Publication:

A FAIR-Compliant Management Solution for Molecular Simulation Trajectories

Date

Date

Date
2025
Journal Article
Published version

Citations

Citation copied

Vitalis, A., Winkler, S., Zhang, Y., Widmer, J., & Caflisch, A. (2025). A FAIR-Compliant Management Solution for Molecular Simulation Trajectories. Journal of Chemical Information and Modeling, 65, 2443–2455. https://doi.org/10.1021/acs.jcim.4c01301

Abstract

Abstract

Abstract

Simulation studies of molecules primarily produce data that represent the configuration of the system as a function of the progress variable, usually time. Because of the high-dimensional nature of these data, which grow very quickly, compromises are often necessary and achieved by storing only a subset of the system's components, for example, stripping solvent, and by restricting the time resolution to a scale significantly coarser than the basic time step of the simulation. The resultant trajectories thus describe the essentially st

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2 since deposited on 2025-02-26
Acq. date: 2025-11-12

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2 since deposited on 2025-02-26
Acq. date: 2025-11-12

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Additional indexing

Creators (Authors)

  • Vitalis, Andreas
  • Winkler, Steffen
  • Widmer, Julian
  • Caflisch, Amedeo

Journal/Series Title

Journal/Series Title

Journal/Series Title

Volume

Volume

Volume
65

Number

Number

Number
5

Page range/Item number

Page range/Item number

Page range/Item number
2443

Page end

Page end

Page end
2455

Item Type

Item Type

Item Type
Journal Article

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Language

Language

Language
English

Publication date

Publication date

Publication date
2025-03-10

Date available

Date available

Date available
2025-02-26

Publisher

Publisher

Publisher

ISSN or e-ISSN

ISSN or e-ISSN

ISSN or e-ISSN
1549-9596

OA Status

OA Status

OA Status
Hybrid

PubMed ID

PubMed ID

PubMed ID

Metrics

Downloads

2 since deposited on 2025-02-26
Acq. date: 2025-11-12

Views

2 since deposited on 2025-02-26
Acq. date: 2025-11-12

Citations

Citations

Citation copied

Vitalis, A., Winkler, S., Zhang, Y., Widmer, J., & Caflisch, A. (2025). A FAIR-Compliant Management Solution for Molecular Simulation Trajectories. Journal of Chemical Information and Modeling, 65, 2443–2455. https://doi.org/10.1021/acs.jcim.4c01301

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