsiadis, Thimios A; Poliard, Anne; Petzold, Matthias; Gabison, Eric E; Menashi, Suzanne; Chaussain, Catherine (2014). EMMPRIN/CD147 deficiency disturbs ameloblast-odontoblast cross-talk and delays enamel mineralization. Bone, 66:256-266.

Bao, Kai; Akguel, Baki; Bostanci, Nagihan (2014). Establishment and Characterization of Immortalized Gingival Epithelial and Fibroblastic Cell Lines for the Development of Organotypic Cultures. Cells, Tissues, Organs, 199(4):228-237.

Willi, Martin; Belibasakis, Georgios N; Bostanci, Nagihan (2014). Expression and regulation of TREM-1 in periodontal diseases. Clinical and Experimental Immunology, 178(1):190-200.

Ronay, Valerie; Belibasakis, Georgios N; Attin, Thomas; Schmidlin, Patrick R; Bostanci, Nagihan (2014). Expression of embryonic stem cell markers and osteogenic differentiation potential in cells derived from periodontal granulation tissue. Cell Biology International, 38(2):179-186.

Zbinden, Andrea; Aras, Fatma; Zbinden, Reinhard; Mouttet, Forouhar; Schmidlin, Patrick R; Bloemberg, Guido V; Bostanci, Nagihan (2014). Frequent detection of Streptococcus tigurinus in the human oral microbial flora by a specific 16S rRNA gene real-time TaqMan PCR. BMC Microbiology, 14:231.

do Cabo Fernandes, Claudia; Rechenberg, Dan-Krister; Zehnder, Matthias; Belibasakis, Georgios N (2014). Identification of Synergistetes in endodontic infections. Microbial Pathogenesis, 73:1-6.

Belibasakis, Georgios N; Bostanci, Nagihan (2014). Inflammatory and bone remodeling responses to the cytolethal distending toxins. Cells, 3(2):236-246.

Wegehaupt, Florian J; Tauböck, Tobias T; Attin, Thomas; Belibasakis, Georgios N (2014). Influence of light-curing mode on the cytotoxicity of resin-based surface sealants. BMC Oral Health, 14:48.

Woloszyk, Anna; Holsten Dircksen, Sabrina; Bostanci, Nagihan; Müller, Ralph; Hofmann, Sandra; Mitsiadis, Thimios A (2014). Influence of the mechanical environment on the engineering of mineralised tissues using human dental pulp stem cells and silk fibroin scaffolds. PLoS ONE, 9(10):e111010.

Nissen, Lorenzo; Sgorbati, Barbara; Biavati, Bruno; Belibasakis, Georgios N (2014). Lactobacillus salivarius and Lactobacillus gasseri down-regulate Aggregatibacter actinomycetemcomitans exotoxins expression. Annals of Microbiology, 64(2):611-617.

Belibasakis, Georgios N (2014). Microbiological and immuno-pathological aspects of peri-implant diseases. Archives of Oral Biology, 59(1):66-72.

Belibasakis, Georgios N; Schmidlin, Patrick R; Sahrmann, Philipp (2014). Molecular microbiological evaluation of subgingival biofilm sampling by paper point and curette. APMIS : Acta Pathologica, Microbiologica, et Immunologica Scandinavica, 122(4):347-352.

Rechenberg, Dan-K; Bostanci, Nagihan; Zehnder, Matthias; Belibasakis, Georgios N (2014). Periapical fluid RANKL and IL-8 are differentially regulated in pulpitis and apical periodontitis. Cytokine, 69(1):116-119.

Belibasakis, Georgios N; Thurnheer, Thomas; Bostanci, Nagihan (2014). Porphyromonas gingivalis: A heartful oral pathogen? Virulence, 5(4):575-580.

Witt, Catherine Victoria Amirtham; Hirt, Thomas; Rutz, Gordian; Luder, Hans Ulrich (2014). Root malformation associated with a cervical mineralized diaphragm - a distinct form of tooth abnormality? Oral Surgery, Oral Medicine, Oral Pathology and Oral Radiology, 117(4):e311-9.

Belibasakis, Georgios N; Oztürk, Veli-Özgen; Emingil, Gulnur; Bostanci, Nagihan (2014). Soluble triggering receptor expressed on myeloid cells (sTREM)-1 in gingival crevicular fluid: Association with clinical and microbiological parameters. Journal of Periodontology, 85(1):204-210.

Waldner-Tomic, Nadine; Vanni, Rosmarie; Belibasakis, Georgios; Thurnheer, Thomas; Attin, Thomas; Schmidlin, Patrick (2014). The in Vitro Antimicrobial Efficacy of Propolis against Four Oral Pathogens: A Review. Dentistry Journal, 2(3):85-97.

Belibasakis, G N; Bao, K; Bostanci, N (2014). Transcriptional profiling of human gingival fibroblasts in response to multi-species in vitro subgingival biofilms. Molecular Oral Microbiology, 29(4):174-183.

Belibasakis, Georgios N; Thurnheer, Thomas (2014). Validation of antibiotic efficacy on in vitro subgingival biofilms. Journal of Periodontology, 85(2):343-348.

Rossetti, Valentina; Ammann, Thomas W; Thurnheer, Thomas; Bagheri, Homayoun C; Belibasakis, Georgios N (2013). Phenotypic diversity of multicellular filamentation in oral streptococci. PLoS ONE, 8(9):e76221.

Ronay, Valerie; Belibasakis, Georgios N; Schmidlin, Patrick R; Bostanci, Nagihan (2013). Infected periodontal granulation tissue contains cells expressing embryonic stem cell markers. Schweizer Monatsschrift für Zahnmedizin, 123(1):12-6.

Forsman, Cynthia L; Ng, Brandon C; Heinze, Rachel K; Kuo, Claire; Sergi, Consolato; Gopalakrishnan, Rajaram; Yee, Douglas; Graf, Daniel; Schwertfeger, Kathryn L; Petryk, Anna (2013). BMP-binding protein twisted gastrulation is required in mammary gland epithelium for normal ductal elongation and myoepithelial compartmentalization. Developmental Biology, 373(1):95-106.

Choe, Youngshik; Kozlova, Anastasiia; Graf, Daniel; Pleasure, Samuel J (2013). Bone morphogenic protein signaling is a major determinant of dentate development. Journal of Neuroscience, 33(16):6766-6775.

Graf, Daniel; Mitsiadis, Thimios A (2013). Den Geheimnissen der Zahnentwicklung auf der Spur. Swiss Medical Forum, 13(8):168-170.

Luder, Hans U; Gerth-Kahlert, Christina; Ostertag-Benzinger, Silke; Schorderet, Daniel F (2013). Dental phenotype in Jalili Syndrome due to a c.1312 dupC homozygous mutation in the CNNM4 gene. PLoS ONE, 8(10):e78529.

Mitsiadis, Thimios A (2013). Development, pathology and regeneration of dental and orofacial tissues: A molecular approach. Molecular Biology, 2(1):e107.

Belibasakis, Georgios N; Guggenheim, Bernhard; Bostanci, Nagihan (2013). Down-regulation of NLRP3 inflammasome in gingival fibroblasts by subgingival biofilms: Involvement of Porphyromonas gingivalis. Innate Immunity, 19(1):3-9.

Bostanci, N; Oztürk, V Ö; Emingil, G; Belibasakis, G N (2013). Elevated Oral and Systemic Levels of Soluble Triggering Receptor Expressed on Myeloid Cells-1 (sTREM-1) in Periodontitis. Journal of Dental Research, 92(2):161-165.

Van Waes, Hubertus; Luder, Hans Ulrich (2013). Hypophosphatämische Rachitis. Hereditäre Stoffwechselstörung und Dentinfehlbildung. Schweizer Monatsschrift für Zahnmedizin, 123(5):410-411.

Yasmin, Nighat; Bauer, Thomas; Modak, Madhura; Wagner, Karin; Schuster, Christopher; Köffel, Rene; Seyerl, Maria; Stöckl, Johannes; Elbe-Bürger, Adelheid; Graf, Daniel; Strobl, Herbert (2013). Identification of bone morphogenetic protein 7 (BMP7) as an instructive factor for human epidermal Langerhans cell differentiation. Journal of Experimental Medicine, 210(12):2597-2610.

Ammann, Thomas W; Belibasakis, Georgios N; Thurnheer, Thomas (2013). Impact of early colonizers on in vitro subgingival biofilm formation. PLoS ONE, 8(12):e83090.

Belibasakis, Georgios N; Thurnheer, Thomas; Bostanci, Nagihan (2013). Interleukin-8 responses of multi-layer gingival epithelia to subgingival biofilms: role of the “red complex” species. PLoS ONE, 8(12):e81581.

Krämer, Mark; Sahrmann, Philipp; Sener, Beatrice; Thurnheer, Thomas; Attin, Thomas; Schmidlin, Patrick R (2013). Iodine release and antibacterial effects of a wound paste combined with PVP-iodine powder and/or solution in vitro. Journal of International Dental and Medical Research, 1(1):1-7.

Bostanci, Nagihan; Ramberg, Per; Wahlander, Åsa; Grossman, Jonas; Jönsson, Daniel; Barnes, Virginia Monsul; Papapanou, Panos N (2013). Label-free quantitative proteomics reveals differentially regulated proteins in experimental gingivitis. Journal of Proteome Research, 12(2):657-678.

Sogur, Elif; Önem, Erinç; Kalfa, Melike; Emmungil, Hakan; Bostancı, Nagihan; Aksu, Kenan; Baksı, B Güniz; Keser, Gökhan; Direskeneli, Haner; Mumcu, Gonca (2013). Oral health and oral quality of life in inactive patients with familial Mediterranean fever without amyloidosis. Clinical and Experimental Rheumatology, 31(3 Suppl 77):15-19.

Schmidlin, Patrick R; Müller, Phillip; Attin, Thomas; Wieland, Marco; Hofer, Deborah; Guggenheim, Bernhard (2013). Polyspecies biofilm formation on implant surfaces with different surface characteristics. Journal of Applied Oral Science, 21(1):48-55.

Bostanci, Nagihan; Thurnheer, Thomas; Aduse-Opoku, Joseph; Curtis, Michael A; Zinkernagel, Annelies S; Belibasakis, Georgios N (2013). Porphyromonas gingivalis regulates TREM-1 in human polymorphonuclear neutrophils via its gingipains. PLoS ONE, 8(10):e75784.

Belibasakis, G N; Oztürk, V-Ö; Emingil, G; Bostanci, N (2013). Synergistetes cluster A in saliva is associated with periodontitis. Journal of Periodontal Research, 48(6):727-732.

Kouskoura, Thaleia; Kozlova, Anastasiia; Alexiou, Maria; Blumer, Susanne; Zouvelou, Vasiliki; Katsaros, Christos; Chiquet, Matthias; Mitsiadis, Thimios A; Graf, Daniel (2013). The etiology of cleft palate formation in BMP7-deficient mice. PLoS ONE, 8(3):e59463.

Belibasakis, G N; Rechenberg, D K; Zehnder, Matthias (2013). The receptor activator of NF-κB ligand-osteoprotegerin system in pulpal and periapical disease. International Endodontic Journal, 46(2):99-111.

Ammann, T W; Bostanci, N; Belibasakis, G N; Thurnheer, T (2013). Validation of a quantitative real-time PCR assay and comparison with fluorescence microscopy and selective agar plate counting for species-specific quantification of an in vitro subgingival biofilm model. Journal of Periodontal Research, 48(4):517-526.

Mitsiadis, Thimios A; Woloszyk, Anna; Jiménez-Rojo, Lucia (2012). Nanodentistry: combining nanostructured materials and stem cells for dental tissue regeneration. Nanomedicine, 7(11):1743-1753.

Ammann, Thomas W; Gmür, Rudolf; Thurnheer, Thomas (2012). Advancement of the 10-species subgingival Zurich Biofilm model by examining different nutritional conditions and defining the structure of the in vitro biofilms. BMC Microbiology, 12:227.

Belibasakis, Georgios N; Johansson, Anders (2012). Aggregatibacter actinomycetemcomitans targets NLRP3 and NLRP6 inflammasome expression in human mononuclear leukocytes. Cytokine, 59(1):124-130.

Gmür, R (2012). Bernhard Guggenheim - critical mind at the forefront of oral microbiology. Journal of Dental Research, 91(8):731-735.

Segklia, A; Seuntjens, E; Elkouris, M; Tsalavos, S; Stappers, E; Mitsiadis, T A; Huylebroeck, D; Remboutsika, E; Graf, D (2012). Bmp7 regulates the survival, proliferation, and neurogenic properties of neural progenitor cells during corticogenesis in the mouse. PLoS ONE, 7(3):e34088.

Bostanci, Nagihan; Belibasakis, Georgios N (2012). Doxycycline inhibits TREM-1 induction by Porphyromonas gingivalis. FEMS Immunology and Medical Microbiology, 66(1):37-44.

Li, Chun-Ying; Cha, Wanghee; Luder, Hans-Ulrich; Charles, Roch-Philippe; McMahon, Martin; Mitsiadis, Thimios A; Klein, Ophir D (2012). E-cadherin regulates the behavior and fate of epithelial stem cells and their progeny in the mouse incisor. Developmental Biology, 366(2):357-366.

Tanos, Tamara; Rojo, Lucia Jimenez; Echeverria, Pablo; Brisken, Cathrin (2012). ER and PR signaling nodes during mammary gland development. Breast Cancer Research, 14(4):210.

Ibarretxe, Gaskon; Aurrekoetxea, Maitane; Crende, Olatz; Badiola, Iker; Jimenez-Rojo, Lucia; Nakamura, Takashi; Yamada, Yoshihiko; Unda, Fernando (2012). Epiprofin/Sp6 regulates Wnt-BMP signaling and the establishment of cellular junctions during the bell stage of tooth development. Cell and Tissue Research, 350(1):95-107.

Schiraldi, C; Stellavato, A; D'Agostino, A; Tirino, V; d'Aquino, R; Woloszyk, A; De Rosa, A; Laino, L; Papaccio, G; Mitsiadis, T A (2012). Fighting for territories: time-lapse analysis of dental pulp and dental follicle stem cells in co-culture reveals specific migratory capabilities. European Cells and Materials (ECM), 24:426-440.

Laheij, A M G A; Kistler, J O; Belibasakis, G N; Välimaa, H; de Soet, J J (2012). Healthcare-associated viral and bacterial infections in dentistry. Journal of Oral Microbiology, 4:17659.

Catón, Javier; Mitsiadis, Thimios A; Morgan, Peter R (2012). In vitro studies on odontogenic tumors. Methods in Molecular Biology, 887:167-177.

Karlo, Christoph A; Patcas, Raphael; Kau, Thomas; Watzal, Helmut; Signorelli, Luca; Müller, Lukas; Ullrich, Oliver; Luder, Hans-Ulrich; Kellenberger, Christian J (2012). MRI of the temporo-mandibular joint: which sequence is best suited to assess the cortical bone of the mandibular condyle? A cadaveric study using micro-CT as the standard of reference. European Radiology, 22(7):1579-1585.

Bostanci, Nagihan; Belibasakis, Georgios N (2012). Porphyromonas gingivalis: an invasive and evasive opportunistic oral pathogen. FEMS Microbiology Letters, 333(1):1-9.

d'Amaro, Rocca; Scheidegger, Rolf; Blumer, Susan; Pazera, Pawel; Katsaros, Christos; Graf, Daniel; Chiquet, Matthias (2012). Putative functions of extracellular matrix glycoproteins in secondary palate morphogenesis. Frontiers in Physiology:3:377.

Suzuki, Kentaro; Adachi, Yasuha; Numata, Tomokazu; Nakada, Shoko; Yanagita, Motoko; Nakagata, Naomi; Evans, Sylvia M; Graf, Daniel; Economides, Aris; Haraguchi, Ryuma; Moon, Anne M; Yamada, Gen (2012). Reduced BMP signaling results in hindlimb fusion with lethal pelvic/urogenital organ aplasia: a new mouse model of sirenomelia. PLoS ONE, 7(9):e43453.

Luso, Sandra; Luder, Hans Ulrich (2012). Resorption pattern and radiographic diagnosis of invasive cervical resorption. Schweizer Monatsschrift für Zahnmedizin SMfZ, 122(10):914-922.

Gkantidis, Nikolaos; Blumer, Susan; Katsaros, Christos; Graf, Daniel; Chiquet, Matthias (2012). Site-specific expression of gelatinolytic activity during morphogenesis of the secondary palate in the mouse embryo. PLoS ONE, 7(10):e47762.

Jiménez-Rojo, Lucía; Granchi, Zoraide; Graf, Daniel; Mitsiadis, Thimios A (2012). Stem cell fate determination during development and regeneration of ectodermal organs. Frontiers in Physiology:3:107.

Zijnge, Vincent; Ammann, Thomas; Thurnheer, Thomas; Gmür, Rudolf (2012). Subgingival biofilm structure. Frontiers of Oral Biology, 15:1-16.

Belibasakis, Georgios N; Bostanci, Nagihan (2012). The RANKL-OPG system in clinical periodontology. Journal of Clinical Periodontology, 39(3):239-248.

Baumgartner, Angelica; Thurnheer, Thomas; Lüthi-Schaller, Helga; Gmür, Rudolf; Belibasakis, Georgios N (2012). The phylum Synergistetes in gingivitis and necrotizing ulcerative gingivitis. Journal of Medical Microbiology, 61(Pt 11):1600-1609.

Reddi, Durga; Belibasakis, Georgios N (2012). Transcriptional Profiling of Bone Marrow Stromal Cells in Response to Porphyromonas gingivalis Secreted Products. PLoS ONE, 7(8):e43899.

Müller, P; Guggenheim, B; Attin, T; Marlinghaus, E; Schmidlin, P R (2011). Potential of shock waves to remove calculus and biofilm. Clinical Oral Investigations, 15(6):959-965.

Lana-Elola, E; Tylzanowski, P; Takatalo, M; Alakurtti, K; Veistinen, L; Mitsiadis, T A; Graf, D; Rice, R; Luyten, F P; Rice, D P (2011). Noggin null allele mice exhibit a microform of holoprosencephaly. Human Molecular Genetics, 20(20):4005-4015.

Jagannathan, N; Neelakantan, P; Thiruvengadam, C; Ramani, P; Premkumar, P; Natesan, A; Herald, J S; Luder, H U (2011). Age estimation in an Indian population using pulp/tooth volume ratio of mandibular canines obtained from cone beam computed tomography. Journal of Forensic Odonto-Stomatology, 29(2):E1-E6.

De Rosa, A; Tirino, V; Paino, F; Tartaglione, A; Mitsiadis, T A; Feki, A; d'Aquino, R; Laino, L; Colacurci, N; Papaccio, G (2011). Amniotic fluid-derived mesenchymal stem cells lead to bone differentiation when cocultured with dental pulp stem cells. Tissue Engineering. Part A, 17(5-6):645-653.

Thoma, D S; Subramani, K; Weber, Franz E; Luder, H U; Hämmerle, C H F; Jung, R E (2011). Biodegradation, soft and hard tissue integration of various polyethylene glycol hydrogels: a histomorphometric study in rabbits. Clinical Oral Implants Research, 22(11):1247-1254.

Passa, O; Tsalavos, S; Belyaev, N N; Petryk, A; Potocnik, A J; Graf, D (2011). Compartmentalization of bone morphogenetic proteins and their antagonists in lymphoid progenitors and supporting microenvironments and functional implications. Immunology, 134(3):349-359.

Klinke, T; Guggenheim, B; Klimm, W; Thurnheer, T (2011). Dental caries in rats associated with Candida albicans. Caries Research, 45(2):100-106.

Mitsiadis, T A; Feki, A; Papaccio, G; Catón, J (2011). Dental pulp stem cells, niches, and notch signaling in tooth injury. Advances in Dental Research, 23(3):275-279.

Antonini, Linda G; Luder, Hans Ulrich (2011). Discoloration of teeth from tetracyclines - even today? Schweizer Monatsschrift für Zahnmedizin SMfZ, 121(5):414-431.

Knösel, M; Reus, M; Rosenberger, A; Attin, T; Ziebolz, D (2011). Durability of bleaching results achieved with 15% carbamide peroxide and 38% hydrogen peroxide in vitro. European Journal of Esthetic Dentistry, 6(3):342-356.

Bostanci, N; Saygan, B; Emingil, G; Atilla, G; Belibasakis, G N (2011). Effect of periodontal treatment on receptor activator of NF-κB ligand and osteoprotegerin levels and relative ratio in gingival crevicular fluid. Journal of Clinical Periodontology, 38(5):428-433.

Giertsen, E; Arthur, R A; Guggenheim, B (2011). Effects of Xylitol on survival of mutans Streptococci in mixed-six-species in vitro biofilms modelling supragingival plaque. Caries Research, 45(1):31-39.

Bostanci, N; Akgül, B; Tsakanika, V; Allaker, R P; Hughes, F J; McKay, I J (2011). Effects of low-dose doxycycline on cytokine secretion in human monocytes stimulated with Aggregatibacter actinomycetemcomitans. Cytokine, 56(3):656-661.

Mitsiadis, T A (2011). Everything is on the head. Frontiers in Physiology, 2:2.

Remboutsika, Eumorphia; Elkouris, Maximilianos; Iulianella, Angelo; Andoniadou, Cynthia L; Poulou, Maria; Mitsiadis, Thimios A; Trainor, Paul A; Lovell-Badge, Robin (2011). Flexibility of neural stem cells. Frontiers in Physiology, 2:16.

Caton, J; Bostanci, N; Remboutsika, E; De Bari, C; Mitsiadis, T A (2011). Future dentistry: cell therapy meets tooth and periodontal repair and regeneration. Journal of Cellular and Molecular Medicine, 15(5):1054-1065.

Belibasakis, G N; Emingil, G; Saygan, B; Turkoglu, O; Atilla, G; Bostanci, N (2011). Gene expression of transcription factor NFATc1 in periodontal diseases. APMIS: Acta Pathologica, Microbiologica et Immunologica Scandinavica, 119(3):167-172.

Mitsiadis, T A; Luder, H U (2011). Genetic basis for tooth malformations: from mice to men and back again. Clinical Genetics, 80(4):319-329.

Mangano, Carlo; Paino, Francesca; d'Aquino, Riccardo; De Rosa, Alfredo; Iezzi, Giovanna; Piattelli, Adriano; Laino, Luigi; Mitsiadis, Thimios A; Desiderio, Vincenzo; Mangano, Francesco; Papaccio, Gianpaolo; Tirino, Virginia (2011). Human dental pulp stem cells hook into biocoral scaffold forming an engineered biocomplex. PLoS ONE, 6(4):e18721.

Belibasakis, G N; Guggenheim, B (2011). Induction of prostaglandin E(2) and interleukin-6 in gingival fibroblasts by oral biofilms. FEMS Immunology and Medical Microbiology, 63(3):381-386.

Bostanci, N; Thurnheer, T; Belibasakis, G N (2011). Involvement of the TREM-1/DAP12 pathway in the innate immune responses to Porphyromonas gingivalis. Molecular Immunology, 49(1-2):387-394.

Tsalavos, S; Segklia, K; Passa, O; Petryk, A; O'Connor, M B; Graf, D (2011). Involvement of twisted gastrulation in T cell-independent plasma cell production. Journal of Immunology, 186(12):6860-6870.

Grad, I; Hibaoui, Y; Jaconi, M; Chicha, L; Bergström-Tengzelius, R; Sailani, M R; Pelte, M F; Dahoun, S; Mitsiadis, T A; Töhönen, V; Bouillaguet, S; Antonarakis, S E; Kere, J; Zucchelli, M; Hovatta, O; Feki, A (2011). NANOG priming before full reprogramming may generate germ cell tumours. European Cells and Materials, 22:258-274.

Belibasakis, G N; Meier, A; Guggenheim, B; Bostanci, N (2011). Oral biofilm challenge regulates the RANKL-OPG system in periodontal ligament and dental pulp cells. Microbial Pathogenesis, 50(1):6-11.

Quevedo, B; Giertsen, E; Zijnge, V; Lüthi-Schaller, H; Guggenheim, B; Thurnheer, T; Gmür, R (2011). Phylogenetic group- and species-specific oligonucleotide probes for single-cell detection of lactic acid bacteria in oral biofilms. BMC Microbiology, 11:14.

Belibasakis, G N; Bostanci, N; Reddi, D (2011). Porphyromonas gingivalis induces RANKL in T-cells. Inflammation, 34(2):133-138.

Reddi, D; Brown, S J; Belibasakis, G N (2011). Porphyromonas gingivalis induces RANKL in bone marrow stromal cells: involvement of the p38 MAPK. Microbial Pathogenesis, 51(6):415-420.

Rechenberg, D K; Thurnheer, T; Zehnder, Matthias (2011). Potential systematic error in laboratory experiments on microbial leakage through filled root canals: an experimental study. International Endodontic Journal, 44(9):827-835.

Mitsiadis, T A; Papagerakis, P (2011). Regenerated teeth: the future of tooth replacement? Regenerative Medicine, 6(2):135-139.

Bostanci, N; Meier, A; Guggenheim, B; Belibasakis, G N (2011). Regulation of NLRP3 and AIM2 inflammasome gene expression levels in gingival fibroblasts by oral biofilms. Cellular Immunology, 270(1):88-93.

Belibasakis, G N; Meier, A; Guggenheim, B; Bostanci, N (2011). The RANKL-OPG system is differentially regulated by supragingival and subgingival biofilm supernatants. Cytokine, 55(1):98-103.

Kouskoura, T; Fragou, N; Alexiou, M; John, N; Sommer, L; Graf, D; Katsaros, C; Mitsiadis, T A (2011). The genetic basis of craniofacial and dental abnormalities. Schweizer Monatsschrift für Zahnmedizin SMfZ, 121(7-8):636-646.

Guggenheim, M; Thurnheer, T; Gmür, R; Giovanoli, P; Guggenheim, B (2011). Validation of the Zürich burn-biofilm model. Burns, 37(7):1125-1133.

Mitsiadis, T A; Graf, D; Luder, Hansueli; Gridley, T; Bluteau, G (2010). BMPs and FGFs target Notch signalling via jagged 2 to regulate tooth morphogenesis and cytodifferentiation. Development, 137(18):3025-3035.

Banu, L D; Conrads, G; Rehrauer, H; Hussain, H; Allan, E; van der Ploeg, J R (2010). The Streptococcus mutans serine/threonine kinase, PknB, regulates competence development, bacteriocin production, and cell wall metabolism. Infection and Immunity, 78(5):2209-2220.

Tsuji, K; Cox, K; Gamer, L; Graf, D (2010). Conditional deletion of BMP7 from the limb skeleton does not affect bone formation or fracture repair. Journal of Orthopaedic Research, 28(3):384-389.

Wagner, D O; Sieber, C; Bhushan, R; Graf, D (2010). BMPs: from bone to body morphogenetic proteins. Science Signaling, 3(107):mr 1.

Zijnge, V; van Leeuwen, M B M; Degener, J E; Abbas, F; Thurnheer, T; Gmür, R; Harmsen, H J M (2010). Oral biofilm architecture on natural teeth. PLoS ONE, 5(2):e9321.

Yamazaki, T; Goya, I; Graf, D; Martin-Orozco, N; Dong, C (2010). A butyrophilin family member critically inhibits T cell activation. Journal of Immunology, 185(10):5907-5914.

Bostanci, N; Heywood, W; Mills, K; Parkar, M; Nibali, L; Donos, N (2010). Application of label-free absolute quantitative proteomics in human gingival crevicular fluid by LC/MS E (gingival exudatome). Journal of Proteome Research, 9(5):2191-2199.

Chirasani, S R; Sternjak, A; Wend, P; Momma, S; Campos, B; Herrmann, I M; Graf, D; Mitsiadis, T A; Herold-Mende, C; Besser, D; Synowitz, M; Kettenmann, H; Glass, R (2010). Bone morphogenetic protein-7 release from endogenous neural precursor cells suppresses the tumourigenicity of stem-like glioblastoma cells. Brain: a Journal of Neurology, 133(7):1961-1972.

Spath, L; Rotilio, V; Alessandrini, M; Gambara, G; De Angelis, L; Mancini, M; Mitsiadis, T A; Vivarelli, E; Naro, F; Filippini, A; Papaccio, G (2010). Explant-derived human dental pulp stem cells enhance differentiation and proliferation potentials. Journal of Cellular and Molecular Medicine, 14(6b):1634-1644.

Akgül, B; Bostanci, N; Westphal, K; Nindl, I; Navsaria, H; Storey, A; Pfister, H (2010). Human papillomavirus 5 and 8 E6 downregulate interleukin-8 secretion in primary human keratinocytes. Journal of General Virology, 91(4):888-892.

Guggenheim, B; Weiss, M (2010). Praxisgerechte Wiederaufbereitung und Validierung von Aufbereitungsprozessen. Schweizer Monatsschrift für Zahnmedizin SMfZ, 120(5):446-449.

Wolff, A; Koch, M J; Benzinger, S; van Waes, H; Wolf, N I; Boltshauser, E; Luder, H U (2010). Rare dental peculiarities associated with the hypomyelinating leukoencephalopathy 4H syndrome/ADDH. Pediatric Dentistry, 32(5):386-392.

Belibasakis, G N; Bostanci, N; Reddi, D (2010). Regulation of protease-activated receptor-2 expression in gingival fibroblasts and Jurkat T cells by Porphyromonas gingivalis. Cell Biology International, 34(3):287-292.

Suci, P; Kang, S; Gmür, R; Douglas, T; Young, M (2010). Targeted delivery of a photosensitizer to Aggregatibacter actinomycetemcomitans biofilm. Antimicrobial Agents and Chemotherapy, 54(6):2489-2496.

Lüthi, M; Besic Gyenge, E; Engstrüm, M; Bredell, M; Grätz, Klaus; Walt, H; Gmür, R; Maake, C (2009). Hypericin- and mTHPC-mediated photodynamic therapy for the treatment of cariogenic bacteria. Medical Laser Application, 24(4):227-236.

Suzuki, K; Economides, A; Yanagita, M; Graf, D; Yamada, G (2009). New horizons at the caudal embryos: coordinated urogenital/reproductive organ formation by growth factor signaling. Current Opinion in Genetics & Development, 19(5):491-496.

Mitsiadis, T A; Graf, D (2009). Cell fate determination during tooth development and regeneration. Birth Defects Research. Part C, 87(3):199-211.

Karystinou, A; Dell'Accio, F; Kurth, Tobias B A; Wackerhage, H; Khan, I M; Archer, C W; Jones, E A; Mitsiadis, T A; De Bari, C (2009). Distinct mesenchymal progenitor cell subsets in the adult human synovium. Rheumatology, 48(9):1057-1064.

Bostanci, N; Emingil, G; Saygan, B; Turkoglu, O; Atilla, G; Curtis, M A; Belibasakis, G N (2009). Expression and regulation of the NALP3 inflammasome complex in periodontal diseases. Clinical and Experimental Immunology, 157(3):415-422.

Diep, L; Matalova, E; Mitsiadis, T A; Tucker, A S (2009). Contribution of the tooth bud mesenchyme to alveolar bone. Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution, 312B(5):510-517.

Zouvelou, V; Luder, H U; Mitsiadis, T A; Graf, D (2009). Deletion of BMP7 affects the development of bones, teeth, and other ectodermal appendages of the orofacial complex. Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution, 312B(4):361-374.

van der Ploeg, J R (2009). Analysis of CRISPR in Streptococcus mutans suggests frequent occurrence of acquired immunity against infection by M102-like bacteriophages. Microbiology, 155(Pt 6):1966-1976.

Shibata, Yukie; Yamashita, Yoshihisa; van der Ploeg, Jan R (2009). The serotype-specific glucose side chain of rhamnose–glucose polysaccharides is essential for adsorption of bacteriophage M102 to Streptococcus mutans. FEMS Microbiology Letters, 294(1):68-73.

Liu, X; Alexiou, M; Martin-Orozco, N; Chung, Y; Nurieva, R I; Ma, L; Tian, Q; Kollias, G; Lu, S; Graf, D; Dong, C (2009). Cutting edge: A critical role of B and T lymphocyte attenuator in peripheral T cell tolerance induction. Journal of Immunology, 182(8):4516-4520.

Catón, J; Luder, H U; Zoupa, M; Bradman, M; Bluteau, G; Tucker, A S; Klein, O; Mitsiadis, T A (2009). Enamel-free teeth: Tbx1 deletion affects amelogenesis in rodent incisors. Developmental Biology, 328(2):493-505.

Bostanci, N; Reddi, D; Rangarajan, M; Curtis, M A; Belibasakis, G N (2009). Porphyromonas gingivalis stimulates TACE production by T cells. Oral Microbiology and Immunology, 24(2):146-151.

Zehnder, Matthias; Guggenheim, B (2009). The mysterious appearance of enterococci in filled root canals. International Endodontic Journal, 42(4):277-287.

MacKenzie, B; Wolff, R; Lowe, N; Billington Jr, C J; Peterson, A; Schmidt, B; Graf, D; Mina, M; Gopalakrishnan, R; Petryk, A (2009). Twisted gastrulation limits apoptosis in the distal region of the mandibular arch in mice. Developmental Biology, 328(1):13-23.

Dezelic, T; Guggenheim, B; Schmidlin, P R (2009). Multi-species biofilm formation on dental materials and an adhesive patch. Oral Health & Preventive Dentistry, 7(1):47-53.

Shibata, Y; van der Ploeg, J R; Kozuki, T; Shirai, Y; Saito, N; Kawada-Matsuo, M; Takeshita, T; Yamashita, Y (2009). Kinase activity of the dgk gene product is involved in the virulence of Streptococcus mutans. Microbiology, 155(2):557-565.

Hamedi, M; Belibasakis, G N; Cruchley, A T; Rangarajan, M; Curtis, M A; Bostanci, N (2009). Porphyromonas gingivalis culture supernatants differentially regulate interleukin-1beta and interleukin-18 in human monocytic cells. Cytokine, 45(2):99-104.

Echanove, P; Mitsiadis, T A (2009). An interview with Professor Ed Kollar. Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution, 310B(5):389-398.

Smith, M M; Fraser, G J; Mitsiadis, T A (2009). Dental lamina as source of odontogenic stem cells: evolutionary origins and developmental control of tooth generation in gnathostomes. Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution, 312B(4):260-280.

Pirttiniemi, P; Peltomäki, T; Müller, L; Luder, H U (2009). Abnormal mandibular growth and the condylar cartilage. European Journal of Orthodontics, 31(1):1-11.

Zouvelou, V; Passa, O; Segklia, K; Tsalavos, S; Valenzuela, D M; Economides, A N; Graf, D (2009). Generation and functional characterization of mice with a conditional BMP7 allele. International Journal of Developmental Biology, 53(4):597-603.

Guggenheim, B; Gmür, R; Galicia, J C; Stathopoulou, P G; Benakanakere, M R; Meier, A; Thurnheer, T; Kinane, D F (2009). In vitro modeling of host-parasite interactions: the 'subgingival' biofilm challenge of primary human epithelial cells. BMC Microbiology, 9:280.

Mitsiadis, T A (2009). Old concepts, current knowledge, new challenges. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 312B(4):247-248.

Gruenbaum-Cohen, Y; Tucker, A S; Haze, A; Shilo, D; Taylor, A L; Shay, B; Sharpe, P T; Mitsiadis, T A; Ornoy, A; Blumenfeld, A; Deutsch, D (2008). Amelogenin in cranio-facial development: the tooth as a model to study the role of amelogenin during embryogenesis. Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution, 312B(5):445-457.

Nair, P N R; Brundin, M; Sundqvist, G; Sjögren, U (2008). Building biofilms in vital host tissues: a survival strategy of Actinomyces radicidentis. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology, and Endodontology, 106(4):595-603.

Mitsiadis, T A; Tucker, A S; De Bari, C; Cobourne, M T; Rice, D P C (2008). A regulatory relationship between Tbx1 and FGF signaling during tooth morphogenesis and ameloblast lineage determination. Developmental Biology, 320(1):39-48.

Nair, P N R; Sundqvist, G; Sjögren, U (2008). Experimental evidence supports the abscess theory of development of radicular cysts. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology, and Endodontology, 106(2):294-303.

Mitsiadis, T A; Caton, J; De Bari, C; Bluteau, G (2008). The large functional spectrum of the heparin-binding cytokines MK and HB-GAM in continuously growing organs: the rodent incisor as a model. Developmental Biology, 320(1):256-266.

Schlafer, S; Nordhoff, M; Wyss, C; Strub, S; Hübner, J; Gescher, D M; Petrich, A; Göbel, U B; Moter, A (2008). Involvement of Guggenheimella bovis in digital dermatitis lesions of dairy cows. Veterinary Microbiology, 128(1-2):118-125.

Nair, P N R; Duncan, H F; Pitt Ford, T R; Luder, H U (2008). Histological, ultrastructural and quantitative investigations on the response of healthy human pulps to experimental capping with mineral trioxide aggregate: a randomized controlled trial. International Endodontic Journal, 41(2):128-150.

De Bari, C; Dell'Accio, F; Karystinou, A; Guillot, P V; Fisk, N M; Jones, E A; McGonagle, D; Khan, I M; Archer, C W; Mitsiadis, T A; Donaldson, A N; Luyten, F P; Pitzalis, C (2008). A biomarker-based mathematical model to predict bone-forming potency of human synovial and periosteal mesenchymal stem cells. Arthritis and Rheumatism, 58(1):240-250.

Mitsiadis, T A; Drouin, J (2008). Deletion of the Pitx1 genomic locus affects mandibular tooth morphogenesis and expression of the Barx1 and Tbx1 genes. Developmental Biology, 313(2):887-896.

Nair, P N R (2008). Strength of evidence in current endodontic microbial research. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology, and Endodontology, 105(1):8-10.

Mitsiadis, T A; De Bari, C; About, I (2008). Apoptosis in developmental and repair-related human tooth remodeling: a view from the inside. Experimental Cell Research, 314(4):869-877.

Thurnheer, T; Giertsen, E; Gmür, R; Guggenheim, B (2008). Cariogenicity of soluble starch in oral in vitro biofilm and experimental rat caries studies: a comparison. Journal of Applied Microbiology, 105(3):829-836.

van der Ploeg, J R (2008). Characterization of Streptococcus gordonii prophage PH15: complete genome sequence and functional analysis of phage-encoded integrase and endolysin. Microbiology, 154(Pt 10):2970-2978.

Wright, J T; Hong, S P; Simmons, D; Daly, B; Uebelhart, D; Luder, H U (2008). DLX3 c.561_562delCT mutation causes attenuated phenotype of tricho-dento-osseous syndrome. American Journal of Medical Genetics. Part A, 146(3):343-349.

Bluteau, G; Luder, H U; De Bari, C; Mitsiadis, T A (2008). Stem cells for tooth engineering. European Cells and Materials, 16:1-9.

Züger, J; Lüthi-Schaller, H; Gmür, R (2007). Uncultivated Tannerella BU045 and BU063 are slim segmented filamentous rods of high prevalence but low abundance in inflammatory disease-associated dental plaques. Microbiology, 153(11):3809-3816.

van der Ploeg, J R (2007). Genome sequence of Streptococcus mutans bacteriophage M102. FEMS Microbiology Letters, 275(1):130-138.

Strub, Sarah; van der Ploeg, Jan R; Nuss, Karl; Wyss, Chris; Luginbühl, Andreas; Steiner, Adrian (2007). Quantitation of Guggenheimella bovis and treponemes in bovine tissues related to digital dermatitis. FEMS Microbiology Letters, 269(1):48-53.

Gmür, R; Lüthi-Schaller, H (2007). A combined immunofluorescence and fluorescent in situ hybridization assay for single cell analyses of dental plaque microorganisms. Journal of Microbiological Methods, 69(2):402-405.

Gmür, R; Giertsen, E; van der Veen, M H; de Josselin de Jong, E; ten Cate, J M; Guggenheim, B (2006). In vitro quantitative light-induced fluorescence to measure changes in enamel mineralization. Clinical Oral Investigations, 10(3):187-195.

Moter, A; Riep, B; Haban, V; Heuner, K; Siebert, G; Berning, M; Wyss, C; Ehmke, B; Flemmig, T F; Göbel, U B (2006). Molecular epidemiology of oral treponemes in patients with periodontitis and in periodontitis-resistant subjects. Journal of Clinical Microbiology, 44(9):3078-3085.

Nair, P N R; Luder, H U; Maspero, F A; Fischer, J H; Schug, J (2006). Biocompatibility of Beta-tricalcium phosphate root replicas in porcine tooth extraction sockets - a correlative histological, ultrastructural, and x-ray microanalytical pilot study. Journal of Biomaterials Applications, 20(4):307-324.

Nair, P N R (2006). On the causes of persistent apical periodontitis: a review. International Endodontic Journal, 39(4):249-281.

Gmür, R; Munson, M A; Wade, W G (2006). Genotypic and phenotypic characterization of fusobacteria from Chinese and European patients with inflammatory periodontal diseases. Systematic and Applied Microbiology, 29(2):120-130.

Marcotte, H; Kõll-Klais, P; Hultberg, A; Zhao, Y; Gmür, R; Mändar, R; Mikelsaar, M; Hammarström, L (2006). Expression of single-chain antibody against RgpA protease of Porphyromonas gingivalis in Lactobacillus. Journal of Applied Microbiology, 100(2):256-263.

Thurnheer, T; van der Ploeg, J R; Giertsen, E; Guggenheim, B (2006). Effects of Streptococcus mutans gtfC deficiency on mixed oral biofilms in vitro. Caries Research, 40(2):163-171.

Verma, D K; Nair, P N R; Luder, H U (2005). Quantitative histological and ultrastructural features of opercula of normally erupting human teeth. Microscopy Research and Technique, 67(6):279-285.

van der Ploeg, J R (2005). Regulation of bacteriocin production in Streptococcus mutans by the quorum-sensing system required for development of genetic competence. Journal of Bacteriology, 187(12):3980-3989.

Nair, P N R; Henry, S; Cano, V; Vera, J (2005). Microbial status of apical root canal system of human mandibular first molars with primary apical periodontitis after "one-visit" endodontic treatment. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology and Endodontology, 99(2):231-252.

Verma, D K; Nair, P N R; Luder, H U (2005). Quantitative histological features and ultrastructure of opercula of human teeth showing normal and delayed eruption. Journal of Oral Pathology & Medicine, 34(2):109-115.

Nair, P N R; Baltensperger, M M; Luder, H U; Eyrich, G K H (2005). Observations on pulpal response to carbon dioxide laser drilling of dentine in healthy human third molars. Lasers in Medical Science, 19(4):240-247.

van der Ploeg, J R; Guggenheim, B (2004). Deletion of gtfC of Streptococcus mutans has no influence on the composition of a mixed-species in vitro biofilm model of supragingival plaque. European Journal of Oral Sciences, 112(5):433-438.

Kamma, J J; Nakou, M; Gmür, R; Baehni, P C (2004). Microbiological profile of early onset/aggressive periodontitis patients. Molecular Oral Microbiology, 19(5):314-321.

Wyss, C; Moter, A; Choi, B K; Dewhirst, F E; Xue, Y; Schüpbach, P; Göbel, U B; Paster, B J; Guggenheim, B (2004). Treponema putidum sp. nov., a medium-sized proteolytic spirochaete isolated from lesions of human periodontitis and acute necrotizing ulcerative gingivitis. International Journal of Systematic and Evolutionary Microbiology, 54(4):1117-1122.

Nair, P N R; Schug, J (2004). Observations on healing of human tooth extraction sockets implanted with bioabsorbable polylactic-polyglycolic acids (PLGA) copolymer root replicas: a clinical, radiographic, and histologic follow-up report of 8 cases. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology and Endodontology, 97(5):559-569.

Guggenheim, B; Guggenheim, M; Gmür, R; Giertsen, E; Thurnheer, T (2004). Application of the Zürich biofilm model to problems of cariology. Caries Research, 38(3):212-222.

van der Ploeg, J R; Giertsen, E; Lüdin, B; Mörgeli, C; Zinkernagel, A S; Gmür, R (2004). Quantitative detection of Porphyromonas gingivalis fimA genotypes in dental plaque. FEMS Microbiology Letters, 232(1):31-37.

Gmür, R; Wyss, C; Xue, Y; Thurnheer, T; Guggenheim, B (2004). Gingival crevice microbiota from Chinese patients with gingivitis or necrotizing ulcerative gingivitis. European Journal of Oral Sciences, 112(1):33-41.

Thurnheer, T; Gmür, R; Guggenheim, B (2004). Multiplex FISH analysis of a six-species bacterial biofilm. Journal of Microbiological Methods, 56(1):37-47.

Nair, P N R (2004). Pathogenesis of apical periodontitis and the causes of endodontic failures. Critical Reviews in Oral Biology and Medicine, 15(6):348-381.

Correia, F F; Plummer, A R; Ellen, R P; Wyss, C; Boches, S K; Galvin, J L; Paster, B J; Dewhirst, F E (2003). Two paralogous families of a two-gene subtilisin operon are widely distributed in oral treponemes. Journal of Bacteriology, 185(23):6860-6869.

Zinkernagel, A S; Gmür, R; Fenner, L; Schaffner, A; Schoedon, G; Schneemann, M (2003). Marginal and subgingival plaque--a natural habitat of Tropheryma whipplei? Infection, 31(2):86-91.

Thurnheer, T; Gmür, R; Shapiro, S; Guggenheim, B (2003). Mass transport of macromolecules within an in vitro model of supragingival plaque. Applied and Environmental Microbiology, 69(3):1702-1709.

Kordic, A; Lussi, A; Luder, H U (2003). Performance of visual inspection, electrical conductance and laser fluorescence in detecting occlusal caries in vitro. Schweizer Monatsschrift für Zahnmedizin SMfZ, 113(8):852-859.

Nair, P N R; Baltensperger, M M; Luder, H U; Eyrich, G K H (2003). Pulpal response to Er:YAG laser drilling of dentine in healthy human third molars. Lasers in Surgery and Medicine, 32(3):203-209.

Zehnder, Matthias; Kosicki, D; Luder, H; Sener, Beatrice; Waltimo, T (2002). Tissue-dissolving capacity and antibacterial effect of buffered and unbuffered hypochlorite solutions. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology and Endodontology, 94(6):756-762.

Nair, P N R; Pajarola, G; Luder, H U (2002). Ciliated epithelium-lined radicular cysts. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology and Endodontology, 94(4):485-493.

Comelli, E M; Guggenheim, B; Stingele, F; Neeser, J R (2002). Selection of dairy bacterial strains as probiotics for oral health. European Journal of Oral Sciences, 110(3):218-224.

Gmür, R; Thurnheer, T (2002). Direct quantitative differentiation between Prevotella intermedia and Prevotella nigrescens in clinical specimens. Microbiology, 148(5):1379-1387.

Luder, H U (2002). Factors affecting degeneration in human temporomandibular joints as assessed histologically. European Journal of Oral Sciences, 110(2):106-113.

Rother, M; Böck, A; Wyss, C (2001). Selenium-dependent growth of Treponema denticola: evidence for a clostridial-type glycine reductase. Archives of Microbiology, 177(1):113-116.

Wyss, C; Dewhirst, F E; Gmür, R; Thurnheer, T; Xue, Y; Schüpbach, P; Guggenheim, B; Paster, B J (2001). Treponema parvum sp. nov., a small, glucoronic or galacturonic acid-dependent oral spirochaete from lesions of human periodontitis and acute necrotizing ulcerative gingivitis. International Journal of Systematic and Evolutionary Microbiology, 51(3):955-962.

Guggenheim, M; Shapiro, S; Gmür, R; Guggenheim, B (2001). Spatial arrangements and associative behavior of species in an in vitro oral biofilm model. Applied and Environmental Microbiology, 67(3):1343-1350.

Thurnheer, T; Gmür, R; Giertsen, E; Guggenheim, B (2001). Automated fluorescent in situ hybridization for the specific detection and quantification of oral streptococci in dental plaque. Journal of Microbiological Methods, 44(1):39-47.

Schüpbach, P; Oppenheim, F G; Lendenmann, U; Lamkin, M S; Yao, Y; Guggenheim, B (2001). Electron-microscopic demonstration of proline-rich proteins, statherin, and histatins in acquired enamel pellicles in vitro. European Journal of Oral Sciences, 109(1):60-68.

Laux, M; Abbott, P V; Pajarola, G; Nair, P N R (2000). Apical inflammatory root resorption: a correlative radiographic and histological assessment. International Endodontic Journal, 33(6):483-493.

Gmür, R; Guggenheim, B; Giertsen, E; Thurnheer, T (2000). Automated immunofluorescence for enumeration of selected taxa in supragingival dental plaque. European Journal of Oral Sciences, 108(5):393-402.

Giertsen, E; Guggenheim, B; Thurnheer, T; Gmür, R (2000). Microbiological aspects of an in situ model to study effects of antimicrobial agents on dental plaque ecology. European Journal of Oral Sciences, 108(5):403-411.

Wyss, C; Choi, B K; Schüpbach, P; Moter, A; Guggenheim, B; Göbel, U B (1999). Treponema lecithinolyticum sp. nov., a small saccharolytic spirochaete with phospholipase A and C activities associated with periodontal diseases. International Journal of Systematic and Evolutionary Microbiology, 49(4):1329-1339.

Mombelli, A; Gmür, R; Lang, N P; Corbert, E; Frey, J (1999). Actinobacillus actinomycetemcomitans in Chinese adults. Serotype distribution and analysis of the leukotoxin gene promoter locus. Journal of Clinical Periodontology, 26(8):505-510.

Gmür, R; Marinello, C P; Guggenheim, B (1999). Periodontitis associated bacteria in supragingival plaque of dental hygienists: stability of carrier state and clinical development. European Journal of Oral Sciences, 107(3):225-228.

Nair, P N R; Sjögren, U; Figdor, D; Sundqvist, G (1999). Persistent periapical radiolucencies of root-filled human teeth, failed endodontic treatments, and periapical scars. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology and Endodontology, 87(5):617-627.

Gmür, R; Thurnheer, T; Guggenheim, B (1999). Dominant cross-reactive antibodies generated during the response to a variety of oral bacterial species detect phosphorylcholine. Journal of Dental Research, 78(1):77-85.

Wyss, C (1998). Flagellins, but not endoflagellar sheath proteins, of Treponema pallidum and of pathogen-related oral spirochetes are glycosylated. Infection and Immunity, 66(12):5751-5754.

Luder, H U (1998). Age changes in the articular tissue of human mandibular condyles from adolescence to old age: a semiquantitative light microscopic study. Anatomical Record, Part B, 251(4):439-447.

Nair, P N R (1998). New perspectives on radicular cysts: do they heal? International Endodontic Journal, 31(3):155-160.

Nair, P N R; Sjögren, U; Sundqvist, G (1998). Cholesterol crystals as an etiological factor in non-resolving chronic inflammation: an experimental study in guinea pigs. European Journal of Oral Sciences, 106(2 Pt 1):644-650.

Wyss, C; Choi, B K; Schüpbach, P; Guggenheim, B; Göbel, U B (1997). Treponema amylovorum sp. nov., a saccharolytic spirochete of medium size isolated from an advanced human periodontal lesion. International Journal of Systematic and Evolutionary Microbiology, 47(3):842-845.

Thurnheer, T; Guggenheim, B; Gmür, R (1997). Characterization of monoclonal antibodies for rapid identification of Actinomyces naeslundii in clinical samples. FEMS Microbiology Letters, 150(2):255-262.

Luder, H U (1997). Frequency and distribution of articular tissue features in adult human mandibular condyles: a semiquantitative light microscopic study. Anatomical Record, Part B, 248(1):18-28.

Schüpbach, P; Neeser, J R; Golliard, M; Rouvet, M; Guggenheim, B (1996). Incorporation of caseinoglycomacropeptide and caseinophosphopeptide into the salivary pellicle inhibits adherence of mutans streptococci. Journal of Dental Research, 75(10):1779-1788.

Wyss, C; Choi, B K; Schüpbach, P; Guggenheim, B; Göbel, U B (1996). Treponema maltophilum sp. nov., a small oral spirochete isolated from human periodontal lesions. International Journal of Systematic and Evolutionary Microbiology, 46(3):745-752.

Bosshardt, D D; Schroeder, H E (1996). Cementogenesis reviewed: a comparison between human premolars and rodent molars. Anatomical Record, Part B, 245(2):267-292.

Marks Jr, Sandy C; Schroeder, H E (1996). Tooth eruption: theories and facts. Anatomical Record, Part B, 245(2):374-393.

Dahlén, G G; Johnson, J R; Gmür, R (1996). Prevotella intermedia and Prevotella nigrescens serotypes, ribotypes and binding characteristics. FEMS Microbiology Letters, 138(1):89-95.

Perry, M B; MacLean, L L; Gmür, R; Wilson, M E (1996). Characterization of the O-polysaccharide structure of lipopolysaccharide from Actinobacillus actinomycetemcomitans serotype b. Infection and Immunity, 64(4):1215-1219.

Nair, P N R; Pajarola, G; Schroeder, H E (1996). Types and incidence of human periapical lesions obtained with extracted teeth. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology and Endodontology, 81(1):93-102.

Baehni, P C; Guggenheim, B (1996). Potential of diagnostic microbiology for treatment and prognosis of dental caries and periodontal diseases. Critical Reviews in Oral Biology and Medicine, 7(3):259-277.

Walton, Richard E; Ramachandran Nair, P N (1995). Neural elements in dental pulp and dentin. Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology and Endodontology, 80(6):710-719.

van Steenbergen, T J M; Bosch-Tijhof, C J; van Winkelhoff, A J; Gmür, R; de Graaff, J (1994). Comparison of six typing methods for Actinobacillus actinomycetemcomitans. Journal of Clinical Microbiology, 32(11):2769-2774.

Gmür, R; Guggenheim, B (1994). Interdental supragingival plaque--a natural habitat of Actinobacillus actinomycetemcomitans, Bacteroides forsythus, Campylobacter rectus, and Prevotella nigrescens. Journal of Dental Research, 73(8):1421-1428.

Luder, H U (1993). Onset of human aging estimated from hazard functions associated with various causes of death. Mechanisms of Ageing and Development, 67(3):247-259.

Dahlén, G; Wikström, M; Renvert, S; Gmür, R; Guggenheim, B (1990). Biochemical and serological characterization of Bacteroides intermedius strains isolated from the deep periodontal pocket. Journal of Clinical Microbiology, 28(10):2269-2274.

Schüpbach, P; Guggenheim, B; Lutz, F (1990). Histopathology of root surface caries. Journal of Dental Research, 69(5):1195-1204.

Book Section

Marconi, Guya Diletta; Diomede, Francesca; Trubiani, Oriana; Porcheri, Cristina; Mitsiadis, Thimios A (2022). Exosomes as Carriers for Notch Molecules. In: Dongyu, Jia. Notch Signaling Research : Methods and Protocols. New York, NY: Springer, 197-208.

Porcheri, Cristina; Meisel, Christian Thomas; Mitsiadis, Thimios (2022). Linking Molecular Function with Tissue Structure in the Oral Cavity. In: Gruber, Reinhard; Stadlinger, Bernd; Terheyden, Hendrik. Cell Atlas : Visual Biology in Oral Medicine. Berlin: Quintessence Publishing, 207-216.

Porcheri, Cristina; Mitsiadis, Thimios A (2021). Notch in Head and Neck Cancer. In: Reichrath, Jörg; Reichrath, Sandra. Notch Signaling in Embryology and Cancer. Cham: Springer, 81-103.

Mitsiadis, Thimios A; Pagella, Pierfrancesco (2021). The Versatile Roles of Nerve Growth Factor in Neuronal Attraction, Odontoblast Differentiation, and Mineral Deposition in Human Teeth. In: Calzà, Laura; Aloe, Luigi; Giardino, Luciana. Recent Advances in NGF and Related Molecules. Cham: Springer, 65-75.

Pagella, Pierfrancesco; Mitsiadis, Thimios A (2020). Analysis of Tooth Innervation in Microfluidic Coculture Devices. In: Kioussi, Chrissa. Stem Cells and Tissue : Repair Methods and Protocols. New York: Springer, 99-106.

Jimenez-Rojo, Lucia; Mitsiadis, Thimios A (2019). Tissue Recombination and Kidney Capsule Transplantation Assays for the Study of Epithelial-Mesenchymal Interactions. In: Papagerakis, Petros. Odontogenesis. Methods and Protocols. New York: Springer, 49-55.

Mitsaidis, T; Massa, A; Orsini, G (2016). Cellule staminali del dente. In: Bonsi, Laura; Alviano, Francesco. Cellule staminali del dente. Italy: Esculapio Medicina, 151-156.

Mitsakakis, Konstantinos; Stumpf, Fabian; et al; Tawakoli, Pune N; Wegehaupt, Florian J; Attin, Thomas; Bostanci, Nagihan; Bao, Kai; Belibasakis, Georgios N (2016). Chair/bedside diagnosis of oral and respiratory tract infections, and identification of antibiotic resistances for personalised monitoring and treatment. In: Maglaveras, Nicos; Gizeli, Electra. pHealth 2016. Amsterdam: I O S Press, 61-66.

Mitsiadis, Thimios A; Orsini, Giovanna; Jiménez-Rojo, Lucia (2016). Dental stem cells for tooth regeneration. In: Zavan, B; Bressan, E. Dental stem cells: regenerative potential. Cham: Springer, 187-202.

Mitsiadis, Thimios A; Orsini, Giovanna (2016). Regenerative dentistry using stem cells and nanotechnology. In: Müller, Bert; Van de Voorde, Marcel. Nanoscience and Nanotechnology for Human Health. Weinheim: Wiley-VCH Verlag, 263-292.

Belibasakis, Georgios N; Charalampakis, Georgios; Bostanci, Nagihan; Stadlinger, Bernd (2015). Peri-implant infections of oral biofilm etiology. In: Donelli, Gianfranco. Biofilm-based Healthcare-associated Infections - Volume I. Cham: Springer, 69-84.

Mitsiadis, Thimios A; Papagerakis, P (2013). Development and structure of teeth and periodontal tissues. In: Rosen, Clifford J; Bouillon, Roger; Compston, Juliet E; Rosen, Vicki. Primer on the Metabolic Bone Diseases and Disorders of Mineral Metabolism. Ames: Wiley-Blackwell, 904-913.

Luder, H U; Amstad-Jossi, M (2012). Electron microscopy. In: Kioussi, C. Odontogenesis. Methods and Protocols. New York: Humana Press, 81-93.

Papagerakis, P; Mitsiadis, T A (2008). Development and Structure of Teeth and Periodontal Tissues. In: Rosen, Clifford J; Compston, Juliet E; Lian, Jane B. Primer on the Metabolic Bone Diseases and Disorders of Mineral Metabolism. Washington, DC: John Wiley & Sons, 491-496.

Nair, P N R (2008). Non-microbial endodontic disease. In: Ingle, J I; Bakland, L K; Baumgartner, J C. Ingle’s endodontics 6. Hamilton, Ont., US: BC Decker, 309-342.

Nair, P N R (2008). Pathobiology of apical periodontitis. In: Ørstavik, D; Pitt Ford, T R. Essential endodontology: prevention and treatment of apical periodontitis. Oxford, UK: Blackwell Munksgaard, 80-134.

Dissertation

Lamprou, Argyro. The Roles of Notch Signalling in Rodent Incisor Development. 2025, University of Zurich, Faculty of Science.

Balic, Anamaria. Die Venia Legendi für das Gebiet Orale Biologie. 2023, University of Zurich, Faculty of Medicine.

Miran, Shayee. Organs-on-chips for regenerative dentistry. 2020, University of Zurich, Faculty of Medicine.

Bao, Kai. Novel organotypic modelling for the study of periodontal infection. 2015, University of Zurich, Faculty of Science.

Ye, Minglu. Noggin - an antagonist of bone morphogenetic protein - is crucial for tooth hard tissue and periodontium development. 2015, University of Zurich, Faculty of Medicine.

Filatova, Anna. The role of Fam20a in the generation of amelogenesis imperfecta. 2015, University of Zurich, Faculty of Medicine.

Pagella, Pierfrancesco. The role of nogo-a in tooth development and regeneration. 2015, University of Zurich, Faculty of Medicine.

Willi, Martin. Expression and regulation of triggering receptor expressed on myeloid cells 1 in periodontal diseases. 2014, University of Zurich, Faculty of Medicine.

Do Cabo Fernandes, Claudia. Identification of Synergistetes in endodontic infections. 2014, University of Zurich, Faculty of Medicine.

Rohrer, Elodie. Wirkung von Ultraschall auf einen in vitro supragingivalen Biofilm. 2014, University of Zurich, Faculty of Medicine.

Suter, Flurina Bettina. Diversität von Selenomonas Bakterien in subgingivaler Plaque. 2013, University of Zurich, Faculty of Medicine.

Quevedo, Beatrice. Phylogenetic group- and species-specific oligonucleotide probes for single-cell detection of lactic acid bacteria in oral biofilms. 2013, University of Zurich, Faculty of Medicine.

Baumgartner, Angelica Anna. The phylum Synergistetes in gingivitis and necrotizing ulcerative gingivitis. 2012, University of Zurich, Faculty of Medicine.

Hersche, S. Entwicklung eines automatisierten Fluoreszenzmikroskop- und Bildverarbeitungssystems zur quantitativen Bestimmung von Bakterien aus oralen Biofilmen. 2011, University of Zurich, Faculty of Medicine.

Lüdin, N D. Phylogenetic characterization of subgingival plaque associated with aggressive or chronic periodontitis. 2011, University of Zurich, Faculty of Medicine.

Luso, S. Resorptionsmuster und radiologische Diagnose externer Granulome – eine korrelative MikroCT, rasterelektronen- und lichtmikroskopische Analyse einer Fallserie. 2011, University of Zurich, Faculty of Medicine.

Antonini, L G. Zahnverfärbungen durch Tetracycline - heute noch? Auswertung einer Fallserie. 2011, University of Zurich, Faculty of Medicine.

Habilitation

Belibasakis, Georgios N. Molecular mechanisms of bone resorption in periodontitis. 2011, University of Zurich, Faculty of Medicine.

Bostanci, Nagihan. Targeting of inflammatory cytokine networks by periodontal pathogens : Kumulative Habilitationsschrift. 2011, University of Zurich, Faculty of Medicine.

van der Ploeg, J R. Bacteriophages from oral streptococci. 2009, University of Zurich, Faculty of Medicine.

Graf, D. Mapping and dissection of bone morphogenetic protein signaling using genome-engineering tools. 2009, University of Zurich, Faculty of Medicine.

Edited Scientific Work

Signaling pathways in developing and pathological tissues and organs of the craniofacial complex. Edited by: Mitsiadis, Thimios A; Cantù, Claudio; Jimenez-Rojo, Lucia (2018). Lausanne: Frontiers Media SA.

Published Research Report

Mitsiadis, Thimios (2023). Wie Zahnschmelz evolutionär entsteht. https://www.news.uzh.ch: Universität Zürich.

Mitsiadis, Thimios (2023). How the evolution of tooth enamel tissue unfolded. Zürich: ScienceDaily : Your source for the latest research news.

Mitsiadis, Thimios (2022). Genetic Defects Linked to Enamel Malformations. Zürich: Zentrum für Zahnmedizin.

Mitsiadis, Thimios A (2021). Comprehensive single-cell atlas of human teeth. University Zürich: Science Daily.

Pagella, Pierfrancesco; Stadlinger, Bernd; Moor, Andreas; Mitsiadis, Thimios A (2021). Erstmals alle Zellen menschlicher Zähne detailliert entschlüsselt. University Zürich: Dental Magazin.

Mitsiadis, Thimios A (2021). Researchers Complete Atlas of Single Cells That Make Up Human Teeth. University Zürich: Dentistry Today.

Mitsiadis, Thimios A (2021). The First Comprehensive Single-Cell Atlas of Human Teeth. Zürich: University of Zurich.

Scientific Publication in Electronic Form

Mitsiadis, Thimios (2023). An atlas showing the genetic modifications occurring in all dental pulp cell populations upon carious insult in human teeth. Research Communities: Springer Nature.

Mitsiadis, Thimios (2023). Role of notch signaling in the evolution of teeth revealed. www.technologynetworks.com: Technology Networks.

Mitsiadis, Thimios (2018). Medizin im Umbruch - Lebendige Organe auf einem Chip. : SRF.

Luder, Hans Ulrich; Mitsiadis, Thimios A (2012). Tooth Agenesis. Chichester: Wiley.