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Challenges for the implementation of next generation sequencing-based expanded carrier screening: Lessons learned from the ciliopathies

Date

Date

Date
2023
Journal Article
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Vintschger, E., Kraemer, D., Joset, P., Horn, A. H. C., Rauch, A., Sticht, H., & Bachmann-Gagescu, R. (2023). Challenges for the implementation of next generation sequencing-based expanded carrier screening: Lessons learned from the ciliopathies. European Journal of Human Genetics, 31(8), 953–961. https://doi.org/10.1038/s41431-022-01267-8

Abstract

Abstract

Abstract

Next generation sequencing (NGS) can detect carrier status for rare recessive disorders, informing couples about their reproductive risk. The recent ACMG recommendations support offering NGS-based carrier screening (NGS-CS) in an ethnic and population-neutral manner for all genes that have a carrier frequency >1/200 (based on GnomAD). To evaluate current challenges for NGS-CS, we focused on the ciliopathies, a well-studied group of rare recessive disorders. We analyzed 118 ciliopathy genes by whole exome sequencing in ~400 healthy loc

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66 since deposited on 2023-01-03
Acq. date: 2025-11-13

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172 since deposited on 2023-01-03
Acq. date: 2025-11-13

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Journal/Series Title

Volume

Volume

Volume
31

Number

Number

Number
8

Page range/Item number

Page range/Item number

Page range/Item number
953

Page end

Page end

Page end
961

Item Type

Item Type

Item Type
Journal Article

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Keywords

pregnancy outcome, risk factors, next generation sequencing, expanded carrier screening, medical genetics, NGS-CS, genetic counceling

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Language

Language
English

Publication date

Publication date

Publication date
2023-08-01

Date available

Date available

Date available
2023-01-03

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Publisher

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ISSN or e-ISSN

ISSN or e-ISSN
1018-4813

Additional Information

Additional Information

Additional Information
ACKNOWLEDGEMENTS We are thankful to all study participants. The 1958 Birth Cohort (NCDS) is managed by the Centre for Longitudinal Studies at the UCL Institute of Education, funded by the Economic and SocialResearch Council (grant ES/M001660/1). Access to these resources was enabled via the 58READIE Project, funded by Wellcome Trust and Medical Research Council (grants WT095219MA and G1001799). A full list of the financial, institutional, and personal contributions to the development of the 1958 Birth Cohort Biomedical resource is available at www.cls.ioe.ac.uk/ncds).

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OA Status
Hybrid

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Metrics

Downloads

66 since deposited on 2023-01-03
Acq. date: 2025-11-13

Views

172 since deposited on 2023-01-03
Acq. date: 2025-11-13

Citations

Citation copied

Vintschger, E., Kraemer, D., Joset, P., Horn, A. H. C., Rauch, A., Sticht, H., & Bachmann-Gagescu, R. (2023). Challenges for the implementation of next generation sequencing-based expanded carrier screening: Lessons learned from the ciliopathies. European Journal of Human Genetics, 31(8), 953–961. https://doi.org/10.1038/s41431-022-01267-8

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