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Neuenschwander, Stefan M; Ghai, Rohit; Pernthaler, Jakob; Salcher, Michaela M (2018). Microdiversification in genome-streamlined ubiquitous freshwater Actinobacteria. The ISME journal, 12:185-198.

Zhang, Qianqian; van Wijk, Ringo; Shahbaz, Muhammad; Roels, Wendy; van Schooten, Bas; Vermeer, Joop E M; Zarza, Xavier; Guardia, Aisha; Scuffi, Denise; García-Mata, Carlos; Laha, Debabrata; Williams, Phoebe; Willems, Leo A J; Ligterink, Wilco; Hoffmann-Benning, Susanne; Gillaspy, Glenda; Schaaf, Gabriel; Haring, Michel A; Laxalt, Ana M; Munnik, Teun (2018). Arabidopsis Phospholipase C3 is Involved in Lateral Root Initiation and ABA Responses in Seed Germination and Stomatal Closure. Plant & Cell Physiology, 59(3):469-486.

Stritt, Christoph; Gordon, Sean P; Wicker, Thomas; Vogel, John P; Roulin, Anne C (2018). Recent activity in expanding populations and purifying selection have shaped transposable element landscapes across natural accessions of the mediterranean grass brachypodium distachyon. Genome Biology and Evolution, 10(1):304-318.

Sasse, Joelle; Martinoia, Enrico; Northen, Trent (2018). Feed Your Friends: Do Plant Exudates Shape the Root Microbiome? Trends in Plant Science, 23(1):25-41.

Boni, Rainer; Chauhan, Harsh; Hensel, Goetz; Roulin, Anne; Sucher, Justine; Kumlehn, Jochen; Brunner, Susanne; Krattinger, Simon G; Keller, Beat (2018). Pathogen-inducible Ta-Lr34res expression in heterologous barley confers disease resistance without negative pleiotropic effects. Plant Biotechnology Journal, 16(1):245-253.

Jacquat, Christiane; Della Casa, Philippe (2018). Airolo-Madrano (TI): Palaeoenvironment and subsistence strategies of a hilltop settlement in the southern Swiss Alps during the Bronze and Iron Ages. Quaternary International: The Journal of the International Union for Quaternary Research, 484:32-43.

Šimek, Karel; Grujčić, Vesna; Hahn, Martin W; Horňák, Karel; Jezberová, Jitka; Kasalický, Vojtěch; Nedoma, Jiří; Salcher, Michaela M; Shabarova, Tanja (2018). Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates. Limnology and Oceanography, 63(1):484-502.

Das, Aditi; Guyer, Luzia; Hörtensteiner, Stefan (2018). Chlorophyll and Chlorophyll Catabolite Analysis by HPLC. In: Guo, Yongfeng. Plant Senescence : Methods and Protocols. New York: Springer, 223-235.

Ma, Xin; Keller, Beat; McDonald, Bruce A; Palma-Guerrero, Javier; Wicker, Thomas (2018). Comparative transcriptomics reveals how wheat responds to infection by Zymoseptoria tritici. Molecular Plant-Microbe Interactions, 31(4):420-431.

Rövekamp, Moritz. Insights from Marchantia polymorpha into the evolutionary development of land plant sexual reproduction. 2018, University of Zurich, Faculty of Science.

Ndinyanka Fabrice, Tohnyui; Vogler, Hannes; Draeger, Christian; Munglani, Gautam; Gupta, Shibu; Herger, Aline Galatea; Knox, J Paul; Grossniklaus, Ueli; Ringli, Christoph (2018). LRX Proteins play a crucial role in pollen grain and pollen tube cell wall development. Plant Physiology, 176(3):1981-1992.

Deppe, Johannes. Physiological characterization of the wheat ABC transporter Lr34. 2018, University of Zurich, Faculty of Science.

Leinweber, Anne. The struggle for iron: how it affects cooperation, competition and biodiversity in bacterial communities. 2018, University of Zurich, Faculty of Science.

Sucher, J; Menardo, F; Praz, C R; Boni, R; Krattinger, S G; Keller, B (2018). Transcriptional profiling reveals no response of fungal pathogens to the durable, quantitative Lr34 disease resistance gene of wheat. Plant Biology, 67(4):792-798.

Fabrice, Tohnyui Ndinyanka; Cherkezyan, Lusik; Ringli, Christoph; Baroux, Célia (2018). Transmission electron microscopy imaging to analyze chromatin density distribution at the nanoscale level. In: Bemer, Marian; Baroux, Célia. Plant Chromatin Dynamics : Methods and Protocols. New York, NY: Springer, 633-651.

Müller, Thomas; Schierscher-Viret, Beate; Fossati, Dario; Brabant, Cécile; Schori, Arnold; Keller, Beat; Krattinger, Simon G (2018). Unlocking the diversity of genebanks: whole-genome marker analysis of Swiss bread wheat and spelt. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 131(2):407-416.


Wicker, Thomas; Schulman, Alan H; Tanskanen, Jaakko; Spannagl, Manuel; Twardziok, Sven; Mascher, Martin; Springer, Nathan M; Li, Qing; Waugh, Robbie; Li, Chengdao; Zhang, Guoping; Stein, Nils; Mayer, Klaus F. X; Gundlach, Heidrun (2017). The repetitive landscape of the 5100 Mbp barley genome. Mobile DNA:8:22.

Gordon, Sean P; Contreras-Moreira, Bruno; Woods, Daniel P; Des Marais, David L; Burgess, Diane; Shu, Shengqiang; Stritt, Christoph; Roulin, Anne C; Schackwitz, Wendy; Tyler, Ludmila; Martin, Joel; Lipzen, Anna; Dochy, Niklas; Phillips, Jeremy; Barry, Kerrie; Geuten, Koen; Budak, Hikmet; Juenger, Thomas E; Amasino, Richard; Caicedo, Ana L; Goodstein, David; Davidson, Patrick; Mur, Luis A. J; Figueroa, Melania; Freeling, Michael; Catalan, Pilar; Vogel, John P (2017). Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure. Nature Communications, 8(1):2184.

Praz, Coraline R; Bourras, Salim; Zeng, Fansong; Sánchez-Martín, Javier; Menardo, Fabrizio; Xue, Minfeng; Yang, Lijun; Roffler, Stefan; Böni, Rainer; Herren, Gerard; McNally, Kaitlin E; Ben-David, Roi; Parlange, Francis; Oberhaensli, Simone; Flückiger, Simon; Schäfer, Luisa K; Wicker, Thomas; Yu, Dazhao; Keller, Beat (2017). AvrPm2 encodes an RNase-like avirulence effector which is conserved in the two different specialized forms of wheat and rye powdery mildew fungus. New Phytologist, 213(3):1301-1314.

Christ, Bastien; Hochstrasser, Ramon; Guyer, Luzia; Francisco, Rita; Aubry, Sylvain; Hörtensteiner, Stefan; Weng, Jing-Ke (2017). Non-specific activities of the major herbicide-resistance gene BAR. Nature Plants, 3(12):937-945.

Luo, Ming-Cheng; Gu, Yong Q; et al; Wicker, Thomas; Dvořák, Jan (2017). Genome sequence of the progenitor of the wheat D genome Aegilops tauschii. Nature:498-502.

Ruinelli, Michela. Genomic Investigations of Members of the Pseudomonas syringae Species Complex Associated with Prunus spp. and Kiwifruit. 2017, University of Zurich, Faculty of Science.

Menardo, Fabrizio; Praz, Coraline R; Wicker, Thomas; Keller, Beat (2017). Rapid turnover of effectors in grass powdery mildew (Blumeria graminis). BMC Evolutionary Biology, 17(1):223.

Ndinyanka Fabrice, Tohnyui; Kaech, Andres; Barmettler, Gery; Eichenberger, Christof; Knox, J Paul; Grossniklaus, Ueli; Ringli, Christoph (2017). Efficient preparation of Arabidopsis pollen tubes for ultrastructural analysis using chemical and cryo-fixation. BMC Plant Biology, 17:176.

Park, Jiyoung; Lee, Youngsook; Martinoia, Enrico; Geisler, Markus (2017). Plant hormone transporters: what we know and what we would like to know. BMC Biology, 15(1):93.

Yankova, Yana; Neuenschwander, Stefan; Köster, Oliver; Posch, Thomas (2017). Abrupt stop of deep water turnover with lake warming: Drastic consequences for algal primary producers. Scientific Reports, 7(1):13770.

Bowman, John L; Kohchi, Takayuki; Yamato, Katsuyuki T; Jenkins, Jerry; Shu, Shengqiang; Ishizaki, Kimitsune; Yamaoka, Shohei; Nishihama, Ryuichi; Nakamura, Yasukazu; Berger, Frédéric; Adam, Catherine; Aki, Shiori Sugamata; Althoff, Felix; Araki, Takashi; Arteaga-Vazquez, Mario A; Balasubrmanian, Sureshkumar; Barry, Kerrie; Bauer, Diane; Boehm, Christian R; Briginshaw, Liam; Caballero-Perez, Juan; Catarino, Bruno; Chen, Feng; Chiyoda, Shota; Chovatia, Mansi; Davies, Kevin M; Delmans, Mihails; Demura, Taku; Dierschke, Tom; Dolan, Liam; Rövekamp, Moritz; Schmid, Marc W; et al (2017). Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. Cell, 171(2):287-304.

Yang, Ping; Herren, Gerhard; Krattinger, Simon; Keller, Beat (2017). Large-scale maize seedling infection with exserohilum turcicum in the greenhouse. Bio-protocol, 7(19):e2567.

Gujas, Bojan; Cruz, Tiago M D; Kastanaki, Elizabeth; Vermeer, Joop E M; Munnik, Teun; Rodriguez-Villalon, Antia (2017). Perturbing phosphoinositide homeostasis oppositely affects vascular differentiation in Arabidopsis thaliana roots. Development, 144(19):3578-3589.

Eisenach, Cornelia; Baetz, Ulrike; Huck, Nicola V; Zhang, Jingbo; De Angeli, Alexis; Beckers, Gerold J M; Martinoia, Enrico (2017). ABA-induced stomatal closure involves ALMT4, a phosphorylation-dependent vacuolar anion channel of arabidopsis. Plant Cell, 29(10):2552-2569.

Granato, Elisa T; Kümmerli, Rolf (2017). The path to re-evolve cooperation is constrained in Pseudomonas aeruginosa. BMC Evolutionary Biology, 17(1):214.

Stoeckle, Dorothee; Thellmann, Martha; Vermeer, Joop E M (2017). Breakout-lateral root emergence in Arabidopsis thaliana. Current Opinion in Plant Biology, 41:67-72.

Pitsch, Gianna; Adamec, Lubomír; Dirren, Sebastian; Nitsche, Frank; Šimek, Karel; Sirová, Dagmara; Posch, Thomas (2017). The green tetrahymena utriculariae n. sp. (ciliophora, oligohymenophorea) with its endosymbiotic algae (micractinium sp.), living in traps of a carnivorous aquatic plant. Journal of Eukaryotic Microbiology, 64(3):322-335.

Schöneberg, Torsten. Occurrence and Epidemiology of Fusarium Species in Barley and Oats. 2017, University of Zurich, Faculty of Science.

Šimek, Karel; Pitsch, Gianna; Salcher, Michaela M; Sirová, Dagmara; Shabarova, Tanja; Adamec, Lubomír; Posch, Thomas (2017). Ecological Traits of the Algae-Bearing Tetrahymena utriculariae (Ciliophora) from Traps of the Aquatic Carnivorous Plant Utricularia reflexa. Journal of Eukaryotic Microbiology, 64(3):336-348.

Guyer, Luzia; Salinger, Kathrin; Krügel, Undine; Hörtensteiner, Stefan (2017). Catalytic and structural properties of pheophytinase, the phytol esterase involved in chlorophyll breakdown. Journal of Experimental Botany, 69:879-889.

Granato, Elisa. Evolution of Cooperation and Virulence in an Opportunistic Pathogen. 2017, University of Zurich, Faculty of Science.

Kuai, Benke; Chen, Junyi; Hörtensteiner, Stefan (2017). The biochemistry and molecular biology of chlorophyll breakdown. Journal of Experimental Botany, 69(4):751-767.

Toyofuku, Masanori; Cárcamo-Oyarce, Gerardo; Yamamoto, Tatsuya; Eisenstein, Fabian; Hsiao, Chien-Chi; Kurosawa, Masaharu; Gademann, Karl; Pilhofer, Martin; Nomura, Nobuhiko; Eberl, Leo (2017). Prophage-triggered membrane vesicle formation through peptidoglycan damage in Bacillus subtilis. Nature Communications, 8:481.

Butaitė, Elena; Baumgartner, Michael; Wyder, Stefan; Kümmerli, Rolf (2017). Siderophore cheating and cheating resistance shape competition for iron in soil and freshwater Pseudomonas communities. Nature Communications, 8(1):414.

Thind, Anupriya K; Wicker, Thomas; Krattinger, Simon G (2017). Rapid identification of rust resistance genes through cultivar-specific de novo chromosome assemblies. In: Periyannan, Sam. Wheat Rust Diseases. New York, NY: Springer, 245-255.

Do, Thanh Ha Thi; Martinoia, Enrico; Lee, Youngsook (2017). Functions of ABC transporters in plant growth and development. Current Opinion in Plant Biology, 41:32-38.

Boni, Rainer. Functional Characterization of the Wheat Disease Resistance Gene Lr34 in Heterologous Barley. 2017, University of Zurich, Faculty of Science.

Dirren, Sebastian; Pitsch, Gianna; Silva, Marisa O D; Posch, Thomas (2017). Grazing of Nuclearia thermophila and Nuclearia delicatula (Nucleariidae, Opisthokonta) on the toxic cyanobacterium Planktothrix rubescens. European Journal of Protistology, 60:87-101.

Thalmann, Matthias. The Function and Regulation of Starch Degradation during Plant Responses to Abiotic Stress. 2017, University of Zurich, Faculty of Science.

Khare, Deepa; Choi, Hyunju; Huh, Sung Un; Bassin, Barbara; Kim, Jeongsik; Martinoia, Enrico; Sohn, Kee Hoon; Paek, Kyung-Hee; Lee, Youngsook (2017). Arabidopsis ABCG34 contributes to defense against necrotrophic pathogens by mediating the secretion of camalexin. Proceedings of the National Academy of Sciences of the United States of America, 114(28):E5712-E5720.

Vermeer, Joop E M; van Wijk, Ringo; Goedhart, Joachim; Geldner, Niko; Chory, Joanne; Gadella, Theodorus W J; Munnik, Teun (2017). In Vivo Imaging of Diacylglycerol at the Cytoplasmic Leaflet of Plant Membranes. Plant & Cell Physiology, 58(7):1196-1207.

Weigert, Michael; Kümmerli, Rolf (2017). The physical boundaries of public goods cooperation between surface-attached bacterial cells. Proceedings of the Royal Society of London, Series B: Biological Sciences, 284(1858):20170631.

Eversole, Kellye; Rogers, Jane; Keller, Beat; Appels, Rudi; Feuillet, Catherine (2017). Sequencing and assembly of the wheat genome. In: Langridge, Peter. Achieving sustainable cultivation of wheat Volume 1: Breeding, quality traits, pests and diseases. Cambridge, UK: Burleigh Dodds Science Publishing, 25-52.

Ezer, Daphne; Jung, Jae-Hoon; Lan, Hui; Biswas, Surojit; Gregoire, Laura; Box, Mathew S; Charoensawan, Varodom; Cortijo, Sandra; Lai, Xuelei; Stöckle, Dorothee; Zubieta, Chloe; Jaeger, Katja E; Wigge, Philip A (2017). The evening complex coordinates environmental and endogenous signals in Arabidopsis. Nature Plants, 3:17087.

Yankova, Yana. Effects of Lake Warming on Cyanobacterial and Algal Bloom Dynamics. 2017, University of Zurich, Faculty of Science.

Baumgartner, Michael; Roffler, Stefan; Wicker, Thomas; Pernthaler, Jakob (2017). Letting go: bacterial genome reduction solves the dilemma of adapting to predation mortality in a substrate-restricted environment. The ISME journal, 11(10):2258-2266.

Hu, Chengzhi; Zhang, Qi; Meyer, Tobias; Vogler, Hannes; Burri, Jan T; Shamsudhin, Naveen; Grossniklaus, Ueli; Nelson, Bradley J (2017). In vivo tracking and measurement of pollen tube vesicle motion. In: 2017 IEEE International Conference on Robotics and Automation (ICRA), Singapore, 29 May 2017 - 3 June 2017, 3575-3580.

Kang, Joohyun; Lee, Youngsook; Sakakibara, Hitoshi; Martinoia, Enrico (2017). Cytokinin transporters: GO and STOP in signaling. Trends in Plant Science, 22(6):455-461.

Santelia, Diana; Lunn, John E (2017). Transitory starch metabolism in guard cells: unique features for a unique function. Plant Physiology, 174(2):539-549.

Ndinyanka Fabrice, Tohnyui. An Integrated Systems Understanding of the Dynamic Interplay between Plant Cell Growth and Pollen Tube Cell Wall Development. 2017, University of Zurich, Faculty of Science.

Nadal, Marina; Sawers, Ruairidh; Naseem, Shamoon; Bassin, Barbara; Kulicke, Corinna; Sharman, Abigail; An, Gynheung; An, Kyungsook; Ahern, Kevin R; Romag, Amanda; Brutnell, Thomas P; Gutjahr, Caroline; Geldner, Niko; Roux, Christophe; Martinoia, Enrico; Konopka, James B; Paszkowski, Uta (2017). An N-acetylglucosamine transporter required for arbuscular mycorrhizal symbioses in rice and maize. Nature Plants, 3:17073.

Pernthaler, Jakob (2017). Competition and niche separation of pelagic bacteria in freshwater habitats. Environmental Microbiology, 19(6):2133-2150.

Thind, Anupriya Kaur; Wicker, Thomas; Šimková, Hana; Fossati, Dario; Moullet, Odile; Brabant, Cécile; Vrána, Jan; Doležel, Jaroslav; Krattinger, Simon G (2017). Rapid cloning of genes in hexaploid wheat using cultivar-specific long-range chromosome assembly. Nature Biotechnology, 35(8):793-796.

Nguyen, Chi Tam; Martinoia, Enrico; Farmer, Edward E (2017). Emerging jasmonate transporters. Molecular Plant, 10(5):659-661.

Thalmann, Matthias; Santelia, Diana (2017). Starch as a determinant of plant fitness under abiotic stress. New Phytologist, 214(3):943-951.

Mascher, Martin; Gundlach, Heidrun; et al; Wicker, Thomas; Stein, Nils (2017). A chromosome conformation capture ordered sequence of the barley genome. Nature, 544(7651):427-433.

Keller, Beat; Krattinger, Simon G (2017). Plant science: Genomic compartments in barley. Nature, 544(7651):424-425.

Schnippenkoetter, Wendelin; Lo, Clive; Liu, Guoquan; Dibley, Katherine; Chan, Wai Lung; White, Jodie; Milne, Ricky; Zwart, Alexander; Kwong, Eunjung; Keller, Beat; Godwin, Ian; Krattinger, Simon G; Lagudah, Evans (2017). The wheat Lr34 multipathogen resistance gene confers resistance to anthracnose and rust in sorghum. Plant Biotechnology Journal, 15(11):1387-1396.

Bucher, Rahel; Veyel, Daniel; Willmitzer, Lothar; Krattinger, Simon; Keller, Beat; Bigler, Laurent (2017). Combined GC- and UHPLC-HR-MS based metabolomics to analyze durable anti-fungal resistance processes in cereals. CHIMIA International Journal for Chemistry, 71(4):156-159.

Sucher, Justine; Boni, Rainer; Yang, Ping; Rogowsky, Peter; Büchner, Heike; Kastner, Christine; Kumlehn, Jochen; Krattinger, Simon G; Keller, Beat (2017). The durable wheat disease resistance gene Lr34 confers common rust and northern corn leaf blight resistance in maize. Plant Biotechnology Journal, 15(4):489-496.

Feehan, Joanna M; Scheibel, Katherine E; Bourras, Salim; Underwood, William; Keller, Beat; Somerville, Shauna C (2017). Purification of high molecular weight genomic DNA from powdery mildew for long-read sequencing. Journal of Visualized Experiments (Jove), (121):online.

Imperiali, Nicola; Dennert, Francesca; Schneider, Jana; Laessle, Titouan; Velatta, Christelle; Fesselet, Marie; Wyler, Michele; Mascher, Fabio; Mavrodi, Olga; Mavrodi, Dmitri; Maurhofer, Monika; Keel, Christoph (2017). Relationships between root pathogen resistance, abundance and expression of pseudomonas antimicrobial genes, and soil properties in representative swiss agricultural soils. Frontiers in Plant Science, 8:427.

Hyles, J; Vautrin, S; Pettolino, F; MacMillan, C; Stachurski, Z; Breen, J; Berges, H; Wicker, T; Spielmeyer, W (2017). Repeat-length variation in a wheat cellulose synthase-like gene is associated with altered tiller number and stem cell wall composition. Journal of Experimental Botany, 68(7):1519-1529.

Grossmann, Jonas; Fernández, Helena; Chaubey, Pururawa M; Valdés, Ana E; Gagliardini, Valeria; Cañal, María J; Russo, Giancarlo; Grossniklaus, Ueli (2017). Proteogenomic analysis greatly expands the identification of proteins related to reproduction in the apogamous fern dryopteris affinis ssp. affinis. Frontiers in Plant Science, 8:336.

Rinaldo, Amy; Gilbert, Brian; Boni, Rainer; Krattinger, Simon G; Singh, Davinder; Park, Robert F; Lagudah, Evans; Ayliffe, Michael (2017). The Lr34 adult plant rust resistance gene provides seedling resistance in durum wheat without senescence. Plant Biotechnology Journal, 15(7):894-905.

Shabarova, Tanja; Kasalický, Vojtěch; Šimek, Karel; Nedoma, Jiří; Znachor, Petr; Posch, Thomas; Pernthaler, Jakob; Salcher, Michaela M (2017). Distribution and ecological preferences of the freshwater lineage LimA (genus Limnohabitans) revealed by a new double hybridization approach. Environmental Microbiology, 19(3):1296-1309.

Krattinger, Simon G; Keller, Beat (2017). Resistance: Double gain with one gene. Nature Plants, 3:17019.

Kuhn, Benjamin M; Nodzyński, Tomasz; Errafi, Sanae; Bucher, Rahel; Gupta, Shibu; Aryal, Bibek; Dobrev, Petre; Bigler, Laurent; Geisler, Markus; Zažímalová, Eva; Friml, Jiří; Ringli, Christoph (2017). Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity. Scientific Reports, 7:41906.

Menardo, Fabrizio; Wicker, Thomas; Keller, Beat (2017). Reconstructing the evolutionary history of powdery mildew lineages (Blumeria graminis) at different evolutionary time scales with NGS data. Genome Biology and Evolution, 9(2):446-456.

Zhang, Jie; Hwang, Jae-Ung; Song, Won-Yong; Martinoia, Enrico; Lee, Youngsook (2017). Identification of amino acid residues important for the arsenic resistance function of Arabidopsis ABCC1. FEBS letters, 591(4):656-666.

Khare, Deepa; Mitsuda, Nobukata; Lee, Seungchul; Song, Won-Yong; Hwang, Daehee; Ohme-Takagi, Masaru; Martinoia, Enrico; Lee, Youngsook; Hwang, Jae-Ung (2017). Root avoidance of toxic metals requires the GeBP-LIKE 4 transcription factor in Arabidopsis thaliana. New Phytologist, 213(3):1257-1273.

Sucher, Justine. Study of the wheat resistance gene Lr34 after its transfer into heterologous crop species. 2017, University of Zurich, Faculty of Science.

Weigert, Michael; Ross-Gillespie, Adin; Leinweber, Anne; Pessi, Gabriella; Brown, Sam P; Kümmerli, Rolf (2017). Manipulating virulence factor availability can have complex consequences for infections. Evolutionary Applications, 10(1):91-101.

Vogler, Hannes; Grossniklaus, Ueli; Hedhly, Afif (2017). An introduction to male germline development. In: Schmidt, Anja. Plant Germline Development. New York: Springer, 3-15.

Alfreider, Albin; Baumer, Andreas; Bogensperger, Teresa; Posch, Thomas; Salcher, Michaela M; Summerer, Monika (2017). CO2 assimilation strategies in stratified lakes: Diversity and distribution patterns of chemolithoautotrophs. Environmental Microbiology, 19(7):2754-2768.

She, Wenjing; Baroux, Célia; Grossniklaus, Ueli (2017). Cell-type specific chromatin analysis in whole-mount plant tissues by immunostaining. In: Bemer, Marian; Baroux, Célia. Plant Chromatin Dynamics. New York: Springer, 443-454.

Singla, Jyoti; Lüthi, Linda; Wicker, Thomas; Bansal, Urmil; Krattinger, Simon G; Keller, Beat (2017). Characterization of Lr75: a partial, broad-spectrum leaf rust resistance gene in wheat. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 130(1):1-12.

Hu, Chengzhi; Munglani, Gautam; Vogler, Hannes; Ndinyanka Fabrice, Tohnyui; Shamsudhin, Naveen; Wittel, Falk K; Ringli, Christoph; Grossniklaus, Ueli; Herrmann, Hans J; Nelson, Bradley J (2017). Characterization of size-dependent mechanical properties of tip-growing cells using a lab-on-chip device. Lab on a chip, 17(1):82-90.

Leinweber, Anne; Fredrik Inglis, R; Kümmerli, Rolf (2017). Cheating fosters species co-existence in well-mixed bacterial communities. The ISME journal, 11(5):1179-1188.

Grob, Stefan; Grossniklaus, Ueli (2017). Chromatin Conformation Capture-Based Analysis of Nuclear Architecture. In: Kovalchuk, I. Plant Epigenetics. Boston, MA: Springer, 15-32.

You, Wanhui; Pien, Stéphane; Grossniklaus, Ueli (2017). Chromatin Immunoprecipitation Protocol for Histone Modifications and Protein-DNA binding analyses in arabidopsis. In: Kovalchuk, I. Plant Epigenetics. Boston, MA: Springer, 1-13.

Grob, Stefan; Grossniklaus, Ueli (2017). Chromosome conformation capture-based studies reveal novel features of plant nuclear architecture. Current Opinion in Plant Biology, 36:149-157.

Sasheva, Pavlina; Grossniklaus, Ueli (2017). Differentially methylated region-representational difference analysis (DMR-RDA): a powerful method to identify DMRs in uncharacterized genomes. In: Kovalchuk, I. Plant Epigenetics. Boston, MA: Springer, 113-125.

Qureshi, Naeela; Bariana, Harbans; Forrest, Kerrie; Hayden, Matthew; Keller, Beat; Wicker, Thomas; Faris, Justin; Salina, Elena; Bansal, Urmil (2017). Fine mapping of the chromosome 5B region carrying closely linked rust resistance genes Yr47 and Lr52 in wheat. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 130(3):495-504.

Meier, Margrith; Suppiger, Angela; Eberl, Leo; Seeger, Stefan (2017). Functional silver-silicone-nanofilament-composite material for water disinfection. Small, 13(4):1601072.

Hu, Chengzhi; Vogler, Hannes; Aellen, Marianne; Shamsudhin, Naveen; Jang, Bumjin; Burri, Jan T; Läubli, Nino; Grossniklaus, Ueli; Pané, Salvador; Nelson, Bradley J (2017). High precision, localized proton gradients and fluxes generated by a microelectrode device induce differential growth behaviors of pollen tubes. Lab on a chip, 17(4):671-680.

Pires, Nuno D; Grossniklaus, Ueli (2017). Identification of parent-of-origin-dependent QTLs using bulk-segregant sequencing (Bulk-Seq). In: Bemer, Marian; Baroux, Célia. Plant Chromatin Dynamics. New York: Springer, 361-371.

Hauenstein, Mareike; Hörtensteiner, Stefan (2017). Isolation and detection of the chlorophyll catabolite hydroxylating activity from capsicum annuum chromoplasts. Bio-protocol, 7(18):e2561.

Bouchaud, Charlene; Jacquat, Christiane; Martinoli, Danièle (2017). Landscape use and fruit cultivation in Petra (Jordan) from Early Nabataean to Byzantine times (2nd century bc–5th century ad). Vegetation History and Archaeobotany, 26(2):223-244.

Rellstab, C; Fischer, M C; Zoller, S; Graf, R; Tedder, Andrew; Shimizu, Kentaro K; Widmer, A; Holderegger, R; Gugerli, F (2017). Local adaptation (mostly) remains local: reassessing environmental associations of climate-related candidate SNPs in Arabidopsis halleri. Heredity, 118(2):193-201.

Vogler, Hannes; Shamsudhin, Naveen; Nelson, Bradley J; Grossniklaus, Ueli (2017). Measuring cytomechanical forces on growing pollen tubes. In: Kovalchuk, I. Pollen tip growth : from biophysical aspects to systems biology. New York: Springer, 65-85.

McNally, Kaitlin. Molecular and evolutionary studies of race-specific avirulence factors from wheat powdery mildew (Blumeria graminis f. sp. tritici). 2017, University of Zurich, Faculty of Science.

Baroux, Célia; Pecinka, Ales; Fuchs, Jörg; Kreth, Gregor; Schubert, Ingo; Grossniklaus, Ueli (2017). Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma, 126(1):115-124.

Vogiatzaki, Evangelia; Baroux, Célia; Jung, Ji-Yul; Poirier, Yves (2017). PHO1 exports phosphate from the chalazal seed coat to the embryo in developing arabidopsis seeds. Current Biology, 27(19):2893-2900.

Kotliński, Maciej; Knizewski, Lukasz; Muszewska, Anna; Rutowicz, Kinga; Lirski, Maciej; Schmidt, Anja; Baroux, Célia; Ginalski, Krzysztof; Jerzmanowski, Andrzej (2017). Phylogeny-based systematization of arabidopsis proteins with histone H1 globular domain. Plant Physiology, 174(1):27-34.

Grossniklaus, Ueli (2017). Polyspermy produces tri-parental seeds in maize. Current Biology, 27(24):1300-1302.

Butaitė, Elena. Pyoverdine production and its social effects in natural communities of Pseudomonas bacteria. 2017, University of Zurich, Faculty of Science.

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Menardo, Fabrizio. Evolutionary Genomics of Grass Powdery Mildew (Blumeria graminis). 2016, University of Zurich, Faculty of Science.

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Das, A. Characterization of the PAO/phyllobilin Pathway of Chlorophyll Breakdown in Grasses. 2016, University of Zurich, Faculty of Science.

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Errafi, Sanae. Old Compounds but New Functions: Insights into Novel Modes of Action of Arabidopsis Flavonols and the Flavonol Synthase FLS1 in Modulating Cell Growth. 2016, University of Zurich, Faculty of Science.

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Jenul, C. The Role of Nitrosohydroxylamine Secondary Metabolites in Microbial Antagonism and Cell-Cell Communication in Burkholderia cenocepacia H111. 2016, University of Zurich, Faculty of Science.

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Zürcher, Evelyne. Characterization of the Arabidopsis Family of PURINE PERMEASES as Candidates for a Cytokinin Transport System. 2016, University of Zurich, Faculty of Science.

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Bätz, Ulrike. Structure and Physiological Function of the Vacuolar Anion Channel ALMT9 in Arabidopsis thaliana and Vitis Vinifera. 2016, University of Zurich, Faculty of Science.

Baumgartner, Michael. Experimental Evolution of a Freshwater Isolate with Inducible Aggregate Formation – Genome Streamlining and Variability of Phenotypic Plasticity. 2016, University of Zurich, Faculty of Science.

Faltermann, Susanne. Cellular Uptake and Effects of Cyanobacterial Toxins in Zebrafish, Danio rerio. 2016, University of Zurich, Faculty of Science.

Singla, Jyoti. Genetic Characterization and High Resolution Analysis of Lr75: a Novel Adult Plant Leaf Rust Resistance Gene in Wheat. 2016, University of Zurich, Faculty of Science.

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Zürcher, Evelyne. Characterization of the Arabidopsis family of Purine Permeases as candidates for a Cytokinin transport system. 2016, University of Zurich, Faculty of Science.

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Florez Rueda, Ana Marcela; Grossniklaus, Ueli; Schmidt, Anja (2016). Laser-assisted Microdissection (LAM) as a tool for transcriptional profiling of individual cell types. Journal of Visualized Experiments (Jove), 111:online.

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Dirren, Sebastian; Posch, Thomas (2016). Promiscuous and specific bacterial symbiont acquisition in the amoeboid genus Nuclearia (Opisthokonta). FEMS Microbiology Ecology, 92(8):fiw105.

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Bao, Kai. Novel organotypic modelling for the study of periodontal infection. 2015, University of Zurich, Faculty of Science.

Neuenschwander, Stefan. Functional Analysis of Pelagic Freshwater Microbes Based on Targeted Enrichment Approaches. 2015, University of Zurich, Faculty of Science.

Borghi, Lorenzo; Kang, Joohyun; Ko, Donghwi; Lee, Youngsook; Martinoia, Enrico (2015). The role of ABCG-type ABC transporters in phytohormone transport. Biochemical Society Transactions, 43(5):924-930.

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Mathew, Anugraha. Iron transport strategies of the genus Burkholderia. 2015, University of Zurich, Faculty of Science.

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Kohler, Esther. Structural characterization, bioactivity and biodegradation of cyanobacterial toxins. 2014, University of Zurich, Faculty of Science.

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Song, Won-Yong; Yamaki, Tomohiro; Yamaji, Naoki; Ko, Donghwi; Jung, Ki-Hong; Fujii-Kashino, Miho; An, Gynheung; Martinoia, Enrico; Lee, Youngsook; Ma, Jian Feng (2014). A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proceedings of the National Academy of Sciences of the United States of America, 111(44):15699-15704.

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Stopnisek, Nejc. Ecology of the Genus Burkholderia in the Soil. 2014, University of Zurich, Faculty of Science.

Müller, Lena Maria. The Role of Pollen Tube Reception in Reproductive Isolation. 2014, University of Zurich, Faculty of Science.

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Grob, Hanne. AtMRP5/AtABCC5 - An Inositolhexakisphosphate Transporter Interacts with Hookless 1, a Protein Involved in Ethylene Signaling. 2014, University of Zurich, Faculty of Science.

Sakuraba, Yasuhito; Lee, Sang-Hwa; Kim, Ye-Sol; Park, Ohkmae K; Hörtensteiner, Stefan; Paek, Nam-Chon (2014). Delayed degradation of chlorophylls and photosynthetic proteins in Arabidopsis autophagy mutants during stress-induced leaf yellowing. Journal of Experimental Botany, 65(14):3915-3925.

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Hurni, Severine. Molecular Analysis of the Orthologous Wheat and Rye Powdery Mildew Resistance Genes Pm3 and Pm8. 2014, University of Zurich, Faculty of Science.

Stirnweis, Daniel. Molecular and Functional Analysis of Resistance Expansion and Suppression for Alleles of the Powdery Mildew Resistance Gene Pm3 in Wheat. 2014, University of Zurich, Faculty of Science.

Schläpfer, Joëlle. Two Petunia hybrida ABCG Type Transporters: Characterization of a Strigolactone Exporter and of a Transporter Involved in Allocation of Sterol-­‐Derived Compounds Important for Herbivore Defense. 2014, University of Zurich, Faculty of Science.

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