Publication: Using ODIN for a PharmGKB re-validation experiment
Using ODIN for a PharmGKB re-validation experiment
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Rinaldi, F., Clematide, S., Garten, Y., Whirl-Carrillo, M., Gong, L., Hebert, J. M., Sangkuhl, K., Thorn, C. F., Klein, T. E., & Altman, R. B. (2012). Using ODIN for a PharmGKB re-validation experiment. Database, 2012, bas021. https://doi.org/10.1093/database/bas021
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The need for efficient text-mining tools that support curation of the biomedical literature is ever increasing. In this article, we describe an experiment aimed at verifying whether a text-mining tool capable of extracting meaningful relationships among domain entities can be successfully integrated into the curation workflow of a major biological database. We evaluate in particular (i) the usability of the system's interface, as perceived by users, and (ii) the correlation of the ranking of interactions, as provided by the text-minin
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- Rinaldi, Fabio
- Garten, Yael
- Whirl-Carrillo, Michelle
- Gong, Li
- Hebert, Joan M
- Sangkuhl, Katrin
- Thorn, Caroline F
- Klein, Teri E
- Altman, Russ B
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Rinaldi, F., Clematide, S., Garten, Y., Whirl-Carrillo, M., Gong, L., Hebert, J. M., Sangkuhl, K., Thorn, C. F., Klein, T. E., & Altman, R. B. (2012). Using ODIN for a PharmGKB re-validation experiment. Database, 2012, bas021. https://doi.org/10.1093/database/bas021
