Publication: Using the OntoGene pipeline for the triage task of BioCreative 2012
Using the OntoGene pipeline for the triage task of BioCreative 2012
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Rinaldi, F., Clematide, S., Hafner, S., Schneider, G., Grigonyte, G., Romacker, M., & Vachon, T. (2013). Using the OntoGene pipeline for the triage task of BioCreative 2012. Database, 2013, bas053. https://doi.org/10.1093/database/bas053
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In this article, we describe the architecture of the OntoGene Relation mining pipeline and its application in the triage task of BioCreative 2012. The aim of the task is to support the triage of abstracts relevant to the process of curation of the Comparative Toxicogenomics Database. We use a conventional information retrieval system (Lucene) to provide a baseline ranking, which we then combine with information provided by our relation mining system, in order to achieve an optimized ranking. Our approach additionally delivers domain e
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- Rinaldi, Fabio
- Hafner, Simon
- Schneider, Gerold
- Grigonyte, Gintare
- Romacker, Martin
- Vachon, Therese
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Rinaldi, F., Clematide, S., Hafner, S., Schneider, G., Grigonyte, G., Romacker, M., & Vachon, T. (2013). Using the OntoGene pipeline for the triage task of BioCreative 2012. Database, 2013, bas053. https://doi.org/10.1093/database/bas053
