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2014

Baresic, M; Salatino, S; Kupr, B; van Nimwegen, E; Handschin, C (2014). Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1 in the regulation of the hypoxic gene program. Molecular and Cellular Biology, 34(16):2996-3012.

2013

Simicevic, Jovan; Schmid, Adrien W; Gilardoni, Paola A; Zoller, Benjamin; Raghav, Sunil K; Krier, Irina; Gubelmann, Carinne; Lisacek, Frédérique; Naef, Felix; Moniatte, Marc; Deplancke, Bart (2013). Absolute quantification of transcription factors during cellular differentiation using multiplexed targeted proteomics. Nature Methods, 10(6):570-576.

2012

Tsuchimatsu, Takashi; Kaiser, Pascal; Yew, Chow-Lih; Bachelier, Julien B; Shimizu, Kentaro K (2012). Recent loss of self-incompatibility by degradation of the male component in allotetraploid Arabidopsis kamchatica. PLoS Genetics, 8(7):e1002838.

Fiscella, Michele; Farrow, Karl; Jones, Ian L; Jäckel, David; Müller, Jan; Frey, Urs; Bakkum, Douglas J; Hantz, Péter; Roska, Botond; Hierlemann, Andreas (2012). Recording from defined populations of retinal ganglion cells using a high-density CMOS-integrated microelectrode array with real-time switchable electrode selection. Journal of Neuroscience Methods, 211(1):103-113.

2011

Blumer, Clemens; Vivien, Cyprien; Oertner, Thomas G; Vetter, Thomas (2011). Fluorescence Image Segmentation by using Digitally Reconstructed Fluorescence Images. In: Microscopic Image Analysis with Applications in Biology, Heidelberg, Germany, 2 September 2011, s.n..

Bottier, Celine; Gabella, Chiara; Vianay, Benoît; Buscemi, Lara; Sbalzarini, Ivo F; Meister, Jean-Jacques; Verkhovsky, Alexander B (2011). Dynamic measurement of the height and volume of migrating cells by a novel fluorescence microscopy technique. Lab on a chip, 11:3855-3863.

Azzouzi, I; Moest, H; Winkler, J; Fauchère, J C; Gerber, A P; Wollscheid, B; Stoffel, M; Schmugge, M; Speer, O (2011). MicroRNA-96 directly inhibits γ-Globin expression in human erythropoiesis. PLoS ONE, 6(7):e22838.

2010

Blanchoud, Simon; Budirahardja, Yemima; Naef, Felix; Gönczy, Pierre (2010). ASSET: A Robust Algorithm for the Automated Segmentation and Standardization of Early Caenorhabditis elegans Embryos. Developmental Dynamics, 239:3285-3296.

2009

Baumgärtel, K; Tweedie-Cullen, R Y; Grossmann, J; Gehrig, P; Livingstone-Zatchej, M; Mansuy, I M (2009). Changes in the proteome after neuronal Zif268 overexpression. Journal of Proteome Research, 8(7):3298-3316.

Ramaswamy, Rajesh; González-Segredo, Nélido; Sbalzarini, Ivo F (2009). A new class of highly efficient exact stochastic simulation algorithms for chemical reaction networks. The Journal of chemical physics, 130(24):244104.