Publication:

Updated Genome Assembly and Annotation for Metrosideros polymorpha, an Emerging Model Tree Species of Ecological Divergence

Date

Date

Date
2019
Journal Article
Published version

Citations

Citation copied

Izuno, A., Wicker, T., Hatakeyama, M., Copetti, D., & Shimizu, K. K. (2019). Updated Genome Assembly and Annotation for Metrosideros polymorpha, an Emerging Model Tree Species of Ecological Divergence. G3 : Genes, Genomes, Genetics, 9(11), 3513–3520. https://doi.org/10.1534/g3.119.400643

Abstract

Abstract

Abstract

Accurate feature annotation as well as assembly contiguity are important requisites of a modern genome assembly. They allow large-scale comparison of genomes across and within species and identification of polymorphisms, leading evolutionary and functional studies. We report an updated genome resource for Metrosideros polymorpha, the most dominant tree species in the Hawaiian native forests and a unique example of rapid and remarkable ecological diversification of woody species. Ninety-one percent of the bases in the sequence assembly

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69 since deposited on 2019-09-26
Acq. date: 2025-11-08

Views

149 since deposited on 2019-09-26
Acq. date: 2025-11-08

Additional indexing

Creators (Authors)

Journal/Series Title

Journal/Series Title

Journal/Series Title

Volume

Volume

Volume
9

Number

Number

Number
11

Page Range

Page Range

Page Range
3513

Page end

Page end

Page end
3520

Item Type

Item Type

Item Type
Journal Article

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Dewey Decimal Classifikation

Keywords

Hawaii, MAKER, Metrosideros polymorpha, reannotation, transposable element

Language

Language

Language
English

Publication date

Publication date

Publication date
2019-11-01

Date available

Date available

Date available
2019-09-26

Publisher

Publisher

Publisher

ISSN or e-ISSN

ISSN or e-ISSN

ISSN or e-ISSN
2160-1836

OA Status

OA Status

OA Status
Gold

Free Access at

Free Access at

Free Access at
Pubmed ID

PubMed ID

PubMed ID

PubMed ID

Metrics

Downloads

69 since deposited on 2019-09-26
Acq. date: 2025-11-08

Views

149 since deposited on 2019-09-26
Acq. date: 2025-11-08

Citations

Citation copied

Izuno, A., Wicker, T., Hatakeyama, M., Copetti, D., & Shimizu, K. K. (2019). Updated Genome Assembly and Annotation for Metrosideros polymorpha, an Emerging Model Tree Species of Ecological Divergence. G3 : Genes, Genomes, Genetics, 9(11), 3513–3520. https://doi.org/10.1534/g3.119.400643

Gold Open Access
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Files
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