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Endosperm and seed transcriptomes reveal possible roles for small RNA pathways in wild tomato hybrid seed failure

Date

Date

Date
2019
Working Paper

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Florez-Rueda, A. M., Fiscalini, F., Roth, M., Grossniklaus, U., & Städler, T. (2019). Endosperm and seed transcriptomes reveal possible roles for small RNA pathways in wild tomato hybrid seed failure (No. 884387; BioRxiv). https://doi.org/10.1101/2019.12.20.884387

Abstract

Abstract

Abstract

Crosses between the wild tomato species Solanum peruvianum and S. chilense result in hybrid seed failure (HSF), characterized by endosperm misdevelopment and embryo arrest. We previously showed that genomic imprinting, the parent-of-origin–dependent expression of alleles, is perturbed in hybrid endosperm, with many of the normally paternally expressed genes losing their imprinted status. Here, we report transcriptome-based analyses of gene and small RNA expression levels. We identified 2,295 genes and 468 small RNAs (sRNAs) as differe

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37 since deposited on 2021-01-12
Acq. date: 2025-11-13

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98 since deposited on 2021-01-12
Acq. date: 2025-11-13

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Creators (Authors)

  • Florez-Rueda, Ana Marcela
  • Fiscalini, Flurin
  • Roth, Morgane
  • Grossniklaus, Ueli
  • Städler, Thomas

Series Name

Series Name

Series Name
bioRxiv

Institution

Institution

Institution

Item Type

Item Type

Item Type
Working Paper

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Language

Language

Language
English

Publication date

Publication date

Publication date
2019

Date available

Date available

Date available
2021-01-12

Number of pages

Number of pages

Number of pages
32

ISSN or e-ISSN

ISSN or e-ISSN

ISSN or e-ISSN
2164-7844

OA Status

OA Status

OA Status
Green

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Free Access at
DOI

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Downloads

37 since deposited on 2021-01-12
Acq. date: 2025-11-13

Views

98 since deposited on 2021-01-12
Acq. date: 2025-11-13

Citations

Citations

Citation copied

Florez-Rueda, A. M., Fiscalini, F., Roth, M., Grossniklaus, U., & Städler, T. (2019). Endosperm and seed transcriptomes reveal possible roles for small RNA pathways in wild tomato hybrid seed failure (No. 884387; BioRxiv). https://doi.org/10.1101/2019.12.20.884387

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